hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 119489374.fa
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Query sequence: gi|119489374|ref|ZP_01622154.1|
Accession: [none]
Description: hypothetical protein L8106_02422 [Lyngbya sp. PCC 8106]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 107.1 2.6e-31 7
Calx-beta Calx-beta domain 65.0 6.2e-17 6
PD40 WD40-like Beta Propeller Repeat 17.4 8.7e-05 4
SBBP Beta-propeller repeat 9.0 0.11 1
DUF2588 Protein of unknown function (DUF2588) 7.3 0.17 1
PMBR Pseudomurein-binding repeat 9.2 0.19 3
NikM Nickel uptake substrate-specific tran 4.6 0.4 1
TSP_3 Thrombospondin type 3 repeat 7.6 0.44 3
Neocarzinostat Neocarzinostatin family 4.5 0.49 1
DUF2359 Uncharacterised conserved protein (DU 1.7 0.59 1
CutA1 CutA1 divalent ion tolerance protein 5.2 0.61 1
DUF1735 Domain of unknown function (DUF1735) 6.1 0.64 2
Baculo_E56 Baculoviral E56 protein, specific to 3.7 0.65 1
PKD PKD domain 4.4 0.81 1
Cas_GSU0053 CRISPR-associated protein GSU0053 (Ca 4.5 0.89 1
YopE_N YopE, N terminal 2.8 1.2 1
SSV1_ORF_D-335 ORF D-335-like protein 3.5 1.5 1
ETF Electron transfer flavoprotein domain 3.5 1.9 1
Big_1 Bacterial Ig-like domain (group 1) 2.6 2 1
DUF1491 Protein of unknown function (DUF1491) 2.9 2.3 1
GMP_synt_C GMP synthase C terminal domain 0.0 2.3 1
HAS-barrel HAS barrel domain 3.8 2.3 2
Endostatin Collagenase NC10 and Endostatin 1.2 2.6 1
Haemagg_act haemagglutination activity domain 2.8 2.6 1
Arteri_nucleo Arterivirus nucleocapsid protein 2.7 3.1 1
DUF111 Protein of unknown function DUF111 0.0 3.2 1
Endonuc-FokI_C Restriction endonuclease FokI, C term 1.0 3.2 1
DUF419 Protein of unknown function (DUF419) 2.7 3.2 1
Dioxygenase_C Dioxygenase 2.4 3.3 1
DUF225 Domain of unknown function (DUF225) 2.8 3.7 2
NMT1 NMT1/THI5 like 1.1 3.7 1
TruB_C tRNA Pseudouridine synthase II, C ter 3.1 4.1 2
Flagellin_IN Flagellin hook IN motif 3.4 4.1 2
TFIIB_Zn_Ribbon TFIIB zinc-binding 3.4 4.2 1
Cbb3_Q_epsi Cytochrome c oxidase cbb3-type (Cbb3_ 3.3 4.4 1
DUF1724 Domain of unknown function (DUF1724) 2.3 4.5 1
Chlorovi_GP_rpt Chlorovirus glycoprotein repeat 3.2 4.6 2
DUF1769 Protein of unknown function (DUF1769) 2.9 4.7 2
PilS PilS N terminal 1.5 4.8 1
DBP10CT DBP10CT (NUC160) domain 2.5 4.9 1
HlyD HlyD family secretion protein 1.7 5 1
DUF1521 Domain of Unknown Function (DUF1521) 0.3 5 1
DUF1157 Protein of unknown function (DUF1157) 0.3 5.1 1
Gemini_mov Geminivirus putative movement protein 1.5 5.2 1
CDC48_2 Cell division protein 48 (CDC48), dom 2.3 5.5 1
BSP Plant Basic Secretory Protein -0.1 5.7 1
Aldo_ket_red Aldo/keto reductase family 0.6 5.7 1
NIDO Nidogen-like 1.7 6 2
PPC Bacterial pre-peptidase C-terminal do 2.3 6 1
CortBP2 Cortactin-binding protein-2 -0.4 6 1
Vg_Tdu Vestigial/Tondu family 2.4 6.2 1
DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-te -0.2 6.2 1
Crinivirus_P26 Crinivirus P26 protein -0.6 6.3 1
Glyco_transf_8 Glycosyl transferase family 8 0.2 6.4 1
Peptidase_M26_C M26 IgA1-specific Metallo-endopeptida -1.5 6.4 1
Collagen_bind Collagen binding domain 1.9 6.5 1
FTZ Fushi tarazu (FTZ), N-terminal region -0.3 6.5 1
DUF1522 Domain of Unknown Function (DUF1522) 1.5 6.7 1
DUF1881 Protein of unkown function (DUF1881) 0.8 6.7 1
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogen -1.1 7.2 1
TOBE TOBE domain 2.7 7.3 1
Bundlin Bundlin 1.0 7.3 1
BDM Putative biofilm-dependent modulation 1.2 7.4 1
Pox_E8 Poxvirus E8 protein 0.6 7.4 1
TBP-binding TATA box-binding protein binding 2.4 7.5 1
Tecti-min-caps Tectiviridae, minor capsid 1.0 7.6 1
DUF2070 Predicted membrane protein (DUF2070) 1.1 7.7 1
Amelogenin Amelogenin -0.3 7.8 1
Bul1_N Bul1 N terminus -0.8 7.8 1
DAO FAD dependent oxidoreductase 0.1 8 1
NAGidase beta-N-acetylglucosaminidase -0.1 8 1
Pec_lyase_N Pectate lyase, N terminus -0.2 8.5 1
Tenui_N Tenuivirus nucleocapsid protein -0.5 8.5 1
Hep_Hag Hep_Hag 3.5 8.6 1
IL10 Interleukin 10 0.3 8.7 1
MpPF1 M penetrans paralogue family 1 -1.3 8.8 1
TnsA_N TnsA endonuclease N terminal 1.0 8.9 1
Pentapeptide Pentapeptide repeats (8 copies) 2.7 9 1
ORMDL ORMDL family 0.9 9.2 1
Cnl2_NKP2 Cnl2/NKP2 family protein 2.0 9.2 1
DUF851 Caenorhabditis elegans repeat of unkn 2.4 9.4 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PD40 1/4 222 251 .. 14 41 .] 3.7 2.1
DUF1881 1/1 238 258 .. 143 164 .. 0.8 6.7
DUF1521 1/1 247 262 .. 28 43 .. 0.3 5
PD40 2/4 270 298 .. 1 26 [. 1.3 12
TruB_C 1/2 285 294 .. 34 43 .. 1.6 12
PD40 3/4 329 375 .. 1 41 [] 12.3 0.0037
TruB_C 2/2 344 353 .. 34 43 .. 1.5 12
Gp_dh_N 1/1 394 402 .. 1 9 [. -1.1 7.2
ORMDL 1/1 394 401 .. 137 145 .] 0.9 9.2
PD40 4/4 409 426 .. 9 26 .. 0.2 26
DPPIV_N 1/1 415 428 .. 1 14 [. -0.2 6.2
TSP_3 1/3 446 458 .. 1 15 [] 0.9 46
DUF1724 1/1 448 462 .. 29 42 .. 2.3 4.5
DUF111 1/1 476 484 .. 1 9 [. 0.0 3.2
TSP_3 2/3 572 584 .. 1 15 [] 3.7 6.7
Hep_Hag 1/1 601 616 .. 1 16 [. 3.5 8.6
NIDO 1/2 601 614 .. 1 16 [. 0.1 16
IL10 1/1 634 646 .. 158 170 .] 0.3 8.7
Bundlin 1/1 673 700 .. 71 97 .] 1.0 7.3
DUF1735 1/2 705 747 .. 30 65 .] 5.8 0.8
Pec_lyase_N 1/1 726 732 .. 1 7 [. -0.2 8.5
SSV1_ORF_D-335 1/1 765 808 .. 29 73 .] 3.5 1.5
Amelogenin 1/1 794 816 .. 151 172 .. -0.3 7.8
Baculo_E56 1/1 847 869 .. 1 24 [. 3.7 0.65
Haemagg_act 1/1 848 864 .. 123 139 .] 2.8 2.6
SBBP 1/1 871 896 .. 1 27 [. 9.0 0.11
HemolysinCabind 1/7 875 886 .. 1 12 [. 0.9 41
Bul1_N 1/1 889 896 .. 510 517 .] -0.8 7.8
DUF1522 1/1 953 960 .. 111 118 .] 1.5 6.7
Tecti-min-caps 1/1 1020 1029 .. 75 84 .] 1.0 7.6
Chlorovi_GP_rpt 1/2 1041 1050 .. 25 35 .] 1.6 15
DUF851 1/1 1070 1076 .. 1 7 [. 2.4 9.4
Crinivirus_P26 1/1 1078 1086 .. 219 227 .] -0.6 6.3
TSP_3 3/3 1086 1100 .. 1 15 [] 3.1 10
Endostatin 1/1 1100 1115 .. 1 16 [. 1.2 2.6
DUF1491 1/1 1152 1162 .. 101 111 .] 2.9 2.3
Collagen_bind 1/1 1164 1202 .. 102 152 .] 1.9 6.5
Arteri_nucleo 1/1 1168 1191 .. 99 122 .] 2.7 3.1
PKD 1/1 1184 1205 .. 71 92 .] 4.4 0.81
DBP10CT 1/1 1212 1225 .. 1 14 [. 2.5 4.9
Flagellin_IN 1/2 1280 1300 .. 42 63 .] 2.9 5.9
Tenui_N 1/1 1299 1312 .. 1 14 [. -0.5 8.5
Cas_GSU0053 1/1 1352 1365 .. 1 14 [. 4.5 0.89
MpPF1 1/1 1355 1375 .. 388 408 .. -1.3 8.8
DUF1735 2/2 1409 1455 .. 26 65 .] 0.3 27
Calx-beta 1/6 1416 1447 .. 77 109 .] 2.7 5
ETF 1/1 1428 1438 .. 164 174 .] 3.5 1.9
Pentapeptide 1/1 1506 1519 .. 27 40 .] 2.7 9
PilS 1/1 1519 1527 .. 153 161 .] 1.5 4.8
DUF1157 1/1 1565 1592 .. 370 398 .] 0.3 5.1
HAS-barrel 1/2 1671 1710 .. 70 110 .] 2.4 5.9
Dioxygenase_C 1/1 1708 1722 .. 192 206 .] 2.4 3.3
PMBR 1/3 1744 1761 .. 16 33 .] 3.9 5.9
DUF225 1/2 1750 1762 .. 67 81 .. 1.3 9.6
HAS-barrel 2/2 1759 1827 .. 40 110 .] 1.4 11
NAGidase 1/1 1863 1894 .. 309 340 .] -0.1 8
TFIIB_Zn_Ribbon 1/1 1876 1890 .. 30 44 .] 3.4 4.2
Peptidase_M26_C 1/1 1958 1991 .. 1 34 [. -1.5 6.4
Big_1 1/1 2177 2193 .. 45 61 .. 2.6 2
Endonuc-FokI_C 1/1 2208 2226 .. 179 197 .] 1.0 3.2
DAO 1/1 2250 2273 .. 376 399 .] 0.1 8
Neocarzinostat 1/1 2259 2268 .. 1 10 [. 4.5 0.49
NikM 1/1 2273 2292 .. 185 204 .. 4.6 0.4
NIDO 2/2 2276 2283 .. 1 8 [. 1.5 6.6
FTZ 1/1 2332 2362 .. 280 311 .] -0.3 6.5
TnsA_N 1/1 2337 2344 .. 101 108 .] 1.0 8.9
NMT1 1/1 2351 2391 .. 113 158 .. 1.1 3.7
Pox_E8 1/1 2355 2364 .. 236 245 .] 0.6 7.4
Calx-beta 2/6 2361 2459 .. 1 109 [] 3.6 2.8
Chlorovi_GP_rpt 2/2 2394 2400 .. 28 35 .] 1.6 15
HlyD 1/1 2433 2507 .. 240 321 .] 1.7 5
BSP 1/1 2469 2489 .. 1 24 [. -0.1 5.7
Calx-beta 3/6 2472 2576 .. 1 109 [] 47.5 3.5e-12
GMP_synt_C 1/1 2482 2487 .. 197 202 .] 0.0 2.3
Flagellin_IN 2/2 2504 2527 .. 1 26 [. 0.6 27
Vg_Tdu 1/1 2568 2579 .. 22 33 .] 2.4 6.2
Calx-beta 4/6 2590 2614 .. 1 28 [. 7.9 0.19
DUF419 1/1 2616 2623 .. 115 122 .] 2.7 3.2
CutA1 1/1 2620 2630 .. 1 11 [. 5.2 0.61
Cbb3_Q_epsi 1/1 2666 2677 .. 46 57 .] 3.3 4.4
TBP-binding 1/1 2677 2689 .. 54 66 .] 2.4 7.5
Calx-beta 5/6 2699 2739 .. 1 45 [. 2.9 4.4
Aldo_ket_red 1/1 2744 2760 .. 338 354 .] 0.6 5.7
YopE_N 1/1 2750 2757 .. 119 126 .] 2.8 1.2
Cnl2_NKP2 1/1 2800 2823 .. 47 72 .] 2.0 9.2
Calx-beta 6/6 2808 2816 .. 1 9 [. 0.3 23
DUF2070 1/1 2891 2904 .. 178 191 .] 1.1 7.7
Glyco_transf_8 1/1 2902 2911 .. 1 10 [. 0.2 6.4
DUF2588 1/1 2907 2934 .. 81 111 .. 7.3 0.17
TOBE 1/1 2940 2976 .. 12 48 .. 2.7 7.3
CDC48_2 1/1 2964 2982 .. 68 88 .] 2.3 5.5
PMBR 2/3 2987 3000 .. 20 33 .] 2.6 13
DUF225 2/2 2990 3003 .. 68 83 .. 1.5 8.4
BDM 1/1 3000 3028 .. 65 92 .] 1.2 7.4
PPC 1/1 3078 3099 .. 1 20 [. 2.3 6
PMBR 3/3 3108 3126 .. 15 33 .] 2.7 12
DUF2359 1/1 3109 3135 .. 443 469 .] 1.7 0.59
CortBP2 1/1 3114 3137 .. 617 639 .] -0.4 6
HemolysinCabind 2/7 3193 3210 .. 1 18 [] 18.7 0.00017
DUF1769 1/2 3198 3205 .. 1 9 [. 1.4 13
HemolysinCabind 3/7 3211 3228 .. 1 18 [] 9.9 0.076
Gemini_mov 1/1 3218 3234 .. 82 101 .] 1.5 5.2
HemolysinCabind 4/7 3229 3246 .. 1 18 [] 20.2 6e-05
DUF1769 2/2 3233 3239 .. 1 7 [. 1.5 12
HemolysinCabind 5/7 3247 3264 .. 1 18 [] 21.8 2e-05
HemolysinCabind 6/7 3265 3282 .. 1 18 [] 19.0 0.00013
HemolysinCabind 7/7 3283 3300 .. 1 18 [] 16.6 0.00075
Alignments of top-scoring domains:
PD40: domain 1 of 4, from 222 to 251: score 3.7, E = 2.1
*->wSPDGktivFssnrgdgddgsGsfd.......iyv<-*
+S++G+ i+F sn + + ++d++++ ++i+v
gi|1194893 222 ISNNGQLIAFESNAN-----NLVPDdnndvsdIFV 251
DUF1881: domain 1 of 1, from 238 to 258: score 0.8, E = 6.7
*->lmPpDgeiVtTaiavRdtrtGv<-*
l P D +V ++i vRd tG+
gi|1194893 238 LVPDDNNDV-SDIFVRDRQTGI 258
DUF1521: domain 1 of 1, from 247 to 262: score 0.3, E = 5
*->ssmlirnkktGetTkv<-*
s + +r+ +tG tT+v
gi|1194893 247 SDIFVRDRQTGITTRV 262
PD40: domain 2 of 4, from 270 to 298: score 1.3, E = 12
*->grltntsg...eggPtwSPDGktivFssn<-*
+ ++++ +++ P+++PDG+ +F s+
gi|1194893 270 EGNDKSGAfsdSILPAITPDGRFVAFESK 298
TruB_C: domain 1 of 2, from 285 to 294: score 1.6, E = 12
CS EE-TTS-EEE
*->AfaPdGrviA<-*
A++PdGr++A
gi|1194893 285 AITPDGRFVA 294
PD40: domain 3 of 4, from 329 to 375: score 12.3, E = 0.0037
*->grltntsg...eggPtwSPDGktivFssnrgdgddgsGsfd......
+ + sg++ +++P+++PDG+ i+F s+ + + +++++++++
gi|1194893 329 IDNNGISGddaSRNPVITPDGRFIAFESRAE-----NLVPRdnnset 370
..iyv<-*
+i+v
gi|1194893 371 wdIFV 375
TruB_C: domain 2 of 2, from 344 to 353: score 1.5, E = 12
CS EE-TTS-EEE
*->AfaPdGrviA<-*
+++PdGr+iA
gi|1194893 344 VITPDGRFIA 353
Gp_dh_N: domain 1 of 1, from 394 to 402: score -1.1, E = 7.2
CS EEEEEE-SC
*->ikVgINGFG<-*
+++ ING G
gi|1194893 394 VRISINGMG 402
ORMDL: domain 1 of 1, from 394 to 401: score 0.9, E = 9.2
*->vRIFGInky<-*
vRI+ In+
gi|1194893 394 VRIS-INGM 401
PD40: domain 4 of 4, from 409 to 426: score 0.2, E = 26
*->eggPtwSPDGktivFssn<-*
+++P++S+DG+ F s+
gi|1194893 409 SFDPSISNDGRFVLFESD 426
DPPIV_N: domain 1 of 1, from 415 to 428: score -0.2, E = 6.2
CS -TTSSEEEEEESSS
*->SpDgkylLlatnye<-*
S Dg+++L++++++
gi|1194893 415 SNDGRFVLFESDAN 428
TSP_3: domain 1 of 3, from 446 to 458: score 0.9, E = 46
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D D++g+ D+ +
gi|1194893 446 RDPDGNGIF--DQGN 458
DUF1724: domain 1 of 1, from 448 to 462: score 2.3, E = 4.5
*->FdknGryDh.qdliS<-*
+d nG++D+++++iS
gi|1194893 448 PDGNGIFDQgNSIIS 462
DUF111: domain 1 of 1, from 476 to 484: score 0.0, E = 3.2
*->avfDpqfaG<-*
a fDpqf+G
gi|1194893 476 ASFDPQFSG 484
TSP_3: domain 2 of 3, from 572 to 584: score 3.7, E = 6.7
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+D D+Dgv D+ +
gi|1194893 572 RDPDQDGVF--DQGN 584
Hep_Hag: domain 1 of 1, from 601 to 616: score 3.5, E = 8.6
CS ECSTT-EEESTT-EE-
*->AtganStAiGsnakAs<-*
A++++S+++G+++ +s
gi|1194893 601 ANSFQSVVSGDGSLVS 616
NIDO: domain 1 of 2, from 601 to 614: score 0.1, E = 16
*->fNTFQavLatdkdgsa<-*
+N+FQ v++ d gs+
gi|1194893 601 ANSFQSVVSGD--GSL 614
IL10: domain 1 of 1, from 634 to 646: score 0.3, E = 8.7
CS HHHHHHHHHHHHT
*->DiFinyiEaYmti<-*
D+Fi iE +ti
gi|1194893 634 DVFISTIEPAITI 646
Bundlin: domain 1 of 1, from 673 to 700: score 1.0, E = 7.3
*->tGLnsniLLntsAi.PDnyKdakrtklt<-*
+GL n + Ai+PD y+ a+ + +t
gi|1194893 673 EGLTVNFSIAGDAInPDDYRFAAGNNIT 700
DUF1735: domain 1 of 2, from 705 to 747: score 5.8, E = 0.8
*->stvtIkAGenssdpsvlpikykt..........eegleldknYvLP<
+++tI +G+++++ l++ +++ ++++++ e +l++++nY+L
gi|1194893 705 NSLTIAPGATTAT---LDVIPVFdnisetdetiEVSLQPGTNYALT 747
-*
gi|1194893 - -
Pec_lyase_N: domain 1 of 1, from 726 to 732: score -0.2, E = 8.5
*->nIaefDE<-*
nI+e+DE
gi|1194893 726 NISETDE 732
SSV1_ORF_D-335: domain 1 of 1, from 765 to 808: score 3.5, E = 1.5
*->kvretYvGpLddVVetYlklKegrgGvwltp.nagrg..GlePgtpg
+ ++t vG+L +V++ + + G+ + +++++G++P t
gi|1194893 765 NTNDTGVGSLRQVINLANQV----EGTDIITfEIPPEdpGFNPNTGT 807
s<-*
gi|1194893 808 F 808
Amelogenin: domain 1 of 1, from 794 to 816: score -0.3, E = 7.8
*->lkPqqPgq.plpPiFPlQPLpPl<-*
++P++Pg +p+ +F++QPL+Pl
gi|1194893 794 IPPEDPGFnPNTGTFSIQPLSPL 816
Baculo_E56: domain 1 of 1, from 847 to 869: score 3.7, E = 0.65
*->nnPstrsi.gNNrvvPGYnlsNNqF<-*
nn s+++i++ N+ v+G+++ N+F
gi|1194893 847 NNTSGLTItAGNSTVKGFVI--NRF 869
Haemagg_act: domain 1 of 1, from 848 to 864: score 2.8, E = 2.6
CS SEEEEEEE-SEEEEETT
*->NvgglfvtTgaisikff<-*
N+ gl+ t+g++++k f
gi|1194893 848 NTSGLTITAGNSTVKGF 864
SBBP: domain 1 of 1, from 871 to 896: score 9.0, E = 0.11
*->qWstqlGPgpgasifgngIavDsnGNi<-*
+ ++++ +++++i+gn I++D++GNi
gi|1194893 871 EGIRLIT-AGNNTIQGNYIGTDISGNI 896
HemolysinCabind: domain 1 of 7, from 875 to 886: score 0.9, E = 41
CS E--SSS-EEEEE
*->yGGaGnDtLyGg<-*
+aGn+t+ G+
gi|1194893 875 LITAGNNTIQGN 886
Bul1_N: domain 1 of 1, from 889 to 896: score -0.8, E = 7.8
*->gtDlSGti<-*
gtD+SG+i
gi|1194893 889 GTDISGNI 896
DUF1522: domain 1 of 1, from 953 to 960: score 1.5, E = 6.7
*->sItGtgdl<-*
+I+Gt+dl
gi|1194893 953 NISGTADL 960
Tecti-min-caps: domain 1 of 1, from 1020 to 1029: score 1.0, E = 7.6
*->nqPLintqEG<-*
n PL ntq G
gi|1194893 1020 NTPLGNTQNG 1029
Chlorovi_GP_rpt: domain 1 of 2, from 1041 to 1050: score 1.6, E = 15
*->iGNVvAtyGNV<-*
iG Vv++ GN+
gi|1194893 1041 IGGVVGS-GNI 1050
DUF851: domain 1 of 1, from 1070 to 1076: score 2.4, E = 9.4
*->msnsiFD<-*
+snsiFD
gi|1194893 1070 LSNSIFD 1076
Crinivirus_P26: domain 1 of 1, from 1078 to 1086: score -0.6, E = 6.3
*->GLsLnDiKi<-*
GLsL Di i
gi|1194893 1078 GLSLADIGI 1086
TSP_3: domain 3 of 3, from 1086 to 1100: score 3.1, E = 10
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
D +nDg+ +nD d
gi|1194893 1086 IDLNNDGISENDFGD 1100
Endostatin: domain 1 of 1, from 1100 to 1115: score 1.2, E = 2.6
CS XXXXXXXXXXXXXXXX
*->gsgtGvtvfqnvdeml<-*
+ tG+++fqn+ ++l
gi|1194893 1100 DGDTGANTFQNYPDLL 1115
DUF1491: domain 1 of 1, from 1152 to 1162: score 2.9, E = 2.3
*->drdgrhfLdep<-*
dr+gr+fL e+
gi|1194893 1152 DRQGRTFLGET 1162
Collagen_bind: domain 1 of 1, from 1164 to 1202: score 1.9, E = 6.5
CS HHTTEEEEEEEEEEES-TT--......EEEEEEEEEE-BTTS--EEE
*->ktidnavkIsYtTtITdggkkqnesevsykNtAKIwyqtLngdnidg
+t+++++ +s++T++ ++ + s++ tA t + n+++
gi|1194893 1164 ATSNIPFTVSFNTELAEN-QR------SITATA-----TDANNNTSE 1198
CS EE--
venn<-*
+++
gi|1194893 1199 FSAP 1202
Arteri_nucleo: domain 1 of 1, from 1168 to 1191: score 2.7, E = 3.1
*->itytVsFmLPtkhtvRliratAgp<-*
i +tVsF + +R i atA+
gi|1194893 1168 IPFTVSFNTELAENQRSITATATD 1191
PKD: domain 1 of 1, from 1184 to 1205: score 4.4, E = 0.81
CS EEEEEEEETTCEEEEEEEEEEE
*->tVtLtvsngvgsasattttvtV<-*
++t t++++++++s ++++t
gi|1194893 1184 SITATATDANNNTSEFSAPITA 1205
DBP10CT: domain 1 of 1, from 1212 to 1225: score 2.5, E = 4.9
*->DLinDesigmfGqq<-*
DL+ D+s+g+ G++
gi|1194893 1212 DLDEDDSSGITGNN 1225
Flagellin_IN: domain 1 of 2, from 1280 to 1300: score 2.9, E = 5.9
*->tGVsAsvdadtnggrLvltstt<-*
tG++A++ ++t+ g+L+l+ ++
gi|1194893 1280 TGITATAYNSTT-GELQLRGEA 1300
Tenui_N: domain 1 of 1, from 1299 to 1312: score -0.5, E = 8.5
*->panladlqkaindI<-*
a++ad q+ai+ +
gi|1194893 1299 EASIADYQTAISQV 1312
Cas_GSU0053: domain 1 of 1, from 1352 to 1365: score 4.5, E = 0.89
*->salvieAdLkPVeG<-*
+ ++i A+L PVeG
gi|1194893 1352 VQVSIAANLSPVEG 1365
MpPF1: domain 1 of 1, from 1355 to 1375: score -1.3, E = 8.8
*->inaksntsttgsnktYTITLt<-*
++a + ++++g+ +t+TITL+
gi|1194893 1355 SIAANLSPVEGEIGTFTITLD 1375
DUF1735: domain 2 of 2, from 1409 to 1455: score 0.3, E = 27
*->tlpnstvtIkAGenssdpsvlpikykt.......eegleldknYvLP
t++++t tI +G+++++ v+++ ++ +++++ e+ l ++nY++
gi|1194893 1409 TVTPNTFTIEPGVTTASLNVVTVDDNIfdpeetvELTLIAGSNYLIT 1455
<-*
gi|1194893 - -
Calx-beta: domain 1 of 6, from 1416 to 1447: score 2.7, E = 5
*->tFgPgedtekcinvtiiDDdvyEgdEnFfvrLs<-*
t +Pg+ t nv +DD+++ + E+ + L
gi|1194893 1416 TIEPGV-TTASLNVVTVDDNIFDPEETVELTLI 1447
ETF: domain 1 of 1, from 1428 to 1438: score 3.5, E = 1.9
CS EEEETTTSS--
*->vlTVrpgafep<-*
v+TV+ ++f+p
gi|1194893 1428 VVTVDDNIFDP 1438
Pentapeptide: domain 1 of 1, from 1506 to 1519: score 2.7, E = 9
CS B-TT-B-TT-B-TC
*->nLsgAnLsganLsg<-*
nL+++nL nLs+
gi|1194893 1506 NLENTNLDEGNLSD 1519
PilS: domain 1 of 1, from 1519 to 1527: score 1.5, E = 4.8
*->tNTltfTsn<-*
+NT+tfTs
gi|1194893 1519 DNTITFTSE 1527
DUF1157: domain 1 of 1, from 1565 to 1592: score 0.3, E = 5.1
*->nNFEnkniyLiddekvsyskekLedIlnk<-*
nNFE +ni+Li+ ++ ++L+ l+
gi|1194893 1565 NNFELENITLINQDN-DVLGILLTPPLEP 1592
HAS-barrel: domain 1 of 2, from 1671 to 1710: score 2.4, E = 5.9
*->selsndlnlvlslkeieesngdiegvvateptvkvlGkvkr<-*
se n++n++l++ + + +d +g+v+t p +++++ ++
gi|1194893 1671 SEDINYNNFQLEDITLTNQDNDEVGIVVTPPI-ELITTEDG 1710
Dioxygenase_C: domain 1 of 1, from 1708 to 1722: score 2.4, E = 3.3
CS CBEEEEEEEEEE-BE
*->etfkevtfDfvLdpl<-*
e+ + v+fDfvL+++
gi|1194893 1708 EDGDSVDFDFVLSSQ 1722
PMBR: domain 1 of 3, from 1744 to 1761: score 3.9, E = 5.9
*->rvlnFiesngRlPnyVsi<-*
++l+F+ +n+ P +V++
gi|1194893 1744 EALSFTAENWNIPQTVTV 1761
DUF225: domain 1 of 2, from 1750 to 1762: score 1.3, E = 9.6
*->aENqdvPlPQTVTIn<-*
aEN + PQTVT++
gi|1194893 1750 AENWN--IPQTVTVT 1762
HAS-barrel: domain 2 of 2, from 1759 to 1827: score 1.4, E = 11
*->VeielddtgskvlGmvlnvernalvGnpllselsndlnlvlslkeie
V +++ d +s v G v+ + + + +s+ n++ ++l++ +
gi|1194893 1759 VTVTGVD-DSVVDGDVEYIVS-----STVSSQDANYNGFQLEDITLT 1799
esngdiegvvatept....vkvlGkvkr<-*
+ +d +g+ + p ++ + ++++ v +
gi|1194893 1800 NQDNDVVGITLIPPIepitTEEGDSVNF 1827
NAGidase: domain 1 of 1, from 1863 to 1894: score -0.1, E = 8
*->ksWlssiekieggkaeetvatlllnafakhny<-*
++W++s++ ++g +++ v ++ +++++ ++
gi|1194893 1863 ENWNNSQIVTVTGVDDDIVDGDVEYRINTTVV 1894
TFIIB_Zn_Ribbon: domain 1 of 1, from 1876 to 1890: score 3.4, E = 4.2
*->ieeniIDsgpEWraf<-*
++++i+D ++E+r +
gi|1194893 1876 VDDDIVDGDVEYRIN 1890
Peptidase_M26_C: domain 1 of 1, from 1958 to 1991: score -1.5, E = 6.4
*->skVaEYtitdtglvYTPnkvlkDytslvkkVlsd<-*
s+ E +i+ ++++TP+ + ++ +v+ V +d
gi|1194893 1958 SNPNEGSISISEVIFTPENWDVSQIVIVTGVDDD 1991
Big_1: domain 1 of 1, from 2177 to 2193: score 2.6, E = 2
CS EEEE.....EESSSEES
*->eVtFtvpsdvsssgtls<-*
eVtF++ s+++++gtls
gi|1194893 2177 EVTFNLASSNTTEGTLS 2193
Endonuc-FokI_C: domain 1 of 1, from 2208 to 2226: score 1.0, E = 3.2
CS TS--HHHHHTT-SSSB---
*->qklskkEVkkkildyeIsy<-*
q+ + V i d++I+y
gi|1194893 2208 QTVTITGVDDLIADGNINY 2226
DAO: domain 1 of 1, from 2250 to 2273: score 0.1, E = 8
CS EEEE--GGGHHHHHHHHHHHHHHH
*->yvatGhgghGltlapaiGkllAel<-*
+++t +G+t +p +G ++ e+
gi|1194893 2250 VINTDNETPGITVSPTTGLETSEA 2273
Neocarzinostat: domain 1 of 1, from 2259 to 2268: score 4.5, E = 0.49
CS EEEEES-SSB
*->avsVsPAsGL<-*
+++VsP +GL
gi|1194893 2259 GITVSPTTGL 2268
NikM: domain 1 of 1, from 2273 to 2292: score 4.6, E = 0.4
*->aGetftfqVLldGKPaagae<-*
aGet+tfqV+l+ +P+ +++
gi|1194893 2273 AGETATFQVVLNTQPVDNVT 2292
NIDO: domain 2 of 2, from 2276 to 2283: score 1.5, E = 6.6
*->fNTFQavL<-*
++TFQ+vL
gi|1194893 2276 TATFQVVL 2283
FTZ: domain 1 of 1, from 2332 to 2362: score -0.3, E = 6.5
*->nvsnEinHRivtAansgvaadFnWsHiE.EtlA<-*
nv Ei Ri+t a ++d n+ + +E +
gi|1194893 2332 NVDGEIEYRIITEAAI--SNDLNYNNLNpEDVT 2362
TnsA_N: domain 1 of 1, from 2337 to 2344: score 1.0, E = 8.9
CS --EEEE-G
*->idfrivTE<-*
i++ri+TE
gi|1194893 2337 IEYRIITE 2344
NMT1: domain 1 of 1, from 2351 to 2391: score 1.1, E = 3.7
*->lakaGgkgdpsdVtlVnvggtslspaLltGkvDaviGgyyNwegve<
l +++ +p+dVtl+n +l + ++ vD ++G N+ +++
gi|1194893 2351 LNYNNL--NPEDVTLINL-DNDL--PVVDLSVDLTTGEEANTTAIT 2391
-*
gi|1194893 - -
Pox_E8: domain 1 of 1, from 2355 to 2364: score 0.6, E = 7.4
*->nltkeDVtLl<-*
nl +eDVtL+
gi|1194893 2355 NLNPEDVTLI 2364
Calx-beta: domain 2 of 6, from 2361 to 2459: score 3.6, E = 2.8
*->atvtIlDdddagvvgFeptvyqVsVlEndGevevcVvrmggapelrr
+t + lD+ d +vv ++ + E+ + ++V++++ a ++
gi|1194893 2361 VTLINLDN-DLPVVDLSVDLTTG---EEANTTAITVTVTASA-NVEG 2402
tVtVsyrTeDGTAtaGPgsDYeptegtiLtFgPgedtekcinvtiiDDdv
+ tV++ G + +DY+ + + + +g+ ++ +++DD v
gi|1194893 2403 EQTVNLD-ISGIGITS--NDYTLSNPQ-MIIPDGN-NTATVTFQVLDDVV 2447
yEgdEnFfvrLs<-*
+EgdE+ ++ L
gi|1194893 2448 FEGDETATLTLL 2459
Chlorovi_GP_rpt: domain 2 of 2, from 2394 to 2400: score 1.6, E = 15
*->VvAtyGNV<-*
V+A+ +NV
gi|1194893 2394 VTAS-ANV 2400
HlyD: domain 1 of 1, from 2433 to 2507: score 1.7, E = 5
CS -CGGTS-TTEEEEEEEEEEEESS-..---S-----------------
*->girapltggvyvlvvlteGgvvaagqilmptvavsrllpveaqvavv
+ +a++t+ v ++ v++eG+ +a +l ++ + + ++v
gi|1194893 2433 NNTATVTFQVLDD-VVFEGDETA---TLTLLNPSEGIVLGTGSVNLT 2475
CS -----------------------------------
nidkvvqglpVeigldpGafnqsttplvpGevviv<-*
id+ ++ Ve ++ +++++ + +G +i+
gi|1194893 2476 IIDNDTP-ATVEFSQT--DYQINEDGTSVGSEIII 2507
BSP: domain 1 of 1, from 2469 to 2489: score -0.1, E = 5.7
*->apavtldisntaPsdtpGgrrFdr<-*
++v l+i++++ tp++ F++
gi|1194893 2469 TGSVNLTIIDND---TPATVEFSQ 2489
Calx-beta: domain 3 of 6, from 2472 to 2576: score 47.5, E = 3.5e-12
*->atvtIlDdddagvvgFeptvyqVsVlEndGev..evcVvrmggapel
++ tI+D+d + +v+F++t+yq+ +E+ +v++e+ + r+g+ ++
gi|1194893 2472 VNLTIIDNDTPATVEFSQTDYQI--NEDGTSVgsEIIINRTGD-TSQ 2515
rrtVtVsyrTeDGTAtaGPgsDYeptegtiLt...FgPgedtekcinvti
+tV V +++e TAtaG D+ + L++ +F +++ + ++n++i
gi|1194893 2516 ASTVEVQLTSE--TATAG--EDFDNFDNN-LIsvrFAANQ-KTATVNIPI 2559
iDDdvyEgdEnFfvrLs<-*
+D+ +E+dE+F++ L
gi|1194893 2560 FEDNLVEEDETFSLALV 2576
GMP_synt_C: domain 1 of 1, from 2482 to 2487: score 0.0, E = 2.3
CS TS-SS-
*->PaTIEW<-*
PaT+E+
gi|1194893 2482 PATVEF 2487
Flagellin_IN: domain 2 of 2, from 2504 to 2527: score 0.6, E = 27
*->tltinggggkensvadgvdislsagd<-*
++ in +g ++ a++v+++l++ +
gi|1194893 2504 EIIINRTGDTSQ--ASTVEVQLTSET 2527
Vg_Tdu: domain 1 of 1, from 2568 to 2579: score 2.4, E = 6.2
*->DEHFSRALrynk<-*
DE FS AL +++
gi|1194893 2568 DETFSLALVNPS 2579
Calx-beta: domain 4 of 6, from 2590 to 2614: score 7.9, E = 0.19
*->atvtIlDdddagvvgFeptvyqVsVlEn<-*
+tv+I+D+ +++ +++t+ +V +E+
gi|1194893 2590 TTVEIFDN-EIPRIDISQTELSV--TES 2614
DUF419: domain 1 of 1, from 2616 to 2623: score 2.7, E = 3.2
CS HHHHHHHH
*->veqSYdLv<-*
+++SY+Lv
gi|1194893 2616 ITDSYNLV 2623
CutA1: domain 1 of 1, from 2620 to 2630: score 5.2, E = 0.61
CS EEEEEEEESSH
*->sivVlvTaPde<-*
+++Vl+T+P+e
gi|1194893 2620 YNLVLTTVPSE 2630
Cbb3_Q_epsi: domain 1 of 1, from 2666 to 2677: score 3.3, E = 4.4
*->LdDellEarskk<-*
+dDel+E r +
gi|1194893 2666 IDDELVEDRTHN 2677
TBP-binding: domain 1 of 1, from 2677 to 2689: score 2.4, E = 7.5
*->gSLLtevldskDa<-*
+SL+t v+ s+D
gi|1194893 2677 NSLITHVVTSDDQ 2689
Calx-beta: domain 5 of 6, from 2699 to 2739: score 2.9, E = 4.4
*->atvtIlDdddagvvgFeptvyqVsVlEndGevevcVvrmggapel<-
++++I ++ d++ v++ p++ +V E+ ++ + v++++ pel
gi|1194893 2699 INIEIAEN-DVVDVSIAPRNLTV--SEDGETDTYSLVLTRE-PEL 2739
*
gi|1194893 - -
Aldo_ket_red: domain 1 of 1, from 2744 to 2760: score 0.6, E = 5.7
CS SSGGHHHHHHHHHTTHH
*->dfeLteedmkkideldr<-*
+feL e++++ id++ +
gi|1194893 2744 EFELNEQQLNSIDAISF 2760
YopE_N: domain 1 of 1, from 2750 to 2757: score 2.8, E = 1.2
CS XXXXXXXX
*->qqLssLDA<-*
qqL+s+DA
gi|1194893 2750 QQLNSIDA 2757
Cnl2_NKP2: domain 1 of 1, from 2800 to 2823: score 2.0, E = 9.2
*->YeeLqqQrerkvldkvaanIeqefdv<-*
Y++Lq++ + ++ + + +++e+++
gi|1194893 2800 YRDLQIRTAN--VEILDNDVDAEVII 2823
Calx-beta: domain 6 of 6, from 2808 to 2816: score 0.3, E = 23
*->atvtIlDdd<-*
a+v+IlD+d
gi|1194893 2808 ANVEILDND 2816
DUF2070: domain 1 of 1, from 2891 to 2904: score 1.1, E = 7.7
*->vlGedwfrilsstv<-*
+l+ ++++i+s+tv
gi|1194893 2891 ILQGNSTEIISHTV 2904
Glyco_transf_8: domain 1 of 1, from 2902 to 2911: score 0.2, E = 6.4
*->nivlalddnY<-*
++v+ +d+nY
gi|1194893 2902 HTVMSADRNY 2911
DUF2588: domain 1 of 1, from 2907 to 2934: score 7.3, E = 0.17
*->pdrdeldeLedAdPdfDvdinDddtAdveIt<-*
+dr+ d+Le d+ +di D+d+A+v+It
gi|1194893 2907 ADRNY-DGLE--ISDLNIDIADNDVAEVLIT 2934
TOBE: domain 1 of 1, from 2940 to 2976: score 2.7, E = 7.3
CS EEEEE-S SEEEEEEEETTS.EEEEEEEHE-HHHHHCT
*->tvveplG..veteVrvdlgggqtltAritrldrsaeeLg<-*
t+v + G + + +V + ++ ++++++it+ +s ++Lg
gi|1194893 2940 TEVSEDGltDTYQVVLNSQPTEDVVVTITP--DSQVDLG 2976
CDC48_2: domain 1 of 1, from 2964 to 2982: score 2.3, E = 5.5
CS SS.--B-STT--EE--TT-EE
*->pVvvtedTeieigILekpvee<-*
+V +t+d ++ +g e+ + e
gi|1194893 2964 VVTITPDSQVDLG--EGGENE 2982
PMBR: domain 2 of 3, from 2987 to 3000: score 2.6, E = 13
*->FiesngRlPnyVsi<-*
F+ +n+ +P +V++
gi|1194893 2987 FTSENWNEPQTVTV 3000
DUF225: domain 2 of 2, from 2990 to 3003: score 1.5, E = 8.4
*->ENqdvPlPQTVTInae<-*
EN + PQTVT++a+
gi|1194893 2990 ENWN--EPQTVTVEAV 3003
BDM: domain 1 of 1, from 3000 to 3028: score 1.2, E = 7.4
*->vEAs.DnDiLsDiYqqtinYvvsGqHPtL<-*
vEA +D D+ +Di tin vs
gi|1194893 3000 VEAVdDEDVEADIHTSTINHAVSSNDSNY 3028
PPC: domain 1 of 1, from 3078 to 3099: score 2.3, E = 6
CS -EEEEEEEES TTCE EEEEEE
*->dvdvysFtvp.aggt.lsisld<-*
++dvy+++++++++ +++i+++
gi|1194893 3078 GSDVYKIVLNsEPTAnVEININ 3099
PMBR: domain 3 of 3, from 3108 to 3126: score 2.7, E = 12
*->srvlnFiesngRlPnyVsi<-*
++ lnF+ sn++ P ++++
gi|1194893 3108 KQTLNFTPSNWKVPQTITV 3126
DUF2359: domain 1 of 1, from 3109 to 3135: score 1.7, E = 0.59
*->qvseishstWllLQdtTvtvadWaLal<-*
q ++++ s W Q +Tvt d L
gi|1194893 3109 QTLNFTPSNWKVPQTITVTAVDDNLTE 3135
CortBP2: domain 1 of 1, from 3114 to 3137: score -0.4, E = 6
*->lskpskveqgk.vvtvtEkLieeS<-*
++++ kv+q ++v+ v ++L e+S
gi|1194893 3114 TPSNWKVPQTItVTAVDDNLTEGS 3137
HemolysinCabind: domain 2 of 7, from 3193 to 3210: score 18.7, E = 0.00017
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G + +D+L+G++GnD++
gi|1194893 3193 VGSDFDDILFGNQGNDRI 3210
DUF1769: domain 1 of 2, from 3198 to 3205: score 1.4, E = 13
*->GddllFGND<-*
dd+lFGN+
gi|1194893 3198 -DDILFGNQ 3205
HemolysinCabind: domain 3 of 7, from 3211 to 3228: score 9.9, E = 0.076
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +G D +yG + +D l
gi|1194893 3211 SGEEGFDLIYGQGDADAL 3228
Gemini_mov: domain 1 of 1, from 3218 to 3234: score 1.5, E = 5.2
*->lgFGptearSALArsgavpp<-*
l++G+++a+ A+sg+v+
gi|1194893 3218 LIYGQGDAD---ALSGEVGD 3234
HemolysinCabind: domain 4 of 7, from 3229 to 3246: score 20.2, E = 6e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G G+D+L+Gg+G+D++
gi|1194893 3229 SGEVGDDVLFGGQGDDQI 3246
DUF1769: domain 2 of 2, from 3233 to 3239: score 1.5, E = 12
*->GddllFG<-*
Gdd+lFG
gi|1194893 3233 GDDVLFG 3239
HemolysinCabind: domain 5 of 7, from 3247 to 3264: score 21.8, E = 2e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+aGnD++yG+ G D+l
gi|1194893 3247 QGDAGNDIIYGDRGSDRL 3264
HemolysinCabind: domain 6 of 7, from 3265 to 3282: score 19.0, E = 0.00013
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G D L Gg GnD+l
gi|1194893 3265 WGGEGEDQLLGGFGNDRL 3282
HemolysinCabind: domain 7 of 7, from 3283 to 3300: score 16.6, E = 0.00075
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G DtL+G+ GnD +
gi|1194893 3283 IGGLGADTLTGDLGNDAF 3300
//