hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 119486122.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query sequence: gi|119486122|ref|ZP_01620182.1|
Accession: [none]
Description: hypothetical protein L8106_17302 [Lyngbya sp. PCC 8106]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 202.6 3.1e-60 14
TSP_3 Thrombospondin type 3 repeat 155.0 2.9e-45 30
Binary_toxB Clostridial binary toxin B/anthrax to 78.5 1.4e-22 13
Excalibur Excalibur calcium-binding domain 17.8 2.4e-05 9
FG-GAP FG-GAP repeat 20.4 5.7e-05 5
DUF1964 Domain of unknown function (DUF1964) 16.0 0.0015 4
Dockerin_1 Dockerin type I repeat 12.8 0.0086 10
HYR HYR domain 10.2 0.022 2
SRP1_TIP1 Seripauperin and TIP1 family 10.0 0.026 2
DUF2043 Uncharacterized conserved protein (DU 5.1 0.21 4
DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-te 4.7 0.22 1
efhand EF hand 7.6 0.62 3
DUF1320 Protein of unknown function (DUF1320) 4.8 0.83 1
Fil_haemagg Haemagluttinin repeat 5.1 0.98 2
Cadherin Cadherin domain 4.8 1.2 1
Chlorovi_GP_rpt Chlorovirus glycoprotein repeat 4.9 1.4 1
DUF2383 Protein of unknown function (DUF2383) 4.8 1.5 1
Urm1 Urm1 (Ubiquitin related modifier) -0.1 1.6 1
RNA_pol_Rpb8 RNA polymerase Rpb8 3.3 1.6 1
YkyA Putative cell-wall binding lipoprotei 3.1 2 1
Ad_cyc_g-alpha Adenylate cyclase G-alpha binding dom 4.1 2.3 2
Cache_2 Cache domain 3.9 2.5 1
Inh Protease inhibitor Inh 3.1 2.6 1
PTH2 Peptidyl-tRNA hydrolase PTH2 0.6 2.7 1
NosD Periplasmic copper-binding protein (N 4.0 2.9 2
Y_Y_Y Y_Y_Y domain 3.1 3.4 1
WD40 WD domain, G-beta repeat 3.0 3.6 1
QLQ QLQ 3.9 3.6 1
DUF634 Protein of unknown function (DUF634) 2.0 3.7 1
Phage_tail_X Phage Tail Protein X 2.7 4.7 1
LTXXQ LTXXQ motif 3.7 4.7 1
DUF2404 Putative integral membrane protein co 2.5 4.8 1
Smr Smr domain 1.3 5.1 1
PKD PKD domain 1.7 5.4 2
DUF1323 Protein of unknown function (DUF1323) 1.9 5.6 1
EF_assoc_1 EF hand associated 2.7 5.6 1
RPH3A_effector Rabphilin-3A effector domain 0.2 5.9 1
Tafi-CsgF Curli production assembly/transport c 1.2 6 1
PSCyt2 Protein of unknown function (DUF1549) 1.0 6.5 1
DUF1674 Protein of unknown function (DUF1674) 0.7 6.9 1
DUF1805 Domain of unknown function (DUF1805) 1.9 7.5 1
Aminotran_1_2 Aminotransferase class I and II 0.3 7.6 1
Staphylcoagulse Staphylocoagulase repeat 2.6 8.2 1
DUF167 Uncharacterised ACR, YggU family COG1 1.3 8.4 4
YbjN Putative bacterial sensory transducti 0.1 8.6 1
ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP) 1.8 8.7 1
Vps4_C Vps4 C terminal oligomerisation domai 0.9 8.7 2
TFIIF_beta Transcription initiation factor IIF, -0.6 8.8 1
FB_lectin Fungal fruit body lectin 1.1 9.1 1
DUF296 Domain of unknown function (DUF296) 1.2 9.1 1
Flagellin_IN Flagellin hook IN motif 2.2 9.1 1
SoxZ Sulphur oxidation protein SoxZ 1.0 9.3 1
DUF1394 Protein of unknown function (DUF1394) -0.9 9.3 1
Pili_assembly_N Gram-negative pili assembly chaperone 1.0 9.8 1
Fimbrial_K88 Fimbrial, major and minor subunit 0.2 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Pili_assembly_N 1/1 35 50 .. 23 39 .. 1.0 9.8
DUF1805 1/1 123 136 .. 55 68 .] 1.9 7.5
PTH2 1/1 200 207 .. 110 117 .] 0.6 2.7
YkyA 1/1 219 230 .. 195 206 .] 3.1 2
DUF2383 1/1 241 256 .. 1 16 [. 4.8 1.5
Fil_haemagg 1/2 246 273 .. 52 75 .] 5.0 1.1
Dockerin_1 1/10 320 334 .. 7 21 .] 0.6 49
DPPIV_N 1/1 336 358 .. 67 91 .. 4.7 0.22
WD40 1/1 337 345 .. 30 38 .] 3.0 3.6
Vps4_C 1/2 449 456 .. 60 67 .] 0.8 9.4
DUF1394 1/1 477 485 .. 305 313 .] -0.9 9.3
DUF2404 1/1 518 531 .. 83 96 .] 2.5 4.8
Aminotran_1_2 1/1 525 543 .. 395 413 .] 0.3 7.6
PSCyt2 1/1 545 559 .. 216 230 .] 1.0 6.5
HYR 1/2 564 580 .. 70 86 .] 6.5 0.26
Smr 1/1 565 581 .. 73 89 .] 1.3 5.1
Inh 1/1 624 632 .. 95 103 .] 3.1 2.6
Tafi-CsgF 1/1 669 696 .. 128 156 .] 1.2 6
DUF1320 1/1 728 767 .. 70 111 .] 4.8 0.83
SoxZ 1/1 767 787 .. 82 104 .] 1.0 9.3
Cache_2 1/1 769 782 .. 82 95 .] 3.9 2.5
DUF167 1/4 782 792 .. 34 44 .. 0.3 17
DUF2043 1/4 797 805 .. 103 111 .] 1.3 3.9
DUF1964 1/4 828 840 .. 17 29 .. 4.9 1.4
SRP1_TIP1 1/2 875 893 .. 69 87 .. 5.0 0.7
DUF167 2/4 893 903 .. 34 44 .. 0.3 17
DUF2043 2/4 908 916 .. 103 111 .] 1.3 3.9
DUF1964 2/4 939 951 .. 17 29 .. 4.9 1.4
SRP1_TIP1 2/2 986 1004 .. 69 87 .. 5.0 0.7
DUF167 3/4 1004 1014 .. 34 44 .. 0.3 17
DUF2043 3/4 1019 1027 .. 103 111 .] 1.3 3.9
DUF1964 3/4 1050 1062 .. 17 29 .. 4.9 1.4
DUF167 4/4 1115 1125 .. 34 44 .. 0.3 17
DUF2043 4/4 1130 1138 .. 103 111 .] 1.3 3.9
DUF1964 4/4 1161 1173 .. 17 29 .. 1.5 12
Flagellin_IN 1/1 1203 1228 .. 36 63 .] 2.2 9.1
FB_lectin 1/1 1215 1227 .. 135 147 .] 1.1 9.1
DUF634 1/1 1241 1259 .. 1 20 [. 2.0 3.7
DUF1323 1/1 1249 1258 .. 1 10 [. 1.9 5.6
Chlorovi_GP_rpt 1/1 1281 1294 .. 11 25 .. 4.9 1.4
Binary_toxB 1/13 1297 1307 .. 1 11 [. 7.0 0.043
TSP_3 1/30 1298 1310 .. 1 15 [] 7.6 0.43
FG-GAP 1/5 1299 1308 .. 9 18 .. 0.6 35
TSP_3 2/30 1311 1323 .. 1 15 [] 4.0 5.4
Binary_toxB 2/13 1325 1337 .. 1 13 [. 8.9 0.013
TSP_3 3/30 1326 1338 .. 1 15 [] 5.8 1.5
Dockerin_1 2/10 1327 1339 .. 1 13 [. 2.8 9.8
Excalibur 1/9 1335 1347 .. 27 39 .. 4.8 0.78
Binary_toxB 3/13 1338 1351 .. 1 14 [. 11.3 0.0025
TSP_3 4/30 1339 1351 .. 1 15 [] 6.2 1.1
ACP_syn_III_C 1/1 1349 1359 .. 1 11 [. 1.8 8.7
QLQ 1/1 1352 1362 .. 1 11 [. 3.9 3.6
LTXXQ 1/1 1354 1366 .. 11 23 .] 3.7 4.7
efhand 1/3 1359 1371 .. 6 18 .. 4.4 4.9
TSP_3 5/30 1362 1374 .. 1 15 [] 6.6 0.86
Dockerin_1 3/10 1363 1371 .. 1 9 [. 0.2 63
FG-GAP 2/5 1387 1403 .. 1 17 [. 3.2 6.1
Fimbrial_K88 1/1 1390 1398 .. 1 9 [. 0.2 9.8
TFIIF_beta 1/1 1391 1401 .. 1 11 [. -0.6 8.8
Dockerin_1 4/10 1395 1401 .. 1 7 [. 2.1 17
TSP_3 6/30 1406 1418 .. 1 15 [] 6.5 0.94
Binary_toxB 4/13 1418 1434 .. 1 17 [. 12.5 0.0012
Excalibur 2/9 1419 1427 .. 31 39 .. 4.1 1.4
TSP_3 7/30 1419 1431 .. 1 15 [] 6.2 1.2
TSP_3 8/30 1435 1447 .. 1 15 [] 3.9 5.5
TSP_3 9/30 1448 1460 .. 1 15 [] 6.5 0.91
Phage_tail_X 1/1 1465 1479 .. 47 61 .] 2.7 4.7
TSP_3 10/30 1471 1483 .. 1 15 [] 4.3 4.3
Dockerin_1 5/10 1472 1484 .. 1 13 [. 1.0 36
Binary_toxB 5/13 1483 1496 .. 1 14 [. 4.2 0.28
Excalibur 3/9 1484 1491 .. 31 38 .. 1.2 14
TSP_3 11/30 1484 1496 .. 1 15 [] 6.7 0.82
FG-GAP 3/5 1497 1513 .. 1 17 [. 2.5 9.9
NosD 1/2 1514 1525 .. 37 55 .. 0.6 25
TSP_3 12/30 1515 1530 .. 1 15 [] 6.1 1.3
Binary_toxB 6/13 1540 1554 .. 1 15 [. 1.0 2.4
TSP_3 13/30 1554 1566 .. 1 15 [] 1.5 29
Dockerin_1 6/10 1577 1585 .. 1 9 [. 4.6 2.9
efhand 2/3 1577 1585 .. 10 18 .. 0.6 51
Binary_toxB 7/13 1586 1598 .. 1 12 [. 1.5 1.7
TSP_3 14/30 1588 1600 .. 1 15 [] 9.0 0.17
Dockerin_1 7/10 1589 1600 .. 1 12 [. 0.9 39
Excalibur 4/9 1589 1596 .. 32 39 .. 0.0 37
Ad_cyc_g-alpha 1/2 1615 1634 .. 37 56 .] 0.2 30
PKD 1/2 1703 1719 .. 75 92 .] 0.8 10
Binary_toxB 8/13 1723 1733 .. 1 11 [. 3.0 0.63
TSP_3 15/30 1724 1736 .. 1 15 [] 6.3 1.1
Excalibur 5/9 1725 1732 .. 32 39 .. 0.3 29
TSP_3 16/30 1737 1751 .. 1 15 [] 0.9 44
Binary_toxB 9/13 1751 1760 .. 1 10 [. 0.8 2.7
Binary_toxB 10/13 1764 1777 .. 1 14 [. 17.7 3.9e-05
Excalibur 6/9 1765 1773 .. 31 39 .. 4.1 1.4
TSP_3 17/30 1765 1777 .. 1 15 [] 5.3 2.2
Excalibur 7/9 1785 1795 .. 24 38 .. 0.6 23
efhand 3/3 1786 1797 .. 7 18 .. 2.7 14
TSP_3 18/30 1788 1800 .. 1 15 [] 6.6 0.86
Dockerin_1 8/10 1789 1797 .. 1 9 [. 0.2 63
Vps4_C 2/2 1799 1803 .. 63 67 .] 0.1 15
FG-GAP 4/5 1813 1829 .. 1 17 [. 7.0 0.48
Dockerin_1 9/10 1821 1827 .. 1 7 [. 0.3 60
TSP_3 19/30 1832 1844 .. 1 15 [] 0.4 64
Excalibur 8/9 1839 1852 .. 26 38 .. 1.5 11
Binary_toxB 11/13 1844 1860 .. 1 17 [. 3.4 0.47
TSP_3 20/30 1845 1857 .. 1 15 [] 6.9 0.7
Fil_haemagg 2/2 1855 1943 .. 31 75 .] 0.1 26
TSP_3 21/30 1861 1873 .. 1 15 [] 4.8 3.1
NosD 2/2 1873 1884 .. 44 55 .. 3.4 4.2
TSP_3 22/30 1874 1886 .. 1 15 [] 6.6 0.86
TSP_3 23/30 1897 1909 .. 1 15 [] 6.9 0.73
Binary_toxB 12/13 1909 1922 .. 1 14 [. 1.1 2.2
Excalibur 9/9 1910 1917 .. 31 38 .. 1.2 14
TSP_3 24/30 1910 1922 .. 1 15 [] 7.1 0.63
FG-GAP 5/5 1930 1948 .. 1 19 [. 7.1 0.44
TSP_3 25/30 1937 1949 .. 1 15 [] 4.5 3.7
TSP_3 26/30 1964 1976 .. 1 15 [] 2.8 12
TSP_3 27/30 1977 1989 .. 1 15 [] 5.0 2.7
RNA_pol_Rpb8 1/1 1985 1997 .. 1 13 [. 3.3 1.6
TSP_3 28/30 1993 2002 .. 1 12 [. 0.0 83
Dockerin_1 10/10 1994 2005 .. 1 12 [. 0.0 73
TSP_3 29/30 2004 2019 .. 1 15 [] 3.6 7
Ad_cyc_g-alpha 2/2 2022 2047 .. 30 56 .] 3.9 2.6
Binary_toxB 13/13 2030 2040 .. 1 11 [. 6.1 0.081
TSP_3 30/30 2031 2043 .. 1 15 [] 6.2 1.1
EF_assoc_1 1/1 2102 2122 .. 1 21 [. 2.7 5.6
Staphylcoagulse 1/1 2105 2124 .. 8 27 .] 2.6 8.2
HYR 2/2 2129 2155 .. 59 86 .] 3.6 1.9
PKD 2/2 2137 2153 .. 75 92 .] 0.9 9.9
Cadherin 1/1 2138 2156 .. 81 107 .] 4.8 1.2
Y_Y_Y 1/1 2138 2156 .. 49 69 .] 3.1 3.4
HemolysinCabind 1/14 2200 2217 .. 1 18 [] 14.8 0.0026
HemolysinCabind 2/14 2218 2235 .. 1 18 [] 10.6 0.05
HemolysinCabind 3/14 2236 2253 .. 1 18 [] 14.0 0.0046
DUF1674 1/1 2254 2262 .. 36 44 .. 0.7 6.9
HemolysinCabind 4/14 2273 2290 .. 1 18 [] 8.0 0.3
HemolysinCabind 5/14 2291 2308 .. 1 18 [] 6.8 0.7
HemolysinCabind 6/14 2309 2326 .. 1 18 [] 17.4 0.00042
RPH3A_effector 1/1 2323 2332 .. 1 11 [. 0.2 5.9
HemolysinCabind 7/14 2348 2365 .. 1 18 [] 22.9 9.2e-06
HemolysinCabind 8/14 2366 2383 .. 1 18 [] 14.5 0.0033
HemolysinCabind 9/14 2384 2401 .. 1 18 [] 17.5 0.00039
HemolysinCabind 10/14 2403 2414 .. 2 13 .. 6.6 0.76
HemolysinCabind 11/14 2433 2450 .. 1 18 [] 20.4 5.1e-05
YbjN 1/1 2438 2460 .. 144 166 .] 0.1 8.6
HemolysinCabind 12/14 2452 2468 .. 2 18 .] 13.5 0.0063
Urm1 1/1 2458 2462 .. 109 113 .] -0.1 1.6
HemolysinCabind 13/14 2469 2486 .. 1 18 [] 11.5 0.025
HemolysinCabind 14/14 2487 2504 .. 1 18 [] 24.2 3.7e-06
DUF296 1/1 2501 2517 .. 1 18 [. 1.2 9.1
Alignments of top-scoring domains:
Pili_assembly_N: domain 1 of 1, from 35 to 50: score 1.0, E = 9.8
CS EES-SSSEEEEEEEEEE
*->sNndqdypiLvQswidn<-*
sN qdy +LvQ+ idn
gi|1194861 35 SN-VQDYQYLVQTIIDN 50
DUF1805: domain 1 of 1, from 123 to 136: score 1.9, E = 7.5
CS --TT-BHHHHGGGG
*->ikpGMtGrEALekl<-*
+ +G+ G E +ekl
gi|1194861 123 VAVGDAGVEFIEKL 136
PTH2: domain 1 of 1, from 200 to 207: score 0.6, E = 2.7
CS HHTTSEE-
*->vTGhLKLL<-*
+ G LKLL
gi|1194861 200 IAGQLKLL 207
YkyA: domain 1 of 1, from 219 to 230: score 3.1, E = 2
*->eKqdFYkaAglk<-*
+Kq FY+ +g++
gi|1194861 219 LKQSFYNGTGFN 230
DUF2383: domain 1 of 1, from 241 to 256: score 4.8, E = 1.5
*->etvsvLNdLIEtskDG<-*
++vs LN++I+++ DG
gi|1194861 241 TEVSILNKIIRINSDG 256
Fil_haemagg: domain 1 of 2, from 246 to 273: score 5.0, E = 1.1
CS .......... .EEEEESS-EEEEE
*->laagalrngg....dltltaaGdLdnsg<-*
l+ ++ +n++++ +dl++t +G+L n+g
gi|1194861 246 LNKIIRINSDgsieDLNITVTGTLNNAG 273
Dockerin_1: domain 1 of 10, from 320 to 334: score 0.6, E = 49
CS --SHHHHHHHHHHH-
*->kVnalDlallkkyll<-*
+Vn Dl+l+ ++l
gi|1194861 320 NVNVADLVLIDNFLY 334
DPPIV_N: domain 1 of 1, from 336 to 358: score 4.7, E = 0.22
CS EETTEEEEESSSSS..--EEEE---
*->VrdNNLYvrelatgdgketqiTsDG<-*
VrdNNLY+++ t ++tq T G
gi|1194861 336 VRDNNLYIWDINTN--TVTQKTISG 358
WD40: domain 1 of 1, from 337 to 345: score 3.0, E = 3.6
CS TTSEEEEEE
*->rDgtikiWd<-*
rD++++iWd
gi|1194861 337 RDNNLYIWD 345
Vps4_C: domain 1 of 2, from 449 to 456: score 0.8, E = 9.4
CS HHHHHTT-
*->eeFTndFG<-*
+eFT+d G
gi|1194861 449 TEFTEDSG 456
DUF1394: domain 1 of 1, from 477 to 485: score -0.9, E = 9.3
*->DesTpKqir<-*
D +Tp qir
gi|1194861 477 DFDTPNQIR 485
DUF2404: domain 1 of 1, from 518 to 531: score 2.5, E = 4.8
*->rGglrltieTkvni<-*
+G++ lt++++++i
gi|1194861 518 SGNIVLTLSATADI 531
Aminotran_1_2: domain 1 of 1, from 525 to 543: score 0.3, E = 7.6
CS EEC-TSS-HHHHHHHHHHH
*->itvtAggteeeleelleai<-*
+++tA t+e+ e +leai
gi|1194861 525 LSATADITPENWELALEAI 543
PSCyt2: domain 1 of 1, from 545 to 559: score 1.0, E = 6.5
*->Fasidrrgrtgdres<-*
F++++++++t++r++
gi|1194861 545 FNNTSDAPDTDPRQV 559
HYR: domain 1 of 2, from 564 to 580: score 6.5, E = 0.26
*->tDnaGNeAdsCtFtVtV<-*
tD++GN++++ t t+++
gi|1194861 564 TDANGNQGNTATTTINI 580
Smr: domain 1 of 1, from 565 to 581: score 1.3, E = 5.1
*->eappneGGaGatyVlLk<-*
+a+ n+G++ +t + ++
gi|1194861 565 DANGNQGNTATTTINIE 581
Inh: domain 1 of 1, from 624 to 632: score 3.1, E = 2.6
CS SS-EEEEEE
*->dGavltLkr<-*
+Ga+ltL+r
gi|1194861 624 SGATLTLQR 632
Tafi-CsgF: domain 1 of 1, from 669 to 696: score 1.2, E = 6
*->tralDsvrLtIvngatGevTqIvvPllVe<-*
t +++ +Lt + +atG+ + v+ + ++
gi|1194861 669 TNSNGTLNLTFNTDATGDLVDQVLQQ-IT 696
DUF1320: domain 1 of 1, from 728 to 767: score 4.8, E = 0.83
*->LedvadGklsLGlddatetappegggvqirssdrvrlFgRds<-*
L + ++G +++ + +t+t+p++++ ++d++ lF+ d+
gi|1194861 728 LALTGNGSVTVNI--TTNTTPTVNNISKTGTEDNTILFTADD 767
SoxZ: domain 1 of 1, from 767 to 787: score 1.0, E = 9.3
CS E.EEEEEEETTS-EEEEEEEE--
*->delkfsWtDnkGssetaeakItv<-*
d ++ +tD++G+s t+ It
gi|1194861 767 D-FTSQFTDDDGDSLTKI-QITS 787
Cache_2: domain 1 of 1, from 769 to 782: score 3.9, E = 2.5
*->lsnlkDpnGkalfv<-*
+s+++D++G++l++
gi|1194861 769 TSQFTDDDGDSLTK 782
DUF167: domain 1 of 4, from 782 to 792: score 0.3, E = 17
CS -----TTIIII
*->kVrikAPPvdG<-*
k++i++PP++G
gi|1194861 782 KIQITSPPENG 792
DUF2043: domain 1 of 4, from 797 to 805: score 1.3, E = 3.9
*->eGrpineED<-*
+G+p+n ED
gi|1194861 797 NGNPVNAED 805
DUF1964: domain 1 of 4, from 828 to 840: score 4.9, E = 1.4
*->aFsWrgadGtSta<-*
+F W+g+dGtS a
gi|1194861 828 SFGWNGFDGTSYA 840
SRP1_TIP1: domain 1 of 2, from 875 to 893: score 5.0, E = 0.7
*->TDDsYTTlftEidfdqvTk<-*
T D++T+ ft id+d Tk
gi|1194861 875 TADDFTSQFTDIDGDSLTK 893
DUF167: domain 2 of 4, from 893 to 903: score 0.3, E = 17
CS -----TTIIII
*->kVrikAPPvdG<-*
k++i++PP++G
gi|1194861 893 KIQITSPPENG 903
DUF2043: domain 2 of 4, from 908 to 916: score 1.3, E = 3.9
*->eGrpineED<-*
+G+p+n ED
gi|1194861 908 NGNPVNAED 916
DUF1964: domain 2 of 4, from 939 to 951: score 4.9, E = 1.4
*->aFsWrgadGtSta<-*
+F W+g+dGtS a
gi|1194861 939 SFGWNGFDGTSYA 951
SRP1_TIP1: domain 2 of 2, from 986 to 1004: score 5.0, E = 0.7
*->TDDsYTTlftEidfdqvTk<-*
T D++T+ ft id+d Tk
gi|1194861 986 TADDFTSQFTDIDGDSLTK 1004
DUF167: domain 3 of 4, from 1004 to 1014: score 0.3, E = 17
CS -----TTIIII
*->kVrikAPPvdG<-*
k++i++PP++G
gi|1194861 1004 KIQITSPPENG 1014
DUF2043: domain 3 of 4, from 1019 to 1027: score 1.3, E = 3.9
*->eGrpineED<-*
+G+p+n ED
gi|1194861 1019 NGNPVNAED 1027
DUF1964: domain 3 of 4, from 1050 to 1062: score 4.9, E = 1.4
*->aFsWrgadGtSta<-*
+F W+g+dGtS a
gi|1194861 1050 SFGWNGFDGTSYA 1062
DUF167: domain 4 of 4, from 1115 to 1125: score 0.3, E = 17
CS -----TTIIII
*->kVrikAPPvdG<-*
k++i++PP++G
gi|1194861 1115 KIQITSPPENG 1125
DUF2043: domain 4 of 4, from 1130 to 1138: score 1.3, E = 3.9
*->eGrpineED<-*
+G+p+n ED
gi|1194861 1130 NGNPVNAED 1138
DUF1964: domain 4 of 4, from 1161 to 1173: score 1.5, E = 12
*->aFsWrgadGtSta<-*
+F W+g+dG S a
gi|1194861 1161 SFGWNGFDGNSYA 1173
Flagellin_IN: domain 1 of 1, from 1203 to 1228: score 2.2, E = 9.1
*->NsaaaktGVsAsvdadtnggrLvltstt<-*
Ns ++ ++A d+d+ +L++t tt
gi|1194861 1203 NSQDNELEITAPTDEDG--DNLTITVTT 1228
FB_lectin: domain 1 of 1, from 1215 to 1227: score 1.1, E = 9.1
CS EESSSCEEEEEEE
*->tvaeGNnLeanvv<-*
t ++G+nL ++v+
gi|1194861 1215 TDEDGDNLTITVT 1227
DUF634: domain 1 of 1, from 1241 to 1259: score 2.0, E = 3.7
*->cpckiddiSLePqdLeKLLa<-*
+p +ddi L P++L+ LL+
gi|1194861 1241 TPVNVDDI-LTPEELAGLLY 1259
DUF1323: domain 1 of 1, from 1249 to 1258: score 1.9, E = 5.6
*->MTteELAell<-*
+T+eELA ll
gi|1194861 1249 LTPEELAGLL 1258
Chlorovi_GP_rpt: domain 1 of 1, from 1281 to 1294: score 4.9, E = 1.4
*->GvtatiPgtqniDIi<-*
Gv++ +Pgt+niDIi
gi|1194861 1281 GVNT-VPGTVNIDII 1294
Binary_toxB: domain 1 of 13, from 1297 to 1307: score 7.0, E = 0.043
*->dlDtDnDgIPD<-*
d+DtD+DgIPD
gi|1194861 1297 DTDTDGDGIPD 1307
TSP_3: domain 1 of 30, from 1298 to 1310: score 7.6, E = 0.43
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D+D+Dg+ D d
gi|1194861 1298 TDTDGDGIP--DIND 1310
FG-GAP: domain 1 of 5, from 1299 to 1308: score 0.6, E = 35
CS -TTSSSSSEE
*->DlnGDGrpDl<-*
D +GDG+pD+
gi|1194861 1299 DTDGDGIPDI 1308
TSP_3: domain 2 of 30, from 1311 to 1323: score 4.0, E = 5.4
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+DnDg+ D+ +
gi|1194861 1311 LDDDNDGIF--DSNE 1323
Binary_toxB: domain 2 of 13, from 1325 to 1337: score 8.9, E = 0.013
*->dlDtDnDgIPDlw<-*
d DtD+DgIPD++
gi|1194861 1325 DGDTDGDGIPDSL 1337
TSP_3: domain 3 of 30, from 1326 to 1338: score 5.8, E = 1.5
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+Dg+ D+ d
gi|1194861 1326 GDTDGDGIP--DSLD 1338
Dockerin_1: domain 2 of 10, from 1327 to 1339: score 2.8, E = 9.8
CS -TT-SS--SHHHH
*->DvNgDGkVnalDl<-*
D +gDG ++lDl
gi|1194861 1327 DTDGDGIPDSLDL 1339
Excalibur: domain 1 of 9, from 1335 to 1347: score 4.8, E = 0.78
*->DphkLDrDgDGiA<-*
D+ LD D+DGi+
gi|1194861 1335 DSLDLDSDNDGIP 1347
Binary_toxB: domain 3 of 13, from 1338 to 1351: score 11.3, E = 0.0025
*->dlDtDnDgIPDlwE<-*
dlD+DnDgIPDl E
gi|1194861 1338 DLDSDNDGIPDLNE 1351
TSP_3: domain 4 of 30, from 1339 to 1351: score 6.2, E = 1.1
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1339 LDSDNDGIP--DLNE 1351
ACP_syn_III_C: domain 1 of 1, from 1349 to 1359: score 1.8, E = 8.7
CS HHCTT--GGG-
*->LekaGltpeDI<-*
L ++Gltp++I
gi|1194861 1349 LNESGLTPDQI 1359
QLQ: domain 1 of 1, from 1352 to 1362: score 3.9, E = 3.6
*->spFTpaQlqeL<-*
s +Tp+Q+++L
gi|1194861 1352 SGLTPDQINQL 1362
LTXXQ: domain 1 of 1, from 1354 to 1366: score 3.7, E = 4.7
*->LTpEQrqqlkrlk<-*
LTp+Q+ ql+
gi|1194861 1354 LTPDQINQLDTDG 1366
efhand: domain 1 of 3, from 1359 to 1371: score 4.4, E = 4.9
CS HHHHTTTSSSEEH
*->FkefDkDgDGkIs<-*
++++D+DgDG I+
gi|1194861 1359 INQLDTDGDGVID 1371
TSP_3: domain 5 of 30, from 1362 to 1374: score 6.6, E = 0.86
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+Dgv D +
gi|1194861 1362 LDTDGDGVI--DPTN 1374
Dockerin_1: domain 3 of 10, from 1363 to 1371: score 0.2, E = 63
CS -TT-SS--S
*->DvNgDGkVn<-*
D +gDG+++
gi|1194861 1363 DTDGDGVID 1371
FG-GAP: domain 2 of 5, from 1387 to 1403: score 3.2, E = 6.1
CS CCSCEEEC-TTSSSSSE
*->fgssvaagDlnGDGrpD<-*
++ ++ DlnGDG pD
gi|1194861 1387 TTPDSGELDLNGDGQPD 1403
Fimbrial_K88: domain 1 of 1, from 1390 to 1398: score 0.2, E = 9.8
*->fnGeidiGG<-*
++Ge+d++G
gi|1194861 1390 DSGELDLNG 1398
TFIIF_beta: domain 1 of 1, from 1391 to 1401: score -0.6, E = 8.8
*->sgDLDLeragr<-*
sg+LDL++ g+
gi|1194861 1391 SGELDLNGDGQ 1401
Dockerin_1: domain 4 of 10, from 1395 to 1401: score 2.1, E = 17
CS -TT-SS-
*->DvNgDGk<-*
D+NgDG+
gi|1194861 1395 DLNGDGQ 1401
TSP_3: domain 6 of 30, from 1406 to 1418: score 6.5, E = 0.94
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+Dgv D d
gi|1194861 1406 IDTDKDGVP--DFQD 1418
Binary_toxB: domain 4 of 13, from 1418 to 1434: score 12.5, E = 0.0012
*->dlDtDnDgIPDlwEiNG<-*
dlD+DnDgIPD+ E G
gi|1194861 1418 DLDSDNDGIPDVIEAGG 1434
Excalibur: domain 2 of 9, from 1419 to 1427: score 4.1, E = 1.4
*->LDrDgDGiA<-*
LD D+DGi+
gi|1194861 1419 LDSDNDGIP 1427
TSP_3: domain 7 of 30, from 1419 to 1431: score 6.2, E = 1.2
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1419 LDSDNDGIP--DVIE 1431
TSP_3: domain 8 of 30, from 1435 to 1447: score 3.9, E = 5.5
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D+D+Dg D +
gi|1194861 1435 TDTDGDGLI--DGAN 1447
TSP_3: domain 9 of 30, from 1448 to 1460: score 6.5, E = 0.91
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+Dg Da d
gi|1194861 1448 IDTDGDGLA--DAVD 1460
Phage_tail_X: domain 1 of 1, from 1465 to 1479: score 2.7, E = 4.7
*->GtaveLPDiptttta<-*
Gtav++PDi +a
gi|1194861 1465 GTAVTIPDIDNDGVA 1479
TSP_3: domain 10 of 30, from 1471 to 1483: score 4.3, E = 4.3
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D DnDgv D d
gi|1194861 1471 PDIDNDGVA--DFRD 1483
Dockerin_1: domain 5 of 10, from 1472 to 1484: score 1.0, E = 36
CS -TT-SS--SHHHH
*->DvNgDGkVnalDl<-*
D+++DG+ + +Dl
gi|1194861 1472 DIDNDGVADFRDL 1484
Binary_toxB: domain 5 of 13, from 1483 to 1496: score 4.2, E = 0.28
*->dlDtDnDgIPDlwE<-*
dlD+DnDgI Dl E
gi|1194861 1483 DLDSDNDGISDLIE 1496
Excalibur: domain 3 of 9, from 1484 to 1491: score 1.2, E = 14
*->LDrDgDGi<-*
LD D+DGi
gi|1194861 1484 LDSDNDGI 1491
TSP_3: domain 11 of 30, from 1484 to 1496: score 6.7, E = 0.82
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1484 LDSDNDGIS--DLIE 1496
FG-GAP: domain 3 of 5, from 1497 to 1513: score 2.5, E = 9.9
CS CCSCEEEC-TTSSSSSE
*->fgssvaagDlnGDGrpD<-*
+g+ +a++D +G+G+ D
gi|1194861 1497 GGQDPAVVDTDGNGIVD 1513
NosD: domain 1 of 2, from 1514 to 1525: score 0.6, E = 25
*->GFSqtcvntDlDgDGIgDt<-*
G +D+DgDGI D+
gi|1194861 1514 G-------SDSDGDGILDV 1525
TSP_3: domain 12 of 30, from 1515 to 1530: score 6.1, E = 1.3
CS --TT-SSS-.. GGGS
*->eDsDnDgvgdn.DaCd<-*
DsD+Dg+ d D+ d
gi|1194861 1515 SDSDGDGILDViDEND 1530
Binary_toxB: domain 6 of 13, from 1540 to 1554: score 1.0, E = 2.4
*->dlDtDnDgIPDlwEi<-*
+D D+Dg PD Ei
gi|1194861 1540 LPDADGDGTPDYQEI 1554
TSP_3: domain 13 of 30, from 1554 to 1566: score 1.5, E = 29
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
Ds+nDg D+ +
gi|1194861 1554 IDSNNDGTP--DRVE 1566
Dockerin_1: domain 6 of 10, from 1577 to 1585: score 4.6, E = 2.9
CS -TT-SS--S
*->DvNgDGkVn<-*
Dv+gDG+++
gi|1194861 1577 DVDGDGQID 1585
efhand: domain 2 of 3, from 1577 to 1585: score 0.6, E = 51
CS TTTSSSEEH
*->DkDgDGkIs<-*
D+DgDG+I+
gi|1194861 1577 DVDGDGQID 1585
Binary_toxB: domain 7 of 13, from 1586 to 1598: score 1.5, E = 1.7
*->d.lDtDnDgIPDl<-*
d++D+D+Dg PD+
gi|1194861 1586 DpTDSDGDGVPDS 1598
TSP_3: domain 14 of 30, from 1588 to 1600: score 9.0, E = 0.17
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+DsD+Dgv D+ d
gi|1194861 1588 TDSDGDGVP--DSID 1600
Dockerin_1: domain 7 of 10, from 1589 to 1600: score 0.9, E = 39
CS -TT-SS--SHHH
*->DvNgDGkVnalD<-*
D +gDG+ +++D
gi|1194861 1589 DSDGDGVPDSID 1600
Excalibur: domain 4 of 9, from 1589 to 1596: score 0.0, E = 37
*->DrDgDGiA<-*
D DgDG++
gi|1194861 1589 DSDGDGVP 1596
Ad_cyc_g-alpha: domain 1 of 2, from 1615 to 1634: score 0.2, E = 30
*->pPltPtDnsfindgeseake<-*
+P+t ++ns+++d +s++++
gi|1194861 1615 QPPTVASNSIRVDVTSDNNN 1634
PKD: domain 1 of 2, from 1703 to 1719: score 0.8, E = 10
CS EEEETTCEEEEEEEEEEE
*->tvsngvgsasattttvtV<-*
+vs+gv++++ t + +tV
gi|1194861 1703 NVSDGVNTVTGT-VDITV 1719
Binary_toxB: domain 8 of 13, from 1723 to 1733: score 3.0, E = 0.63
*->dlDtDnDgIPD<-*
d D+D+DgIPD
gi|1194861 1723 DIDSDGDGIPD 1733
TSP_3: domain 15 of 30, from 1724 to 1736: score 6.3, E = 1.1
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsD+Dg+ D d
gi|1194861 1724 IDSDGDGIP--DIND 1736
Excalibur: domain 5 of 9, from 1725 to 1732: score 0.3, E = 29
*->DrDgDGiA<-*
D DgDGi+
gi|1194861 1725 DSDGDGIP 1732
TSP_3: domain 16 of 30, from 1737 to 1751: score 0.9, E = 44
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+DnD + d D+ +
gi|1194861 1737 LDDDNDAILDTDEGE 1751
Binary_toxB: domain 9 of 13, from 1751 to 1760: score 0.8, E = 2.7
*->dlDtDnDgIP<-*
D D+DgIP
gi|1194861 1751 EGDKDGDGIP 1760
Binary_toxB: domain 10 of 13, from 1764 to 1777: score 17.7, E = 3.9e-05
*->dlDtDnDgIPDlwE<-*
dlD+DnDgIPDl+E
gi|1194861 1764 DLDSDNDGIPDLYE 1777
Excalibur: domain 6 of 9, from 1765 to 1773: score 4.1, E = 1.4
*->LDrDgDGiA<-*
LD D+DGi+
gi|1194861 1765 LDSDNDGIP 1773
TSP_3: domain 17 of 30, from 1765 to 1777: score 5.3, E = 2.2
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1765 LDSDNDGIP--DLYE 1777
Excalibur: domain 7 of 9, from 1785 to 1795: score 0.6, E = 23
*->gtgDphkLDrDgDGi<-*
++ +LD DgDG+
gi|1194861 1785 AS----QLDTDGDGV 1795
efhand: domain 3 of 3, from 1786 to 1797: score 2.7, E = 14
CS HHHTTTSSSEEH
*->kefDkDgDGkIs<-*
+++D+DgDG I+
gi|1194861 1786 SQLDTDGDGVID 1797
TSP_3: domain 18 of 30, from 1788 to 1800: score 6.6, E = 0.86
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+Dgv D +
gi|1194861 1788 LDTDGDGVI--DPTN 1800
Dockerin_1: domain 8 of 10, from 1789 to 1797: score 0.2, E = 63
CS -TT-SS--S
*->DvNgDGkVn<-*
D +gDG+++
gi|1194861 1789 DTDGDGVID 1797
Vps4_C: domain 2 of 2, from 1799 to 1803: score 0.1, E = 15
CS HHTT-
*->TndFG<-*
TndFG
gi|1194861 1799 TNDFG 1803
FG-GAP: domain 4 of 5, from 1813 to 1829: score 7.0, E = 0.48
CS CCSCEEEC-TTSSSSSE
*->fgssvaagDlnGDGrpD<-*
++ ++ +D+nGDG pD
gi|1194861 1813 NPPESGQVDYNGDGQPD 1829
Dockerin_1: domain 9 of 10, from 1821 to 1827: score 0.3, E = 60
CS -TT-SS-
*->DvNgDGk<-*
D NgDG+
gi|1194861 1821 DYNGDGQ 1827
TSP_3: domain 19 of 30, from 1832 to 1844: score 0.4, E = 64
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+D+D D d
gi|1194861 1832 VDTDSDNTS--DFQD 1844
Excalibur: domain 8 of 9, from 1839 to 1852: score 1.5, E = 11
*->g.DphkLDrDgDGi<-*
++D LD D+DGi
gi|1194861 1839 TsDFQDLDSDNDGI 1852
Binary_toxB: domain 11 of 13, from 1844 to 1860: score 3.4, E = 0.47
*->dlDtDnDgIPDlwEiNG<-*
dlD+DnDgI D+ E G
gi|1194861 1844 DLDSDNDGINDVIEAGG 1860
TSP_3: domain 20 of 30, from 1845 to 1857: score 6.9, E = 0.7
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1845 LDSDNDGIN--DVIE 1857
Fil_haemagg: domain 2 of 2, from 1855 to 1943: score 0.1, E = 26
CS EEEE-S-EEESSE..................
*->tltaagllnnggtliaggdlllaagalrngg................
++ a+g++++ ++li g++++ +++ l+++ +++++++ + ++++++
gi|1194861 1855 VIEAGGTDTDNDGLIDGANTDTDGDGLADSVdpdnggtanippdtdn 1901
CS .EEEEESS-EEEEE
............................dltltaaGdLdnsg<-*
++ + ++ ++++++ ++ +++++++++ ++ +Gd+dn g
gi|1194861 1902 dgvadfrdldsdndgindiieggspdpdGDGVIGGGDIDNDG 1943
TSP_3: domain 21 of 30, from 1861 to 1873: score 4.8, E = 3.1
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D+DnDg D +
gi|1194861 1861 TDTDNDGLI--DGAN 1873
NosD: domain 2 of 2, from 1873 to 1884: score 3.4, E = 4.2
*->ntDlDgDGIgDt<-*
ntD+DgDG +D+
gi|1194861 1873 NTDTDGDGLADS 1884
TSP_3: domain 22 of 30, from 1874 to 1886: score 6.6, E = 0.86
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D+D+Dg D+ d
gi|1194861 1874 TDTDGDGLA--DSVD 1886
TSP_3: domain 23 of 30, from 1897 to 1909: score 6.9, E = 0.73
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+DnDgv D d
gi|1194861 1897 PDTDNDGVA--DFRD 1909
Binary_toxB: domain 12 of 13, from 1909 to 1922: score 1.1, E = 2.2
*->dlDtDnDgIPDlwE<-*
dlD+DnDgI D E
gi|1194861 1909 DLDSDNDGINDIIE 1922
Excalibur: domain 9 of 9, from 1910 to 1917: score 1.2, E = 14
*->LDrDgDGi<-*
LD D+DGi
gi|1194861 1910 LDSDNDGI 1917
TSP_3: domain 24 of 30, from 1910 to 1922: score 7.1, E = 0.63
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg+ D +
gi|1194861 1910 LDSDNDGIN--DIIE 1922
FG-GAP: domain 5 of 5, from 1930 to 1948: score 7.1, E = 0.44
CS CCSCEEEC-TTSSSSSEEE
*->fgssvaagDlnGDGrpDlv<-*
+ +++gD+++DG+pD+v
gi|1194861 1930 GDGVIGGGDIDNDGIPDIV 1948
TSP_3: domain 25 of 30, from 1937 to 1949: score 4.5, E = 3.7
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D DnDg+ D d
gi|1194861 1937 GDIDNDGIP--DIVD 1949
TSP_3: domain 26 of 30, from 1964 to 1976: score 2.8, E = 12
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+DnDg D d
gi|1194861 1964 PDTDNDGTP--DYQD 1976
TSP_3: domain 27 of 30, from 1977 to 1989: score 5.0, E = 2.7
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
DsDnDg D +
gi|1194861 1977 LDSDNDGTN--DIIE 1989
RNA_pol_Rpb8: domain 1 of 1, from 1985 to 1997: score 3.3, E = 1.6
CS EEEEEEEEEE-..
*->dDIFkVksvDPDG<-*
+DI++V DPDG
gi|1194861 1985 NDIIEVGLTDPDG 1997
TSP_3: domain 28 of 30, from 1993 to 2002: score 0.0, E = 83
CS --TT-SSS-..G
*->eDsDnDgvgdnD<-*
+D D+Dg+ D
gi|1194861 1993 TDPDGDGRL--D 2002
Dockerin_1: domain 10 of 10, from 1994 to 2005: score 0.0, E = 73
CS -TT-SS--SHHH
*->DvNgDGkVnalD<-*
D +gDG+ ++ D
gi|1194861 1994 DPDGDGRLDGAD 2005
TSP_3: domain 29 of 30, from 2004 to 2019: score 3.6, E = 7
CS --TT-SSS-.. GGGS
*->eDsDnDgvgdn.DaCd<-*
+D D+Dg+ ++ D d
gi|1194861 2004 ADNDSDGIPNAvDNND 2019
Ad_cyc_g-alpha: domain 2 of 2, from 2022 to 2047: score 3.9, E = 2.6
*->EGIltkPpPltPtDnsfindgeseake<-*
+G+ +++pPl +tDn++i+d +++++
gi|1194861 2022 FGN-SDTPPLPDTDNDGIPDFRDVDTP 2047
Binary_toxB: domain 13 of 13, from 2030 to 2040: score 6.1, E = 0.081
*->dlDtDnDgIPD<-*
+DtDnDgIPD
gi|1194861 2030 LPDTDNDGIPD 2040
TSP_3: domain 30 of 30, from 2031 to 2043: score 6.2, E = 1.1
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D+DnDg+ D d
gi|1194861 2031 PDTDNDGIP--DFRD 2043
EF_assoc_1: domain 1 of 1, from 2102 to 2122: score 2.7, E = 5.6
*->pWletpfpdttvtNekGglTL<-*
+++ p+ t+v+N+ G lT+
gi|1194861 2102 VVVSEPNQGTVVNNQNGTLTY 2122
Staphylcoagulse: domain 1 of 1, from 2105 to 2124: score 2.6, E = 8.2
*->setnAYnvtthadGtvsYGa<-*
se n v+ +++Gt +Y +
gi|1194861 2105 SEPNQGTVVNNQNGTLTYTP 2124
HYR: domain 2 of 2, from 2129 to 2155: score 3.6, E = 1.9
*->vGEettVtYtatDnaGNeAdsCtFtVtV<-*
+G + + Yt+ D+ GN + t+t+tV
gi|1194861 2129 IG-SDSFSYTVKDQDGNLSNIATVTITV 2155
PKD: domain 2 of 2, from 2137 to 2153: score 0.9, E = 9.9
CS EEEETTCEEEEEEEEEEE
*->tvsngvgsasattttvtV<-*
tv++ g+ s +tvt+
gi|1194861 2137 TVKDQDGNLSNI-ATVTI 2153
Cadherin: domain 1 of 1, from 2138 to 2156: score 4.8, E = 1.2
CS ----.........S---EEEE--EEE-
*->AtDadpllasgggpplsstatvtitVl<-*
++D+d +ls+ atvtitV
gi|1194861 2138 VKDQD--------GNLSNIATVTITVN 2156
Y_Y_Y: domain 1 of 1, from 2138 to 2156: score 3.1, E = 3.4
*->akdkdgnwsyddiasltftvl<-*
+kd dgn s+ a++t+tv+
gi|1194861 2138 VKDQDGNLSNI--ATVTITVN 2156
HemolysinCabind: domain 1 of 14, from 2200 to 2217: score 14.8, E = 0.0026
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+ +D+++ aGnDtl
gi|1194861 2200 VGTVNDDVITASAGNDTL 2217
HemolysinCabind: domain 2 of 14, from 2218 to 2235: score 10.6, E = 0.05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+Gn+ +y g G+D+
gi|1194861 2218 VSGDGNNLIYTGLGDDLV 2235
HemolysinCabind: domain 3 of 14, from 2236 to 2253: score 14.0, E = 0.0046
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ nDtLyG G Dtl
gi|1194861 2236 FSSTENDTLYGELGKDTL 2253
DUF1674: domain 1 of 1, from 2254 to 2262: score 0.7, E = 6.9
*->iGGpkGpEP<-*
iGGp G+EP
gi|1194861 2254 IGGPSGLEP 2262
HemolysinCabind: domain 4 of 14, from 2273 to 2290: score 8.0, E = 0.3
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++ D L G G Dtl
gi|1194861 2273 FGDENEDWLVGSFGQDTL 2290
HemolysinCabind: domain 5 of 14, from 2291 to 2308: score 6.8, E = 0.7
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
y G+ +D +Gg+ +D+
gi|1194861 2291 YSGKDDDKAFGGKDDDWV 2308
HemolysinCabind: domain 6 of 14, from 2309 to 2326: score 17.4, E = 0.00042
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G +GnDt G+ GnDt
gi|1194861 2309 MGEQGNDTVVGDMGNDTV 2326
RPH3A_effector: domain 1 of 1, from 2323 to 2332: score 0.2, E = 5.9
CS XXXXXXX....
*->MaDtvvsstqd<-*
+Dtv ++t++
gi|1194861 2323 -NDTVLGGTNN 2332
HemolysinCabind: domain 7 of 14, from 2348 to 2365: score 22.9, E = 9.2e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD ++G++ nDtl
gi|1194861 2348 FGGEGNDFMDGNEANDTL 2365
HemolysinCabind: domain 8 of 14, from 2366 to 2383: score 14.5, E = 0.0033
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G G+Dt +Gg+ nD+l
gi|1194861 2366 VAGVGDDTVHGGKQNDWL 2383
HemolysinCabind: domain 9 of 14, from 2384 to 2401: score 17.5, E = 0.00039
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G aGnD ++G+ GnD l
gi|1194861 2384 WGEAGNDMMFGDIGNDSL 2401
HemolysinCabind: domain 10 of 14, from 2403 to 2414: score 6.6, E = 0.76
CS --SSS-EEEEES
*->GGaGnDtLyGga<-*
GG+GnDtL+G++
gi|1194861 2403 GGEGNDTLRGDQ 2414
HemolysinCabind: domain 11 of 14, from 2433 to 2450: score 20.4, E = 5.1e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG GnD L+G++G Dtl
gi|1194861 2433 SGGVGNDLLFGDEGQDTL 2450
YbjN: domain 1 of 1, from 2438 to 2460: score 0.1, E = 8.6
*->ldlLfiGeeeeassasvkdp.aLH<-*
+dlLf G+e+++ ++d ++LH
gi|1194861 2438 NDLLF-GDEGQDTLCGGEDNdTLH 2460
HemolysinCabind: domain 12 of 14, from 2452 to 2468: score 13.5, E = 0.0063
CS --SSS-EEEEESSCGEE
*->GGaGnDtLyGgaGnDtl<-*
GG+ nDtL+Gg+ +D+l
gi|1194861 2452 GGEDNDTLHGGKDDDLL 2468
Urm1: domain 1 of 1, from 2458 to 2462: score -0.1, E = 1.6
CS -----
*->TLHGG<-*
TLHGG
gi|1194861 2458 TLHGG 2462
HemolysinCabind: domain 13 of 14, from 2469 to 2486: score 11.5, E = 0.025
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G G+D L G GnD l
gi|1194861 2469 KGCSGDDLLLGEMGNDSL 2486
HemolysinCabind: domain 14 of 14, from 2487 to 2504: score 24.2, E = 3.7e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GG+GnDtL+Gg+Gn+ +
gi|1194861 2487 VGGEGNDTLTGGEGNNYF 2504
DUF296: domain 1 of 1, from 2501 to 2517: score 1.2, E = 9.1
*->frphvlevdaGeeDivek<-*
+vle+d+G+ D++++
gi|1194861 2501 NNYFVLELDSGS-DWITD 2517
//