hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 124377417.fa
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Query sequence: gi|124377417|dbj|BAF46125.1|
Accession: [none]
Description: TpeL [Clostridium perfringens]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Gly_transf_sug Glycosyltransferase sugar-binding reg 30.3 1.6e-08 1
Myosin_head Myosin head (motor domain) 5.5 0.079 1
IpaB_EvcA IpaB/EvcA family 5.6 0.25 1
DUF662 Family of unknown function (DUF662) 5.3 0.32 1
DUF961 Bacterial protein of unknown function 6.4 0.35 1
HTH_Mga M protein trans-acting positive regul 6.8 0.52 1
Hemocyanin_C Hemocyanin, ig-like domain 5.2 0.58 1
UPF0236 Uncharacterised protein family (UPF02 0.5 0.8 1
Phage_RpbA Phage RNA polymerase binding, RpbA 4.5 0.94 1
Cleaved_Adhesin Cleaved Adhesin Domain 3.9 1 1
Sterile Male sterility protein 3.9 1.4 1
GnsAB GnsA/GnsB family 4.4 1.4 1
MA-Mit Mycoplasma arthritidis-derived mitoge 2.2 1.4 1
Rep_N Rep protein catalytic domain like 2.7 1.5 1
Allexi_40kDa Allexivirus 40kDa protein 1.9 1.6 1
Swi5 Swi5 4.4 1.7 1
Sfi1_C Spindle body associated protein C-ter 3.9 1.7 1
VID27 VID27 cytoplasmic protein 0.9 1.7 1
TIM21 TIM21 3.3 1.9 1
DUF354 Protein of unknown function (DUF354) 1.1 2 1
Ribosomal_S3_C Ribosomal protein S3, C-terminal doma 3.0 2.2 1
DUF1444 Protein of unknown function (DUF1444) 2.0 2.3 1
MecA_N NTF2-like N-terminal transpeptidase d 3.4 2.4 1
DUF2472 Protein of unknown function (DUF2742) 3.4 2.4 1
RGS Regulator of G protein signaling doma 2.7 2.5 1
Bacillus_HBL Bacillus haemolytic enterotoxin (HBL) 2.7 2.6 1
WHEP-TRS WHEP-TRS domain 3.0 2.8 1
PAH Paired amphipathic helix repeat 5.0 2.8 2
DUF1274 Protein of unknown function (DUF1274) 0.7 2.9 1
DUF2373 Uncharacterised conserved protein (DU 3.7 3.1 1
P2 P2 response regulator binding domain 3.3 3.1 1
Staphostatin_B Staphostatin B 2.7 3.4 1
Pox_I1 Poxvirus protein I1 1.4 3.5 1
Cytokin_check_N Cdc14 phosphatase binding protein N-t 3.3 3.6 1
YfkB YfkB-like domain 0.4 3.6 1
Peptidase_M29 Thermophilic metalloprotease (M29) -1.7 3.7 1
DUF1577 Protein of unknown function (DUF1577) 0.2 3.7 1
essB Predicted membrane protein essB 1.6 3.8 1
AIPR AIPR protein 1.6 3.8 1
Exotox-A_bind Exotoxin A binding -0.6 4.3 1
DUF1764 Eukaryotic protein of unknown functio -0.7 4.4 1
DUF2260 Uncharacterized conserved protein (DU 1.8 4.7 1
Transposase_35 Putative transposase DNA-binding doma 3.4 5.1 1
Caps_synth Capsular polysaccharide synthesis pro 1.3 5.1 1
UPF0058 Uncharacterised protein family UPF005 1.5 5.3 1
Trehalase Trehalase 0.2 5.4 1
DUF1563 Protein of unknown function (DUF1563) 1.5 5.5 1
NADPH_Ox Respiratory burst NADPH oxidase 2.9 5.5 1
DUF2584 Protein of unknown function (DUF2584) 1.5 5.9 1
Pox_A46 Poxvirus A4/B15 family 2.3 6 1
Antimicrobial_7 Scorpion antimicrobial peptide 1.8 6.1 1
Nyv1_N Vacuolar R-SNARE Nyv1 N terminal 1.8 6.8 1
NKWYS Putative capsular polysaccharide synt 1.4 6.8 1
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogen -1.0 6.9 1
DnaB_bind DnaB-helicase binding domain of prima 3.6 7.1 1
DUF1267 Protein of unknown function (DUF1267) 1.4 7.2 1
PTA_PTB Phosphate acetyl/butaryl transferase 0.7 7.3 1
TipAS TipAS antibiotic-recognition domain 1.6 7.3 1
PPV_E2_C E2 (early) protein, C terminal 2.4 7.5 1
Ehrlichia_rpt Ehrlichia tandem repeat (Ehrlichia_rp -2.4 7.7 1
NOZZLE Plant transcription factor NOZZLE -0.7 7.9 1
Pantoate_ligase Pantoate-beta-alanine ligase -0.1 8 1
Cpn60_TCP1 TCP-1/cpn60 chaperonin family -0.5 8.1 1
NOGCT NOGCT (NUC087) domain 2.9 8.6 1
RE_HindIII HindIII restriction endonuclease 0.2 8.7 1
DUF1184 Protein of unknown function (DUF1184) -1.0 8.8 1
DUF1160 Protein of unknown function (DUF1160) 1.5 9 1
VP9 VP9 protein 1.3 9.1 1
DUF1526 Protein of unknown function (DUF1526) 0.3 9.2 1
DUF729 Protein of unknown function (DUF729) -0.2 9.6 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
UPF0058 1/1 4 12 .. 1 13 [. 1.5 5.3
Swi5 1/1 16 34 .. 44 62 .. 4.4 1.7
PAH 1/2 20 34 .. 1 15 [. 1.9 19
Trehalase 1/1 26 34 .. 571 579 .] 0.2 5.4
NOZZLE 1/1 43 51 .. 306 314 .] -0.7 7.9
DUF662 1/1 50 61 .. 149 160 .] 5.3 0.32
essB 1/1 50 65 .. 349 364 .] 1.6 3.8
DUF2373 1/1 61 79 .. 1 25 [. 3.7 3.1
Exotox-A_bind 1/1 89 102 .. 259 274 .] -0.6 4.3
Ribosomal_S3_C 1/1 145 159 .. 66 80 .. 3.0 2.2
NADPH_Ox 1/1 163 170 .. 96 103 .] 2.9 5.5
TipAS 1/1 187 210 .. 119 144 .] 1.6 7.3
DUF1184 1/1 201 246 .. 145 191 .. -1.0 8.8
MA-Mit 1/1 205 234 .. 185 214 .] 2.2 1.4
DUF1577 1/1 207 219 .. 1 14 [. 0.2 3.7
DUF1267 1/1 208 215 .. 74 81 .] 1.4 7.2
Gly_transf_sug 1/1 234 291 .. 1 67 [. 30.3 1.6e-08
Caps_synth 1/1 269 287 .. 124 142 .. 1.3 5.1
Cytokin_check_N 1/1 270 280 .. 66 76 .] 3.3 3.6
Sterile 1/1 290 300 .. 95 105 .] 3.9 1.4
UPF0236 1/1 293 301 .. 1 9 [. 0.5 0.8
Pantoate_ligase 1/1 314 336 .. 1 24 [. -0.1 8
DUF2472 1/1 320 353 .. 25 75 .. 3.4 2.4
DUF2260 1/1 331 348 .. 90 107 .. 1.8 4.7
RGS 1/1 355 363 .. 123 131 .] 2.7 2.5
Transposase_35 1/1 521 531 .. 1 11 [. 3.4 5.1
RE_HindIII 1/1 550 570 .. 314 338 .] 0.2 8.7
HTH_Mga 1/1 552 577 .. 1 27 [. 6.8 0.52
DUF1274 1/1 560 572 .. 152 164 .] 0.7 2.9
WHEP-TRS 1/1 579 590 .. 1 12 [. 3.0 2.8
PPV_E2_C 1/1 581 589 .. 1 9 [. 2.4 7.5
DUF1160 1/1 608 619 .. 113 124 .] 1.5 9
Sfi1_C 1/1 625 636 .. 109 120 .] 3.9 1.7
NOGCT 1/1 632 642 .. 36 46 .. 2.9 8.6
DUF729 1/1 636 647 .. 274 285 .] -0.2 9.6
Antimicrobial_7 1/1 675 682 .. 1 9 [. 1.8 6.1
DUF1563 1/1 686 730 .. 1 46 [] 1.5 5.5
IpaB_EvcA 1/1 722 741 .. 137 157 .] 5.6 0.25
Phage_RpbA 1/1 727 744 .. 1 20 [. 4.5 0.94
Peptidase_M29 1/1 744 759 .. 393 408 .] -1.7 3.7
DUF1764 1/1 747 775 .. 1 40 [. -0.7 4.4
Bacillus_HBL 1/1 783 811 .. 128 157 .. 2.7 2.6
DUF1444 1/1 793 810 .. 1 18 [. 2.0 2.3
NKWYS 1/1 836 867 .. 1 32 [. 1.4 6.8
P2 1/1 878 892 .. 73 93 .] 3.3 3.1
PAH 2/2 953 975 .. 8 30 .. 3.1 9.2
DUF354 1/1 1032 1072 .. 318 363 .] 1.1 2
Rep_N 1/1 1032 1052 .. 175 196 .] 2.7 1.5
DnaB_bind 1/1 1042 1059 .. 42 59 .] 3.6 7.1
MecA_N 1/1 1102 1131 .. 1 30 [. 3.4 2.4
Cleaved_Adhesin 1/1 1124 1141 .. 177 194 .] 3.9 1
Pox_I1 1/1 1274 1296 .. 290 312 .] 1.4 3.5
Allexi_40kDa 1/1 1283 1296 .. 1 14 [. 1.9 1.6
Gp_dh_N 1/1 1318 1324 .. 1 7 [. -1.0 6.9
DUF961 1/1 1329 1339 .. 98 108 .] 6.4 0.35
Cpn60_TCP1 1/1 1331 1342 .. 527 538 .] -0.5 8.1
Myosin_head 1/1 1352 1378 .. 757 788 .] 5.5 0.079
PTA_PTB 1/1 1352 1369 .. 1 20 [. 0.7 7.3
TIM21 1/1 1371 1381 .. 147 157 .] 3.3 1.9
DUF2584 1/1 1373 1395 .. 60 82 .] 1.5 5.9
YfkB 1/1 1397 1434 .. 1 38 [. 0.4 3.6
VID27 1/1 1422 1437 .. 1 16 [. 0.9 1.7
Staphostatin_B 1/1 1458 1476 .. 69 87 .. 2.7 3.4
Nyv1_N 1/1 1493 1502 .. 1 10 [. 1.8 6.8
AIPR 1/1 1503 1573 .. 263 353 .] 1.6 3.8
DUF1526 1/1 1509 1531 .. 178 203 .] 0.3 9.2
Pox_A46 1/1 1516 1542 .. 122 149 .] 2.3 6
GnsAB 1/1 1556 1563 .. 50 57 .] 4.4 1.4
Hemocyanin_C 1/1 1559 1583 .. 237 264 .] 5.2 0.58
VP9 1/1 1587 1605 .. 1 19 [. 1.3 9.1
Ehrlichia_rpt 1/1 1631 1651 .] 1 23 [. -2.4 7.7
Alignments of top-scoring domains:
UPF0058: domain 1 of 1, from 4 to 12: score 1.5, E = 5.3
*->MhGqFGKEELiqL<-*
M+ KE+Li L
gi|1243774 4 MS----KEQLIIL 12
Swi5: domain 1 of 1, from 16 to 34: score 4.4, E = 1.7
*->sqPPEkeVkkhIeLLheYN<-*
s P E e kk+ eLL eYN
gi|1243774 16 SSPKEGEYKKILELLDEYN 34
PAH: domain 1 of 2, from 20 to 34: score 1.9, E = 19
*->pekYdsFlkiLnmyk<-*
Y+++l++L++y+
gi|1243774 20 EGEYKKILELLDEYN 34
Trehalase: domain 1 of 1, from 26 to 34: score 0.2, E = 5.4
*->iLelLdlyg<-*
iLelLd+y+
gi|1243774 26 ILELLDEYN 34
NOZZLE: domain 1 of 1, from 43 to 51: score -0.7, E = 7.9
*->ntiDLsLKL<-*
n iDL LKL
gi|1243774 43 NSIDLYLKL 51
DUF662: domain 1 of 1, from 50 to 61: score 5.3, E = 0.32
*->KLEELsKtvesl<-*
KL ELsK++++
gi|1243774 50 KLNELSKSIDIY 61
essB: domain 1 of 1, from 50 to 65: score 1.6, E = 3.8
*->kLdelekeldeYeker<-*
kL+el k +d Y+k++
gi|1243774 50 KLNELSKSIDIYLKKY 65
DUF2373: domain 1 of 1, from 61 to 79: score 3.7, E = 3.1
*->LaYLdqwykdrssselPetvkeLeS<-*
YL+++++++ + +++++L S
gi|1243774 61 --YLKKYKNSKRN----NALYQLKS 79
Exotox-A_bind: domain 1 of 1, from 89 to 102: score -0.6, E = 4.3
CS --B---S---EEEE--
*->qdldiKPtvveqRlHF<-*
+d + KP e+ +HF
gi|1243774 89 KDTNLKP--LEKNIHF 102
Ribosomal_S3_C: domain 1 of 1, from 145 to 159: score 3.0, E = 2.2
*->rakIDYatkeahTkY<-*
+a+ID ++ke+ TkY
gi|1243774 145 KAIIDSSNKEVLTKY 159
NADPH_Ox: domain 1 of 1, from 163 to 170: score 2.9, E = 5.5
*->ItDqSFDs<-*
++D+SFDs
gi|1243774 163 LNDNSFDS 170
TipAS: domain 1 of 1, from 187 to 210: score 1.6, E = 7.3
CS HHHHHHGGG.STTHHHHHHHHHHHHH
*->RFtknIDkyggeGlAeflseAIeyYa<-*
+F+++++ + + ++ l++ I++Y+
gi|1243774 187 EFNNYYNTN--DNYTKSLNDVIKVYL 210
DUF1184: domain 1 of 1, from 201 to 246: score -1.0, E = 8.8
*->sngevvkssdfehynqelkkleeklrsakdvseanGfaReeiksnil
s ++v+k + +e+y + + le+ + k+v +anG a++ ++ +il
gi|1243774 201 SLNDVIKVYLIEKYLKTDEELEKYINESKEVFKANG-AKDIREYDIL 246
<-*
gi|1243774 - -
MA-Mit: domain 1 of 1, from 205 to 234: score 2.2, E = 1.4
CS HHHHHHHHHHHTT-S-GGGT-HHHHHHS--
*->vkgvylikryyegdielkttsdfakavfeD<-*
v vyli +y + d el + +k vf+
gi|1243774 205 VIKVYLIEKYLKTDEELEKYINESKEVFKA 234
DUF1577: domain 1 of 1, from 207 to 219: score 0.2, E = 3.7
*->kkkhiikkYLlaqe<-*
k++ i+kYL+ +e
gi|1243774 207 -KVYLIEKYLKTDE 219
DUF1267: domain 1 of 1, from 208 to 215: score 1.4, E = 7.2
*->vYliTKyl<-*
vYli Kyl
gi|1243774 208 VYLIEKYL 215
Gly_transf_sug: domain 1 of 1, from 234 to 291: score 30.3, E = 1.6e-08
*->ydvilvtpdleslfkdtpaypwfqeafssardPGrwpKyynaaasDl
+ ++++++ +l + + + ++qe ++ r + + a asD
gi|1243774 234 ANGAKDIREYDILDDVELKSIYEQELLM------RFN--L-ASASDI 271
lRlaiLykYGGiYlDtDvil<-*
+R +L k GGiYlD Dv +
gi|1243774 272 IRVIVLNKLGGIYLDVDVLP 291
Caps_synth: domain 1 of 1, from 269 to 287: score 1.3, E = 5.1
*->SDlLRveLLnrYGGiWiDa<-*
SD++Rv Ln+ GGi +D+
gi|1243774 269 SDIIRVIVLNKLGGIYLDV 287
Cytokin_check_N: domain 1 of 1, from 270 to 280: score 3.3, E = 3.6
*->diVRVILenel<-*
di+RVI+ n+l
gi|1243774 270 DIIRVIVLNKL 280
Sterile: domain 1 of 1, from 290 to 300: score 3.9, E = 1.4
*->irGiRkYLlKE<-*
++Gi+k+++K+
gi|1243774 290 LPGIKKHIFKD 300
UPF0236: domain 1 of 1, from 293 to 301: score 0.5, E = 0.8
*->mKKHiFEDi<-*
+KKHiF Di
gi|1243774 293 IKKHIFKDI 301
Pantoate_ligase: domain 1 of 1, from 314 to 336: score -0.1, E = 8
CS EEEESCHHHHHHHH.HHHHHC..T
*->mriietieelkefrtkelReeRFg<-*
m+++eti k+++ k + e F+
gi|1243774 314 MIQLETIMKYKQYI-KGYTENSFK 336
DUF2472: domain 1 of 1, from 320 to 353: score 3.4, E = 2.4
*->IkdateyillylnqdfedqtwqlSysgeiPselelivaPvikvvvdv
I ++++yi+ y++++f+ ++Ps+l+ + +
gi|1243774 320 IMKYKQYIKGYTENSFK----------NLPSDLQEMLQ-------EK 349
avkr<-*
+v +
gi|1243774 350 VVEK 353
DUF2260: domain 1 of 1, from 331 to 348: score 1.8, E = 4.7
*->TEnSyKYtlddfqallea<-*
TEnS+K + d+q++l++
gi|1243774 331 TENSFKNLPSDLQEMLQE 348
RGS: domain 1 of 1, from 355 to 363: score 2.7, E = 2.5
CS HTSHHHHHH
*->LkSdlYlrl<-*
LkSd+++rl
gi|1243774 355 LKSDIFQRL 363
Transposase_35: domain 1 of 1, from 521 to 531: score 3.4, E = 5.1
*->frelqrfLeYK<-*
f++++ ++eYK
gi|1243774 521 FNQVKSQIEYK 531
RE_HindIII: domain 1 of 1, from 550 to 570: score 0.2, E = 8.7
*->lkeykiesrieeidsfikgvkknrl<-*
+ e+ki ++e+ + ++ +n+l
gi|1243774 550 FNENKIIDKVEL----LNRINSNNL 570
HTH_Mga: domain 1 of 1, from 552 to 577: score 6.8, E = 0.52
*->EkdIkrklkLlelLleeeksitldDke<-*
E +I +k++Ll+ + ++ i++dDke
gi|1243774 552 ENKIIDKVELLNRINS-NNLINFDDKE 577
DUF1274: domain 1 of 1, from 560 to 572: score 0.7, E = 2.9
*->dLkkkFQlgnLde<-*
+L +++++nL+
gi|1243774 560 ELLNRINSNNLIN 572
WHEP-TRS: domain 1 of 1, from 579 to 590: score 3.0, E = 2.8
CS HHHHHHHHHHHH
*->LlskiaaQGDlV<-*
L+ i+ QGD+V
gi|1243774 579 LRYIIQLQGDKV 590
PPV_E2_C: domain 1 of 1, from 581 to 589: score 2.4, E = 7.5
CS EEEEEECEH
*->PiihLKGda<-*
+ii+L+Gd+
gi|1243774 581 YIIQLQGDK 589
DUF1160: domain 1 of 1, from 608 to 619: score 1.5, E = 9
*->LVtEiNnAiiyq<-*
LV+EiNn++ y
gi|1243774 608 LVQEINNISYYF 619
Sfi1_C: domain 1 of 1, from 625 to 636: score 3.9, E = 1.7
*->kvrnIdFnkIPe<-*
+++ I F+ IPe
gi|1243774 625 SIDSIQFDNIPE 636
NOGCT: domain 1 of 1, from 632 to 642: score 2.9, E = 8.6
*->DiiPEIldGhN<-*
D iPEIl G+N
gi|1243774 632 DNIPEILKGKN 642
DUF729: domain 1 of 1, from 636 to 647: score -0.2, E = 9.6
*->dVLKDMNkVKLR<-*
++LK+ Nk+KL
gi|1243774 636 EILKGKNKIKLT 647
Antimicrobial_7: domain 1 of 1, from 675 to 682: score 1.8, E = 6.1
*->GKvwDwIKs<-*
Kv+D IKs
gi|1243774 675 -KVLDMIKS 682
DUF1563: domain 1 of 1, from 686 to 730: score 1.5, E = 5.5
*->mKmmniiLidFFLLEtLEnLYatYvEysLKqiFLDkiqKisKadRK<
+K + i L++ + n+ tY LK + LD + Ki+ ad K
gi|1243774 686 VKEIQIDLLGCNMFSYNINVEETYPGKLLK-VVLDYVDKIYNADIK 730
-*
gi|1243774 - -
IpaB_EvcA: domain 1 of 1, from 722 to 741: score 5.6, E = 0.25
*->DkfFnkShkvsdIdIvtqrak<-*
Dk++n + ++I+I++ +
gi|1243774 722 DKIYNA-DIKPEIKISANQYE 741
Phage_RpbA: domain 1 of 1, from 727 to 744: score 4.5, E = 0.94
*->aDIqpkkirsdanpenqnKI<-*
aDI+p i +an ++ ++I
gi|1243774 727 ADIKPE-IKISAN-QYEVRI 744
Peptidase_M29: domain 1 of 1, from 744 to 759: score -1.7, E = 3.7
CS E-TTS-EEEEEETTEE
*->vteDGkRePifRrGnW<-*
+ +DGk e + +G W
gi|1243774 744 INKDGKKELLSHSGEW 759
DUF1764: domain 1 of 1, from 747 to 775: score -0.7, E = 4.4
*->KpkKkketaseDidfdslkdlkkkkskiekifeeikvkek<-*
+kK + + s ++ sk+e i++ i +ke+
gi|1243774 747 DGKKELLSHS-----------GEWLSKEEAIIKDIASKEI 775
Bacillus_HBL: domain 1 of 1, from 783 to 811: score 2.7, E = 2.6
*->qtNQkevdqlieeLkkFknkldkDtksFks<-*
+t+++e+++ i eL +F+n+ldk+++++ s
gi|1243774 783 NTIKAEAKN-IMELITFRNSLDKKLNDLES 811
DUF1444: domain 1 of 1, from 793 to 810: score 2.0, E = 2.3
*->MtsrkmrdkLkkrLqhpe<-*
M+++++r L k+L+ +e
gi|1243774 793 MELITFRNSLDKKLNDLE 810
NKWYS: domain 1 of 1, from 836 to 867: score 1.4, E = 6.8
*->ieiklnDssardmErtqllqemaFdrhinldY<-*
++D ++ ++ q l+e +++ in+dY
gi|1243774 836 FRNSFLDTINFIEDVSQELYEIKIKNNINDDY 867
P2: domain 1 of 1, from 878 to 892: score 3.3, E = 3.1
CS HTSS......S-SEEEEEEEX
*->kkisDVtlsfEvEevevkelv<-*
++is E++++++++++
gi|1243774 878 NNIS------EIKFININSGE 892
PAH: domain 2 of 2, from 953 to 975: score 3.1, E = 9.2
*->lkiLnmykakridkdelfarvse<-*
++ + +yka+++d++ l+++v++
gi|1243774 953 IQSMIDYKAQNFDFNKLSTSVKV 975
DUF354: domain 1 of 1, from 1032 to 1072: score 1.1, E = 2
*->DpkEIvnkvlryVisNlkkRkkvrtlegsmedpvelIielVenlie<
+++E +n+ +++++ l R +++ +++++I + + +e
gi|1243774 1032 NIDELINTKDELLRKELAARIGIIS-----SNMTAAISSYILYFTE 1072
-*
gi|1243774 - -
Rep_N: domain 1 of 1, from 1032 to 1052: score 2.7, E = 1.5
CS S-GGGTTTCC-HHHHHHHHHHH
*->NleEYikaClnLeeRkrLvaqf<-*
N++E+i ++L +Rk+L+a+
gi|1243774 1032 NIDELINTKDEL-LRKELAARI 1052
DnaB_bind: domain 1 of 1, from 1042 to 1059: score 3.6, E = 7.1
*->dlllqeLaeklGiddeal<-*
+ll++eLa ++Gi ++++
gi|1243774 1042 ELLRKELAARIGIISSNM 1059
MecA_N: domain 1 of 1, from 1102 to 1131: score 3.4, E = 2.4
*->daaeeaaetFldaWakgdfdtaasltseas<-*
+++ +++++++ +++k + d ++++++++s
gi|1243774 1102 EEKSKEITEYFSHISKVESDGLFKVSDNNS 1131
Cleaved_Adhesin: domain 1 of 1, from 1124 to 1141: score 3.9, E = 1
*->YnCTDifTEfLkLDDVtv<-*
++++D++ + LDD+++
gi|1243774 1124 FKVSDNNSILIPLDDIAI 1141
Pox_I1: domain 1 of 1, from 1274 to 1296: score 1.4, E = 3.5
*->kinvskVVeyLtVstvkiesleE<-*
kin+ V +V+t +i+ E
gi|1243774 1274 KINLDNVDRMFIVPTLTIDQARE 1296
Allexi_40kDa: domain 1 of 1, from 1283 to 1296: score 1.9, E = 1.6
*->MvIVTTFhIDqARd<-*
M IV T IDqAR+
gi|1243774 1283 MFIVPTLTIDQARE 1296
Gp_dh_N: domain 1 of 1, from 1318 to 1324: score -1.0, E = 6.9
CS EEEEEE-
*->ikVgING<-*
ik+ ING
gi|1243774 1318 IKIFING 1324
DUF961: domain 1 of 1, from 1329 to 1339: score 6.4, E = 0.35
*->dwylkADDiVl<-*
+w+l DDiV+
gi|1243774 1329 NWILNIDDIVK 1339
Cpn60_TCP1: domain 1 of 1, from 1331 to 1342: score -0.5, E = 8.1
*->iLtiDdiImakp<-*
iL+iDdi+++
gi|1243774 1331 ILNIDDIVKEVT 1342
Myosin_head: domain 1 of 1, from 1352 to 1378: score 5.5, E = 0.079
CS HHHHHHHHHT.....T-TGGGEEECSSEEEET
*->kgceliLqslrqtpgnlDkeeyrfGkTKiFfR<-*
k++e+i+++l ++ +++ +G+ Ki+++
gi|1243774 1352 KFIENIFKKL-----TIEDNKIIIGNQKIYLK 1378
PTA_PTB: domain 1 of 1, from 1352 to 1369: score 0.7, E = 7.3
CS HHHHHHHHHCC..S--EEEE
*->sfleriferAklnsakkrIV<-*
+f+e+if+++ ++++I+
gi|1243774 1352 KFIENIFKKLT--IEDNKII 1369
TIM21: domain 1 of 1, from 1371 to 1381: score 3.3, E = 1.9
*->gekrIylednr<-*
g+++Iyl++n+
gi|1243774 1371 GNQKIYLKNNK 1381
DUF2584: domain 1 of 1, from 1373 to 1395: score 1.5, E = 5.9
*->rKLewengkTiitYeLvSLnStN<-*
+K ++n+kT i++ L +N
gi|1243774 1373 QKIYLKNNKTNIHFSVSILDGVN 1395
YfkB: domain 1 of 1, from 1397 to 1434: score 0.4, E = 3.6
*->MYPsDFAsaLevlsLdeireaIhrLLdiRdenvWmLFG<-*
M +DF ++ lsL+ ++I ++i +n+ LFG
gi|1243774 1397 MVEVDFNNKMYHLSLQGNEKTICNNMNIIQNNINKLFG 1434
VID27: domain 1 of 1, from 1422 to 1437: score 0.9, E = 1.7
*->MNiLKkllgkfmGsgs<-*
MNi+ + k++Gs++
gi|1243774 1422 MNIIQNNINKLFGSSN 1437
Staphostatin_B: domain 1 of 1, from 1458 to 1476: score 2.7, E = 3.4
*->SiddeeltYILDYdDTnHI<-*
Si + e Y L YdD n I
gi|1243774 1458 SIKNNEFIYMLKYDDKNKI 1476
Nyv1_N: domain 1 of 1, from 1493 to 1502: score 1.8, E = 6.8
*->vSYVEviknd<-*
+SYV +i n+
gi|1243774 1493 ISYVDIISNG 1502
AIPR: domain 1 of 1, from 1503 to 1573: score 1.6, E = 3.8
*->ekiikkkkkyepfggykanivaYtilliavllilagfrvsgkeldld
+k++ k+++++ n Y i +l++l+ ++ ++++
gi|1243774 1503 DKNYLKGIWNTS-----VNNSEYKI---EFLVELID----QNTIEII 1537
eiwskqleaacadlsnklldalleiiaekvnevitnspeglgns<-*
++++ + +l++ +l++l++ e ++ i + + l+n+
gi|1243774 1538 KLNLSD------GLIKSFLTILDN--LESLDVKISTIYDFLKNI 1573
DUF1526: domain 1 of 1, from 1509 to 1531: score 0.3, E = 9.2
*->pileGiPlnvesrradiqrvleaica<-*
+i++ ++v + +i+ + e+i+
gi|1243774 1509 GIWN---TSVNNSEYKIEFLVELIDQ 1531
Pox_A46: domain 1 of 1, from 1516 to 1542: score 2.3, E = 6
*->tswsallllllkfilddvDlskiksaLq<-*
++ +++++l + i+ ++ +++ik++L
gi|1243774 1516 NNSEYKIEFLVELIDQNT-IEIIKLNLS 1542
GnsAB: domain 1 of 1, from 1556 to 1563: score 4.4, E = 1.4
*->LesydvKI<-*
Les+dvKI
gi|1243774 1556 LESLDVKI 1563
Hemocyanin_C: domain 1 of 1, from 1559 to 1583: score 5.2, E = 0.58
CS SSS--SSTTCGGCSTTTEEEEEEEEEEE
*->FDRpIddetaefFltpNMkfkDVkIyhh<-*
+D +I t+++Fl N+ f+DV+ +
gi|1243774 1559 LDVKIS--TIYDFLK-NILFRDVFLENE 1583
VP9: domain 1 of 1, from 1587 to 1605: score 1.3, E = 9.1
*->LklrsgFllsGekqtdkYE<-*
+ ++ gF l G + kYE
gi|1243774 1587 FIVSKGFVLTGNNSKNKYE 1605
Ehrlichia_rpt: domain 1 of 1, from 1631 to 1651: score -2.4, E = 7.7
*->MDIDNsNvsTadirdksdnLidv<-*
DN + +++ + s nLid+
gi|1243774 1631 --LDNGKILVSSTGESSNNLIDI 1651
//