hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 119486636.fa
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Query sequence: gi|119486636|ref|ZP_01620686.1|
Accession: [none]
Description: hypothetical protein L8106_12835 [Lyngbya sp. PCC 8106]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 181.7 6.5e-54 15
Cna_B Cna protein B-type domain 116.8 2.5e-35 5
EMP24_GP25L emp24/gp25L/p24 family/GOLD 12.4 0.0048 2
PKD PKD domain 10.1 0.015 4
A2M_N Alpha-2-macroglobulin family N-termin 8.4 0.03 3
TEP1_N TEP1 N-terminal domain 8.8 0.12 1
KcnmB2_inactiv KCNMB2, ball and chain domain 6.4 0.13 1
Pox_N2L Poxvirus N2L protein 5.4 0.26 1
Phage_Capsid_P3 P3 major capsid protein 3.9 0.28 2
DUF571 Protein of unknown function (DUF571) 4.1 0.34 1
He_PIG Putative Ig domain 6.2 0.57 3
DUF2425 Protein of unknown function (DUF2425) 2.3 0.73 1
I-set Immunoglobulin I-set domain 5.3 0.81 1
DUF2271 Predicted periplasmic protein (DUF227 4.2 0.87 2
COLFI Fibrillar collagen C-terminal domain 1.0 0.95 1
Herpes_gE Alphaherpesvirus glycoprotein E 1.5 1 1
DUF1769 Protein of unknown function (DUF1769) 5.0 1.2 1
Bin3 Bicoid-interacting protein 3 (Bin3) 3.5 1.2 1
Adeno_E1B_55K_N Adenovirus E1B protein N-terminus 5.4 1.2 2
VirK VirK protein 4.0 1.4 1
DUF2416 Protein of unknown function (DUF2416) 2.4 1.5 1
RE_AccI AccI restriction endonuclease 1.7 1.6 1
Synapsin Synapsin, N-terminal domain 2.7 1.6 1
Calsarcin Calcineurin-binding protein (Calsarci 0.5 1.9 1
FlgD Flagellar hook capping protein 2.8 2 2
Big_1 Bacterial Ig-like domain (group 1) 2.5 2.2 2
Autotransporter Autotransporter beta-domain 2.5 2.6 1
RyR RyR domain 3.6 2.7 2
AbfB Alpha-L-arabinofuranosidase B (ABFB) 2.2 2.8 2
Triadin Triadin 0.9 3.1 1
FAINT Domain of unknown function, DUF529 2.6 3.4 1
Ephrin_lbd Ephrin receptor ligand binding domain 1.7 3.8 1
Prion Prion/Doppel alpha-helical domain 2.1 4 1
Integrin_b_cyt Integrin beta cytoplasmic domain 3.2 4.1 2
Metalloenzyme Metalloenzyme superfamily 2.1 4.4 1
DUF1880 Domain of unknown function (DUF1880) -0.6 4.6 1
Rubella_E1 Rubella membrane glycoprotein E1 -1.2 4.7 1
FlaA Flagellar filament outer layer protei 1.1 5 1
M-factor M-factor 2.1 6.4 2
Na_H_Exchanger Sodium/hydrogen exchanger family 0.9 6.6 1
HrpB2 Bacterial type III secretion protein -0.4 6.7 1
DUF963 Schizosaccharomyces pombe repeat of u 3.2 6.9 1
PPV_E2_N E2 (early) protein, N terminal 1.1 7.1 1
Big_2 Bacterial Ig-like domain (group 2) 1.9 7.2 1
P53_TAD P53 transactivation motif 2.8 7.2 2
MucBP MucBP domain 2.2 7.6 2
Tir_receptor_N Translocated intimin receptor (Tir) N 0.1 7.6 1
OmpA_membrane OmpA-like transmembrane domain 0.6 8.7 1
RteC RteC protein 0.5 8.8 1
DUF1036 Protein of unknown function (DUF1036) 0.2 8.9 1
DUF2240 Uncharacterized protein conserved in 1.0 8.9 2
DUF436 Protein of unknown function (DUF436) -0.3 9.2 1
Adeno_shaft Adenoviral fibre protein (repeat/shaf 3.4 9.2 1
DUF464 Protein of unknown function (DUF464) 0.4 9.5 1
Thermopsin Thermopsin -0.7 9.5 1
CRPV_capsid CRPV capsid protein like -0.2 9.6 1
V-set_CD47 CD47 immunoglobulin-like domain 0.6 9.7 1
DZF DZF -0.5 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
KcnmB2_inactiv 1/1 1 23 [. 1 24 [. 6.4 0.13
Synapsin 1/1 40 64 .. 1 25 [. 2.7 1.6
Cna_B 1/5 66 85 .. 1 17 [. 2.5 3.2
Ephrin_lbd 1/1 70 78 .. 1 9 [. 1.7 3.8
DUF464 1/1 72 94 .. 86 108 .] 0.4 9.5
DUF436 1/1 82 98 .. 1 17 [. -0.3 9.2
RyR 1/2 134 147 .. 82 95 .] 2.8 4.4
RteC 1/1 150 165 .. 148 163 .. 0.5 8.8
Bin3 1/1 187 195 .. 1 9 [. 3.5 1.2
OmpA_membrane 1/1 229 238 .. 246 255 .] 0.6 8.7
DUF2425 1/1 257 280 .. 637 663 .] 2.3 0.73
Calsarcin 1/1 346 363 .. 291 312 .] 0.5 1.9
Rubella_E1 1/1 384 398 .. 1 16 [. -1.2 4.7
FAINT 1/1 583 647 .. 1 116 [] 2.6 3.4
PKD 1/4 618 632 .. 77 92 .] 1.5 6.2
I-set 1/1 620 630 .. 86 96 .] 5.3 0.81
Na_H_Exchanger 1/1 620 643 .. 416 445 .] 0.9 6.6
MucBP 1/2 655 676 .. 1 22 [. 2.1 8.1
Cna_B 2/5 658 722 .. 1 77 [] 29.3 1.9e-08
DUF571 1/1 662 687 .. 1 30 [. 4.1 0.34
FlaA 1/1 666 690 .. 119 142 .. 1.1 5
He_PIG 1/3 674 687 .. 39 52 .. 1.0 17
He_PIG 2/3 694 716 .. 1 34 [. 1.0 17
Big_1 1/2 708 732 .. 80 106 .] 0.9 7.3
HrpB2 1/1 711 731 .. 1 24 [. -0.4 6.7
RyR 2/2 733 739 .. 1 7 [. 0.8 16
M-factor 1/2 744 758 .. 1 18 [. 1.0 13
P53_TAD 1/2 755 771 .. 1 17 [. 1.4 18
DUF1880 1/1 804 815 .. 1 12 [. -0.6 4.6
Integrin_b_cyt 1/2 820 825 .. 41 46 .] 1.8 11
DUF1036 1/1 827 835 .. 126 134 .] 0.2 8.9
EMP24_GP25L 1/2 828 922 .. 26 72 .. 7.1 0.16
PKD 2/4 833 848 .. 76 92 .] 1.9 4.7
DUF2416 1/1 841 856 .. 1 16 [. 2.4 1.5
Adeno_E1B_55K_N 1/2 851 861 .. 63 73 .] 2.7 6.6
FlgD 1/2 881 903 .. 128 155 .] 0.8 8.7
A2M_N 1/3 884 913 .. 29 64 .. 1.4 3.1
Big_1 2/2 884 928 .. 41 96 .. 1.6 4.2
Cna_B 3/5 884 957 .. 1 77 [] 23.7 9.4e-07
AbfB 1/2 909 931 .. 1 32 [. 1.1 5.9
DUF2240 1/2 918 936 .. 59 77 .. 0.5 12
A2M_N 2/3 993 1062 .. 29 140 .. 4.6 0.38
Cna_B 4/5 993 1057 .. 1 77 [] 35.0 3.3e-10
DUF2271 1/2 1020 1033 .. 99 112 .. 3.0 1.9
He_PIG 3/3 1022 1040 .. 43 61 .] 4.2 2.1
COLFI 1/1 1044 1062 .. 149 167 .. 1.0 0.95
M-factor 2/2 1081 1095 .. 1 18 [. 1.0 13
P53_TAD 2/2 1092 1108 .. 1 17 [. 1.4 18
Phage_Capsid_P3 1/2 1139 1148 .. 1 10 [. 3.0 0.49
Integrin_b_cyt 2/2 1157 1162 .. 41 46 .] 1.4 14
Triadin 1/1 1157 1173 .. 1 18 [. 0.9 3.1
EMP24_GP25L 2/2 1165 1260 .. 26 72 .. 5.3 0.49
Adeno_E1B_55K_N 2/2 1189 1199 .. 63 73 .] 2.7 6.6
FlgD 2/2 1219 1241 .. 128 155 .] 2.0 3.5
A2M_N 3/3 1222 1251 .. 29 64 .. 2.5 1.5
Cna_B 5/5 1222 1286 .. 1 77 [] 26.3 1.6e-07
Thermopsin 1/1 1237 1248 .. 292 302 .] -0.7 9.5
AbfB 2/2 1247 1269 .. 1 32 [. 1.1 5.9
DUF2240 2/2 1256 1274 .. 59 77 .. 0.5 12
Metalloenzyme 1/1 1277 1302 .. 93 118 .] 2.1 4.4
PKD 3/4 1310 1346 .. 50 92 .] 0.9 9.8
VirK 1/1 1334 1352 .. 108 129 .] 4.0 1.4
Pox_N2L 1/1 1341 1364 .. 1 28 [. 5.4 0.26
PPV_E2_N 1/1 1362 1381 .. 186 205 .] 1.1 7.1
Big_2 1/1 1365 1400 .. 53 90 .] 1.9 7.2
DUF2271 2/2 1396 1408 .. 142 154 .] 1.2 6.5
DUF963 1/1 1420 1431 .. 25 36 .] 3.2 6.9
DZF 1/1 1422 1439 .. 171 188 .. -0.5 9.8
Autotransporter 1/1 1486 1514 .. 269 296 .] 2.5 2.6
PKD 4/4 1504 1520 .. 75 92 .] 5.7 0.32
CRPV_capsid 1/1 1587 1601 .. 1 17 [. -0.2 9.6
V-set_CD47 1/1 1593 1612 .. 115 136 .] 0.6 9.7
Phage_Capsid_P3 2/2 1603 1611 .. 1 10 [. 0.8 2.1
Tir_receptor_N 1/1 1611 1626 .. 257 272 .] 0.1 7.6
MucBP 2/2 1630 1640 .. 98 108 .] 0.1 27
HemolysinCabind 1/15 1707 1724 .. 1 18 [] 4.6 3.3
HemolysinCabind 2/15 1725 1741 .. 1 17 [. 9.8 0.087
HemolysinCabind 3/15 1743 1760 .. 1 18 [] 19.7 8.1e-05
HemolysinCabind 4/15 1782 1797 .. 1 16 [. 9.0 0.14
HemolysinCabind 5/15 1800 1815 .. 1 16 [. 0.6 53
HemolysinCabind 6/15 1818 1835 .. 1 18 [] 21.9 1.8e-05
HemolysinCabind 7/15 1859 1876 .. 1 18 [] 19.8 8e-05
HemolysinCabind 8/15 1877 1894 .. 1 18 [] 13.6 0.0059
RE_AccI 1/1 1885 1911 .. 66 92 .. 1.7 1.6
HemolysinCabind 9/15 1895 1912 .. 1 18 [] 20.7 4.2e-05
HemolysinCabind 10/15 1914 1924 .. 2 12 .. 6.2 1.1
Herpes_gE 1/1 1929 1950 .. 493 514 .] 1.5 1
HemolysinCabind 11/15 1936 1949 .. 5 18 .] 12.8 0.01
Prion 1/1 1943 1957 .. 1 15 [. 2.1 4
DUF1769 1/1 1945 1953 .. 1 9 [. 5.0 1.2
HemolysinCabind 12/15 1950 1967 .. 1 18 [] 9.2 0.12
HemolysinCabind 13/15 1968 1985 .. 1 18 [] 15.1 0.0021
HemolysinCabind 14/15 1986 2003 .. 1 18 [] 17.9 0.00029
HemolysinCabind 15/15 2004 2014 .. 8 18 .] 0.8 45
Adeno_shaft 1/1 2025 2033 .. 22 30 .] 3.4 9.2
TEP1_N 1/1 2032 2061 .. 1 30 [] 8.8 0.12
Alignments of top-scoring domains:
KcnmB2_inactiv: domain 1 of 1, from 1 to 23: score 6.4, E = 0.13
CS TS-S-XXXXXXSSSSXSTTSSHHH
*->mFivkSgrtsdsyrstekRsIYqk<-*
m + kSg ts s +st + +I+qk
gi|1194866 1 MTFSKSGTTSTS-YSTISSNIFQK 23
Synapsin: domain 1 of 1, from 40 to 64: score 2.7, E = 1.6
CS ---E...EEEEES-TTS-HHHHHTT
*->vakrkakvLLviDdpHtDWsKyFrG<-*
v +rk +L+v+D D K +G
gi|1194866 40 VCARKIDILVVVDAQVEDTEKLLKG 64
Cna_B: domain 1 of 5, from 66 to 85: score 2.5, E = 3.2
CS -TT-EEEEEETTEEE E-
*->LeGAeftLldkdgnv...tT<-*
++GAe+ Lld++++ +++T
gi|1194866 66 ISGAEVILLDSTKDGvkqIT 85
Ephrin_lbd: domain 1 of 1, from 70 to 78: score 1.7, E = 3.8
*->EvtLLDtkt<-*
Ev+LLD+++
gi|1194866 70 EVILLDSTK 78
DUF464: domain 1 of 1, from 72 to 94: score 0.4, E = 9.5
*->llLetlllgLktIeeqYpeyIkv<-*
+lL++ + g k+I ey ++
gi|1194866 72 ILLDSTKDGVKQITHALREYTEI 94
DUF436: domain 1 of 1, from 82 to 98: score -0.3, E = 9.2
*->eqlqqaleElleqagLk<-*
+q + al E++e+++L+
gi|1194866 82 KQITHALREYTEISELQ 98
RyR: domain 1 of 2, from 134 to 147: score 2.8, E = 4.4
*->tLLayGynverade<-*
tL+ yG+nv ++d
gi|1194866 134 TLILYGCNVAAGDA 147
RteC: domain 1 of 1, from 150 to 165: score 0.5, E = 8.8
*->evaekplrWTgtKiaL<-*
e+ ek++++Tg Kia+
gi|1194866 150 EFIEKLHQFTGAKIAA 165
Bin3: domain 1 of 1, from 187 to 195: score 3.5, E = 1.2
*->eFDvILcLS<-*
eFDv L+LS
gi|1194866 187 EFDVTLALS 195
OmpA_membrane: domain 1 of 1, from 229 to 238: score 0.6, E = 8.7
CS EEEEECSSXS
*->GiSYRFGqge<-*
Gi Y FGqg+
gi|1194866 229 GIIYNFGQGS 238
DUF2425: domain 1 of 1, from 257 to 280: score 2.3, E = 0.73
*->GsLnmFFRtFslhmv.egEVnrGLrqvV<-*
G Ln +F l+ v+++E + GLrq+V
gi|1194866 257 GVLN----NFKLRRVdNPEGVQGLRQIV 280
Calsarcin: domain 1 of 1, from 346 to 363: score 0.5, E = 1.9
*->vvitvePtDDislPLDGESEeL<-*
v++ tD slP SE+L
gi|1194866 346 VDYIS--TDGLSLP--QDSEDL 363
Rubella_E1: domain 1 of 1, from 384 to 398: score -1.2, E = 4.7
*->LtAvvLqGYnPPAYGE<-*
+tAv qG nP AYG+
gi|1194866 384 ITAVDDQG-NPTAYGD 398
FAINT: domain 1 of 1, from 583 to 647: score 2.6, E = 3.4
*->tLDlnnsessnkksstdefdyikvhlslsngvnyktytpksgykrfs
t+D ++ ++ + ++++ytp+ g+
gi|1194866 583 TVDDRGTPDDPTD-------------------DVIVYTPNFGF---- 606
kVnkdtvNiSqygneglitsgdtviWeskdgeelskvvvvylkdkkkvlv
g e d +++ +dge++ +++v+ +++ +v
gi|1194866 607 -----------NGAE------DSFVYQITDGEDTTTATVTVTVTSTIV-- 637
nslNpkskylvlllinnsk<-*
++++++
gi|1194866 638 ---------GGTVFTDTDG 647
PKD: domain 1 of 4, from 618 to 632: score 1.5, E = 6.2
CS EETTCEEEEEEEEEEE
*->sngvgsasattttvtV<-*
++g +++at +tvtV
gi|1194866 618 TDGEDTTTAT-VTVTV 632
I-set: domain 1 of 1, from 620 to 630: score 5.3, E = 0.81
CS EEEEEEEEEEE
*->GeaeasaeLtV<-*
Ge++++a++tV
gi|1194866 620 GEDTTTATVTV 630
Na_H_Exchanger: domain 1 of 1, from 620 to 643: score 0.9, E = 6.6
CS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
*->dreliytllvivvllttlvqGltlkpllkk<-*
++++ t++v+v++ +t+ ++ +++
gi|1194866 620 GEDT-TTATVTVTVTSTI-----VGGTVFT 643
MucBP: domain 1 of 2, from 655 to 676: score 2.1, E = 8.1
*->ltktvtvTvhYvDedGnelapd<-*
+ + +++Tv+ vD +Gn++ ++
gi|1194866 655 EPRLGNITVNLVDDQGNPVGTP 676
Cna_B: domain 2 of 5, from 658 to 722: score 29.3, E = 1.9e-08
CS -TT-EEEEEETTEEE E--TTSEEEEEEE....-SEEEEEEEE
*->LeGAeftLldkdgnv.....tTdenGkytftnLPKykppGdYtvkEt
L ++++ L+d+ gn +++ T ++G y+f++ +pG+Ytv+
gi|1194866 658 LGNITVNLVDDQGNPvgtpaETSADGVYQFEGF----APGEYTVEVD 700
CS E.TTEEEEEEEEESSS-............EEEEEE
klAPtGYtltttpveftitensdgeeekivtvtit<-*
+ t + p+++t + +s v+vt+
gi|1194866 701 T------TDEDLPTGVTLGTDS-------VPVTVA 722
DUF571: domain 1 of 1, from 662 to 687: score 4.1, E = 0.34
*->vvrllasrledkgededagadgtaagrwsL<-*
+v l+ +d g +++++a+ a g++++
gi|1194866 662 TVNLV----DDQGNPVGTPAETSADGVYQF 687
FlaA: domain 1 of 1, from 666 to 690: score 1.1, E = 5
*->vDDQGNlQePTaengasG.gqFdGk<-*
vDDQGN ae a+G qF+G+
gi|1194866 666 VDDQGNPVGTPAETSADGvYQFEGF 690
He_PIG: domain 1 of 3, from 674 to 687: score 1.0, E = 17
*->GtPtptvqpGsytf<-*
GtP++t++ G+y+f
gi|1194866 674 GTPAETSADGVYQF 687
He_PIG: domain 2 of 3, from 694 to 716: score 1.0, E = 17
*->tytlTkpsdgslasysttpggggLPsGLtLdsst<-*
yt+ + +++ LP+G tL ++
gi|1194866 694 EYTV-----------EVDTTDEDLPTGVTLGTDS 716
Big_1: domain 1 of 2, from 708 to 732: score 0.9, E = 7.3
CS E-SS-EEEEEEEEET.TECEEEEEEEE
*->TstkaGtytVtAslanngatsvdaktV<-*
T+ + Gt+ V +++a+n+ ++ ++++
gi|1194866 708 TGVTLGTDSVPVTVAANQPVT--EVNF 732
HrpB2: domain 1 of 1, from 711 to 731: score -0.4, E = 6.7
*->aagtaAaaPvapavpqeLvPheve<-*
++gt++++ +++a +q++ ev+
gi|1194866 711 TLGTDSVPVTVAA-NQPVT--EVN 731
RyR: domain 2 of 2, from 733 to 739: score 0.8, E = 16
*->gfnPqPv<-*
gf+P+Pv
gi|1194866 733 GFDPAPV 739
M-factor: domain 1 of 2, from 744 to 758: score 1.0, E = 13
*->MDSiAtsvsSSSvVNAyN<-*
iA +v SSS+ N N
gi|1194866 744 ---IAQNVESSSIPNNSN 758
P53_TAD: domain 1 of 2, from 755 to 771: score 1.4, E = 18
*->meeenieLPLSQETFeD<-*
+i LPLS + F+D
gi|1194866 755 NNSNSIALPLSTDNFSD 771
DUF1880: domain 1 of 1, from 804 to 815: score -0.6, E = 4.6
*->vqiLtDEqFDRL<-*
vq+Lt q D L
gi|1194866 804 VQLLTPNQLDNL 815
Integrin_b_cyt: domain 1 of 2, from 820 to 825: score 1.8, E = 11
CS -TT---
*->NPtYag<-*
NPtY+g
gi|1194866 820 NPTYQG 825
DUF1036: domain 1 of 1, from 827 to 835: score 0.2, E = 8.9
*->ksWtvqLtD<-*
+s+t+q tD
gi|1194866 827 ASFTYQVTD 835
EMP24_GP25L: domain 1 of 2, from 828 to 922: score 7.1, E = 0.16
*->tgsYqVi........................................
+++YqV ++++ ++ + + + +++++++++ +++ ++++++
gi|1194866 828 SFTYQVTdddgavsdianitipvaaagggtpsnstvsgtvftdndnn 874
...........didvtvkdPfdngkrvlykkerkseGdftFtalesGeYk
++ ++++++ ++i+v + +++ g v+++ + ++G ++F + sG+Y+
gi|1194866 875 ntlspdepgieNITVNLVNTN--GT-VVDSVDTNADGVYQFESVASGDYT 921
f<-*
+
gi|1194866 922 V 922
PKD: domain 2 of 4, from 833 to 848: score 1.9, E = 4.7
CS EEETTCEEEEEEEEEEE
*->vsngvgsasattttvtV<-*
v+++ g++s +++t+
gi|1194866 833 VTDDDGAVSDI-ANITI 848
DUF2416: domain 1 of 1, from 841 to 856: score 2.4, E = 1.5
*->qplaqtPiPAwaqsGa<-*
+ +a+ +iP++a++G+
gi|1194866 841 SDIANITIPVAAAGGG 856
Adeno_E1B_55K_N: domain 1 of 2, from 851 to 861: score 2.7, E = 6.6
*->aaaaGgEPeEp<-*
aaa+Gg P+++
gi|1194866 851 AAAGGGTPSNS 861
FlgD: domain 1 of 2, from 881 to 903: score 0.8, E = 8.7
*->psaAdevtvtikDaaGqvvnvelVrtid<-*
+ + ++ tv + + +G+v V ++d
gi|1194866 881 EPGIENITVNLVNTNGTV-----VDSVD 903
A2M_N: domain 1 of 3, from 884 to 913: score 1.4, E = 3.1
CS EEE-EEEEE................S-SS-EEEEEE
*->vegvcVqllsrnnqvsdcggklatgtTDadGevtft<-*
+e+++V+l++ n+ v + + T+adG+++f+
gi|1194866 884 IENITVNLVNTNGTV------VDSVDTNADGVYQFE 913
Big_1: domain 2 of 2, from 884 to 928: score 1.6, E = 4.2
CS -TT-EEEE.....EESSSEES-S.E.EEE-TTSEEEEEEE-SS-EEE
*->VagqeVtFtvpsdvsssgtlsngntkatTdanGkAtvtLTstkaGty
+++++V++ v ++gt+ ++ + T+a+G++++ s +G+y
gi|1194866 884 IENITVNL-----VNTNGTVVDS---VDTNADGVYQFE--SVASGDY 920
CS EEEEEET.T
tVtAslann<-*
tV+ +++ +
gi|1194866 921 TVEIDTT-D 928
Cna_B: domain 3 of 5, from 884 to 957: score 23.7, E = 9.4e-07
CS -TT-EEEEEETTEEE E--TTSEEEEEEE....-SEEEEEEEEE
*->LeGAeftLldkdgnv....tTdenGkytftnLPKykppGdYtvkEtk
+e++++ L++ +g+v ++ T+++G y+f+ ++GdYtv+ +
gi|1194866 884 IENITVNLVNTNGTVvdsvDTNADGVYQFESV----ASGDYTVEIDT 926
CS .TTEEEEEEEEESSS-............EEEEEE
...lAPtGYtltttpveftitensdgeeekivtvtit<-*
+++++P+ +tl t ++ ++ + + ++++
gi|1194866 927 tdtDIPADFTLGTLNNVSVPVDANQ------SVTDVN 957
AbfB: domain 1 of 2, from 909 to 931: score 1.1, E = 5.9
CS EE.EEE-STT-TTEEEEEETTEEEEEE--TTS
*->vsPlrvtSvnYpdRYiahsgstvntqvVsSss<-*
v+ +++Sv a +++tv ++ ++++
gi|1194866 909 VY--QFESV-------ASGDYTVEIDTTDTDI 931
DUF2240: domain 1 of 2, from 918 to 936: score 0.5, E = 12
*->GdlvplFDvasveIPlGFk<-*
Gd+++ D+++++IP++F+
gi|1194866 918 GDYTVEIDTTDTDIPADFT 936
A2M_N: domain 2 of 3, from 993 to 1062: score 4.6, E = 0.38
CS EEE-EEEEE................S-SS-EEEEEEE...EESSS--
*->vegvcVqllsrnnqvsdcggklatgtTDadGevtftvslsldhplrg
+e+++V+l++ n+++ la+ T+adG ++f++
gi|1194866 993 IENITVNLVNTNGNI------LASVPTNADGGYQFEG---------- 1023
CS SB---EEEE-GGGTT..EE-EEEB--.......------------EEEEE
tlseapvlltarnggdaqavtleidlfrCqaspdffflplrgrgdyaldl
+ +++++ d++ +l + + +
gi|1194866 1024 -VAPGNYTVVV----------------------DTTDTDL---PTDVTLG 1047
CS EEE.........TTE
sdfdvgiesggglvf<-*
+++dv+i+ + +f
gi|1194866 1048 TSSDVEINVEANQPF 1062
Cna_B: domain 4 of 5, from 993 to 1057: score 35.0, E = 3.3e-10
CS -TT-EEEEEETTEEE E--TTSEEEEEEE....-SEEEEEEEEE
*->LeGAeftLldkdgnv....tTdenGkytftnLPKykppGdYtvkEtk
+e++++ L++ +gn+ + T+++G y+f++ +pG+Ytv
gi|1194866 993 IENITVNLVNTNGNIlasvPTNADGGYQFEGV----APGNYTV---- 1031
CS .TTEEEEEEEEESSS-............EEEEEE
lAPtGYtltttpveftitensdgeeekivtvtit<-*
+ t t+ p+++t + sd v +++
gi|1194866 1032 --VVDTTDTDLPTDVTLGTSSD------VEINVE 1057
DUF2271: domain 1 of 2, from 1020 to 1033: score 3.0, E = 1.9
*->plkkLppGeYtLvV<-*
+++ ++pG+Yt+vV
gi|1194866 1020 QFEGVAPGNYTVVV 1033
He_PIG: domain 3 of 3, from 1022 to 1040: score 4.2, E = 2.1
*->ptvqpGsytftvtatdgsg<-*
++v+pG+yt+ v td+
gi|1194866 1022 EGVAPGNYTVVVDTTDTDL 1040
COLFI: domain 1 of 1, from 1044 to 1062: score 1.0, E = 0.95
*->lilmgSnDvElsadgnskF<-*
+ l +S+DvE++ ++n +F
gi|1194866 1044 VTLGTSSDVEINVEANQPF 1062
M-factor: domain 2 of 2, from 1081 to 1095: score 1.0, E = 13
*->MDSiAtsvsSSSvVNAyN<-*
iA +v SSS+ N N
gi|1194866 1081 ---IAQNVESSSIPNNSN 1095
P53_TAD: domain 2 of 2, from 1092 to 1108: score 1.4, E = 18
*->meeenieLPLSQETFeD<-*
+i LPLS + F+D
gi|1194866 1092 NNSNSIALPLSTDNFSD 1108
Phage_Capsid_P3: domain 1 of 2, from 1139 to 1148: score 3.0, E = 0.49
CS ----------
*->AqvqqLtPAq<-*
qvqqLtP q
gi|1194866 1139 SQVQQLTPNQ 1148
Integrin_b_cyt: domain 2 of 2, from 1157 to 1162: score 1.4, E = 14
CS -TT---
*->NPtYag<-*
NPtY+g
gi|1194866 1157 NPTYEG 1162
Triadin: domain 1 of 1, from 1157 to 1173: score 0.9, E = 3.1
*->tEitAEGnAsitttviDs<-*
t EGnAs+t v D+
gi|1194866 1157 -NPTYEGNASLTYQVTDN 1173
EMP24_GP25L: domain 2 of 2, from 1165 to 1260: score 5.3, E = 0.49
*->tgsYqVi........................................
+ +YqV ++++ +++ + + + +++++++++ +++ +++++
gi|1194866 1165 SLTYQVTdndgatsdlasitipvaaaagggtpsnstvsgtvftdndn 1211
............didvtvkdPfdngkrvlykkerkseGdftFtalesGeY
+++ ++++++ +di+v + d + g v+++ e +G ++F + sG+Y
gi|1194866 1212 ndtldpsepgieDITVNLVDQN--GT-VVDTAETSVDGVYQFESVASGDY 1258
kf<-*
++
gi|1194866 1259 TV 1260
Adeno_E1B_55K_N: domain 2 of 2, from 1189 to 1199: score 2.7, E = 6.6
*->aaaaGgEPeEp<-*
aaa+Gg P+++
gi|1194866 1189 AAAGGGTPSNS 1199
FlgD: domain 2 of 2, from 1219 to 1241: score 2.0, E = 3.5
*->psaAdevtvtikDaaGqvvnvelVrtid<-*
+ + ++ tv + D++G+v V t +
gi|1194866 1219 EPGIEDITVNLVDQNGTV-----VDTAE 1241
A2M_N: domain 3 of 3, from 1222 to 1251: score 2.5, E = 1.5
CS EEE-EEEEE................S-SS-EEEEEE
*->vegvcVqllsrnnqvsdcggklatgtTDadGevtft<-*
+e+++V+l+++n+ v + t++T dG+++f+
gi|1194866 1222 IEDITVNLVDQNGTV------VDTAETSVDGVYQFE 1251
Cna_B: domain 5 of 5, from 1222 to 1286: score 26.3, E = 1.6e-07
CS -TT-EEEEEETTEEE E--TTSEEEEEEE....-SEEEEEEEEE
*->LeGAeftLldkdgnv....tTdenGkytftnLPKykppGdYtvkEtk
+e++++ L+d +g+v ++ T +G y+f+ ++GdYtv+ +
gi|1194866 1222 IEDITVNLVDQNGTVvdtaETSVDGVYQFESV----ASGDYTVEIDT 1264
CS .TTEEEEEEEEESSS-............EEEEEE
...lAPtGYtltttpveftitensdgeeekivtvtit<-*
+++++P+ +tl t+++ v+vt++
gi|1194866 1265 tdtDIPADFTLGTPNN---------------VPVTVV 1286
Thermopsin: domain 1 of 1, from 1237 to 1248: score -0.7, E = 9.5
*->fDTaEs.synVa<-*
+DTaE+++++V+
gi|1194866 1237 VDTAETsVDGVY 1248
AbfB: domain 2 of 2, from 1247 to 1269: score 1.1, E = 5.9
CS EE.EEE-STT-TTEEEEEETTEEEEEE--TTS
*->vsPlrvtSvnYpdRYiahsgstvntqvVsSss<-*
v+ +++Sv a +++tv ++ ++++
gi|1194866 1247 VY--QFESV-------ASGDYTVEIDTTDTDI 1269
DUF2240: domain 2 of 2, from 1256 to 1274: score 0.5, E = 12
*->GdlvplFDvasveIPlGFk<-*
Gd+++ D+++++IP++F+
gi|1194866 1256 GDYTVEIDTTDTDIPADFT 1274
Metalloenzyme: domain 1 of 1, from 1277 to 1302: score 2.1, E = 4.4
CS B--EEEEEE--TT----SEEETTHHH
*->TrepVPlliygkgvkkdqvgrfnefa<-*
T + VP++++ +dq+++f++++
gi|1194866 1277 TPNNVPVTVVANQSVPDQNFGFDSTS 1302
PKD: domain 3 of 4, from 1310 to 1346: score 0.9, E = 9.8
CS EECSSEEEEEESS....SEEEEEEEEEEETTCEEEEEEEEEEE
*->tstepnvtHtYskgsVtpGtYtVtLtvsngvgsasattttvtV<-*
t t++nv+ t+++ + ++++t +vs+ g++++ tt+
gi|1194866 1310 TATNQNVNTTFET----TASFDLTDNVSDPDGTVDL--TTIDL 1346
VirK: domain 1 of 1, from 1334 to 1352: score 4.0, E = 1.4
*->rpdGtaefttyRYPvlsvptye<-*
+pdGt++ tt+ l+++t+e
gi|1194866 1334 DPDGTVDLTTI---DLDPTTPE 1352
Pox_N2L: domain 1 of 1, from 1341 to 1364: score 5.4, E = 0.26
*->lsdsdiDntedeiveivldetlLPegss<-*
l+ d+D+t +ei + v tl P+g++
gi|1194866 1341 LTTIDLDPTTPEIDQQV---TL-PQGTF 1364
PPV_E2_N: domain 1 of 1, from 1362 to 1381: score 1.1, E = 7.1
CS S-EEEECTTCEEE--S----
*->GtWeVhvggqvIycPvsvsS<-*
Gt +V +gqv ++P+ +S
gi|1194866 1362 GTFTVNNQGQVTFAPAGNFS 1381
Big_2: domain 1 of 1, from 1365 to 1400: score 1.9, E = 7.2
CS EEE....TTTEEE EE-SSS-EEEEEEETT.TEEEEEEE
*->tVsntnSgstGlV....talakGtatItatsgdgnksasvtv<-*
tV+ ++G+V+ + ++ Gt+t+ t +d n +a+ +
gi|1194866 1365 TVN-----NQGQVtfapAGNFSGTVTVPYTIQD-NLGATSEL 1400
DUF2271: domain 2 of 2, from 1396 to 1408: score 1.2, E = 6.5
*->GtsELGavtlelk<-*
+tsEL +++++++
gi|1194866 1396 ATSELADISVTVS 1408
DUF963: domain 1 of 1, from 1420 to 1431: score 3.2, E = 6.9
*->ItsSsvvnsSTP<-*
+ sSs++n S P
gi|1194866 1420 VESSSILNNSNP 1431
DZF: domain 1 of 1, from 1422 to 1439: score -0.5, E = 9.8
*->hkaImNnpsrqalglgeA<-*
+++I Nn+++ +l++++A
gi|1194866 1422 SSSILNNSNPIPLPVSTA 1439
Autotransporter: domain 1 of 1, from 1486 to 1514: score 2.5, E = 2.6
CS EEEECTTEEEEEEEEEE.... TTEEEEE
*->Glelklgsnlslflnysaefg.sqlsdng<-*
+l+++ gs++s+++++s+++ ++++++++
gi|1194866 1486 NLTFQPGSGFSGNASFSYTVTdDDGANSN 1514
PKD: domain 4 of 4, from 1504 to 1520: score 5.7, E = 0.32
CS EEEETTCEEEEEEEEEEE
*->tvsngvgsasattttvtV<-*
tv+++ g++s +++tV
gi|1194866 1504 TVTDDDGANSNI-ANITV 1520
CRPV_capsid: domain 1 of 1, from 1587 to 1601: score -0.2, E = 9.6
*->tpNaslGlisGEkvtSL<-*
pN l li GE vt+L
gi|1194866 1587 -PNGTL-LINGEEVTNL 1601
V-set_CD47: domain 1 of 1, from 1593 to 1612: score 0.6, E = 9.7
*->iegkttIeLkyrvvsWFnseEn<-*
i g++++ L + v+++++e+
gi|1194866 1593 INGEEVTNLDQ--VQQLTPEQA 1612
Phage_Capsid_P3: domain 2 of 2, from 1603 to 1611: score 0.8, E = 2.1
CS ----------
*->AqvqqLtPAq<-*
qvqqLtP q
gi|1194866 1603 -QVQQLTPEQ 1611
Tir_receptor_N: domain 1 of 1, from 1611 to 1626: score 0.1, E = 7.6
*->qAlALtPEPDdPtttD<-*
qA Lt EPD t D
gi|1194866 1611 QAGQLTFEPDPNLTSD 1626
MucBP: domain 2 of 2, from 1630 to 1640: score 0.1, E = 27
*->tYtfngtiqtV<-*
tYt++++ tV
gi|1194866 1630 TYTATDNEGTV 1640
HemolysinCabind: domain 1 of 15, from 1707 to 1724: score 4.6, E = 3.3
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G G D + +G+D +
gi|1194866 1707 SGSLGSDMVFAFGGDDHI 1724
HemolysinCabind: domain 2 of 15, from 1725 to 1741: score 9.8, E = 0.087
CS E--SSS-EEEEESSCGE
*->yGGaGnDtLyGgaGnDt<-*
+G Dt +Gg+GnD+
gi|1194866 1725 EASEGPDTVFGGDGNDL 1741
HemolysinCabind: domain 3 of 15, from 1743 to 1760: score 19.7, E = 8.1e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +GnD+L G+ G Dtl
gi|1194866 1743 FGEEGNDSLLGDRGSDTL 1760
HemolysinCabind: domain 4 of 15, from 1782 to 1797: score 9.0, E = 0.14
CS E--SSS-EEEEESSCG
*->yGGaGnDtLyGgaGnD<-*
yG a nD + Gg G+D
gi|1194866 1782 YGHASNDLMQGGPGAD 1797
HemolysinCabind: domain 5 of 15, from 1800 to 1815: score 0.6, E = 53
CS E--SSS-EEEEESSCG
*->yGGaGnDtLyGgaGnD<-*
y G+ +D yGg+ +D
gi|1194866 1800 YSGKQDDFAYGGQNDD 1815
HemolysinCabind: domain 6 of 15, from 1818 to 1835: score 21.9, E = 1.8e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ G DtLyG++GnDt
gi|1194866 1818 WGDLGSDTLYGDQGNDTM 1835
HemolysinCabind: domain 7 of 15, from 1859 to 1876: score 19.8, E = 8e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaG+D ++Gg nDtl
gi|1194866 1859 WGGAGDDLMNGGRSNDTL 1876
HemolysinCabind: domain 8 of 15, from 1877 to 1894: score 13.6, E = 0.0059
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG GnDt +Gg+ +D+
gi|1194866 1877 SGGVGNDTVRGGKEDDLV 1894
RE_AccI: domain 1 of 1, from 1885 to 1911: score 1.7, E = 1.6
*->vKYGKsDnLvAGEdGFDaFYqDFqtEL<-*
v+ GK D Lv GE G D Y D ++L
gi|1194866 1885 VRGGKEDDLVYGEAGDDLMYGDLGNDL 1911
HemolysinCabind: domain 9 of 15, from 1895 to 1912: score 20.7, E = 4.2e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yG aG+D +yG+ GnD+l
gi|1194866 1895 YGEAGDDLMYGDLGNDLL 1912
HemolysinCabind: domain 10 of 15, from 1914 to 1924: score 6.2, E = 1.1
CS --SSS-EEEEE
*->GGaGnDtLyGg<-*
G++GnDt+yG+
gi|1194866 1914 GNEGNDTIYGD 1924
Herpes_gE: domain 1 of 1, from 1929 to 1950: score 1.5, E = 1
*->stfqrldvdgpssggSGytvWf<-*
+t+ l+++++ +ggSG +++f
gi|1194866 1929 ETISTLPGRDTLCGGSGNDILF 1950
HemolysinCabind: domain 11 of 15, from 1936 to 1949: score 12.8, E = 0.01
CS SS-EEEEESSCGEE
*->GnDtLyGgaGnDtl<-*
G+DtL Gg+GnD+l
gi|1194866 1936 GRDTLCGGSGNDIL 1949
Prion: domain 1 of 1, from 1943 to 1957: score 2.1, E = 4
CS SSS-S---SSHHHHH
*->MskldihFGneeEnR<-*
+s+ di FGne+ +R
gi|1194866 1943 GSGNDILFGNEDQDR 1957
DUF1769: domain 1 of 1, from 1945 to 1953: score 5.0, E = 1.2
*->GddllFGND<-*
G+d+lFGN+
gi|1194866 1945 GNDILFGNE 1953
HemolysinCabind: domain 12 of 15, from 1950 to 1967: score 9.2, E = 0.12
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++ D+L Gg+ Dtl
gi|1194866 1950 FGNEDQDRLCGGEDSDTL 1967
HemolysinCabind: domain 13 of 15, from 1968 to 1985: score 15.1, E = 0.0021
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yGG+ DtL G +G+D+l
gi|1194866 1968 YGGDSEDTLAGEQGDDWL 1985
HemolysinCabind: domain 14 of 15, from 1986 to 2003: score 17.9, E = 0.00029
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++GnD ++Gg+G D++
gi|1194866 1986 FGDQGNDLISGGSGIDRF 2003
HemolysinCabind: domain 15 of 15, from 2004 to 2014: score 0.8, E = 45
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+ g+G Dt+
gi|1194866 2004 ILFSGSGTDTI 2014
Adeno_shaft: domain 1 of 1, from 2025 to 2033: score 3.4, E = 9.2
CS -B-TTEEEE
*->klGagLtvd<-*
+lG+gLt+d
gi|1194866 2025 ALGGGLTFD 2033
TEP1_N: domain 1 of 1, from 2032 to 2061: score 8.8, E = 0.12
*->lEklhghvsvhpDiLsLenrCLalLpdlkp<-*
+ l s + iLsL+ + La+L d++
gi|1194866 2032 FDALTLSQSGTSTILSLDTQQLAILNDIQV 2061
//