hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 119358104.fa
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Query sequence: gi|119358104|ref|YP_912748.1|
Accession: [none]
Description: lipase, class 3 [Chlorobium phaeobacteroides DSM 266]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 396.4 5e-119 30
Lipase_3 Lipase (class 3) 23.6 8.8e-07 1
Acetone_carb_G Acetone carboxylase gamma subunit 16.2 0.00014 4
NAD4L NADH dehydrogenase subunit 4L (NAD4L) 9.2 0.033 1
Peptidase_M10_C Peptidase M10 serralysin C terminal 6.2 0.16 1
Amidohydro_2 Amidohydrolase 5.9 0.23 1
DRMBL DNA repair metallo-beta-lactamase 6.0 0.37 1
CbbQ_C CbbQ/NirQ/NorQ C-terminal 6.3 0.4 4
DUF320 Small secreted domain (DUF320) 4.8 1.4 3
scADH Short-chain alcohol dehydrogenase 2.1 1.5 1
Esterase Putative esterase 2.5 1.7 1
PaaX_C PaaX-like protein C-terminal domain 2.8 2.1 1
DUF1696 Protein of unknown function (DUF1696) 3.1 2.4 4
DUF2190 Uncharacterized conserved protein (DU 2.8 3 2
TFR_dimer Transferrin receptor-like dimerisatio 3.2 3.1 1
ATP-synt ATP synthase 0.4 3.2 1
TraH_2 TraH_2 0.2 3.9 1
Aminotran_1_2 Aminotransferase class I and II 1.1 4.3 1
Lactamase_B Metallo-beta-lactamase superfamily 1.8 4.4 1
GDI GDP dissociation inhibitor 0.2 4.9 1
G-patch G-patch domain 3.4 5.1 2
ASD2 Apx/Shroom domain ASD2 0.3 5.3 1
GSPII_G Bacterial type II secretion system pr 1.7 5.7 1
Orthopox_A49R Orthopoxvirus A49R protein 1.2 5.7 1
DUF2325 Uncharacterized protein conserved in 1.2 7 1
NBP1 Fungal Nap binding protein NBP1 -0.6 7.2 1
Toxin_R_bind_N Clostridium neurotoxin, N-terminal re -0.1 8.3 1
CBM_17_28 Carbohydrate binding domain (family 1 0.3 8.3 1
NosD Periplasmic copper-binding protein (N 2.3 8.9 2
VacA2 Putative vacuolating cytotoxin 1.7 9.3 1
Fib_alpha Fibrinogen alpha chain -1.1 9.4 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
ASD2 1/1 82 91 .. 294 303 .] 0.3 5.3
ATP-synt 1/1 126 154 .. 210 236 .. 0.4 3.2
TFR_dimer 1/1 195 218 .. 124 147 .] 3.2 3.1
Lactamase_B 1/1 257 294 .. 124 161 .] 1.8 4.4
PaaX_C 1/1 266 281 .. 166 181 .] 2.8 2.1
Esterase 1/1 267 301 .. 115 151 .. 2.5 1.7
Lipase_3 1/1 267 304 .. 54 104 .. 23.6 8.8e-07
Aminotran_1_2 1/1 329 347 .. 394 413 .] 1.1 4.3
CBM_17_28 1/1 336 365 .. 1 41 [. 0.3 8.3
NBP1 1/1 357 366 .. 362 371 .] -0.6 7.2
Amidohydro_2 1/1 401 436 .. 287 329 .] 5.9 0.23
Orthopox_A49R 1/1 415 426 .. 151 162 .] 1.2 5.7
VacA2 1/1 474 489 .. 41 56 .. 1.7 9.3
HemolysinCabind 1/30 492 504 .. 6 18 .] 8.1 0.28
DUF2325 1/1 513 520 .. 1 9 [. 1.2 7
HemolysinCabind 2/30 516 525 .. 9 18 .] 4.0 5
NAD4L 1/1 564 582 .. 68 86 .] 9.2 0.033
DRMBL 1/1 567 591 .. 1 25 [. 6.0 0.37
scADH 1/1 621 630 .. 384 393 .] 2.1 1.5
HemolysinCabind 3/30 642 659 .. 1 18 [] 13.9 0.005
HemolysinCabind 4/30 660 677 .. 1 18 [] 13.1 0.0082
HemolysinCabind 5/30 689 700 .. 7 18 .] 9.2 0.12
DUF1696 1/4 735 753 .. 107 125 .] 0.8 12
CbbQ_C 1/4 743 756 .. 73 86 .] 1.6 9.3
Acetone_carb_G 1/4 797 805 .. 112 120 .] 4.0 0.87
HemolysinCabind 6/30 851 863 .. 6 18 .] 4.7 2.9
HemolysinCabind 7/30 864 881 .. 1 18 [] 17.8 0.00031
DUF320 1/3 880 892 .. 48 60 .] 1.6 11
HemolysinCabind 8/30 882 899 .. 1 18 [] 13.1 0.0082
HemolysinCabind 9/30 911 922 .. 7 18 .] 9.2 0.12
DUF1696 2/4 957 975 .. 107 125 .] 0.8 12
CbbQ_C 2/4 965 978 .. 73 86 .] 1.6 9.3
Acetone_carb_G 2/4 1019 1027 .. 112 120 .] 4.0 0.87
HemolysinCabind 10/30 1073 1085 .. 6 18 .] 4.7 2.9
HemolysinCabind 11/30 1086 1103 .. 1 18 [] 17.8 0.00031
DUF320 2/3 1102 1114 .. 48 60 .] 1.6 11
HemolysinCabind 12/30 1104 1121 .. 1 18 [] 13.1 0.0082
HemolysinCabind 13/30 1133 1144 .. 7 18 .] 9.2 0.12
DUF1696 3/4 1179 1197 .. 107 125 .] 0.8 12
CbbQ_C 3/4 1187 1200 .. 73 86 .] 1.6 9.3
Acetone_carb_G 3/4 1241 1249 .. 112 120 .] 4.0 0.87
HemolysinCabind 14/30 1295 1307 .. 6 18 .] 4.7 2.9
HemolysinCabind 15/30 1308 1325 .. 1 18 [] 17.8 0.00031
DUF320 3/3 1324 1336 .. 48 60 .] 1.6 11
HemolysinCabind 16/30 1326 1343 .. 1 18 [] 13.1 0.0082
HemolysinCabind 17/30 1355 1366 .. 7 18 .] 9.2 0.12
DUF1696 4/4 1401 1419 .. 107 125 .] 0.8 12
CbbQ_C 4/4 1409 1422 .. 73 86 .] 1.6 9.3
Acetone_carb_G 4/4 1463 1471 .. 112 120 .] 4.0 0.87
Peptidase_M10_C 1/1 1481 2133 .] 70 166 .] 6.2 0.16
HemolysinCabind 18/30 1521 1538 .. 1 18 [] 19.2 0.00012
HemolysinCabind 19/30 1539 1556 .. 1 18 [] 13.1 0.0083
G-patch 1/2 1611 1620 .. 1 10 [. 1.7 16
HemolysinCabind 20/30 1620 1637 .. 1 18 [] 22.3 1.4e-05
HemolysinCabind 21/30 1638 1655 .. 1 18 [] 11.6 0.024
GDI 1/1 1657 1681 .. 452 476 .] 0.2 4.9
G-patch 2/2 1710 1719 .. 1 10 [. 1.7 16
HemolysinCabind 22/30 1719 1736 .. 1 18 [] 18.5 0.00019
HemolysinCabind 23/30 1737 1754 .. 1 18 [] 14.9 0.0024
NosD 1/2 1739 1762 .. 35 65 .. 1.1 18
DUF2190 1/2 1805 1819 .. 78 92 .. 0.8 12
Toxin_R_bind_N 1/1 1805 1818 .. 1 14 [. -0.1 8.3
HemolysinCabind 24/30 1809 1826 .. 1 18 [] 21.1 3.1e-05
HemolysinCabind 25/30 1827 1844 .. 1 18 [] 17.4 0.00043
GSPII_G 1/1 1831 1848 .. 96 114 .] 1.7 5.7
Fib_alpha 1/1 1882 1913 .. 463 497 .] -1.1 9.4
DUF2190 2/2 1895 1909 .. 78 92 .. 2.0 5.4
HemolysinCabind 26/30 1899 1916 .. 1 18 [] 20.2 6e-05
HemolysinCabind 27/30 1917 1934 .. 1 18 [] 14.9 0.0024
NosD 2/2 1919 1942 .. 35 65 .. 1.1 18
HemolysinCabind 28/30 1980 1997 .. 1 18 [] 4.5 3.5
HemolysinCabind 29/30 1998 2015 .. 1 18 [] 18.2 0.00024
HemolysinCabind 30/30 2016 2033 .. 1 18 [] 17.6 0.00037
TraH_2 1/1 2060 2068 .. 201 209 .] 0.2 3.9
Alignments of top-scoring domains:
ASD2: domain 1 of 1, from 82 to 91: score 0.3, E = 5.3
*->EQLkcLrdsL<-*
EQL ++ +sL
gi|1193581 82 EQLNAIGNSL 91
ATP-synt: domain 1 of 1, from 126 to 154: score 0.4, E = 3.2
CS ..-SGGGG................ . ..
*->AaedesfrlttkgGdFeVERetet.t.ed<-*
Aa+d++ + +++gGd + ER+t + ++++
gi|1193581 126 AASDDVTGSASSGGDWKLERQTGViEtAP 154
TFR_dimer: domain 1 of 1, from 195 to 218: score 3.2, E = 3.1
CS HHHHHHHHHHHHHHHHHHHHHS--
*->aevqrQlsiaataLqgaAntLrev<-*
+e+ +Ql ++++L+g A++ +++
gi|1193581 195 GELNNQLQWIGWSLHGEARYHAFD 218
Lactamase_B: domain 1 of 1, from 257 to 294: score 1.8, E = 4.4
CS HHHHHCTTHSEETEHHHHHHHHHHHHTS..SEEEE.SS
*->klpggdaktlypslaelllesleklaalppdtivpPgH<-*
+++g ++ +y s +++ ++l++++a ++d i+ gH
gi|1193581 257 DIVGYGFSLYYRSVRAEVVAWLKEAVAEKYDAIYITGH 294
PaaX_C: domain 1 of 1, from 266 to 281: score 2.8, E = 2.1
*->lyreLaaaaeqflaev<-*
+yr+++a++ ++l+e+
gi|1193581 266 YYRSVRAEVVAWLKEA 281
Esterase: domain 1 of 1, from 267 to 301: score 2.5, E = 1.7
CS HHHHHTHHHHHHHHHH-B-SSS-BEEEEEETHHHHHH
*->YtfltqELlPlldanfptapdgdrravaGqSmGGlgA<-*
Y+ ++ E++ +l++ + d+ ++G+S+GG +A
gi|1193581 267 YRSVRAEVVAWLKEAVAEKYDA--IYITGHSLGGAAA 301
Lipase_3: domain 1 of 1, from 267 to 304: score 23.6, E = 8.8e-07
CS HH.........HHHHHHHHHHHH.HHHHST..TSEEEEEEETHHHHH
*->ytskdqskfktsvrdqileelkrhLlekypdEdykivvTGHSLGGAl
y+ svr ++ + lk+++ eky i++TGHSLGGA
gi|1193581 267 YR---------SVRAEVVAWLKEAVAEKYD----AIYITGHSLGGAA 300
CS HHHH
AsLa<-*
A +a
gi|1193581 301 AQIA 304
Aminotran_1_2: domain 1 of 1, from 329 to 347: score 1.1, E = 4.3
CS EEEC-TSS-HHHHHHHHHHH
*->RitvtAggteeeleelleai<-*
Rit Ag+t+eel ++ ++i
gi|1193581 329 RITD-AGLTSEELSYVRSHI 347
CBM_17_28: domain 1 of 1, from 336 to 365: score 0.3, E = 8.3
CS ---GGGB-HHHHHHHHHHHT-----......--S-..S--T
*->VWapeELSvSGEYVRARIKGieYePikrdnkIdrtekeeft<-*
eELS YVR+ I G+ + d++Id++ +++
gi|1193581 336 --TSEELS----YVRSHISGATFGA--PDVRIDPS---KYS 365
NBP1: domain 1 of 1, from 357 to 366: score -0.6, E = 7.2
*->vrvDYSkYsS<-*
vr+D SkYs
gi|1193581 357 VRIDPSKYSA 366
Amidohydro_2: domain 1 of 1, from 401 to 436: score 5.9, E = 0.23
CS T-TT- TT--HHHHHHHHHHH--..-HHHHHHHHTHHHHHHTT-
*->Phppl.rslaalllldlllllllelseeerekilggNAarlygl<-*
P+ l+++++ +++ dl se+++++ g N+ +++
gi|1193581 401 PVAALgGEIGQFVAIDL--------SEDIKDRYWGLNPIAFLHS 436
Orthopox_A49R: domain 1 of 1, from 415 to 426: score 1.2, E = 5.7
*->LqLsdDiRERYL<-*
+ Ls+Di++RY
gi|1193581 415 IDLSEDIKDRYW 426
VacA2: domain 1 of 1, from 474 to 489: score 1.7, E = 9.3
*->naannininnAtinns<-*
++ ++i++++A++n++
gi|1193581 474 EGNDRIVLTQAKFNAQ 489
HemolysinCabind: domain 1 of 30, from 492 to 504: score 8.1, E = 0.28
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
nD+L+ aGnD+l
gi|1193581 492 NDRLNAFAGNDIL 504
DUF2325: domain 1 of 1, from 513 to 520: score 1.2, E = 7
*->MSvLiVGAD<-*
S+Li+G+D
gi|1193581 513 -SALIIGGD 520
HemolysinCabind: domain 2 of 30, from 516 to 525: score 4.0, E = 5
CS EEEESSCGEE
*->LyGgaGnDtl<-*
+ Gg+G Dt+
gi|1193581 516 IIGGDGHDTY 525
NAD4L: domain 1 of 1, from 564 to 582: score 9.2, E = 0.033
*->LvVLTRvwecsSlielVgf<-*
LvVL ++++ sS +e Vg+
gi|1193581 564 LVVLITNYDESSRVEIVGW 582
DRMBL: domain 1 of 1, from 567 to 591: score 6.0, E = 0.37
*->vlTtdesesriHavpmnsieesfki<-*
++T ++++sr+ +v ++s ee++ i
gi|1193581 567 LITNYDESSRVEIVGWYSSEETYRI 591
scADH: domain 1 of 1, from 621 to 630: score 2.1, E = 1.5
*->ldgVDYsqDV<-*
++g DYs DV
gi|1193581 621 REGLDYSDDV 630
HemolysinCabind: domain 3 of 30, from 642 to 659: score 13.9, E = 0.005
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +GnDt+ G +G+D +
gi|1193581 642 NGYGGNDTMEGRGGDDEI 659
HemolysinCabind: domain 4 of 30, from 660 to 677: score 13.1, E = 0.0082
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnDt + g+G+Dt
gi|1193581 660 NPGGGNDTVDAGSGDDTV 677
HemolysinCabind: domain 5 of 30, from 689 to 700: score 9.2, E = 0.12
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
D+L+Gg+G Dtl
gi|1193581 689 DVLDGGSGTDTL 700
DUF1696: domain 1 of 4, from 735 to 753: score 0.8, E = 12
*->FkkdtniyeiqkvLAkyvL<-*
+ +++++++iq++L+++v
gi|1193581 735 LASGSSLNDIQTALSTAVK 753
CbbQ_C: domain 1 of 4, from 743 to 756: score 1.6, E = 9.3
*->dvreaLmeviaayF<-*
d++ aL +++++F
gi|1193581 743 DIQTALSTAVKTVF 756
Acetone_carb_G: domain 1 of 4, from 797 to 805: score 4.0, E = 0.87
*->dglyrdWlg<-*
d++y+dW g
gi|1193581 797 DTFYADWSG 805
HemolysinCabind: domain 6 of 30, from 851 to 863: score 4.7, E = 2.9
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
nD + gaGnDt+
gi|1193581 851 NDDVRTGAGNDTI 863
HemolysinCabind: domain 7 of 30, from 864 to 881: score 17.8, E = 0.00031
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G GnD ++GgaGnD+l
gi|1193581 864 SVGWGNDYIDGGAGNDVL 881
DUF320: domain 1 of 3, from 880 to 892: score 1.6, E = 11
*->llNPAfGNeCand<-*
+lNP GN+ +++
gi|1193581 880 VLNPGGGNDTVDA 892
HemolysinCabind: domain 8 of 30, from 882 to 899: score 13.1, E = 0.0082
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnDt + g+G+Dt
gi|1193581 882 NPGGGNDTVDAGSGDDTV 899
HemolysinCabind: domain 9 of 30, from 911 to 922: score 9.2, E = 0.12
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
D+L+Gg+G Dtl
gi|1193581 911 DVLDGGSGTDTL 922
DUF1696: domain 2 of 4, from 957 to 975: score 0.8, E = 12
*->FkkdtniyeiqkvLAkyvL<-*
+ +++++++iq++L+++v
gi|1193581 957 LASGSSLNDIQTALSTAVK 975
CbbQ_C: domain 2 of 4, from 965 to 978: score 1.6, E = 9.3
*->dvreaLmeviaayF<-*
d++ aL +++++F
gi|1193581 965 DIQTALSTAVKTVF 978
Acetone_carb_G: domain 2 of 4, from 1019 to 1027: score 4.0, E = 0.87
*->dglyrdWlg<-*
d++y+dW g
gi|1193581 1019 DTFYADWSG 1027
HemolysinCabind: domain 10 of 30, from 1073 to 1085: score 4.7, E = 2.9
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
nD + gaGnDt+
gi|1193581 1073 NDDVRTGAGNDTI 1085
HemolysinCabind: domain 11 of 30, from 1086 to 1103: score 17.8, E = 0.00031
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G GnD ++GgaGnD+l
gi|1193581 1086 SVGWGNDYIDGGAGNDVL 1103
DUF320: domain 2 of 3, from 1102 to 1114: score 1.6, E = 11
*->llNPAfGNeCand<-*
+lNP GN+ +++
gi|1193581 1102 VLNPGGGNDTVDA 1114
HemolysinCabind: domain 12 of 30, from 1104 to 1121: score 13.1, E = 0.0082
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnDt + g+G+Dt
gi|1193581 1104 NPGGGNDTVDAGSGDDTV 1121
HemolysinCabind: domain 13 of 30, from 1133 to 1144: score 9.2, E = 0.12
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
D+L+Gg+G Dtl
gi|1193581 1133 DVLDGGSGTDTL 1144
DUF1696: domain 3 of 4, from 1179 to 1197: score 0.8, E = 12
*->FkkdtniyeiqkvLAkyvL<-*
+ +++++++iq++L+++v
gi|1193581 1179 LASGSSLNDIQTALSTAVK 1197
CbbQ_C: domain 3 of 4, from 1187 to 1200: score 1.6, E = 9.3
*->dvreaLmeviaayF<-*
d++ aL +++++F
gi|1193581 1187 DIQTALSTAVKTVF 1200
Acetone_carb_G: domain 3 of 4, from 1241 to 1249: score 4.0, E = 0.87
*->dglyrdWlg<-*
d++y+dW g
gi|1193581 1241 DTFYADWSG 1249
HemolysinCabind: domain 14 of 30, from 1295 to 1307: score 4.7, E = 2.9
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
nD + gaGnDt+
gi|1193581 1295 NDDVRTGAGNDTI 1307
HemolysinCabind: domain 15 of 30, from 1308 to 1325: score 17.8, E = 0.00031
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G GnD ++GgaGnD+l
gi|1193581 1308 SVGWGNDYIDGGAGNDVL 1325
DUF320: domain 3 of 3, from 1324 to 1336: score 1.6, E = 11
*->llNPAfGNeCand<-*
+lNP GN+ +++
gi|1193581 1324 VLNPGGGNDTVDA 1336
HemolysinCabind: domain 16 of 30, from 1326 to 1343: score 13.1, E = 0.0082
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnDt + g+G+Dt
gi|1193581 1326 NPGGGNDTVDAGSGDDTV 1343
HemolysinCabind: domain 17 of 30, from 1355 to 1366: score 9.2, E = 0.12
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
D+L+Gg+G Dtl
gi|1193581 1355 DVLDGGSGTDTL 1366
DUF1696: domain 4 of 4, from 1401 to 1419: score 0.8, E = 12
*->FkkdtniyeiqkvLAkyvL<-*
+ +++++++iq++L+++v
gi|1193581 1401 LASGSSLNDIQTALSTAVK 1419
CbbQ_C: domain 4 of 4, from 1409 to 1422: score 1.6, E = 9.3
*->dvreaLmeviaayF<-*
d++ aL +++++F
gi|1193581 1409 DIQTALSTAVKTVF 1422
Acetone_carb_G: domain 4 of 4, from 1463 to 1471: score 4.0, E = 0.87
*->dglyrdWlg<-*
d++y+dW g
gi|1193581 1463 DTFYADWSG 1471
Peptidase_M10_C: domain 1 of 1, from 1481 to 2133: score 6.2, E = 0.16
CS BS-EEE-TT----EE
RF xxxxxxxxxxxxxxx
*->kgnvsiAkGvtiEnA................................
+g+ i +Gvt+ n ++ +++++ + +++ +++++ +++ +++
gi|1193581 1481 TGEAYIYEGVTVSNVerlllqtgsgadvidntafstnddvrtgagdd 1527
CS
RF
..................................................
++ +++ +++++ ++ ++ ++++ + + + +++ +++++ +
gi|1193581 1528 allggagndildggsgadsmaggigddtyvvnysldvvtenadegtdlvk 1577
CS
RF
..................................................
++++ + +++ ++ + +++ ++++++++ +++ +++ +++ ++ ++++
gi|1193581 1578 sstswtlgdhvehleltgtantrgtgneldnritgnigsnmlagdagkdt 1627
CS
RF
..................................................
++ ++++ +++++ ++ ++ ++++ ++ + ++ +++++ ++
gi|1193581 1628 llggagndtldggtgadsmaggigddtyvvddildvvteyagegtdlvks 1677
CS
RF
..................................................
+++ + +++ ++ + +++ ++++++++ +++ +++ +++ ++ ++++
gi|1193581 1678 stswtlgdhvehlelsgtantrgtgneldnritgnigsnmlagdagkdtl 1727
CS
RF
..................................................
++ +++ +++++ ++ ++ ++++ + + + +++ +++ + +++
gi|1193581 1728 lggagndaldggsgadsmvggigddtyvvnysldvvtenadegidlvqss 1777
CS
RF
..................................................
++ + + + ++ + +++ ++++++++ +++ ++++++++ ++ ++++ +
gi|1193581 1778 tgwtlganvehleltgtantrgtgneldnritgnsgkntlvggagndtld 1827
CS
RF
..................................................
++++ ++ ++++++ + + + +++ +++ + +++++ + + + +
gi|1193581 1828 ggsgadsmaggegddvyvvnysldvvtenadegidlvqsstgwtlganve 1877
CS
RF
..................................................
+ + +++ ++++++++ +++ ++++++++ ++ ++++ +++++ ++ +
gi|1193581 1878 nleltgtantrgtgndldnritgnsgkntliggagndtldggsgadsmvg 1927
CS
RF
..................................................
+ ++++ + + + +++ +++ + +++++ + + + ++ + +++ ++
gi|1193581 1928 gigddtyvvnysldvvtenadegidlvqsstgwtlganvehleltgtant 1977
CS
RF
..................................................
++++++ ++ +++++++ ++++++ ++ + ++ ++ + ++ +++
gi|1193581 1978 rgtgndldnvitgnsgknylageegedillggagadtlyggmgadeltgg 2027
CS TTB-EEETT--TTTSEEE-HHHHHHHT SE
RF xxxxxxxxxxxxxxxxxxxxxxxxxxx xx
.................saapdtirDFqsGeDkiDlsalnkgak....lk
++++ +++++++ ++ a d i+DF+ G D++Dls ++++ ++ +
gi|1193581 2028 tgrdvflynnssesgitEGAWDVITDFTAGFDRLDLSGIDANTGiagnQS 2077
CS E-SSB-SSTTEE EEEEETTTTEEEEEEESSSSSS-SEEEEE ES-
RF xxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxx
fvdaftGkagea....llsydaesnvtdlaldlsgkeaadFlvki..vGq
f +++ G+++ ++ + l++d+ s v l+ + +g++ a+F++k +++G
gi|1193581 2078 FSSDILGSGDAFseagQLRFDSGSGV--LYGNTDGDADAEFAIKFtgIGS 2125
CS --GTGGEE-
RF xxxxxxxxx
aavasDiiv<-*
+ sDi++
gi|1193581 2126 MSS-SDIVL 2133
HemolysinCabind: domain 18 of 30, from 1521 to 1538: score 19.2, E = 0.00012
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ GaG+D L GgaGnD+l
gi|1193581 1521 RTGAGDDALLGGAGNDIL 1538
HemolysinCabind: domain 19 of 30, from 1539 to 1556: score 13.1, E = 0.0083
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D++ Gg G+Dt+
gi|1193581 1539 DGGSGADSMAGGIGDDTY 1556
G-patch: domain 1 of 2, from 1611 to 1620: score 1.7, E = 16
*->tsniGfklLq<-*
t+niG+ +L+
gi|1193581 1611 TGNIGSNMLA 1620
HemolysinCabind: domain 20 of 30, from 1620 to 1637: score 22.3, E = 1.4e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+aG DtL GgaGnDtl
gi|1193581 1620 AGDAGKDTLLGGAGNDTL 1637
HemolysinCabind: domain 21 of 30, from 1638 to 1655: score 11.6, E = 0.024
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D++ Gg G+Dt+
gi|1193581 1638 DGGTGADSMAGGIGDDTY 1655
GDI: domain 1 of 1, from 1657 to 1681: score 0.2, E = 4.9
CS HHHHHHHHHHHHSS-----------
*->cnDVldIykrltGkaldlskspake<-*
++D+ld+ ++++G+ dl ks +++
gi|1193581 1657 VDDILDVVTEYAGEGTDLVKSSTSW 1681
G-patch: domain 2 of 2, from 1710 to 1719: score 1.7, E = 16
*->tsniGfklLq<-*
t+niG+ +L+
gi|1193581 1710 TGNIGSNMLA 1719
HemolysinCabind: domain 22 of 30, from 1719 to 1736: score 18.5, E = 0.00019
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+aG DtL GgaGnD l
gi|1193581 1719 AGDAGKDTLLGGAGNDAL 1736
HemolysinCabind: domain 23 of 30, from 1737 to 1754: score 14.9, E = 0.0024
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D++ Gg G+Dt+
gi|1193581 1737 DGGSGADSMVGGIGDDTY 1754
NosD: domain 1 of 2, from 1739 to 1762: score 1.1, E = 18
*->gtGFSqtcvntDlDgDGIgDtpYnippngni<-*
g+G D++ GIgD Y ++ + +
gi|1193581 1739 GSG-------ADSMVGGIGDDTYVVNYSLDV 1762
DUF2190: domain 1 of 2, from 1805 to 1819: score 0.8, E = 12
*->ekvvtttAtgNtliG<-*
++++t+++++Ntl+G
gi|1193581 1805 DNRITGNSGKNTLVG 1819
Toxin_R_bind_N: domain 1 of 1, from 1805 to 1818: score -0.1, E = 8.3
CS TEEEETSSSEEEEE
*->nNvliDiSGYnalV<-*
+N++ SG+n+lV
gi|1193581 1805 DNRITGNSGKNTLV 1818
HemolysinCabind: domain 24 of 30, from 1809 to 1826: score 21.1, E = 3.1e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ G +tL GgaGnDtl
gi|1193581 1809 TGNSGKNTLVGGAGNDTL 1826
HemolysinCabind: domain 25 of 30, from 1827 to 1844: score 17.4, E = 0.00043
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D++ Gg+G+D++
gi|1193581 1827 DGGSGADSMAGGEGDDVY 1844
GSPII_G: domain 1 of 1, from 1831 to 1848: score 1.7, E = 5.7
CS TTTS--...EEE--.TT-E
*->GaDGqpGGeGtdaDpIgnW<-*
GaD +GGeG+d ++n
gi|1193581 1831 GADSMAGGEGDDVY-VVNY 1848
Fib_alpha: domain 1 of 1, from 1882 to 1913: score -1.1, E = 9.4
CS X.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
*->tvggltstntfneqdlGkfvtgkaeeDlpdfqaRs<-*
t g+ +++t+n dl tg++ ++++++ a+
gi|1193581 1882 T-GTANTRGTGN--DLDNRITGNSGKNTLIGGAGN 1913
DUF2190: domain 2 of 2, from 1895 to 1909: score 2.0, E = 5.4
*->ekvvtttAtgNtliG<-*
++++t+++++NtliG
gi|1193581 1895 DNRITGNSGKNTLIG 1909
HemolysinCabind: domain 26 of 30, from 1899 to 1916: score 20.2, E = 6e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ G +tL GgaGnDtl
gi|1193581 1899 TGNSGKNTLIGGAGNDTL 1916
HemolysinCabind: domain 27 of 30, from 1917 to 1934: score 14.9, E = 0.0024
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D++ Gg G+Dt+
gi|1193581 1917 DGGSGADSMVGGIGDDTY 1934
NosD: domain 2 of 2, from 1919 to 1942: score 1.1, E = 18
*->gtGFSqtcvntDlDgDGIgDtpYnippngni<-*
g+G D++ GIgD Y ++ + +
gi|1193581 1919 GSG-------ADSMVGGIGDDTYVVNYSLDV 1942
HemolysinCabind: domain 28 of 30, from 1980 to 1997: score 4.5, E = 3.5
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++ +++++G++G + l
gi|1193581 1980 TGNDLDNVITGNSGKNYL 1997
HemolysinCabind: domain 29 of 30, from 1998 to 2015: score 18.2, E = 0.00024
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G +G D+L GgaG+Dtl
gi|1193581 1998 AGEEGEDILLGGAGADTL 2015
HemolysinCabind: domain 30 of 30, from 2016 to 2033: score 17.6, E = 0.00037
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yGG G D L+Gg G D++
gi|1193581 2016 YGGMGADELTGGTGRDVF 2033
TraH_2: domain 1 of 1, from 2060 to 2068: score 0.2, E = 3.9
*->RIDLSgIGa<-*
R DLSgI a
gi|1193581 2060 RLDLSGIDA 2068
//