hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 148974996.fa
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Query sequence: gi|148974996|ref|ZP_01811976.1|
Accession: [none]
Description: calmodulin-sensitive adenylate cyclase [Vibrionales bacterium SWAT-3]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Anthrax_toxA Anthrax toxin LF subunit 162.0 1.2e-48 1
FG-GAP FG-GAP repeat 89.1 4.6e-25 9
Dockerin_1 Dockerin type I repeat 10.7 0.037 5
PhageMin_Tail Phage-related minor tail protein 7.3 0.16 1
PspB Phage shock protein B 4.9 0.28 1
SPC25 Microsomal signal peptidase 25 kDa su 4.9 0.39 1
MbeB_N MbeB-like, N-term conserved region 5.6 0.62 1
Choline_kinase Choline/ethanolamine kinase 4.2 0.66 1
Peptidase_M23 Peptidase family M23 3.7 0.73 1
FTP Fungalysin/Thermolysin Propeptide Mot 6.0 0.77 1
DUF212 Divergent PAP2 family 4.3 0.8 1
PRCC_Cterm Mitotic checkpoint protein PRCC_Cterm 4.4 0.91 1
DUF1926 Domain of unknown function (DUF1926) 3.5 0.92 1
SBBP Beta-propeller repeat 5.7 0.98 1
Peptidase_S3 Alphavirus core protein 3.6 1.4 1
Img2 Mitochondrial large subunit ribosomal 4.4 1.4 1
ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP) 4.6 1.4 1
ACBP Acyl CoA binding protein 3.9 1.4 2
Cor1 Cor1/Xlr/Xmr conserved region 4.0 1.5 1
TPP_enzyme_M Thiamine pyrophosphate enzyme, centra 3.8 1.6 1
TNV_CP Satellite tobacco necrosis virus coat 2.3 1.7 1
AAA_5 ATPase family associated with various 3.2 1.9 2
Spore_SspJ Small spore protein J (Spore_SspJ) 4.0 1.9 1
Neuregulin Neuregulin family 0.5 2.2 1
DUF816 Baculovirus protein of unknown functi 2.7 2.3 1
VTC VTC domain 1.9 2.3 1
HMD H2-forming N5,N10-methylenetetrahydro 2.7 2.7 1
DUF820 Protein of unknown function (DUF820) 2.7 2.8 1
Lant_dehyd_C Lantibiotic dehydratase, C terminus 1.2 2.9 1
DUF544 Protein of unknown function (DUF544) 2.6 3 1
HAMP HAMP domain 3.6 3.2 1
DUF1763 Domain of unknown function (DUF1763) 2.9 3.5 1
DUF2382 Domain of unknown function (DUF2382) 3.5 3.5 1
SpvD Salmonella plasmid virulence protein 0.3 3.6 1
SPOR Sporulation related domain 2.7 3.7 1
DUF1181 Protein of unknown function (DUF1181) 1.3 3.9 1
Mu_I-gamma Mu DNA binding, I gamma subdomain 2.8 3.9 1
Latrophilin Latrophilin Cytoplasmic C-terminal re 0.1 4.1 1
FecR FecR protein 2.8 4.3 1
Arena_nucleocap Arenavirus nucleocapsid protein -0.9 4.3 1
RdRP RNA dependent RNA polymerase 0.6 4.3 1
ComX Bacillus competence pheromone ComX 2.9 4.4 1
Ribosomal_L38e Ribosomal L38e protein family 2.1 4.4 1
DUF2089 Uncharacterized protein conserved in 1.1 4.4 1
DASH_Dad1 DASH complex subunit Dad1 2.2 4.5 1
HTH_WhiA Sporulation Regulator WhiA C terminal 1.4 4.5 1
DUF1963 Domain of unknown function (DUF1963) 0.7 4.6 1
NosD Periplasmic copper-binding protein (N 3.3 4.6 2
DUF1293 Protein of unknown function (DUF1293) 0.4 4.8 1
DHQ_synthase 3-dehydroquinate synthase 0.9 4.9 1
RE_Bsp6I Bsp6I restriction endonuclease 1.0 5 1
CRS1_YhbY CRS1 / YhbY (CRM) domain 1.8 5.1 1
ELM2 ELM2 domain 2.3 5.2 1
BAH BAH domain 2.2 5.3 1
DUF1737 Domain of unknown function (DUF1737) 3.1 5.3 1
UPF0223 Uncharacterised protein family (UPF02 2.2 5.6 1
Dehyd-heme_bind Quinohemoprotein amine dehydrogenase 3.4 5.6 1
CsrA Global regulator protein family 1.7 6 1
Pili_assembly_N Gram-negative pili assembly chaperone 1.7 6.1 1
DUF2158 Uncharacterized small protein (DUF215 2.8 6.3 1
Shikimate_DH Shikimate / quinate 5-dehydrogenase 1.8 6.5 1
OstA_C Organic solvent tolerance protein -0.1 6.6 1
DNA_pol3_beta_2 DNA polymerase III beta subunit, cent 1.1 6.6 1
TrbI Bacterial conjugation TrbI-like prote 0.2 6.7 1
DUF1366 Protein of unknown function (DUF1366) 1.7 6.8 1
TGF_beta_GS Transforming growth factor beta type 2.4 6.9 1
Anti-adapt_IraP Sigma-S stabilisation anti-adaptor pr 2.6 7 1
ORF6C ORF6C domain 1.8 7.3 1
DUF2481 Protein of unknown function (DUF2481) 1.1 7.4 1
DUF1882 Domain of unknown function (DUF1882) 0.0 7.6 1
UBA_2 Ubiquitin associated domain (UBA) 1.5 7.6 1
PWWP PWWP domain 1.6 7.7 1
Peptidase_C26 Peptidase C26 -3.0 7.8 1
Invas_B Salmonella/Shigella invasin protein B -0.7 7.8 1
GalKase_gal_bdg Galactokinase galactose-binding signa 2.5 8.1 1
SelR SelR domain 1.6 8.4 1
F-actin_cap_A F-actin capping protein alpha subunit 0.2 8.4 1
Rtt102p Rtt102p-like transcription regulator 1.4 8.5 1
DegS Sensor protein DegS 0.7 8.5 1
Tail_tube Phage tail tube protein 1.5 8.5 1
Adaptin_binding Alpha and gamma adaptin binding prote -0.8 8.6 1
HCV_core Hepatitis C virus core protein 1.6 8.7 1
DUF1000 Domain of Unknown Function (DUF1000) 1.3 8.7 1
Ldh_1_C lactate/malate dehydrogenase, alpha/b 0.6 8.9 1
BON Putative phospholipid-binding domain 2.4 9 1
SdrG_C_C C-terminus of bacterial fibrinogen-bi 1.3 9.1 1
Kelch_2 Kelch motif 2.8 9.1 1
Frag1 Frag1/DRAM/Sfk1 family 0.6 9.2 1
Tombus_P33 Tombusvirus p33 0.7 9.3 1
DUF1433 Protein of unknown function (DUF1433) 0.6 9.4 1
Rad50_zn_hook Rad50 zinc hook motif 2.5 9.5 1
Ufd2P_core Ubiquitin elongating factor core -1.1 9.6 1
MotA_ExbB MotA/TolQ/ExbB proton channel family 1.2 9.8 1
DUF1355 Protein of unknown function (DUF1355) 0.2 10 1
Adeno_hexon Hexon, adenovirus major coat protein, -3.0 10 1
APG9 Autophagy protein Apg9 -0.9 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Anthrax_toxA 1/1 8 186 .. 1 186 [] 162.0 1.2e-48
UPF0223 1/1 22 33 .. 77 89 .] 2.2 5.6
ELM2 1/1 24 38 .. 44 58 .] 2.3 5.2
DUF1355 1/1 60 81 .. 187 215 .] 0.2 10
DUF1293 1/1 79 93 .. 101 116 .] 0.4 4.8
DUF2382 1/1 118 126 .. 1 9 [. 3.5 3.5
Peptidase_M23 1/1 152 164 .. 99 111 .] 3.7 0.73
HCV_core 1/1 252 268 .. 1 18 [. 1.6 8.7
SPC25 1/1 333 346 .. 172 185 .] 4.9 0.39
Cor1 1/1 368 390 .. 105 130 .] 4.0 1.5
DASH_Dad1 1/1 407 417 .. 1 11 [. 2.2 4.5
Dehyd-heme_bind 1/1 417 434 .. 51 68 .] 3.4 5.6
Lant_dehyd_C 1/1 435 455 .. 545 566 .] 1.2 2.9
Anti-adapt_IraP 1/1 500 547 .. 39 88 .] 2.6 7
HAMP 1/1 509 522 .. 66 79 .] 3.6 3.2
DUF212 1/1 510 542 .. 95 128 .. 4.3 0.8
SpvD 1/1 567 581 .. 1 18 [. 0.3 3.6
ORF6C 1/1 572 587 .. 42 57 .. 1.8 7.3
PWWP 1/1 627 655 .. 55 86 .] 1.6 7.7
ComX 1/1 672 692 .. 31 54 .] 2.9 4.4
Ribosomal_L38e 1/1 699 706 .. 1 8 [. 2.1 4.4
DUF2089 1/1 720 729 .. 51 60 .. 1.1 4.4
DUF1737 1/1 735 747 .. 43 55 .] 3.1 5.3
DUF2481 1/1 737 752 .. 13 28 .. 1.1 7.4
CsrA 1/1 738 752 .. 46 63 .] 1.7 6
DUF1000 1/1 759 776 .. 110 130 .] 1.3 8.7
VTC 1/1 776 785 .. 282 291 .] 1.9 2.3
DUF544 1/1 793 807 .. 136 150 .] 2.6 3
DNA_pol3_beta_2 1/1 798 810 .. 1 13 [. 1.1 6.6
Ufd2P_core 1/1 798 813 .. 704 719 .] -1.1 9.6
DHQ_synthase 1/1 799 815 .. 323 339 .] 0.9 4.9
TPP_enzyme_M 1/1 801 813 .. 1 13 [. 3.8 1.6
PhageMin_Tail 1/1 803 830 .. 199 227 .] 7.3 0.16
DUF1366 1/1 837 853 .. 111 127 .] 1.7 6.8
Dockerin_1 1/5 846 858 .. 9 21 .] 1.1 33
F-actin_cap_A 1/1 855 881 .. 223 249 .. 0.2 8.4
Adeno_hexon 1/1 913 921 .. 494 502 .] -3.0 10
Invas_B 1/1 931 939 .. 341 349 .] -0.7 7.8
Choline_kinase 1/1 967 984 .. 1 18 [. 4.2 0.66
Shikimate_DH 1/1 997 1011 .. 136 164 .] 1.8 6.5
DUF820 1/1 1002 1014 .. 113 131 .] 2.7 2.8
SPOR 1/1 1092 1122 .. 21 51 .. 2.7 3.7
DUF1963 1/1 1101 1121 .. 223 246 .. 0.7 4.6
FTP 1/1 1104 1122 .. 33 51 .] 6.0 0.77
Rad50_zn_hook 1/1 1185 1211 .. 31 57 .] 2.5 9.5
DUF1181 1/1 1199 1219 .. 100 120 .] 1.3 3.9
Tail_tube 1/1 1211 1231 .. 100 120 .] 1.5 8.5
Peptidase_S3 1/1 1243 1263 .. 138 159 .] 3.6 1.4
DUF1433 1/1 1267 1288 .. 79 100 .] 0.6 9.4
APG9 1/1 1343 1360 .. 205 222 .. -0.9 10
Ldh_1_C 1/1 1387 1426 .. 144 184 .] 0.6 8.9
MbeB_N 1/1 1401 1419 .. 34 52 .] 5.6 0.62
PspB 1/1 1489 1505 .. 40 56 .. 4.9 0.28
Rtt102p 1/1 1495 1507 .. 1 15 [. 1.4 8.5
Frag1 1/1 1525 1541 .. 238 254 .] 0.6 9.2
Peptidase_C26 1/1 1581 1587 .. 1 7 [. -3.0 7.8
MotA_ExbB 1/1 1583 1615 .. 110 141 .] 1.2 9.8
ACBP 1/2 1599 1613 .. 1 15 [. 1.1 9.6
DUF2158 1/1 1617 1627 .. 1 12 [. 2.8 6.3
TGF_beta_GS 1/1 1647 1664 .. 1 18 [. 2.4 6.9
GalKase_gal_bdg 1/1 1707 1724 .. 38 55 .] 2.5 8.1
Adaptin_binding 1/1 1765 1778 .. 1 14 [. -0.8 8.6
BAH 1/1 1778 1801 .. 136 159 .] 2.2 5.3
ACBP 2/2 1924 1939 .. 1 16 [. 2.8 3
HMD 1/1 1931 1938 .. 93 100 .] 2.7 2.7
SelR 1/1 1952 1961 .. 116 125 .] 1.6 8.4
Img2 1/1 2018 2034 .. 61 78 .] 4.4 1.4
TrbI 1/1 2033 2041 .. 194 202 .] 0.2 6.7
RE_Bsp6I 1/1 2050 2068 .. 160 180 .] 1.0 5
RdRP 1/1 2098 2105 .. 443 450 .] 0.6 4.3
DUF816 1/1 2179 2196 .. 160 177 .] 2.7 2.3
Latrophilin 1/1 2249 2254 .. 399 404 .] 0.1 4.1
AAA_5 1/2 2270 2279 .. 1 10 [. 1.6 5.3
FG-GAP 1/9 2294 2314 .. 1 36 [] 4.0 3.6
FG-GAP 2/9 2343 2370 .. 1 36 [] 12.1 0.015
Dockerin_1 2/5 2351 2357 .. 1 7 [. 1.9 19
Mu_I-gamma 1/1 2364 2378 .. 99 113 .] 2.8 3.9
FG-GAP 3/9 2396 2430 .. 1 36 [] 18.4 0.00022
Dockerin_1 3/5 2404 2414 .. 1 11 [. 4.5 3.1
FG-GAP 4/9 2474 2498 .. 7 36 .] 9.5 0.086
NosD 1/2 2475 2502 .. 45 74 .] 3.3 4.6
DUF1763 1/1 2525 2532 .. 76 83 .] 2.9 3.5
UBA_2 1/1 2540 2551 .. 1 12 [. 1.5 7.6
FecR 1/1 2613 2629 .. 1 17 [. 2.8 4.3
Kelch_2 1/1 2619 2642 .. 31 54 .] 2.8 9.1
SBBP 1/1 2680 2706 .. 1 28 [. 5.7 0.98
AAA_5 2/2 2742 2751 .. 1 10 [. 1.6 5.3
FG-GAP 5/9 2771 2789 .. 7 31 .. 3.0 6.9
PRCC_Cterm 1/1 2805 2810 .. 36 41 .] 4.4 0.91
FG-GAP 6/9 2814 2841 .. 1 36 [] 10.7 0.039
OstA_C 1/1 2845 2863 .. 1 20 [. -0.1 6.6
FG-GAP 7/9 2866 2900 .. 1 36 [] 13.1 0.0078
Dockerin_1 4/5 2874 2884 .. 1 11 [. 0.5 51
Tombus_P33 1/1 2888 2904 .. 76 92 .. 0.7 9.3
SdrG_C_C 1/1 2913 2929 .. 167 182 .] 1.3 9.1
NosD 2/2 2941 2972 .. 35 74 .] 0.0 36
FG-GAP 8/9 2943 2968 .. 6 36 .] 11.8 0.019
CRS1_YhbY 1/1 2980 3027 .. 1 48 [. 1.8 5.1
BON 1/1 2984 3003 .. 45 64 .] 2.4 9
DUF1882 1/1 2988 2997 .. 64 74 .] 0.0 7.6
FG-GAP 9/9 2991 3018 .. 1 33 [. 6.4 0.71
Dockerin_1 5/5 3000 3006 .. 1 7 [. 2.6 11
DUF1926 1/1 3000 3015 .. 1 16 [. 3.5 0.92
ACP_syn_III_C 1/1 3023 3038 .. 1 16 [. 4.6 1.4
Pili_assembly_N 1/1 3048 3070 .. 1 23 [. 1.7 6.1
HTH_WhiA 1/1 3112 3129 .. 1 19 [. 1.4 4.5
Arena_nucleocap 1/1 3119 3130 .. 525 536 .] -0.9 4.3
Spore_SspJ 1/1 3190 3198 .. 39 47 .] 4.0 1.9
TNV_CP 1/1 3191 3214 .. 1 24 [. 2.3 1.7
Neuregulin 1/1 3203 3223 .. 1 21 [. 0.5 2.2
DegS 1/1 3248 3279 .. 1 26 [. 0.7 8.5
Alignments of top-scoring domains:
Anthrax_toxA: domain 1 of 1, from 8 to 186: score 162.0, E = 1.2e-48
*->adaLkdeaaakesGvpaehadaikavArekNtvllfRpVnklaTsLI
+ e + sG++ eh a+ + Arek +llfR Vnk +TsLI
gi|1489749 8 LKNKLNEQDVEKSGLVKEHVEAFIKLAREKKVYLLFRKVNKFSTSLI 54
keGvATKGLsVhGKSSdWGpqAGYIPvdqdLSKkegrdlaviekanlevk
k G ATKGL+VhGKSSdWGp AG+IP dqdLSKk+g + +n +
gi|1489749 55 KNGAATKGLNVHGKSSDWGPMAGFIPLDQDLSKKFGNVKG-VNLGNSSNR 103
kSltEdeGeytkvDLkLskeRLeeLvreaGLVldgadeVdlvkkqyasee
Sl E ++ v L+Ls eRL eL G Vl + + ++ + + +
gi|1489749 104 TSLNEASKSIGTVALTLSEERLNEL-QSLG-VLSWDKNTKSIAITGKGAQ 151
ryefeakreSDgryeVqykrkegDDFEaVkVLGekagir<-*
yef+ k y V y++ g LG +r
gi|1489749 152 HYEFRLKGDGTNPYSVEYRTLPG----TSSTLGVNKPWR 186
UPF0223: domain 1 of 1, from 22 to 33: score 2.2, E = 5.6
*->kaKesSeegkIsm<-*
++Ke+ e++I++
gi|1489749 22 LVKEH-VEAFIKL 33
ELM2: domain 1 of 1, from 24 to 38: score 2.3, E = 5.2
*->qqkleeylllaksra<-*
++ +e +++la++++
gi|1489749 24 KEHVEAFIKLAREKK 38
DUF1355: domain 1 of 1, from 60 to 81: score 0.2, E = 10
*->tkglagkagsvveWsdLPplLGyNrtrev<-*
tkgl+ g ++W +p+ G++ +
gi|1489749 60 TKGLNV-HGKSSDW---GPMAGFI---PL 81
DUF1293: domain 1 of 1, from 79 to 93: score 0.4, E = 4.8
*->IPvDdeiKKhleASLK<-*
IP D+++ K + K
gi|1489749 79 IPLDQDLSKKF-GNVK 93
DUF2382: domain 1 of 1, from 118 to 126: score 3.5, E = 3.5
*->lpLsEErLd<-*
l+LsEErL+
gi|1489749 118 LTLSEERLN 126
Peptidase_M23: domain 1 of 1, from 152 to 164: score 3.7, E = 0.73
CS EEEEEEGGGEE--
*->HFEirknGkpvdP<-*
H+E+r +G +P
gi|1489749 152 HYEFRLKGDGTNP 164
HCV_core: domain 1 of 1, from 252 to 268: score 1.6, E = 8.7
*->SRNLGkvidtltcgfadl<-*
+NLGkv + + + +adl
gi|1489749 252 -PNLGKVPEWMKGLIADL 268
SPC25: domain 1 of 1, from 333 to 346: score 4.9, E = 0.39
*->evsrLhnaLatekk<-*
+v+rL+n L+ ek
gi|1489749 333 WVNRLYNKLIFEKG 346
Cor1: domain 1 of 1, from 368 to 390: score 4.0, E = 1.5
*->LedleknndnlltdtqeELRkemavL<-*
Le+ + n n l+ +EL+k ++ L
gi|1489749 368 LEVAKIPNSNTLV---SELKKNISPL 390
DASH_Dad1: domain 1 of 1, from 407 to 417: score 2.2, E = 4.5
*->syFerQRdlLi<-*
+F+rQR ++i
gi|1489749 407 DFFIRQRKEII 417
Dehyd-heme_bind: domain 1 of 1, from 417 to 434: score 3.4, E = 5.6
CS HHHHTHHHHHHHHSBS--
*->iAldevvpaLAkrYPLds<-*
iAl+ ++ aL +YP++
gi|1489749 417 IALKYTLEALSSNYPKGD 434
Lant_dehyd_C: domain 1 of 1, from 435 to 455: score 1.2, E = 2.9
*->enpldlelLrkelkarhgrvtl<-*
+n +elL+++++ +r++l
gi|1489749 435 HNRTAVELLFHRID-AYDRLIL 455
Anti-adapt_IraP: domain 1 of 1, from 500 to 547: score 2.6, E = 7
*->tmdkgkqfqeLiekvegAiedalqpednvnksdteLLqqyvkkLLrh
++d kq L + +++ ++dn+ k+ +e L+++v k L+
gi|1489749 500 QLDLSKQ-RVLARTLNQLVDEL-GRGDNIDKHSAEALKENVEKELSL 544
prs<-*
++
gi|1489749 545 AAL 547
HAMP: domain 1 of 1, from 509 to 522: score 3.6, E = 3.2
CS XXXXXXXXXXXXXX
*->LarafNqMaerLre<-*
Lar++Nq++++L +
gi|1489749 509 LARTLNQLVDELGR 522
DUF212: domain 1 of 1, from 510 to 542: score 4.3, E = 0.8
*->AevLNqLieelfeeveeakkwnkeheseekqkpL<-*
A+ LNqL++el +++ ++k ++ + e+ +k+L
gi|1489749 510 ARTLNQLVDELGRGDNIDKHSAEALK-ENVEKEL 542
SpvD: domain 1 of 1, from 567 to 581: score 0.3, E = 3.6
*->mRvsGsAssqdiisRins<-*
sG Assq i sR+ s
gi|1489749 567 ---SGEASSQKISSRVVS 581
ORF6C: domain 1 of 1, from 572 to 587: score 1.8, E = 7.3
*->kkKvnqkVaevlgGky<-*
++K++++V+++l+Gk+
gi|1489749 572 SQKISSRVVSLLQGKG 587
PWWP: domain 1 of 1, from 627 to 655: score 1.6, E = 7.7
CS TTEE.EEEECCCEEEC.CCHHHC--HHHHHHH
*->dhkyrawvskkrlkPlLdsdiekfhkdekrKg<-*
+hk+ ++v++ +++Pl + +ekf++ +++++
gi|1489749 627 SHKF-GGVDP-MVEPL-AAWKEKFASLRENRE 655
ComX: domain 1 of 1, from 672 to 692: score 2.9, E = 4.4
*->detkaIvdaFegleElkdpstskW<-*
d++ a +d+Fe++e ++ W
gi|1489749 672 DLSNAYIDIFEKGE---AMTSPRW 692
Ribosomal_L38e: domain 1 of 1, from 699 to 706: score 2.1, E = 4.4
*->PrqIteIK<-*
++++t+IK
gi|1489749 699 AKEVTDIK 706
DUF2089: domain 1 of 1, from 720 to 729: score 1.1, E = 4.4
*->NIKEvEKeLG<-*
NIKE+EKeL+
gi|1489749 720 NIKELEKELS 729
DUF1737: domain 1 of 1, from 735 to 747: score 3.1, E = 5.3
*->dgaaviQAvVaeg<-*
++ ++iQ++V e
gi|1489749 735 YDREIIQPIVNEN 747
DUF2481: domain 1 of 1, from 737 to 752: score 1.1, E = 7.4
*->REIISYliNedLplae<-*
REII ++Ne+L+ ++
gi|1489749 737 REIIQPIVNENLSVSK 752
CsrA: domain 1 of 1, from 738 to 752: score 1.7, E = 6
CS CHCHHHCHH-TTS..-SS
*->ElyerIlaenqkaavaSk<-*
E+ + I++en + +Sk
gi|1489749 738 EIIQPIVNENLS---VSK 752
DUF1000: domain 1 of 1, from 759 to 776: score 1.3, E = 8.7
CS ESS..--S--EESEEEEEE--
*->NdgdDedelTrIdyIgLrGes<-*
N + d +++Id++ L+G+
gi|1489749 759 NVS---DVKSKIDKLALYGDK 776
VTC: domain 1 of 1, from 776 to 785: score 1.9, E = 2.3
*->KYchGvasLf<-*
KY+h ++sLf
gi|1489749 776 KYVHEIKSLF 785
DUF544: domain 1 of 1, from 793 to 807: score 2.6, E = 3
*->gklSYnelveklvql<-*
g++S++ +ve+l++l
gi|1489749 793 GGYSREIKVEELIKL 807
DNA_pol3_beta_2: domain 1 of 1, from 798 to 810: score 1.1, E = 6.6
CS EEEHHHHHHHHHT
*->qlpqkvLkelIeq<-*
+++ ++L++lI+q
gi|1489749 798 EIKVEELIKLINQ 810
Ufd2P_core: domain 1 of 1, from 798 to 813: score -1.1, E = 9.6
*->eeeiekfeeLankvee<-*
e ++e++++L+n++++
gi|1489749 798 EIKVEELIKLINQAKK 813
DHQ_synthase: domain 1 of 1, from 799 to 815: score 0.9, E = 4.9
CS --HHHHHHHHTT-TT-B
*->ldpeelleamtrDKKvr<-*
+++eel++++ ++KK++
gi|1489749 799 IKVEELIKLINQAKKSK 815
TPP_enzyme_M: domain 1 of 1, from 801 to 813: score 3.8, E = 1.6
CS HHHHHHHHHC-SS
*->iakAaellkaAkr<-*
++++++l+++Ak+
gi|1489749 801 VEELIKLINQAKK 813
PhageMin_Tail: domain 1 of 1, from 803 to 830: score 7.3, E = 0.16
*->dileelqkklk.gltkddaqkaaalktlFG<-*
++++ ++++ k++ + ++qk ++l +lFG
gi|1489749 803 ELIKLINQAKKsKAP--TVQKKEILDKLFG 830
DUF1366: domain 1 of 1, from 837 to 853: score 1.7, E = 6.8
*->diIdtmyekevltDetl<-*
diId +++k++ +++ +
gi|1489749 837 DIIDPTLPKNAIDADRV 853
Dockerin_1: domain 1 of 5, from 846 to 858: score 1.1, E = 33
CS SHHHHHHHHHHH-
*->nalDlallkkyll<-*
na+D+ +++k ++
gi|1489749 846 NAIDADRVIKEVN 858
F-actin_cap_A: domain 1 of 1, from 855 to 881: score 0.2, E = 8.4
*->kefsesvsvssevdstAssivkaIrea<-*
ke++e++++s ++ s+ +si+++I+++
gi|1489749 855 KEVNETLPNSTTAISEIDSIIRKIKNL 881
Adeno_hexon: domain 1 of 1, from 913 to 921: score -3.0, E = 10
CS TT-EE-SEE
*->IKNLLLLPG<-*
I+NL LL G
gi|1489749 913 IRNLYLLKG 921
Invas_B: domain 1 of 1, from 931 to 939: score -0.7, E = 7.8
*->ltkfLGavG<-*
+ k+LG+ G
gi|1489749 931 IEKGLGNCG 939
Choline_kinase: domain 1 of 1, from 967 to 984: score 4.2, E = 0.66
CS --SEEEEEEE-S-.--HH
*->sgekylvRiyGagtellI<-*
+g++ ++R+ G++++++I
gi|1489749 967 EGDHAFLRVGGNSPDAII 984
Shikimate_DH: domain 1 of 1, from 997 to 1011: score 1.8, E = 6.5
CS ES.SS.SB.TTGGGSTTEEEESSSSHHHH
*->DiAVPRDiepeVgeLegvyvYnpddlkli<-*
Di ++++Ynpd k +
gi|1489749 997 DI--------------DIFLYNPDNEKVL 1011
DUF820: domain 1 of 1, from 1002 to 1014: score 2.7, E = 2.8
*->lvDpkyrrrrrerrvevyr<-*
l++p+ +++v v+r
gi|1489749 1002 LYNPD------NEKVLVHR 1014
SPOR: domain 1 of 1, from 1092 to 1122: score 2.7, E = 3.7
CS HHHHHTTT--...EEEEEETTEEEEEESS--
*->aakLrakGfaayvavvsgggtlYRVrvGpfa<-*
a++L++k+++ +v+v +++ YRV++G+ +
gi|1489749 1092 ASRLAGKHPDKTVIVQLDKDGKYRVIYGDVK 1122
DUF1963: domain 1 of 1, from 1101 to 1121: score 0.7, E = 4.6
CS ..EEEEEEE-B..GGGTB--.TTT
*->DwiLLFQlDsDydddinimWWGDs<-*
D+++ QlD D ++ ++ GD+
gi|1489749 1101 DKTVIVQLDKD--GKYRVIY-GDV 1121
FTP: domain 1 of 1, from 1104 to 1122: score 6.0, E = 0.77
*->liVhvskdGkvksvsGdfs<-*
+iV ++kdGk + ++Gd++
gi|1489749 1104 VIVQLDKDGKYRVIYGDVK 1122
Rad50_zn_hook: domain 1 of 1, from 1185 to 1211: score 2.5, E = 9.5
CS EE.-HHHHHHHHHHHHHHHHHHHHHHH
*->eLgteeekkelikeykseldrlpeelk<-*
+L+te+ ++ ++k++ + ld++ +++
gi|1489749 1185 DLETEKYRESFVKDLLVALDKKGLKTT 1211
DUF1181: domain 1 of 1, from 1199 to 1219: score 1.3, E = 3.9
*->mLvALrGKvvKAKvsFRFkEv<-*
+LvAL K K s R Ev
gi|1489749 1199 LLVALDKKGLKTTLSARAGEV 1219
Tail_tube: domain 1 of 1, from 1211 to 1231: score 1.5, E = 8.5
*->tldadeGtielkFeGdkgteq<-*
tl+a G+++++ eG k++ +
gi|1489749 1211 TLSARAGEVAVNIEGRKVSLV 1231
Peptidase_S3: domain 1 of 1, from 1243 to 1263: score 3.6, E = 1.4
*->VVtWNkkgvtvkttpEgteews<-*
V WNk+g tvk E+ e +s
gi|1489749 1243 VASWNKDG-TVKIHSEDREFSS 1263
DUF1433: domain 1 of 1, from 1267 to 1288: score 0.6, E = 9.4
*->llKPaepdaKnklSVdEI..IeKk<-*
llK ++ K l+ dEI +I K+
gi|1489749 1267 LLK--KKLTKTNLTMDEIlsIHKE 1288
APG9: domain 1 of 1, from 1343 to 1360: score -0.9, E = 10
*->epAnkYldQFPkpltevl<-*
++A++Y++ F+k +t ++
gi|1489749 1343 VHASHYVETFNKTVTDLI 1360
Ldh_1_C: domain 1 of 1, from 1387 to 1426: score 0.6, E = 8.9
CS ETTEEEEE--..---HHHHH HHHHHHHHHHHHHHHHHHHHH
*->gknGvekvleGilpLndfEr...ekleksaaeLkkeiekgfafv<-*
+k+G+ k+++ L+ Er+ e++ ++ a L ++iek f+f
gi|1489749 1387 KKDGTSKFIT----LSSTERdaiEAFSHASAKLSESIEKNFSFD 1426
MbeB_N: domain 1 of 1, from 1401 to 1419: score 5.6, E = 0.62
*->EksvreaLkesekkIsdaI<-*
E++ +ea ++++ k+s++I
gi|1489749 1401 ERDAIEAFSHASAKLSESI 1419
PspB: domain 1 of 1, from 1489 to 1505: score 4.9, E = 0.28
*->elqrLeqLsdkAekmqs<-*
+l++L +L+++Aekm +
gi|1489749 1489 DLSKLVSLIEQAEKMSA 1505
Rtt102p: domain 1 of 1, from 1495 to 1507: score 1.4, E = 8.5
*->SLIerANklsYYGnd<-*
SLIe+A k s +++
gi|1489749 1495 SLIEQAEKMS--ASS 1507
Frag1: domain 1 of 1, from 1525 to 1541: score 0.6, E = 9.2
*->fsfilFfgtfywDFkpi<-*
+ +++F t++++++++
gi|1489749 1525 ITNGIFLYTSIVELSKA 1541
Peptidase_C26: domain 1 of 1, from 1581 to 1587: score -3.0, E = 7.8
CS -EEEEE-
*->PvIGIta<-*
P++GI+a
gi|1489749 1581 PLVGIVA 1587
MotA_ExbB: domain 1 of 1, from 1583 to 1615: score 1.2, E = 9.8
*->lGLfVAIPAl.laYNvLkrkveelslkleafae<-*
+G+++AIP+l + vLk k + ++++++ +
gi|1489749 1583 VGIVAAIPSLvHNFAVLKEKFDATAKYFQTLED 1615
ACBP: domain 1 of 2, from 1599 to 1613: score 1.1, E = 9.6
*->leeqFeaAVniiqsL<-*
l+e+F+a +++q+L
gi|1489749 1599 LKEKFDATAKYFQTL 1613
DUF2158: domain 1 of 1, from 1617 to 1627: score 2.8, E = 6.3
*->FsvGDvVkLKSG<-*
++GD+V++K G
gi|1489749 1617 -VTGDIVTVKDG 1627
TGF_beta_GS: domain 1 of 1, from 1647 to 1664: score 2.4, E = 6.9
*->keladlledtttSGSGSG<-*
+ ll ++ SGSGSG
gi|1489749 1647 IYFGTLLTSKIKSGSGSG 1664
GalKase_gal_bdg: domain 1 of 1, from 1707 to 1724: score 2.5, E = 8.1
CS EEEEEEEEEEEEEEEEEE
*->fVLPmAIdlgTyvaarkr<-*
fVLP+A++++ v +
gi|1489749 1707 FVLPAALSQRLQVHLHTI 1724
Adaptin_binding: domain 1 of 1, from 1765 to 1778: score -0.8, E = 8.6
*->kTKYYtadvpiwvD<-*
kTKYY + +++ +D
gi|1489749 1765 KTKYYRTPISVTLD 1778
BAH: domain 1 of 1, from 1778 to 1801: score 2.2, E = 5.3
CS --CCCEEEEEEEEETTTCEEEE-S
*->kgeedvFfCellYdpekgsFkklp<-*
++e +++++e ++d+ k s+ +++
gi|1489749 1778 DKENRTLVFETVWDNYKRSLLDYK 1801
ACBP: domain 2 of 2, from 1924 to 1939: score 2.8, E = 3
*->leeqFeaAVniiqsLP<-*
+e F A++ii +LP
gi|1489749 1924 SETDFGEALKIIEKLP 1939
HMD: domain 1 of 1, from 1931 to 1938: score 2.7, E = 2.7
*->ALkiLekl<-*
ALki+ekl
gi|1489749 1931 ALKIIEKL 1938
SelR: domain 1 of 1, from 1952 to 1961: score 1.6, E = 8.4
CS -GGGEEEEET
*->NSASLkFipk<-*
NSASL +i+
gi|1489749 1952 NSASLSLIKL 1961
Img2: domain 1 of 1, from 2018 to 2034: score 4.4, E = 1.4
*->LrsvLeesrlGksiatrV<-*
LrsvLe +lGk i +
gi|1489749 2018 LRSVLER-HLGKAIMSDL 2034
TrbI: domain 1 of 1, from 2033 to 2041: score 0.2, E = 6.7
*->DLdFSkvYe<-*
DLdFS++++
gi|1489749 2033 DLDFSDTVK 2041
RE_Bsp6I: domain 1 of 1, from 2050 to 2068: score 1.0, E = 5
*->diePdiifdiRrcrIIEDNrl<-*
di+ +i+fd r+r++ N
gi|1489749 2050 DIQDVIVFDTKRKRVV--NAT 2068
RdRP: domain 1 of 1, from 2098 to 2105: score 0.6, E = 4.3
*->VDfpKtGv<-*
VD+p+tGv
gi|1489749 2098 VDLPRTGV 2105
DUF816: domain 1 of 1, from 2179 to 2196: score 2.7, E = 2.3
*->idtvdeysytnkstidit<-*
+d+++ y+y+++ +i ++
gi|1489749 2179 VDAFKTYNYNKQGEIRFN 2196
Latrophilin: domain 1 of 1, from 2249 to 2254: score 0.1, E = 4.1
*->qLVTSL<-*
qLVTSL
gi|1489749 2249 QLVTSL 2254
AAA_5: domain 1 of 2, from 2270 to 2279: score 1.6, E = 5.3
*->gvlLvGpPGt<-*
gv+L+G++Gt
gi|1489749 2270 GVILKGASGT 2279
FG-GAP: domain 1 of 9, from 2294 to 2314: score 4.0, E = 3.6
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCCTSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggtdgsvyll<-*
++ ++ ++D +GDG ++lv+ l
gi|1489749 2294 TAEGIWVADTDGDGEEELVT---------------L 2314
FG-GAP: domain 2 of 9, from 2343 to 2370: score 12.1, E = 0.015
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+++ ++D++GDG+ ++v+ ++ d + +
gi|1489749 2343 ERYPIFLADVDGDGKKEIVA-------FGyD--ALFR 2370
Dockerin_1: domain 2 of 5, from 2351 to 2357: score 1.9, E = 19
CS -TT-SS-
*->DvNgDGk<-*
Dv+gDGk
gi|1489749 2351 DVDGDGK 2357
Mu_I-gamma: domain 1 of 1, from 2364 to 2378: score 2.8, E = 3.9
CS SXSXXXXXXXXXXXX
*->GehaLkkLyPaQeRt<-*
G +aL++ +PaQ++
gi|1489749 2364 GYDALFRYTPAQKKY 2378
FG-GAP: domain 3 of 9, from 2396 to 2430: score 18.4, E = 0.00022
CS CCSCEEEC-TTSSSSSEEEEEETCCC SCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgad.ggt.d.gsvyll<-*
+ +++ D+nGDG++D++ +d++ ++d++++y+
gi|1489749 2396 SNYKRTVRDINGDGKADIIG----FDkETAsDgTRTYAI 2430
Dockerin_1: domain 3 of 5, from 2404 to 2414: score 4.5, E = 3.1
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
D+NgDGk + +
gi|1489749 2404 DINGDGKADII 2414
FG-GAP: domain 4 of 9, from 2474 to 2498: score 9.5, E = 0.086
CS EC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->agDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
++D+nGDG+ Dl+ ++ ++ + ++l
gi|1489749 2474 VVDYNGDGIGDLYF-------AEaNgRNFVAL 2498
NosD: domain 1 of 2, from 2475 to 2502: score 3.3, E = 4.6
*->tDlDgDGIgDtpYnippngniDylPLvaps<-*
+D +gDGIgD+ + ++ + L ++
gi|1489749 2475 VDYNGDGIGDLYFA--EANGRNFVALGRKG 2502
DUF1763: domain 1 of 1, from 2525 to 2532: score 2.9, E = 3.5
*->lKNLlrVr<-*
+KNL++V+
gi|1489749 2525 VKNLTMVD 2532
UBA_2: domain 1 of 1, from 2540 to 2551: score 1.5, E = 7.6
*->iDedvvskLSkT<-*
+ +dvv++LS+T
gi|1489749 2540 AGNDVVKALSVT 2551
FecR: domain 1 of 1, from 2613 to 2629: score 2.8, E = 4.3
*->adyrTavGerrsvtLpD<-*
++++Ta + ++tLpD
gi|1489749 2613 VNVQTAASSQVRITLPD 2629
Kelch_2: domain 1 of 1, from 2619 to 2642: score 2.8, E = 9.1
*->dlsssdllvldpetnvWeelpalp<-*
++s+ ++ ++d++ ++W+ + ++
gi|1489749 2619 ASSQVRITLPDEQAWQWRLVGDDL 2642
SBBP: domain 1 of 1, from 2680 to 2706: score 5.7, E = 0.98
*->qWstqlGPgpgasifgngIavDsnGNiY<-*
q tql ++a ++g+ I++D+ N+Y
gi|1489749 2680 QVMTQLT-HSRAHVYGQFISIDKQNNAY 2706
AAA_5: domain 2 of 2, from 2742 to 2751: score 1.6, E = 5.3
*->gvlLvGpPGt<-*
gv+L+G++Gt
gi|1489749 2742 GVILKGASGT 2751
FG-GAP: domain 5 of 9, from 2771 to 2789: score 3.0, E = 6.9
CS EC-TTSSSSSEEEEEETCCCSCC TS
*->agDlnGDGrpDlvvgaPgadggt.dg<-*
++D +GDG ++lv+ +++g
gi|1489749 2771 VADTDGDGEEELVT-------LReNG 2789
PRCC_Cterm: domain 1 of 1, from 2805 to 2810: score 4.4, E = 0.91
*->qaKYGf<-*
q+KYG+
gi|1489749 2805 QQKYGW 2810
FG-GAP: domain 6 of 9, from 2814 to 2841: score 10.7, E = 0.039
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ ++ +gD++G+G +l++ +++ vy++
gi|1489749 2814 NKLPIFFGDIDGNGEKELIA-------FGrE--VYIY 2841
OstA_C: domain 1 of 1, from 2845 to 2863: score -0.1, E = 6.6
*->knRgyrfnwkhqfrindnWs<-*
+ R+ ++k++f+++++W+
gi|1489749 2845 ERRFI-PSYKGNFTLQKGWH 2863
FG-GAP: domain 7 of 9, from 2866 to 2900: score 13.1, E = 0.0078
CS CCSCEEEC-TTSSSSSEEEEEETCCC SCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgad.ggt.d.gsvyll<-*
++++D+nGD ++D++ +d++ + d+ ++y+
gi|1489749 2866 SNNKRTVTDINGDSKADIIG----FDkETAaDgRRTYAI 2900
Dockerin_1: domain 4 of 5, from 2874 to 2884: score 0.5, E = 51
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
D+NgD k + +
gi|1489749 2874 DINGDSKADII 2884
Tombus_P33: domain 1 of 1, from 2888 to 2904: score 0.7, E = 9.3
*->akVkrkRRnsYavKvAq<-*
+ +++ +R+ Ya KvA+
gi|1489749 2888 KETAADGRRTYAIKVAM 2904
SdrG_C_C: domain 1 of 1, from 2913 to 2929: score 1.3, E = 9.1
*->ygyysyy.rgvtlgwdN<-*
y y+ ++ ++t+ w+N
gi|1489749 2913 YDGYYVAnKRITVAWKN 2929
NosD: domain 2 of 2, from 2941 to 2972: score 0.0, E = 36
*->gtGFSqtcvntDlDgDGIgDtpYnippngniDylPLvaps<-*
+ G +D +gDGI+D+ + ++ + L +
gi|1489749 2941 YEG----V--VDYNGDGISDLYFA--EANGRNFVALGSKG 2972
FG-GAP: domain 8 of 9, from 2943 to 2968: score 11.8, E = 0.019
CS EEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->aagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+++D+nGDG++Dl+ ++ ++ + ++l
gi|1489749 2943 GVVDYNGDGISDLYF-------AEaNgRNFVAL 2968
CRS1_YhbY: domain 1 of 1, from 2980 to 3027: score 1.8, E = 5.1
CS --HHHHHHHHHHHTTC-ECEEE-TTSS-HHHHHHHHHHHHHCSEEEE
*->LtekekryLRklahklkpivqiGknGvtegvieeihealkkrELvKV
++ e++ L ++ k k+ + i ++Gvte vie + + EL+K+
gi|1489749 2980 DNPFELAKLVLKGGKVKNAIDINGDGVTEVVIERANGHVETTELAKL 3026
CS E
k<-*
k
gi|1489749 3027 K 3027
BON: domain 1 of 1, from 2984 to 3003: score 2.4, E = 9
*->riarnvaGvkeVvNnievrg<-*
++a+ v+ +++V+N i+++g
gi|1489749 2984 ELAKLVLKGGKVKNAIDING 3003
DUF1882: domain 1 of 1, from 2988 to 2997: score 0.0, E = 7.6
CS SSB.TTTEES-
*->LIlakddKVEN<-*
L+l k++KV N
gi|1489749 2988 LVL-KGGKVKN 2997
FG-GAP: domain 9 of 9, from 2991 to 3018: score 6.4, E = 0.71
CS CCSCEEEC -TTSSSSSEEEEEETCCCSCC TSEE
*->fgssvaag.DlnGDGrpDlvvgaPgadggt.dgsv<-*
g v + D+nGDG +++v+ + +g v
gi|1489749 2991 KGGKVKNAiDINGDGVTEVVI-------ERaNGHV 3018
Dockerin_1: domain 5 of 5, from 3000 to 3006: score 2.6, E = 11
CS -TT-SS-
*->DvNgDGk<-*
D+NgDG+
gi|1489749 3000 DINGDGV 3006
DUF1926: domain 1 of 1, from 3000 to 3015: score 3.5, E = 0.92
CS -SSSSSS-EEEEE-SS
*->DfDfDGreEiileNen<-*
D++ DG++E+ +e++n
gi|1489749 3000 DINGDGVTEVVIERAN 3015
ACP_syn_III_C: domain 1 of 1, from 3023 to 3038: score 4.6, E = 1.4
CS HHCTT--GGG-SEEEE
*->LekaGltpeDIDwfvP<-*
L+k lt +D+ +++P
gi|1489749 3023 LAKLKLTEADVSHLIP 3038
Pili_assembly_N: domain 1 of 1, from 3048 to 3070: score 1.7, E = 6.1
CS EEEESSSEEEEETTSSEEEEEEE
*->gvvlggTRvIYpadqkevsltvs<-*
++++g++ IY ++++++ ++v+
gi|1489749 3048 NLIIGESGLIYSPSNNNTAVAVA 3070
HTH_WhiA: domain 1 of 1, from 3112 to 3129: score 1.4, E = 4.5
*->lpeelvkkdccdlraFLRG<-*
++ +++++++c ++a+ G
gi|1489749 3112 VDIKINNDSIC-FKAAISG 3129
Arena_nucleocap: domain 1 of 1, from 3119 to 3130: score -0.9, E = 4.3
*->DCiMFeaavtGs<-*
D i F+aa++G+
gi|1489749 3119 DSICFKAAISGE 3130
Spore_SspJ: domain 1 of 1, from 3190 to 3198: score 4.0, E = 1.9
*->AvqKKKnnR<-*
Av K+KnnR
gi|1489749 3190 AVTKRKNNR 3198
TNV_CP: domain 1 of 1, from 3191 to 3214: score 2.3, E = 1.7
CS --------.-----HHHHHHHHHT
*->mskkqskraskkdvkqvVksiveq<-*
++k+ ++r+s k+ k + k+++ +
gi|1489749 3191 VTKRKNNRSSFKAFKLQQKRVITS 3214
Neuregulin: domain 1 of 1, from 3203 to 3223: score 0.5, E = 2.2
*->AEELYqKRvLtitGiCidLLv<-*
A L qKRv+t G i+ Lv
gi|1489749 3203 AFKLQQKRVITSVGRDIAPLV 3223
DegS: domain 1 of 1, from 3248 to 3279: score 0.7, E = 8.5
*->dkIveKtLetvesSkeq......iFeIlEqsr<-*
k + t+ + +sSke + +++++ eI+E+++
gi|1489749 3248 SKLLAQTIAVFDSSKEKsagtdsVSEISEKAK 3279
//