hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 119484508.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query sequence: gi|119484508|ref|ZP_01619125.1|
Accession: [none]
Description: hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
LVIVD LVIVD repeat 332.6 7.8e-97 7
HemolysinCabind Hemolysin-type calcium-binding repeat 226.6 1.6e-67 13
Cadherin Cadherin domain 63.8 1.4e-17 2
Trypan_PARP Procyclic acidic repetitive protein ( 29.0 3.1e-07 3
Big_1 Bacterial Ig-like domain (group 1) 7.5 0.057 1
Monooxygenase_B Monooxygenase subunit B protein 6.9 0.073 1
DUF1177 Protein of unknown function (DUF1177) 6.3 0.11 1
Y_Y_Y Y_Y_Y domain 7.7 0.14 2
DUF1292 Protein of unknown function (DUF1292) 6.3 0.36 2
VPEP PEP-CTERM motif 7.4 0.41 5
YSIRK_signal YSIRK type signal peptide 7.5 0.5 2
FlgD Flagellar hook capping protein 4.4 0.64 2
COPI_assoc COPI associated protein 4.1 1.2 1
5_3_exonuc_N 5'-3' exonuclease, N-terminal resolva 2.9 1.7 1
Nucleos_tra2_N Na+ dependent nucleoside transporter 3.8 2 1
Ldl_recept_b Low-density lipoprotein receptor repe 4.2 2.2 1
KOW KOW motif 5.2 2.4 2
DUF2010 Protein of unknown function 2.4 2.5 1
FRG1 FRG1-like family -0.5 3.1 1
Kelch_1 Kelch motif 4.1 3.1 2
Beta_propel Beta propeller domain 0.4 3.3 1
DUF1983 Domain of unknown function (DUF1983) 2.5 3.5 2
DNA_primase_S Eukaryotic and archaeal DNA primase s 1.8 3.5 1
DUF1314 Protein of unknown function (DUF1314) 1.3 4 1
REJ REJ domain 0.3 4.1 1
Virul_Fac Uncharacterized protein conserved in -0.2 4.8 1
DUF2237 Uncharacterized protein conserved in 2.9 4.8 1
Rz1 Lipoprotein Rz1 precursor 2.8 5 1
DUF2071 Uncharacterized conserved protein (CO 1.0 5.1 1
Reg_prop Two component regulator propeller 5.2 5.8 1
Flavokinase Riboflavin kinase 2.0 5.9 1
CBM_2 Cellulose binding domain 1.7 6.1 1
Secretin Bacterial type II and III secretion s 1.0 6.3 1
Pox_ser-thr_kin Poxvirus serine/threonine protein kin 0.2 6.5 1
AP_endonuc_2 Xylose isomerase-like TIM barrel 0.4 8.1 1
A2M_N Alpha-2-macroglobulin family N-termin -0.1 8.5 1
DUF2397 Protein of unknown function (DUF2397) -1.1 8.8 1
DUF2135 Uncharacterized protein conserved in 2.2 9.1 1
Big_2 Bacterial Ig-like domain (group 2) 1.4 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
5_3_exonuc_N 1/1 30 38 .. 1 9 [. 2.9 1.7
Flavokinase 1/1 48 63 .. 69 85 .. 2.0 5.9
DUF2397 1/1 51 75 .. 219 243 .. -1.1 8.8
Secretin 1/1 52 67 .. 1 16 [. 1.0 6.3
DUF1314 1/1 75 88 .. 176 189 .] 1.3 4
DUF2237 1/1 100 108 .. 106 114 .] 2.9 4.8
REJ 1/1 202 223 .. 393 414 .. 0.3 4.1
AP_endonuc_2 1/1 332 361 .. 1 29 [. 0.4 8.1
DUF2010 1/1 364 377 .. 158 171 .. 2.4 2.5
DUF2071 1/1 456 465 .. 1 10 [. 1.0 5.1
DUF1177 1/1 485 507 .. 258 280 .] 6.3 0.11
Reg_prop 1/1 558 581 .. 1 23 [] 5.2 5.8
DNA_primase_S 1/1 589 609 .. 1 25 [. 1.8 3.5
Big_2 1/1 685 706 .. 68 90 .] 1.4 10
Big_1 1/1 691 711 .. 18 38 .. 7.5 0.057
Rz1 1/1 737 746 .. 53 62 .] 2.8 5
LVIVD 1/7 787 817 .. 1 31 [. 32.8 1.1e-08
FRG1 1/1 800 809 .. 1 11 [. -0.5 3.1
DUF2135 1/1 818 832 .. 7 21 .. 2.2 9.1
LVIVD 2/7 835 876 .. 1 42 [] 69.6 2e-19
LVIVD 3/7 877 907 .. 1 31 [. 42.2 2e-11
LVIVD 4/7 920 966 .. 1 42 [] 51.3 4.4e-14
KOW 1/2 929 945 .. 1 17 [. 3.9 5.9
Monooxygenase_B 1/1 948 961 .. 375 388 .] 6.9 0.073
Kelch_1 1/2 974 994 .. 1 21 [. 1.2 20
LVIVD 5/7 974 1020 .. 1 42 [] 44.7 3.5e-12
KOW 2/2 983 999 .. 1 17 [. 1.4 30
Kelch_1 2/2 1021 1042 .. 1 22 [. 2.9 7
LVIVD 6/7 1021 1062 .. 1 42 [] 58.2 4.1e-16
CBM_2 1/1 1049 1062 .. 94 106 .] 1.7 6.1
LVIVD 7/7 1063 1092 .. 1 31 [. 33.8 5.3e-09
Beta_propel 1/1 1072 1093 .. 710 731 .] 0.4 3.3
Cadherin 1/2 1108 1196 .. 1 107 [] 33.2 8.3e-09
Virul_Fac 1/1 1111 1122 .. 899 910 .] -0.2 4.8
FlgD 1/2 1114 1159 .. 113 155 .] 2.3 2.8
DUF1983 1/2 1155 1187 .. 1 32 [. 1.2 9
YSIRK_signal 1/2 1167 1176 .. 1 10 [. 3.7 5.9
Y_Y_Y 1/2 1172 1196 .. 42 69 .] 4.0 1.8
DUF1292 1/2 1180 1196 .. 1 17 [. 1.3 10
COPI_assoc 1/1 1196 1218 .. 127 150 .] 4.1 1.2
Ldl_recept_b 1/1 1200 1210 .. 37 47 .] 4.2 2.2
Cadherin 2/2 1208 1296 .. 1 107 [] 30.6 4.7e-08
FlgD 2/2 1219 1259 .. 117 155 .] 2.1 3.5
DUF1983 2/2 1255 1287 .. 1 32 [. 1.2 9
YSIRK_signal 2/2 1267 1276 .. 1 10 [. 3.7 5.9
A2M_N 1/1 1272 1293 .. 248 269 .. -0.1 8.5
Y_Y_Y 2/2 1272 1294 .. 42 69 .] 3.7 2.3
DUF1292 2/2 1280 1299 .. 1 20 [. 5.0 0.85
Trypan_PARP 1/3 1288 1367 .. 45 122 .. 25.1 3.3e-06
Trypan_PARP 2/3 1368 1420 .. 63 115 .. 0.9 9.2
Trypan_PARP 3/3 1422 1475 .. 65 120 .. 3.0 2.5
VPEP 1/5 1447 1455 .. 1 10 [. 1.5 22
VPEP 2/5 1463 1471 .. 1 10 [. 1.5 22
VPEP 3/5 1479 1487 .. 1 10 [. 1.5 22
VPEP 4/5 1495 1503 .. 1 10 [. 1.5 22
VPEP 5/5 1511 1519 .. 1 10 [. 1.5 22
HemolysinCabind 1/13 1576 1593 .. 1 18 [] 5.4 1.8
HemolysinCabind 2/13 1594 1611 .. 1 18 [] 14.6 0.003
Pox_ser-thr_kin 1/1 1594 1616 .. 1 24 [. 0.2 6.5
HemolysinCabind 3/13 1612 1629 .. 1 18 [] 17.4 0.00041
HemolysinCabind 4/13 1630 1647 .. 1 18 [] 19.3 0.00011
HemolysinCabind 5/13 1648 1665 .. 1 18 [] 18.6 0.00017
HemolysinCabind 6/13 1666 1683 .. 1 18 [] 12.6 0.012
HemolysinCabind 7/13 1684 1701 .. 1 18 [] 11.5 0.026
HemolysinCabind 8/13 1702 1719 .. 1 18 [] 19.9 7.4e-05
HemolysinCabind 9/13 1720 1737 .. 1 18 [] 20.0 7e-05
HemolysinCabind 10/13 1738 1755 .. 1 18 [] 23.6 5.4e-06
HemolysinCabind 11/13 1756 1773 .. 1 18 [] 21.6 2.2e-05
Nucleos_tra2_N 1/1 1757 1769 .. 70 82 .] 3.8 2
HemolysinCabind 12/13 1774 1791 .. 1 18 [] 21.8 1.9e-05
HemolysinCabind 13/13 1792 1809 .. 1 18 [] 20.4 5.3e-05
Alignments of top-scoring domains:
5_3_exonuc_N: domain 1 of 1, from 30 to 38: score 2.9, E = 1.7
*->kkLlLiDGn<-*
++L++iDGn
gi|1194845 30 NTLVFIDGN 38
Flavokinase: domain 1 of 1, from 48 to 63: score 2.0, E = 5.9
CS --S-EEEEEEETT--S-
*->ggkkltiEvHllDFdgD<-*
g k+ iEvH+lD d+D
gi|1194845 48 G-VKPEIEVHILDIDRD 63
DUF2397: domain 1 of 1, from 51 to 75: score -1.1, E = 8.8
*->pkIaalLrelepdgverlldraaer<-*
p+I+ ++ ++++dg+e+++ ++ +r
gi|1194845 51 PEIEVHILDIDRDGIEQITAHLFTR 75
Secretin: domain 1 of 1, from 52 to 67: score 1.0, E = 6.3
*->lIearIvEvslsdlqe<-*
+Ie+ I +++++ +++
gi|1194845 52 EIEVHILDIDRDGIEQ 67
DUF1314: domain 1 of 1, from 75 to 88: score 1.3, E = 4
*->rPtvsnsrilakGS<-*
rP v +i+++GS
gi|1194845 75 RPHVESVHIISHGS 88
DUF2237: domain 1 of 1, from 100 to 108: score 2.9, E = 4.8
*->pLevLkahA<-*
+L++Lk++A
gi|1194845 100 SLDTLKRYA 108
REJ: domain 1 of 1, from 202 to 223: score 0.3, E = 4.1
*->edePLtYkiivsrlrsVgDWei<-*
++ P +Y + v+rl +VgDW i
gi|1194845 202 SEGPPLYRLAVNRLTDVGDWVI 223
AP_endonuc_2: domain 1 of 1, from 332 to 361: score 0.4, E = 8.1
CS HHHHHHHTSSEEEEEHHCHS HCHHHHHHH
*->laaaaeaGfdgvElffddpr.asleelkal<-*
+ a + G+dg El+ d+ ++e+++l
gi|1194845 332 FFTANSDGIDGLELWVSDGTfEAAREIREL 361
DUF2010: domain 1 of 1, from 364 to 377: score 2.4, E = 2.5
*->trpsEiAvVGDRLf<-*
++p+++ vVGDRLf
gi|1194845 364 SSPDNLTVVGDRLF 377
DUF2071: domain 1 of 1, from 456 to 465: score 1.0, E = 5.1
*->ltQtWrDLlF<-*
ltQtW +L F
gi|1194845 456 LTQTWDKLFF 465
DUF1177: domain 1 of 1, from 485 to 507: score 6.3, E = 0.11
*->eeEfaeLeklYGkLshLqtlgke<-*
++E+ eL +lYG+ ++L +g++
gi|1194845 485 TNELLELSSLYGSVENLTAVGNK 507
Reg_prop: domain 1 of 1, from 558 to 581: score 5.2, E = 5.8
*->slpgg.vtfalledsdG.rlWigt.n<-*
+ ++ ++ ++eds+G++lW++ ++
gi|1194845 558 AVGNKlFF--IAEDSHGrELWVSDgT 581
DNA_primase_S: domain 1 of 1, from 589 to 609: score 1.8, E = 3.5
CS EEEEE-SS-HHHH............
*->FDiDmddyddvrtDnCcsgadvcek<-*
+Di +ddy d++ ++++v+e+
gi|1194845 589 IDINFDDYSDFSP----DNLTVVED 609
Big_2: domain 1 of 1, from 685 to 706: score 1.4, E = 10
CS -SSS-EEEEEEETT.TEEEEEEE
*->lakGtatItatsgdgnksasvtv<-*
+++G + It + ++ ++ ++tv
gi|1194845 685 NKVGEVSITGDIQE-DSTLTATV 706
Big_1: domain 1 of 1, from 691 to 711: score 7.5, E = 0.057
CS EEESSSS--EEEEEEEEETTT
*->tavAngndaiTlTAtVkDanG<-*
+++++ ++++TlTAtV+D +G
gi|1194845 691 SITGDIQEDSTLTATVTDPDG 711
Rz1: domain 1 of 1, from 737 to 746: score 2.8, E = 5
*->neiisvSeee<-*
n+++++Se+e
gi|1194845 737 NSTFTPSENE 746
LVIVD: domain 1 of 7, from 787 to 817: score 32.8, E = 1.1e-08
*->gGdaqdvsVsGNYAYVAdgdngLvIVDISNP<-*
g +++vsV G+YAYVA gd gL ++DISNP
gi|1194845 787 GWPVRGVSVVGDYAYVAAGDSGLQVIDISNP 817
FRG1: domain 1 of 1, from 800 to 809: score -0.5, E = 3.1
*->raYvkAmDnGl<-*
aYv+A D+Gl
gi|1194845 800 -AYVAAGDSGL 809
DUF2135: domain 1 of 1, from 818 to 832: score 2.2, E = 9.1
*->lVyVNYyGNfdsggy<-*
+V+V+Yy+++dsg y
gi|1194845 818 QVVVPYYPDSDSGSY 832
LVIVD: domain 2 of 7, from 835 to 876: score 69.6, E = 2e-19
*->gGdaqdvsVsGNYAYVAdgdngLvIVDISNPSsPilkgsydt<-*
+G+a+dvsV GNYAYVAdg gL ++DISNP +P+l gsydt
gi|1194845 835 PGYAYDVSVVGNYAYVADGYSGLQVIDISNPQDPTLAGSYDT 876
LVIVD: domain 3 of 7, from 877 to 907: score 42.2, E = 2e-11
*->gGdaqdvsVsGNYAYVAdgdngLvIVDISNP<-*
+Gda++vsV GNYAYVAdgd gL ++DI NP
gi|1194845 877 PGDAYGVSVVGNYAYVADGDSGLQVIDIRNP 907
LVIVD: domain 4 of 7, from 920 to 966: score 51.3, E = 4.4e-14
*->gGdaqdvsVsGNYAYVAdgdng.....LvIVDISNPSsPilkgsydt
+Gda+dvsV G+YAYVA gdn++++++L I+DISNP P+++gsy++
gi|1194845 920 PGDAYDVSVVGDYAYVAAGDNYgqngsLQIIDISNPLIPTFVGSYNI 966
<-*
gi|1194845 - -
KOW: domain 1 of 2, from 929 to 945: score 3.9, E = 5.9
CS TTSEEEESSSTTTTEEE
*->kGdvVrVisGpfkGkkG<-*
+Gd+ +V +G++ G+ G
gi|1194845 929 VGDYAYVAAGDNYGQNG 945
Monooxygenase_B: domain 1 of 1, from 948 to 961: score 6.9, E = 0.073
CS EEEEEEEE-EEE--
*->qivsIgGPvIPvFv<-*
qi+ I P+IP+Fv
gi|1194845 948 QIIDISNPLIPTFV 961
Kelch_1: domain 1 of 2, from 974 to 994: score 1.2, E = 20
CS BBSTEEEEETTSEEEEE-TBS
*->pRsgagvvvldgkiYviGGyd<-*
p + +gv v++++ Yv+ G d
gi|1194845 974 PNAAYGVSVVGNYAYVAAGDD 994
LVIVD: domain 5 of 7, from 974 to 1020: score 44.7, E = 3.5e-12
*->gGdaqdvsVsGNYAYVA.....dgdngLvIVDISNPSsPilkgsydt
+ a++vsV GNYAYVA +++ ++ L I+DISNP P l gsyd+
gi|1194845 974 PNAAYGVSVVGNYAYVAagddyGQNGSLQIIDISNPQAPSLAGSYDI 1020
<-*
gi|1194845 - -
KOW: domain 2 of 2, from 983 to 999: score 1.4, E = 30
CS TTSEEEESSSTTTTEEE
*->kGdvVrVisGpfkGkkG<-*
+G++ +V +G++ G+ G
gi|1194845 983 VGNYAYVAAGDDYGQNG 999
Kelch_1: domain 2 of 2, from 1021 to 1042: score 2.9, E = 7
CS BBSTEEEEETTSEEEEE-TBSS
*->pRsgagvvvldgkiYviGGydg<-*
p + +gv v++++ Yv+GG +g
gi|1194845 1021 PDAAYGVSVVGNYAYVAGGDSG 1042
LVIVD: domain 6 of 7, from 1021 to 1062: score 58.2, E = 4.1e-16
*->gGdaqdvsVsGNYAYVAdgdngLvIVDISNPSsPilkgsydt<-*
+ a++vsV GNYAYVA gd gL ++DISNP P+l gsydt
gi|1194845 1021 PDAAYGVSVVGNYAYVAGGDSGLQVIDISNPQAPTLTGSYDT 1062
CBM_2: domain 1 of 1, from 1049 to 1062: score 1.7, E = 6.1
CS SXXSEEEETTEE E
*->saPtsftvNGat.C<-*
s+P+++t++G++++
gi|1194845 1049 SNPQAPTLTGSYdT 1062
LVIVD: domain 7 of 7, from 1063 to 1092: score 33.8, E = 5.3e-09
*->gGdaqdvsVsGNYAYVAdgdngLvIVDISNP<-*
+G+a vsV G+YAYVAdg gL ++DI NP
gi|1194845 1063 PGIAGEVSVVGDYAYVADG-GGLQVIDINNP 1092
Beta_propel: domain 1 of 1, from 1072 to 1093: score 0.4, E = 3.3
*->igDtLYtiSdseirvsdlntle<-*
+gD+ Y + ++++v+d+n++e
gi|1194845 1072 VGDYAYVADGGGLQVIDINNPE 1093
Cadherin: domain 1 of 2, from 1108 to 1196: score 33.2, E = 8.3e-09
CS --EEE-SS...S---EEEEE---S..-TTTT----------S S--
*->ysasvpEnapvGtevltvtAtDaDdPlgpNgrirYsilggnp..ggw
+ sv+En+++Gt v+t+t +D+D ++ + + g++ +++++
gi|1194845 1108 DNNSVEENQAIGTVVGTFTSVDPD---AADSHTYSLVAGDGDtdNNQ 1151
CS --B-TTSSEEE..E---S---S.....S-B--EEE----.........S-
FrIdpdtGdnegiisttkpLDREeifngeYeLtveAtDadpllasgggpp
F+I + ++t+ + D E++ Y++ v D+ +
gi|1194845 1152 FEIVN--DE----LKTKVSFDFETQ--TSYSIRVQTDDG---------NG 1184
CS --EEEE--EEE-
lsstatvtitVl<-*
+ + ++ti+V+
gi|1194845 1185 ETYEKQLTINVE 1196
Virul_Fac: domain 1 of 1, from 1111 to 1122: score -0.2, E = 4.8
*->speqNeaLgaIL<-*
s+e+N+a+g+++
gi|1194845 1111 SVEENQAIGTVV 1122
FlgD: domain 1 of 2, from 1114 to 1159: score 2.3, E = 2.8
*->gg.etGsvsggvevgLpsaAdevtvtikDaaGqv.v.nvelVrtid<
+++ G+v g+++ + p+aAd+ t ++ ++G++++++ e+V +
gi|1194845 1114 ENqAIGTVVGTFTSVDPDAADSHTYSLVAGDGDTdNnQFEIVNDEL 1159
-*
gi|1194845 - -
DUF1983: domain 1 of 2, from 1155 to 1187: score 1.2, E = 9
*->vqqkstAvadlnGklsAmYsvKvqv.tanGrkY<-*
v+++++ ++ + + + +Ys+ vq++ nG +Y
gi|1194845 1155 VNDELKTKVSFDFETQTSYSIRVQTdDGNGETY 1187
YSIRK_signal: domain 1 of 2, from 1167 to 1176: score 3.7, E = 5.9
*->nekkqkYSIR<-*
+e++ YSIR
gi|1194845 1167 FETQTSYSIR 1176
Y_Y_Y: domain 1 of 2, from 1172 to 1196: score 4.0, E = 1.8
*->kYtikvkakdkdgnwsyddiasltftvl<-*
+Y i+v++ d+++ ++y+ + lt++v+
gi|1194845 1172 SYSIRVQT-DDGNGETYE--KQLTINVE 1196
DUF1292: domain 1 of 2, from 1180 to 1196: score 1.3, E = 10
*->EeGnEvlFevlftfdsE<-*
++Gn + +e +t+ +E
gi|1194845 1180 DDGNGETYEKQLTINVE 1196
COPI_assoc: domain 1 of 1, from 1196 to 1218: score 4.1, E = 1.2
*->enMRapdadlgaGDdDddDdddeV<-*
en +++++++++ D ++D+ + V
gi|1194845 1196 ENVNEAPTAIAL-DHSNIDENEAV 1218
Ldl_recept_b: domain 1 of 1, from 1200 to 1210: score 4.2, E = 2.2
CS S-EEEEEEETT
*->qhPngIavDpi<-*
++P++Ia+D++
gi|1194845 1200 EAPTAIALDHS 1210
Cadherin: domain 2 of 2, from 1208 to 1296: score 30.6, E = 4.7e-08
CS --EEE-SS...S---EEEEE---S..-TTTT----------S S--
*->ysasvpEnapvGtevltvtAtDaDdPlgpNgrirYsilggnp..ggw
+ + En++vGt v+t+t +D+D ++ + + g++ +++++
gi|1194845 1208 DHSNIDENEAVGTVVGTFTSVDPD---AADSHTYSLVAGDGDtdNNQ 1251
CS --B-TTSSEEE..E---S---S.....S-B--EEE----.........S-
FrIdpdtGdnegiisttkpLDREeifngeYeLtveAtDadpllasgggpp
F+I + ++t+ + D E++ Y++ v D+ +
gi|1194845 1252 FEIVN--DE----LKTKVSFDFETQ--TSYSIRVQTDDG---------NG 1284
CS --EEEE--EEE-
lsstatvtitVl<-*
+ + + ti+V
gi|1194845 1285 ETYEKQFTINVD 1296
FlgD: domain 2 of 2, from 1219 to 1259: score 2.1, E = 3.5
*->GsvsggvevgLpsaAdevtvtikDaaGqv.v.nvelVrtid<-*
G+v g+++ + p+aAd+ t ++ ++G++++++ e+V +
gi|1194845 1219 GTVVGTFTSVDPDAADSHTYSLVAGDGDTdNnQFEIVNDEL 1259
DUF1983: domain 2 of 2, from 1255 to 1287: score 1.2, E = 9
*->vqqkstAvadlnGklsAmYsvKvqv.tanGrkY<-*
v+++++ ++ + + + +Ys+ vq++ nG +Y
gi|1194845 1255 VNDELKTKVSFDFETQTSYSIRVQTdDGNGETY 1287
YSIRK_signal: domain 2 of 2, from 1267 to 1276: score 3.7, E = 5.9
*->nekkqkYSIR<-*
+e++ YSIR
gi|1194845 1267 FETQTSYSIR 1276
A2M_N: domain 1 of 1, from 1272 to 1293: score -0.1, E = 8.5
CS EEEEEEEETT-TTSEEEEEEEE
*->tWtieveydpdggslgsasFrV<-*
+++i+v++d+++g++++++F++
gi|1194845 1272 SYSIRVQTDDGNGETYEKQFTI 1293
Y_Y_Y: domain 2 of 2, from 1272 to 1294: score 3.7, E = 2.3
*->kYtikvkakdkdgnwsyddiasltftvl<-*
+Y i+v++ d +g++ ++ +ft++
gi|1194845 1272 SYSIRVQTDDGNGET-----YEKQFTIN 1294
DUF1292: domain 2 of 2, from 1280 to 1299: score 5.0, E = 0.85
*->EeGnEvlFevlftfdsEefG<-*
++Gn + +e ft+ +++ +
gi|1194845 1280 DDGNGETYEKQFTINVDDLN 1299
Trypan_PARP: domain 1 of 3, from 1288 to 1367: score 25.1, E = 3.3e-06
*->ekgtkvgaddtngteredePEeeeEt..ePEeegeeEtePEeegeeE
ek + dd n +e+e ePE+e+Et+ ePE+e e Et+PE e+e+E
gi|1194845 1288 EKQFTINVDDLNEAEPESEPEPEPETqlEPEPESESETQPESEPEPE 1334
tePEetgeeepepepEtEPEPEPepepepepep<-*
+e E+ e e e e E+EPE EPe + epe ep
gi|1194845 1335 SESEPESESESESESESEPESEPESQSEPESEP 1367
Trypan_PARP: domain 2 of 3, from 1368 to 1420: score 0.9, E = 9.2
*->ePEeeeEtePEeegeeEtePEeegeeEtePEetgeeepepepEtEPE
ePE + E+e e+++E+ePE e e E+e E e+e + epEt E
gi|1194845 1368 EPESQSEPESQSEPQPEPEPESESESESESESESEPESQSEPETQLE 1414
PEPepe<-*
PEPe e
gi|1194845 1415 PEPESE 1420
Trypan_PARP: domain 3 of 3, from 1422 to 1475: score 3.0, E = 2.5
*->EeeeEtePEeegeeEtePEeegeeEtePEetgeeepepepEtEPEPE
E e E+ePE+++e+Et E+e+ E+ PE+ e epep EP PE
gi|1194845 1422 ESESESEPEPQPEPETIAEPEPVVEPTPEP--ETIAEPEPVVEPTPE 1466
Pepepepep<-*
Pe epep
gi|1194845 1467 PETIAEPEP 1475
VPEP: domain 1 of 5, from 1447 to 1455: score 1.5, E = 22
*->aVPEPstila<-*
++PEP t +a
gi|1194845 1447 PTPEPET-IA 1455
VPEP: domain 2 of 5, from 1463 to 1471: score 1.5, E = 22
*->aVPEPstila<-*
++PEP t +a
gi|1194845 1463 PTPEPET-IA 1471
VPEP: domain 3 of 5, from 1479 to 1487: score 1.5, E = 22
*->aVPEPstila<-*
++PEP t +a
gi|1194845 1479 PTPEPET-IA 1487
VPEP: domain 4 of 5, from 1495 to 1503: score 1.5, E = 22
*->aVPEPstila<-*
++PEP t +a
gi|1194845 1495 PTPEPET-IA 1503
VPEP: domain 5 of 5, from 1511 to 1519: score 1.5, E = 22
*->aVPEPstila<-*
++PEP t +a
gi|1194845 1511 PTPEPET-IA 1519
HemolysinCabind: domain 1 of 13, from 1576 to 1593: score 5.4, E = 1.8
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+a +++++ aG+D+
gi|1194845 1576 VGDATDNIISALAGDDIV 1593
HemolysinCabind: domain 2 of 13, from 1594 to 1611: score 14.6, E = 0.003
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnD+++G++ nDt
gi|1194845 1594 NSGDGNDSINGNQDNDTV 1611
Pox_ser-thr_kin: domain 1 of 1, from 1594 to 1616: score 0.2, E = 6.5
*->fsgelqwlflsskrinettiLGNl<-*
+sg+ + ++ + ++n+t+ +GN+
gi|1194845 1594 NSGDGND-SINGNQDNDTVDGGNG 1616
HemolysinCabind: domain 3 of 13, from 1612 to 1629: score 17.4, E = 0.00041
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD++ Gg+ nD++
gi|1194845 1612 DGGNGNDVILGGKNNDVI 1629
HemolysinCabind: domain 4 of 13, from 1630 to 1647: score 19.3, E = 0.00011
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G aGnD L+G+ G+D+
gi|1194845 1630 FGSAGNDELNGNLGDDVV 1647
HemolysinCabind: domain 5 of 13, from 1648 to 1665: score 18.6, E = 0.00017
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G Dt +Gg+ nDtl
gi|1194845 1648 DGGEGADTVFGGQNNDTL 1665
HemolysinCabind: domain 6 of 13, from 1666 to 1683: score 12.6, E = 0.012
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G+D L+G+ G D
gi|1194845 1666 TGGDGDDWLNGNLGTDFV 1683
HemolysinCabind: domain 7 of 13, from 1684 to 1701: score 11.5, E = 0.026
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G D yGg+ Dtl
gi|1194845 1684 DGGEGEDLVYGGQDGDTL 1701
HemolysinCabind: domain 8 of 13, from 1702 to 1719: score 19.9, E = 7.4e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GG GnDtL+G+ G D +
gi|1194845 1702 MGGSGNDTLFGNIGSDFI 1719
HemolysinCabind: domain 9 of 13, from 1720 to 1737: score 20.0, E = 7e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G++GnD +yGg+ nDtl
gi|1194845 1720 AGNDGNDLIYGGKDNDTL 1737
HemolysinCabind: domain 10 of 13, from 1738 to 1755: score 23.6, E = 5.4e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++GnDtLyG+ GnD+
gi|1194845 1738 SGNQGNDTLYGDLGNDVV 1755
HemolysinCabind: domain 11 of 13, from 1756 to 1773: score 21.6, E = 2.2e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GG+G D +Gg+GnDtl
gi|1194845 1756 VGGEGTDFVFGGEGNDTL 1773
Nucleos_tra2_N: domain 1 of 1, from 1757 to 1769: score 3.8, E = 2
*->agaGvaFVFGgla<-*
+g+G++FVFGg
gi|1194845 1757 GGEGTDFVFGGEG 1769
HemolysinCabind: domain 12 of 13, from 1774 to 1791: score 21.8, E = 1.9e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD L+Gg+GnD+l
gi|1194845 1774 DGGEGNDELTGGNGNDLL 1791
HemolysinCabind: domain 13 of 13, from 1792 to 1809: score 20.4, E = 5.3e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G +GnDtL+G aG D++
gi|1194845 1792 LGAEGNDTLTGEAGSDRF 1809
//