hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 150384857.fa
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Query sequence: gi|150384857|ref|ZP_01923525.1|
Accession: [none]
Description: polymorphic outer membrane protein [Victivallis vadensis ATCC BAA-548]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Chlam_PMP Chlamydia polymorphic membrane protei 707.8 8.7e-210 83
Fil_haemagg Haemagluttinin repeat 15.0 0.0014 5
DUF992 Protein of unknown function (DUF992) 7.7 0.17 1
Bacteriocin_II Class II bacteriocin 8.4 0.2 2
DUF2102 Uncharacterized protein conserved in 6.0 0.33 1
SCAN SCAN domain 6.0 0.42 1
Ribosomal_S30AE Sigma 54 modulation protein / S30EA r 6.4 0.47 1
Glyco_hydro_71 Glycosyl hydrolase family 71 3.4 0.64 1
PhageP22-tail Salmonella phage P22 tailspike 1.5 0.77 1
Elong-fact-P_C Elongation factor P, C-terminal 5.6 1.1 1
M20_dimer Peptidase dimerisation domain 5.0 1.3 2
zf-LYAR LYAR-type C2HC zinc finger 3.3 1.4 1
Spore_GerAC Spore germination B3/ GerAC like, C-t 3.1 1.9 1
Transferrin Transferrin 1.8 2 1
Mitofilin Mitochondrial inner membrane protein -0.0 2.4 1
RBDV_coat Raspberry bushy dwarf virus coat prot 0.8 2.4 1
2-Hacid_dh D-isomer specific 2-hydroxyacid dehyd 2.9 2.5 1
DUF1271 Protein of unknown function (DUF1271) 3.3 2.9 1
Peptidase_C3 3C cysteine protease (picornain 3C) 1.8 3 1
Trypan_glycop Trypanosome variant surface glycoprot 2.5 3.1 1
COQ7 Ubiquinone biosynthesis protein COQ7 3.1 3.2 1
NID Nmi/IFP 35 domain (NID) 2.6 3.6 1
NPCBM_assoc NPCBM-associated, NEW3 domain of alph 3.1 3.9 1
Dev_Cell_Death Development and cell death domain 2.2 4.1 1
Pertactin Pertactin 2.9 4.2 1
V-ATPase_G Vacuolar (H+)-ATPase G subunit 2.7 4.2 1
DUF521 Protein of unknown function (DUF521) 1.2 4.4 1
Transposase_17 Transposase IS200 like 2.3 4.4 1
Semenogelin Semenogelin -0.7 4.5 1
Avidin Avidin family 1.9 4.7 1
DHQ_synthase 3-dehydroquinate synthase 0.9 4.8 1
Gp5_C Gp5 C-terminal repeat (3 copies) 3.7 5 1
Glug The GLUG motif 2.9 5 2
PFL Pyruvate formate lyase -0.9 5.1 1
DUF1847 Protein of unknown function (DUF1847) 1.6 5.1 1
DUF976 Caenorhabditis elegans protein of unk 1.3 5.5 1
UCR_TM Ubiquinol cytochrome reductase transm 2.3 5.7 1
EnY2 Transcription factor e(y)2 2.4 5.9 1
Rota_NS35 Rotavirus non-structural protein 35 0.2 6.1 1
CaMKII_AD Calcium/calmodulin dependent protein 1.9 6.3 1
Beta_elim_lyase Beta-eliminating lyase -0.0 6.5 1
Peptidase_S6 Immunoglobulin A1 protease -0.8 6.8 1
Citrate_ly_lig Citrate lyase ligase C-terminal domai 0.8 6.8 1
Reg_prop Two component regulator propeller 4.9 6.9 3
Bse634I Cfr10I/Bse634I restriction endonuclea 0.1 7.1 1
PEP-utilizers PEP-utilising enzyme, mobile domain 2.0 7.4 1
Ribonuclease_3 RNase3 domain 1.5 7.4 1
Nramp Natural resistance-associated macroph -0.1 7.6 1
DUF490 Family of unknown function (DUF490) 0.1 7.6 1
Alpha-amylase_C Alpha amylase, C-terminal all-beta do 1.2 7.8 1
Phage_Coat_A Phage Coat Protein A 2.2 7.8 1
Peptidase_M17 Cytosol aminopeptidase family, cataly 0.1 7.9 1
DUF1750 Fungal domain of unknown function (DU -2.1 8 1
Esterase_phd Esterase PHB depolymerase 0.2 8 1
FTP Fungalysin/Thermolysin Propeptide Mot 2.5 8.1 1
Autotransporter Autotransporter beta-domain 0.7 8.1 1
OGFr_III Opioid growth factor receptor repeat 3.3 8.6 1
PPP5 PPP5 0.8 8.8 1
Peptidase_M44 Protein G1 -1.1 9 1
Hexapep Bacterial transferase hexapeptide (th 3.4 9 2
Malic_M Malic enzyme, NAD binding domain -0.9 9.3 1
Kelch_1 Kelch motif 2.4 9.3 1
Asp Eukaryotic aspartyl protease -0.3 9.5 1
BAH BAH domain 1.3 9.5 1
Viral_DNA_bp ssDNA binding protein -2.3 9.6 1
TT_ORF2 TT viral ORF2 1.4 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
V-ATPase_G 1/1 2 19 .. 88 105 .] 2.7 4.2
Rota_NS35 1/1 39 53 .. 106 120 .. 0.2 6.1
PPP5 1/1 51 59 .. 89 97 .] 0.8 8.8
DUF1847 1/1 65 92 .. 9 38 .. 1.6 5.1
zf-LYAR 1/1 112 117 .. 23 28 .] 3.3 1.4
DUF1750 1/1 120 181 .. 550 611 .. -2.1 8
OGFr_III 1/1 131 151 .. 1 20 [] 3.3 8.6
2-Hacid_dh 1/1 159 221 .. 1 70 [. 2.9 2.5
M20_dimer 1/2 182 209 .. 87 116 .] 1.4 13
EnY2 1/1 187 202 .. 75 90 .] 2.4 5.9
DHQ_synthase 1/1 189 245 .. 1 60 [. 0.9 4.8
DUF2102 1/1 192 202 .. 94 104 .] 6.0 0.33
DUF521 1/1 194 217 .. 312 337 .. 1.2 4.4
SCAN 1/1 246 267 .. 75 96 .] 6.0 0.42
Semenogelin 1/1 275 310 .. 605 640 .] -0.7 4.5
TT_ORF2 1/1 293 304 .. 111 123 .] 1.4 9.9
DUF976 1/1 319 341 .. 149 171 .] 1.3 5.5
Gp5_C 1/1 484 510 .. 1 24 [] 3.7 5
DUF992 1/1 500 515 .. 137 152 .] 7.7 0.17
Pertactin 1/1 509 520 .. 1 13 [. 2.9 4.2
Transferrin 1/1 513 522 .. 55 64 .. 1.8 2
Chlam_PMP 1/83 543 566 .. 1 19 [] 5.9 2.6
Fil_haemagg 1/5 556 664 .. 1 75 [] 1.2 13
Chlam_PMP 2/83 579 593 .. 5 19 .] 8.3 0.57
Phage_Coat_A 1/1 586 600 .. 61 75 .] 2.2 7.8
Chlam_PMP 3/83 605 619 .. 4 19 .] 6.3 2
Chlam_PMP 4/83 631 655 .. 1 19 [] 11.2 0.095
Chlam_PMP 5/83 666 684 .. 1 19 [] 7.7 0.82
Peptidase_M44 1/1 690 702 .. 46 58 .. -1.1 9
Chlam_PMP 6/83 696 718 .. 1 19 [] 10.2 0.18
Dev_Cell_Death 1/1 711 724 .. 1 14 [. 2.2 4.1
Chlam_PMP 7/83 727 749 .. 1 19 [] 15.1 0.008
Chlam_PMP 8/83 760 778 .. 1 19 [] 16.0 0.0046
PFL 1/1 762 785 .. 694 726 .. -0.9 5.1
Chlam_PMP 9/83 788 812 .. 1 19 [] 4.1 7.8
Glug 1/2 821 835 .. 23 38 .] 0.3 32
Chlam_PMP 10/83 826 846 .. 1 19 [] 8.5 0.51
Chlam_PMP 11/83 854 872 .. 1 19 [] 12.3 0.047
Chlam_PMP 12/83 887 904 .. 1 19 [] 16.5 0.0035
Chlam_PMP 13/83 917 935 .. 1 19 [] 18.3 0.0011
Chlam_PMP 14/83 944 967 .. 1 19 [] 17.3 0.002
Chlam_PMP 15/83 974 991 .. 1 19 [] 15.4 0.0067
DUF490 1/1 977 994 .. 1 21 [. 0.1 7.6
Malic_M 1/1 982 993 .. 163 174 .. -0.9 9.3
Chlam_PMP 16/83 1012 1023 .. 7 19 .] 0.4 82
Chlam_PMP 17/83 1033 1051 .. 1 19 [] 6.9 1.4
Chlam_PMP 18/83 1067 1085 .. 1 19 [] 12.3 0.045
Chlam_PMP 19/83 1127 1145 .. 1 19 [] 12.3 0.046
Fil_haemagg 2/5 1129 1207 .. 1 75 [] 5.8 0.59
Chlam_PMP 20/83 1155 1170 .. 1 17 [. 1.0 55
Chlam_PMP 21/83 1181 1199 .. 1 19 [] 15.4 0.0066
Chlam_PMP 22/83 1211 1234 .. 1 19 [] 15.3 0.007
M20_dimer 2/2 1231 1254 .. 1 25 [. 3.6 3.1
Chlam_PMP 23/83 1242 1280 .. 1 19 [] 11.3 0.086
Fil_haemagg 3/5 1278 1323 .. 1 38 [. 4.8 1.2
Chlam_PMP 24/83 1289 1312 .. 1 19 [] 13.9 0.017
Nramp 1/1 1292 1304 .. 1 13 [. -0.1 7.6
Chlam_PMP 25/83 1320 1365 .. 1 19 [] 9.8 0.23
Ribonuclease_3 1/1 1360 1367 .. 93 100 .] 1.5 7.4
Chlam_PMP 26/83 1378 1396 .. 1 17 [. 10.0 0.19
NID 1/1 1386 1396 .. 80 90 .] 2.6 3.6
Chlam_PMP 27/83 1410 1434 .. 1 19 [] 9.7 0.23
Chlam_PMP 28/83 1445 1463 .. 1 19 [] 3.9 9.1
Chlam_PMP 29/83 1475 1499 .. 1 19 [] 6.4 1.9
Beta_elim_lyase 1/1 1480 1503 .. 81 106 .. -0.0 6.5
Chlam_PMP 30/83 1507 1532 .. 1 17 [. 4.4 6.7
Chlam_PMP 31/83 1545 1562 .. 1 19 [] 10.1 0.19
Chlam_PMP 32/83 1578 1614 .. 1 19 [] 7.6 0.86
Glug 2/2 1603 1629 .. 1 38 [] 2.6 6.2
Avidin 1/1 1618 1638 .. 107 127 .] 1.9 4.7
PhageP22-tail 1/1 1619 1638 .. 342 361 .. 1.5 0.77
Chlam_PMP 33/83 1635 1655 .. 3 19 .] 12.8 0.034
Chlam_PMP 34/83 1684 1701 .. 1 19 [] 17.8 0.0015
Chlam_PMP 35/83 1715 1731 .. 3 19 .] 12.2 0.05
Fil_haemagg 4/5 1741 1803 .. 1 75 [] 2.7 4.8
Chlam_PMP 36/83 1744 1762 .. 1 19 [] 17.1 0.0023
Spore_GerAC 1/1 1767 1777 .. 1 11 [. 3.1 1.9
Chlam_PMP 37/83 1770 1788 .. 1 19 [] 13.1 0.029
UCR_TM 1/1 1820 1846 .. 51 75 .] 2.3 5.7
Chlam_PMP 38/83 1835 1853 .. 1 19 [] 8.9 0.4
Reg_prop 1/3 1859 1884 .. 1 23 [] 3.0 21
Chlam_PMP 39/83 1862 1881 .. 1 19 [] 6.6 1.7
NPCBM_assoc 1/1 1879 1898 .. 34 54 .. 3.1 3.9
Chlam_PMP 40/83 1889 1908 .. 1 19 [] 12.9 0.032
Asp 1/1 1900 1941 .. 198 236 .. -0.3 9.5
Chlam_PMP 41/83 1949 1966 .. 1 19 [] 12.0 0.055
Reg_prop 2/3 1972 1996 .. 1 23 [] 1.1 63
Chlam_PMP 42/83 1975 1993 .. 1 19 [] 10.9 0.11
Chlam_PMP 43/83 2001 2018 .. 1 19 [] 8.1 0.65
FTP 1/1 2014 2038 .. 25 51 .] 2.5 8.1
Fil_haemagg 5/5 2030 2093 .. 1 75 [] 0.5 21
Chlam_PMP 44/83 2046 2078 .. 1 19 [] 1.1 52
Chlam_PMP 45/83 2089 2107 .. 1 19 [] 2.8 19
Chlam_PMP 46/83 2116 2143 .. 1 19 [] 1.3 46
Autotransporter 1/1 2152 2212 .. 236 296 .] 0.7 8.1
Chlam_PMP 47/83 2152 2177 .. 1 19 [] 1.5 42
Chlam_PMP 48/83 2190 2218 .. 1 19 [] 6.9 1.4
RBDV_coat 1/1 2195 2211 .. 258 274 .] 0.8 2.4
Peptidase_C3 1/1 2201 2214 .. 185 198 .] 1.8 3
Chlam_PMP 49/83 2227 2244 .. 1 19 [] 5.9 2.6
Chlam_PMP 50/83 2263 2289 .. 1 19 [] 1.1 53
Citrate_ly_lig 1/1 2290 2300 .. 52 62 .. 0.8 6.8
Chlam_PMP 51/83 2297 2318 .. 1 19 [] 5.5 3.3
COQ7 1/1 2313 2324 .. 89 100 .] 3.1 3.2
Chlam_PMP 52/83 2328 2342 .. 1 15 [. 7.1 1.2
BAH 1/1 2347 2368 .. 1 37 [. 1.3 9.5
Chlam_PMP 53/83 2348 2378 .. 1 19 [] 1.5 41
Hexapep 1/2 2348 2360 .. 1 13 [. 2.5 17
Ribosomal_S30AE 1/1 2382 2392 .. 1 11 [. 6.4 0.47
DUF1271 1/1 2385 2400 .. 1 16 [. 3.3 2.9
Chlam_PMP 54/83 2389 2411 .. 1 19 [] 11.3 0.087
Chlam_PMP 55/83 2422 2439 .. 1 19 [] 6.5 1.8
Chlam_PMP 56/83 2448 2466 .. 1 19 [] 6.3 2
Kelch_1 1/1 2450 2471 .. 1 22 [. 2.4 9.3
Bacteriocin_II 1/2 2454 2471 .. 19 36 .] 3.8 4.4
Esterase_phd 1/1 2470 2485 .. 211 226 .] 0.2 8
Bacteriocin_II 2/2 2484 2498 .. 22 36 .] 4.7 2.4
Chlam_PMP 57/83 2484 2501 .. 1 19 [] 6.3 2
Chlam_PMP 58/83 2520 2537 .. 5 19 .] 2.8 18
Chlam_PMP 59/83 2548 2566 .. 1 19 [] 10.5 0.14
Chlam_PMP 60/83 2575 2594 .. 1 19 [] 10.3 0.17
Chlam_PMP 61/83 2596 2621 .. 1 19 [] 10.7 0.13
Glyco_hydro_71 1/1 2614 2624 .. 389 399 .] 3.4 0.64
Chlam_PMP 62/83 2663 2681 .. 1 19 [] 12.4 0.045
Chlam_PMP 63/83 2690 2709 .. 1 19 [] 5.9 2.6
Viral_DNA_bp 1/1 2712 2739 .. 1180 1210 .] -2.3 9.6
Chlam_PMP 64/83 2717 2736 .. 1 19 [] 7.7 0.86
Bse634I 1/1 2777 2790 .. 270 284 .. 0.1 7.1
Chlam_PMP 65/83 2778 2796 .. 1 19 [] 9.1 0.35
Chlam_PMP 66/83 2804 2823 .. 1 19 [] 6.7 1.5
Chlam_PMP 67/83 2831 2850 .. 1 19 [] 5.7 2.9
Chlam_PMP 68/83 2892 2910 .. 1 19 [] 10.3 0.17
Trypan_glycop 1/1 2904 2925 .. 238 259 .] 2.5 3.1
Reg_prop 3/3 2917 2941 .. 1 23 [] 0.8 76
Chlam_PMP 69/83 2920 2938 .. 1 19 [] 8.5 0.52
Peptidase_S6 1/1 2933 2956 .. 895 919 .] -0.8 6.8
Chlam_PMP 70/83 2947 2968 .. 1 19 [] 5.2 4.1
Chlam_PMP 71/83 2980 3003 .. 4 19 .] 2.6 21
Chlam_PMP 72/83 3012 3029 .. 1 19 [] 6.8 1.5
Transposase_17 1/1 3032 3043 .. 98 109 .] 2.3 4.4
PEP-utilizers 1/1 3038 3050 .. 79 92 .] 2.0 7.4
Chlam_PMP 73/83 3042 3063 .. 1 19 [] 6.1 2.2
Chlam_PMP 74/83 3071 3092 .. 1 19 [] 4.4 6.7
CaMKII_AD 1/1 3077 3086 .. 119 128 .] 1.9 6.3
Chlam_PMP 75/83 3102 3119 .. 1 19 [] 6.2 2.2
Chlam_PMP 76/83 3123 3153 .. 1 19 [] 2.7 20
Hexapep 2/2 3123 3136 .. 1 14 [. 0.9 49
Chlam_PMP 77/83 3165 3191 .. 1 19 [] 6.7 1.6
Alpha-amylase_C 1/1 3199 3236 .. 62 121 .] 1.2 7.8
Chlam_PMP 78/83 3201 3219 .. 1 19 [] 4.5 6.2
Chlam_PMP 79/83 3227 3244 .. 1 19 [] 6.7 1.6
Chlam_PMP 80/83 3263 3281 .. 1 19 [] 0.5 77
Peptidase_M17 1/1 3270 3294 .. 301 325 .] 0.1 7.9
Mitofilin 1/1 3278 3290 .. 740 752 .] -0.0 2.4
Chlam_PMP 81/83 3295 3313 .. 1 19 [] 13.7 0.019
Elong-fact-P_C 1/1 3316 3335 .. 1 20 [. 5.6 1.1
Chlam_PMP 82/83 3324 3341 .. 1 19 [] 7.9 0.74
Chlam_PMP 83/83 3350 3369 .. 1 19 [] 12.0 0.055
Alignments of top-scoring domains:
V-ATPase_G: domain 1 of 1, from 2 to 19: score 2.7, E = 4.2
*->knkeaVvqlLLslVtdvk<-*
k+k +++ql+L+ ++ k
gi|1503848 2 KKKYKIIQLILHIFCTFK 19
Rota_NS35: domain 1 of 1, from 39 to 53: score 0.2, E = 6.1
*->visVRHLENLlLRie<-*
++sVRH ENL +R e
gi|1503848 39 PVSVRHRENLRFRSE 53
PPP5: domain 1 of 1, from 51 to 59: score 0.8, E = 8.8
*->kklPsLVei<-*
+++PsL++i
gi|1503848 51 RSEPSLIYI 59
DUF1847: domain 1 of 1, from 65 to 92: score 1.6, E = 5.1
*->eiieeslelYkgdsedarlaraAAevEgeg<-*
+i ++++ +Y+ ed+ l++aAA+vE+ +
gi|1503848 65 QITRSTIMIYRL--EDRVLFEAAAAVEAAY 92
zf-LYAR: domain 1 of 1, from 112 to 117: score 3.3, E = 1.4
CS -SS---
*->sEaEKY<-*
sEaEKY
gi|1503848 112 SEAEKY 117
DUF1750: domain 1 of 1, from 120 to 181: score -2.1, E = 8
*->asTpapLnLsanasgqatPtAtgvAspQppatnqGglDinMdlgdae
a+ p p n + s + P A+g+A++ p a G + gdae
gi|1503848 120 AAGPGPDNNADSSSAASCPGAAGPAQDGPDAEQSGDTELILIFGDAE 166
asataagetgDwVmV<-*
+ + a +gD V V
gi|1503848 167 GADQLAEQAGDNVIV 181
OGFr_III: domain 1 of 1, from 131 to 151: score 3.3, E = 8.6
*->sPsEtPGPrPAGParDEP.AE<-*
s s P AGPa+D P+AE
gi|1503848 131 SSSAASCPGAAGPAQDGPdAE 151
2-Hacid_dh: domain 1 of 1, from 159 to 221: score 2.9, E = 2.5
CS EEE-S-......-TTTHHHHHHHHHHH--..EEEE-S... S---T
RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxx
*->vllldnyqnplrrpeelallkewnkdnggvaevevkdldf.ellte.
+l++++ + + +l+++ +g +v+v+++d++e e
gi|1503848 159 ILIFGD------AEGADQLAEQ-----AGD-NVIVIRFDGdETGAEv 193
CS TGGGGGTT .-SEEE---SS-B-HHH
RF xxxxxxxx xxxxxxxxxxxxxxxxx
..elaeaakd.aadalvvrsntpvtael<-*
+ +aea+ ++++d v+ s + + ++
gi|1503848 194 ldRIAEALDGrTVDRAVIVSAAEADSDF 221
M20_dimer: domain 1 of 2, from 182 to 209: score 1.4, E = 13
CS EEESSCCCHHHHHHHHHHHHHHHTTTSS T-
*->iRDFDllpgedleellkeieaileeeap.ge<-*
iR + e+ +e+l++i+++l+ + ++ +
gi|1503848 182 IR---FDGDETGAEVLDRIAEALDGRTVdRA 209
EnY2: domain 1 of 1, from 187 to 202: score 2.4, E = 5.9
*->deVKeelLqrIrtfLd<-*
de+ +e+L rI ++Ld
gi|1503848 187 DETGAEVLDRIAEALD 202
DHQ_synthase: domain 1 of 1, from 189 to 245: score 0.9, E = 4.8
CS CCCHHHHHS...SS..S--CEEEEEEEHHHHHHHHHHHHHHHHH
*->IGeGllddlgellaellkgrrvvivtdetvaklygekveeaLka...
G +ld+++e l ++ +r+viv a+ + + +++ L+a+ +
gi|1503848 189 TGAEVLDRIAEALDG-RTVDRAVIV----SAAEADSDFRDGLQAhlg 230
CS CT-EEEEEEE-SSGGG
aGfevevivipdGEts<-*
+++ev+v+ p+ E++
gi|1503848 231 ENAEVDVL-NPGSESY 245
DUF2102: domain 1 of 1, from 192 to 202: score 6.0, E = 0.33
*->klLpkIsrALe<-*
++L++I++AL+
gi|1503848 192 EVLDRIAEALD 202
DUF521: domain 1 of 1, from 194 to 217: score 1.2, E = 4.4
*->lrelaelLrgrkkavsvplwVttsRa<-*
l ++ae+L+gr+ v+++++V ++ a
gi|1503848 194 LDRIAEALDGRT--VDRAVIVSAAEA 217
SCAN: domain 1 of 1, from 246 to 267: score 6.0, E = 0.42
CS HHHHHHHHHHHHHH-----XXX
*->gEEaVtLlEdLerelDepgqqV<-*
+ E ++L+Ed+ e D+ ++qV
gi|1503848 246 SDEFAALMEDFSAEQDDGEEQV 267
Semenogelin: domain 1 of 1, from 275 to 310: score -0.7, E = 4.5
*->qhessggldiviiEhEvddDdrLtqhynndrnpift<-*
q+ sg ++vii Ev d d+++ ++ ++ ++
gi|1503848 275 QESESGRRELVIIGSEVKDADKIAAEFGDNTDVLYL 310
TT_ORF2: domain 1 of 1, from 293 to 304: score 1.4, E = 9.9
*->DLDlLFaedfgde<-*
D+D++ a++fgd
gi|1503848 293 DADKI-AAEFGDN 304
DUF976: domain 1 of 1, from 319 to 341: score 1.3, E = 5.5
*->dvnEfmdsdrdkfGeLeieilee<-*
++nEf+d + d++ +++i + ++
gi|1503848 319 QINEFLDNADDQYDAIRIFSHGN 341
Gp5_C: domain 1 of 1, from 484 to 510: score 3.7, E = 5
CS S-EEEE ESS-EEEEESSEEEEEES
*->Gneslt...VkGnrtvtVgGnqTtsVg<-*
Gn++lt ++ G ++++g n T++V+
gi|1503848 484 GNYTLTwtgAAGGTMFNIGANLTVTVS 510
DUF992: domain 1 of 1, from 500 to 515: score 7.7, E = 0.17
*->QtGlNvAaGvssLtLr<-*
++G N++++vssLtL
gi|1503848 500 NIGANLTVTVSSLTLD 515
Pertactin: domain 1 of 1, from 509 to 520: score 2.9, E = 4.2
*->VaaLaLsgDGtVd<-*
V +L+L+g GtV+
gi|1503848 509 VSSLTLDG-GTVY 520
Transferrin: domain 1 of 1, from 513 to 522: score 1.8, E = 2
CS EEEHHHHHHH
*->TLDGGlvyeA<-*
TLDGG+vyeA
gi|1503848 513 TLDGGTVYEA 522
Chlam_PMP: domain 1 of 83, from 543 to 566: score 5.9, E = 2.6
*->ditFsgNsa.....aggGGAiyas<-*
++t++g++++++ ag+GGA+ a
gi|1503848 543 AVTLTGITMhngyaAGNGGAVNAA 566
Fil_haemagg: domain 1 of 5, from 556 to 664: score 1.2, E = 13
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE-S
*->vaaGaltlnaa...........alggldlnnggtlsagggltltaag
+a++ + +naa +++ ++++++g+ ++++gg++ ++gg++++++g
gi|1503848 556 AAGNGGAVNAAagstlvisggdYSGNYATGRGGAIYSAGGIDVQGNG 602
CS -EEESSE.................. .E
llnnggtliaggdlllaagalrngg.......................dl
+ g+ +gg++ +a+++ + + +++++ ++++ + ++++++++++
gi|1503848 603 TGFTGNRAGGGGAIAIAGASSSLTIsgdntvfrdnqagaapetggeggAI 652
CS EEEESS-EEEEE
tltaaGdLdnsg<-*
+++ + +L+ sg
gi|1503848 653 NISGGATLTISG 664
Chlam_PMP: domain 2 of 83, from 579 to 593: score 8.3, E = 0.57
*->sgNsaaggGGAiyas<-*
sgN a+g+GGAiy+
gi|1503848 579 SGNYATGRGGAIYSA 593
Phage_Coat_A: domain 1 of 1, from 586 to 600: score 2.2, E = 7.8
CS ETTEEEEEEEEEEEE
*->yegcLyeltGvvvqg<-*
+ g++y + G+ vqg
gi|1503848 586 RGGAIYSAGGIDVQG 600
Chlam_PMP: domain 3 of 83, from 605 to 619: score 6.3, E = 2
*->FsgNsaaggGGAiyas<-*
F+gN+a ggGGAi
gi|1503848 605 FTGNRA-GGGGAIAIA 619
Chlam_PMP: domain 4 of 83, from 631 to 655: score 11.2, E = 0.095
*->ditFsgNsa......aggGGAiyas<-*
+++F +N+a+ ++++g GGAi s
gi|1503848 631 NTVFRDNQAgaapetGGEGGAINIS 655
Chlam_PMP: domain 5 of 83, from 666 to 684: score 7.7, E = 0.82
*->ditFsgNsaaggGGAiyas<-*
++++sgN++ g GGA+y+
gi|1503848 666 GTVISGNRGMGYGGAVYSG 684
Peptidase_M44: domain 1 of 1, from 690 to 702: score -1.1, E = 9
*->iLISFDatrFvAN<-*
iLIS D+trF+ N
gi|1503848 690 ILISGDSTRFLNN 702
Chlam_PMP: domain 6 of 83, from 696 to 718: score 10.2, E = 0.18
*->ditFsgNsa....aggGGAiyas<-*
++ F +N+a ++++g GGAi+
gi|1503848 696 STRFLNNEAfrhkNGLGGAIFFA 718
Dev_Cell_Death: domain 1 of 1, from 711 to 724: score 2.2, E = 4.1
*->lgGaIFmCNnkTkr<-*
lgGaIF + n T++
gi|1503848 711 LGGAIFFAGNLTIT 724
Chlam_PMP: domain 7 of 83, from 727 to 749: score 15.1, E = 0.008
*->ditFsgNsa....aggGGAiyas<-*
di F gN++ + ++GGAi+++
gi|1503848 727 DILFQGNKSvtaaDADGGAISGQ 749
Chlam_PMP: domain 8 of 83, from 760 to 778: score 16.0, E = 0.0046
*->ditFsgNsaaggGGAiyas<-*
+i F gN+a++ GGAiy++
gi|1503848 760 NIKFIGNQANNYGGAIYTQ 778
PFL: domain 1 of 1, from 762 to 785: score -0.9, E = 5.1
CS HHHH.HTTS--GGG-......EEEEEE--TTHH
*->eyikGelrkhpnYRgGpGPvGakpTasilTIts<-*
++i+ ++ nY g a +T+++ TIt+
gi|1503848 762 KFIG---NQANNYGG------AIYTQGVITITA 785
Chlam_PMP: domain 9 of 83, from 788 to 812: score 4.1, E = 7.8
*->ditFsgNsa......aggGGAiyas<-*
F N++ + + +++gGGAiy +
gi|1503848 788 KALFHQNQIvgvtfgSNGGGAIYVT 812
Glug: domain 1 of 2, from 821 to 835: score 0.3, E = 32
*->pgsienctatgnvtvt<-*
++sien+t+t n +v+
gi|1503848 821 VSSIENVTFTQN-SVS 835
Chlam_PMP: domain 10 of 83, from 826 to 846: score 8.5, E = 0.51
*->ditFsgNsa..aggGGAiyas<-*
++tF+ Ns++++g GGA++
gi|1503848 826 NVTFTQNSVsnGGVGGAVLLH 846
Chlam_PMP: domain 11 of 83, from 854 to 872: score 12.3, E = 0.047
*->ditFsgNsaaggGGAiyas<-*
+++F++N+a++ GGAi
gi|1503848 854 ECIFTENTATSYGGAIGVG 872
Chlam_PMP: domain 12 of 83, from 887 to 904: score 16.5, E = 0.0035
*->ditFsgNsaaggGGAiyas<-*
d+tF+gNsa + GGAi++
gi|1503848 887 DSTFTGNSA-NYGGAISSY 904
Chlam_PMP: domain 13 of 83, from 917 to 935: score 18.3, E = 0.0011
*->ditFsgNsaaggGGAiyas<-*
++tF+gN+aa++GGAiy +
gi|1503848 917 GSTFTGNTAANSGGAIYHT 935
Chlam_PMP: domain 14 of 83, from 944 to 967: score 17.3, E = 0.002
*->ditFsgNsa.....aggGGAiyas<-*
d+tF+ N+a++ + ++gGGAiy++
gi|1503848 944 DSTFTQNRAngasaSYGGGAIYTN 967
Chlam_PMP: domain 15 of 83, from 974 to 991: score 15.4, E = 0.0067
*->ditFsgNsaaggGGAiyas<-*
++tFsgNsa +GG+i+a+
gi|1503848 974 ESTFSGNSA-TNGGVIFAT 991
DUF490: domain 1 of 1, from 977 to 994: score 0.1, E = 7.6
*->ldglsatglgggGtltasGtl<-*
++g+sat +gG + a+G++
gi|1503848 977 FSGNSAT---NGGVIFATGSA 994
Malic_M: domain 1 of 1, from 982 to 993: score -0.9, E = 9.3
CS TTTSECEEEESS
*->wtagrvlfATGS<-*
+t+g v+fATGS
gi|1503848 982 ATNGGVIFATGS 993
Chlam_PMP: domain 16 of 83, from 1012 to 1023: score 0.4, E = 82
*->NsaaggGGAiyas<-*
Nsa + GG++y +
gi|1503848 1012 NSA-VTGGGVYLT 1023
Chlam_PMP: domain 17 of 83, from 1033 to 1051: score 6.9, E = 1.4
*->ditFsgNsaaggGGAiyas<-*
++++s+Nsa++gGG+ + +
gi|1503848 1033 GSVISHNSASSGGGVAVVT 1051
Chlam_PMP: domain 18 of 83, from 1067 to 1085: score 12.3, E = 0.045
*->ditFsgNsaaggGGAiyas<-*
++++ +Nsa+g+GG+iyas
gi|1503848 1067 TSSIHSNSATGSGGGIYAS 1085
Chlam_PMP: domain 19 of 83, from 1127 to 1145: score 12.3, E = 0.046
*->ditFsgNsaaggGGAiyas<-*
++++s+N+a+g+GG+i+
gi|1503848 1127 TSVISHNAATGNGGGIHVA 1145
Fil_haemagg: domain 2 of 5, from 1129 to 1207: score 5.8, E = 0.59
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EE ESSE...
*->vaaGaltlnaaalggldlnnggtlsagggltltaaglln.nggtlia
v++++ +++ngg + + gl+lt a +n n +t +
gi|1503848 1129 VISHN----------AATGNGGGIHVASGLGLTLADGFNiNSNTAQY 1165
CS ............... .EEEEESS-EEEEE
ggdlllaagalrngg.............dltltaaGdLdnsg<-*
gg++ +gal+ +g+++ ++++ + +++++ ++aG+++++g
gi|1503848 1166 GGGIYMVSGALAITGpgtfsgntasisgGGIYSSAGTVSLAG 1207
Chlam_PMP: domain 20 of 83, from 1155 to 1170: score 1.0, E = 55
*->ditFsgNsaaggGGAiy<-*
+ +++N+a GG+iy
gi|1503848 1155 GFNINSNTA-QYGGGIY 1170
Chlam_PMP: domain 21 of 83, from 1181 to 1199: score 15.4, E = 0.0066
*->ditFsgNsaaggGGAiyas<-*
tFsgN+a+ +GG+iy+s
gi|1503848 1181 PGTFSGNTASISGGGIYSS 1199
Chlam_PMP: domain 22 of 83, from 1211 to 1234: score 15.3, E = 0.007
*->ditFsgNsa.....aggGGAiyas<-*
+++F+gN+a+++++ gGGA+y +
gi|1503848 1211 GLVFTGNIAkgtgtDTGGGAVYHK 1234
M20_dimer: domain 2 of 2, from 1231 to 1254: score 3.6, E = 3.1
CS SEE-EEEEEEEE..EE-B-EECCC-
*->igrkGlaggkltVkvkGkagHsgsy<-*
+ +kG+++++ V++ G ++H+g +
gi|1503848 1231 VYHKGAMTVTGNVQFIGNKAHAG-A 1254
Chlam_PMP: domain 23 of 83, from 1242 to 1280: score 11.3, E = 0.086
*->ditFsgNsa....................aggGGAiyas<-*
++ F gN+a+ + + ++++++ + + +g+GGAi++
gi|1503848 1242 NVQFIGNKAhagaqvqtgtdrygyaiynwGGSGGAIFSA 1280
Fil_haemagg: domain 3 of 5, from 1278 to 1323: score 4.8, E = 1.2
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE-S-E
*->vaaGaltlnaa........alggldlnnggtlsagggltltaagll<
+aG+lt++ ++ ++ a+g+++ +gg++ ag g++l+++ ++
gi|1503848 1278 FSAGSLTIRDGdvlfegnvAAGTGYGYGGGAVFAGSGVNLSGKVTF 1323
CS
-*
gi|1503848 - -
Chlam_PMP: domain 24 of 83, from 1289 to 1312: score 13.9, E = 0.017
*->ditFsgNsa.....aggGGAiyas<-*
d+ F+gN a +++ ++gGGA++a
gi|1503848 1289 DVLFEGNVAagtgyGYGGGAVFAG 1312
Nramp: domain 1 of 1, from 1292 to 1304: score -0.1, E = 7.6
*->yetdlqAGAqagY<-*
+e+++ AG +gY
gi|1503848 1292 FEGNVAAGTGYGY 1304
Chlam_PMP: domain 25 of 83, from 1320 to 1365: score 9.8, E = 0.23
*->ditFsgNsa...........................aggGGAiyas<
+tF +N+a+ + +++ ++ +++ +++ ++ +++g+GGAiy
gi|1503848 1320 KVTFRDNLAtadastrvdtirrtifgtnidtavystGGDGGAIYLA 1365
-*
gi|1503848 - -
Ribonuclease_3: domain 1 of 1, from 1360 to 1367: score 1.5, E = 7.4
CS HHHHHHCT
*->GAiyLDgG<-*
GAiyL gG
gi|1503848 1360 GAIYLAGG 1367
Chlam_PMP: domain 26 of 83, from 1378 to 1396: score 10.0, E = 0.19
*->ditFsgNsa..aggGGAiy<-*
+i+F+gN+a++ +gGGA+y
gi|1503848 1378 SIVFDGNIAkgRNGGGAVY 1396
NID: domain 1 of 1, from 1386 to 1396: score 2.6, E = 3.6
*->gKsrNGGGeVd<-*
+K rNGGG V
gi|1503848 1386 AKGRNGGGAVY 1396
Chlam_PMP: domain 27 of 83, from 1410 to 1434: score 9.7, E = 0.23
*->ditFsgNsa......aggGGAiyas<-*
++ F+ N+a++++++++ GGA+++
gi|1503848 1410 EVLFTRNGApddpsdYSVGGAFFCD 1434
Chlam_PMP: domain 28 of 83, from 1445 to 1463: score 3.9, E = 9.1
*->ditFsgNsaaggGGAiyas<-*
++ F +N a ++ GAi++
gi|1503848 1445 NTAFIENYAENFAGAIHSY 1463
Chlam_PMP: domain 29 of 83, from 1475 to 1499: score 6.4, E = 1.9
*->ditFsgNsa......aggGGAiyas<-*
i F gN + ++++ gGGAi +
gi|1503848 1475 YILFKGNYVlgnnsvRTGGGAIEIQ 1499
Beta_elim_lyase: domain 1 of 1, from 1480 to 1503: score -0.0, E = 6.5
CS ..EEEECCHHCCCCHHHHH..CT-EE
*->GdvvlaHihfdEtGghaelytgGaqp<-*
G++vl++ ++Gg++e+ +++++
gi|1503848 1480 GNYVLGNNSVRTGGGAIEI--QQGVL 1503
Chlam_PMP: domain 30 of 83, from 1507 to 1532: score 4.4, E = 6.7
*->ditFsgNsa.........aggGGAiy<-*
+ F+gNs+ +++ +++ + GGA++
gi|1503848 1507 YVRFEGNSVyktsastsyEAYGGAVF 1532
Chlam_PMP: domain 31 of 83, from 1545 to 1562: score 10.1, E = 0.19
*->ditFsgNsaaggGGAiyas<-*
++F +Nsa +GGA+y
gi|1503848 1545 HCEFVDNSA-QFGGALYVG 1562
Chlam_PMP: domain 32 of 83, from 1578 to 1614: score 7.6, E = 0.86
*->ditFsgNsa..................aggGGAiyas<-*
+++F+gN+a ++++++ +++++ a++GGAi
gi|1503848 1578 ESVFDGNRAvalmrntstgvitentslAADGGAIGLG 1614
Glug: domain 2 of 2, from 1603 to 1629: score 2.6, E = 6.2
*->gnsavGGLvGgaegggrGeqenpgsienctatgnvtvt<-*
+ a GG +G +g gs+++c + g ++t
gi|1503848 1603 SLAADGGAIGLGTG---------GSVSDCASAG--KLT 1629
Avidin: domain 1 of 1, from 1618 to 1638: score 1.9, E = 4.7
CS --SSGGGGGGSEEEEEEEEEE
*->sveaigdaWksilvGaDtFTr<-*
sv++++ a k +l G +tFT
gi|1503848 1618 SVSDCASAGKLTLSGENTFTN 1638
PhageP22-tail: domain 1 of 1, from 1619 to 1638: score 1.5, E = 0.77
*->VeDCAGaGilllafervFsN<-*
V DCA aG l l e +F+N
gi|1503848 1619 VSDCASAGKLTLSGENTFTN 1638
Chlam_PMP: domain 33 of 83, from 1635 to 1655: score 12.8, E = 0.034
*->tFsgNsa....aggGGAiyas<-*
tF++N+a + ++g+GGAi+ s
gi|1503848 1635 TFTNNLAisakTGRGGAIFVS 1655
Chlam_PMP: domain 34 of 83, from 1684 to 1701: score 17.8, E = 0.0015
*->ditFsgNsaaggGGAiyas<-*
+++F+gN+a +GGAiy +
gi|1503848 1684 NTVFTGNEA-TDGGAIYLQ 1701
Chlam_PMP: domain 35 of 83, from 1715 to 1731: score 12.2, E = 0.05
*->tFsgNsaaggGGAiyas<-*
tF++N+a+++GGAiy
gi|1503848 1715 TFTDNAASRNGGAIYFD 1731
Fil_haemagg: domain 4 of 5, from 1741 to 1803: score 2.7, E = 4.8
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
+++G + + + gg++ ++++ t+++a+++n ++ ++g
gi|1503848 1741 TLTGMTFTDNT-----AGSDGGAIYSARAFTVSGAAVFNGNNAGASG 1782
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
g++ ++++ +++ + + ++ +g
gi|1503848 1783 GAIYATGA-------AAVVTLDGVTIGG 1803
Chlam_PMP: domain 36 of 83, from 1744 to 1762: score 17.1, E = 0.0023
*->ditFsgNsaaggGGAiyas<-*
+ tF++N+a+++GGAiy+
gi|1503848 1744 GMTFTDNTAGSDGGAIYSA 1762
Spore_GerAC: domain 1 of 1, from 1767 to 1777: score 3.1, E = 1.9
*->lsGaAvFkGKk<-*
sGaAvF+G++
gi|1503848 1767 VSGAAVFNGNN 1777
Chlam_PMP: domain 37 of 83, from 1770 to 1788: score 13.1, E = 0.029
*->ditFsgNsaaggGGAiyas<-*
+ +F+gN a+++GGAiya+
gi|1503848 1770 AAVFNGNNAGASGGAIYAT 1788
UCR_TM: domain 1 of 1, from 1820 to 1846: score 2.3, E = 5.7
*->ggvlsaaaakeaV..qtfiSsmSASAD<-*
ggv+ aa+ak a ++ +iS+ AS D
gi|1503848 1820 GGVALAAGAKLAMvnNAVISYNTASSD 1846
Chlam_PMP: domain 38 of 83, from 1835 to 1853: score 8.9, E = 0.4
*->ditFsgNsaaggGGAiyas<-*
+ ++s N+a+++GG+i+a
gi|1503848 1835 NAVISYNTASSDGGGIHAA 1853
Reg_prop: domain 1 of 3, from 1859 to 1884: score 3.0, E = 21
*->slpgg.vtfalledsdG.rlWigt.n<-*
+l++g+v++ + +++G+ +W +t+
gi|1503848 1859 TLTSGsVSNNAANGGNGgGIWTATsV 1884
Chlam_PMP: domain 39 of 83, from 1862 to 1881: score 6.6, E = 1.7
*->ditFsgNsa.aggGGAiyas<-*
+ + s+N+a++g+GG+i++
gi|1503848 1862 SGSVSNNAAnGGNGGGIWTA 1881
NPCBM_assoc: domain 1 of 1, from 1879 to 1898: score 3.1, E = 3.9
*->WtEVtatspataatvppGatl<-*
Wt +t+++ ++a t++++a+l
gi|1503848 1879 WT-ATSVTIDSALTLANNAAL 1898
Chlam_PMP: domain 40 of 83, from 1889 to 1908: score 12.9, E = 0.032
*->ditFsgNsa.aggGGAiyas<-*
++t+ +N+a ag GGAiy+s
gi|1503848 1889 ALTLANNAAlAGYGGAIYGS 1908
Asp: domain 1 of 1, from 1900 to 1941: score -0.3, E = 9.5
CS T.. .. TTSSTEEEEEEEEETTEE..CEEEECEEE EEEET
RF xxx xx xxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxx
*->deg.iv.sqgyWqitldsitvggsaCHttfcssGcq...AIlDT<-*
++g+ + ++g +itld+ +gg a +t++s +++++ A++DT
gi|1503848 1900 GYGgAIyGSGSAAITLDGALIGGAA--ATANSAKFGggvALADT 1941
Chlam_PMP: domain 41 of 83, from 1949 to 1966: score 12.0, E = 0.055
*->ditFsgNsaaggGGAiyas<-*
+ ++s+N+a +GG+iyas
gi|1503848 1949 SAVISHNTA-TDGGGIYAS 1966
Reg_prop: domain 2 of 3, from 1972 to 1996: score 1.1, E = 63
*->slpgg.vtfalledsdGrlWigt.n<-*
+l++g+vt+ ++++ G ++++t+
gi|1503848 1972 TLTSGrVTNNAATGNGGGIYAATsF 1996
Chlam_PMP: domain 42 of 83, from 1975 to 1993: score 10.9, E = 0.11
*->ditFsgNsaaggGGAiyas<-*
+ ++N+a+g+GG+iya
gi|1503848 1975 SGRVTNNAATGNGGGIYAA 1993
Chlam_PMP: domain 43 of 83, from 2001 to 2018: score 8.1, E = 0.65
*->ditFsgNsaaggGGAiyas<-*
+ +Nsa ++GG+iya
gi|1503848 2001 GAAVRNNSA-ANGGGIYAD 2018
FTP: domain 1 of 1, from 2014 to 2038: score 2.5, E = 8.1
*->GipVlGgeliVhvskdGkvksvsGdfs<-*
Gi +G++++V+v +G v++ +G++
gi|1503848 2014 GIYADGASVTVTV--NGGVVGGTGAAD 2038
Fil_haemagg: domain 5 of 5, from 2030 to 2093: score 0.5, E = 21
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
v++G++ +a+ + + ++g l++g++ltlt++ + n++t +g
gi|1503848 2030 VVGGTGAADAN---TATYGGGVFLNNGANLTLTGGLVTYNTATCGGG 2073
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
++ ++++ t+ta+G +n g
gi|1503848 2074 VAVGANSA-------STITATG-ASNIG 2093
Chlam_PMP: domain 44 of 83, from 2046 to 2078: score 1.1, E = 52
*->ditFsgNsa..............aggGGAiyas<-*
+ +F +N+a+ + +++ + ++ + gGG+ ++
gi|1503848 2046 GGVFLNNGAnltltgglvtyntaTCGGGVAVGA 2078
Chlam_PMP: domain 45 of 83, from 2089 to 2107: score 2.8, E = 19
*->ditFsgNsaaggGGAiyas<-*
++ + N+a++ GG+iy
gi|1503848 2089 ASNIGYNTATRYGGGIYIG 2107
Chlam_PMP: domain 46 of 83, from 2116 to 2143: score 1.3, E = 46
*->ditFsgNsa.........aggGGAiyas<-*
+ t s N+++ ++ +++++gGG++y
gi|1503848 2116 GATVSRNAVtlatnlgsgGPGGGGVYIA 2143
Autotransporter: domain 1 of 1, from 2152 to 2212: score 0.7, E = 8.1
CS -- ------ ---- --.---------EEEEEEEEEEEEECTTEEEE
*->sr.vpvnsa.llaa.gslfgvasgtpldrtalslgaGlelklgsnls
+++v++n+++ l+++ +g+ ++++l++t +++++++ +++sn+
gi|1503848 2152 DVkVNHNTVtALSNkDGAGGGGIMIGLNGTGGEVTITGASEINSNVV 2198
CS EEEEEE....TTEEEEE
lflnysaefgsqlsdng<-*
++++a s++ ++g
gi|1503848 2199 TVGTGKA---SGIHCGG 2212
Chlam_PMP: domain 47 of 83, from 2152 to 2177: score 1.5, E = 42
*->ditFsgNsa.......aggGGAiyas<-*
d+ ++N+++ ++++++gGG+i
gi|1503848 2152 DVKVNHNTVtalsnkdGAGGGGIMIG 2177
Chlam_PMP: domain 48 of 83, from 2190 to 2218: score 6.9, E = 1.4
*->ditFsgNsa..........aggGGAiyas<-*
++++++N ++ ++++ ++ + gGG+i+ +
gi|1503848 2190 ASEINSNVVtvgtgkasgiHCGGGGILLQ 2218
RBDV_coat: domain 1 of 1, from 2195 to 2211: score 0.8, E = 2.4
*->sAvLPvGtGKsstivLt<-*
s v+ vGtGK+s i
gi|1503848 2195 SNVVTVGTGKASGIHCG 2211
Peptidase_C3: domain 1 of 1, from 2201 to 2214: score 1.8, E = 3
*->GtGKIlGiHvgGNG<-*
GtGK GiH+gG+G
gi|1503848 2201 GTGKASGIHCGGGG 2214
Chlam_PMP: domain 49 of 83, from 2227 to 2244: score 5.9, E = 2.6
*->ditFsgNsaaggGGAiyas<-*
++ +++N+a g+G Ai +
gi|1503848 2227 TTQINNNEA-GHGSAIKVQ 2244
Chlam_PMP: domain 50 of 83, from 2263 to 2289: score 1.1, E = 53
*->ditFsgNsa........aggGGAiyas<-*
++++sgN+ +++ ++++ G+Ai
gi|1503848 2263 SVVISGNHNqnqvaeggSQMGAAITLI 2289
Citrate_ly_lig: domain 1 of 1, from 2290 to 2300: score 0.8, E = 6.8
*->qGtkdLdNVtv<-*
qG++dL+NVt+
gi|1503848 2290 QGIADLKNVTL 2300
Chlam_PMP: domain 51 of 83, from 2297 to 2318: score 5.5, E = 3.3
*->ditFsgNsa...aggGGAiyas<-*
++t+++N+ +++g GG+++
gi|1503848 2297 NVTLDNNHNyhnNGLGGGFLIG 2318
COQ7: domain 1 of 1, from 2313 to 2324: score 3.1, E = 3.2
*->agfalgaGcala<-*
+gf++gaG+++a
gi|1503848 2313 GGFLIGAGSKGA 2324
Chlam_PMP: domain 52 of 83, from 2328 to 2342: score 7.1, E = 1.2
*->ditFsgNsaaggGGA<-*
d+++s+Nsaag+GG+
gi|1503848 2328 DSVISNNSAAGSGGV 2342
BAH: domain 1 of 1, from 2347 to 2368: score 1.3, E = 9.5
CS -EE-TT-EEEEEETT..............TTTEEEEE
*->etysvGDfVlvepddpvnleetfKaGrnvaleppyva<-*
+ + +GD V v++++ +++++ +
gi|1503848 2347 NRLTIGDNVKVHDNE---------------AKALAFG 2368
Chlam_PMP: domain 53 of 83, from 2348 to 2378: score 1.5, E = 41
*->ditFsgNsa............aggGGAiyas<-*
+t+ +N ++++ + ++g+GG+i a+
gi|1503848 2348 RLTIGDNVKvhdneakalafgYGRGGGINAN 2378
Hexapep: domain 1 of 2, from 2348 to 2360: score 2.5, E = 17
CS TEEECTTEEEETT
*->gviIGdnvvIgpg<-*
+IGdnv+++++
gi|1503848 2348 RLTIGDNVKVHDN 2360
Ribosomal_S30AE: domain 1 of 1, from 2382 to 2392: score 6.4, E = 0.47
CS -----SSS---
*->qlnIsGkhvei<-*
+l+I+Gk+vei
gi|1503848 2382 TLTITGKNVEI 2392
DUF1271: domain 1 of 1, from 2385 to 2400: score 3.3, E = 2.9
*->YtGeeitihdnpglCi<-*
+tG+++ i+ n ++C+
gi|1503848 2385 ITGKNVEIYNNIARCS 2400
Chlam_PMP: domain 54 of 83, from 2389 to 2411: score 11.3, E = 0.087
*->ditFsgNsa....aggGGAiyas<-*
++++ +N+a+ + +g+GG+iy
gi|1503848 2389 NVEIYNNIArcslYGSGGGIYLI 2411
Chlam_PMP: domain 55 of 83, from 2422 to 2439: score 6.5, E = 1.8
*->ditFsgNsaaggGGAiyas<-*
++++ +N++ + GG+i
gi|1503848 2422 GVSIYNNQG-PLGGGIAID 2439
Chlam_PMP: domain 56 of 83, from 2448 to 2466: score 6.3, E = 2
*->ditFsgNsaaggGGAiyas<-*
d + +N+a+++GG+iy
gi|1503848 2448 DAKIHDNTATSNGGGIYIA 2466
Kelch_1: domain 1 of 1, from 2450 to 2471: score 2.4, E = 9.3
CS BBSTEEEEETTSEEEEE-TBSS
*->pRsgagvvvldgkiYviGGydg<-*
+ + ++++ +g iY++GG++g
gi|1503848 2450 KIHDNTATSNGGGIYIAGGRSG 2471
Bacteriocin_II: domain 1 of 2, from 2454 to 2471: score 3.8, E = 4.4
CS CHHHHHHHHHHHHHHHHH
*->GqAtscIinivingwagg<-*
++Ats++++i i+g+ +g
gi|1503848 2454 NTATSNGGGIYIAGGRSG 2471
Esterase_phd: domain 1 of 1, from 2470 to 2485: score 0.2, E = 8
*->rGALaaaeRVerresG<-*
+GALa+++ V + +
gi|1503848 2470 SGALAGGPAVKLGGTT 2485
Bacteriocin_II: domain 2 of 2, from 2484 to 2498: score 4.7, E = 2.4
CS HHHHHHHHHHHHHHH
*->tscIinivingwagg<-*
t++I+++ +n++ag
gi|1503848 2484 TTEIYGNTANNGAGV 2498
Chlam_PMP: domain 57 of 83, from 2484 to 2501: score 6.3, E = 2
*->ditFsgNsaaggGGAiyas<-*
++++ gN+a ++G+++y
gi|1503848 2484 TTEIYGNTA-NNGAGVYLG 2501
Chlam_PMP: domain 58 of 83, from 2520 to 2537: score 2.8, E = 18
*->sgNsa...aggGGAiyas<-*
++N++++++++GG+iy
gi|1503848 2520 DNNTTggtSRNGGGIYVA 2537
Chlam_PMP: domain 59 of 83, from 2548 to 2566: score 10.5, E = 0.14
*->ditFsgNsaaggGGAiyas<-*
d+ + +N+a+g+GG+iy
gi|1503848 2548 DVKIRDNTAGGHGGGIYIA 2566
Chlam_PMP: domain 60 of 83, from 2575 to 2594: score 10.3, E = 0.17
*->ditFsgNsa.aggGGAiyas<-*
+ t+sgNsa +g+GG+i++
gi|1503848 2575 AGTLSGNSAlTGNGGGIWTG 2594
Chlam_PMP: domain 61 of 83, from 2596 to 2621: score 10.7, E = 0.13
*->ditFsgNsa.......aggGGAiyas<-*
++t+++N a +++ g+GG+i+as
gi|1503848 2596 ALTLDDNFAvisnsalKGNGGGIFAS 2621
Glyco_hydro_71: domain 1 of 1, from 2614 to 2624: score 3.4, E = 0.64
*->rqttvlAsGtG<-*
+++++ AsGtG
gi|1503848 2614 NGGGIFASGTG 2624
Chlam_PMP: domain 62 of 83, from 2663 to 2681: score 12.4, E = 0.045
*->ditFsgNsaaggGGAiyas<-*
+ ++s+N+a+ +GG+iya
gi|1503848 2663 GAVISHNTATTDGGGIYAA 2681
Chlam_PMP: domain 63 of 83, from 2690 to 2709: score 5.9, E = 2.6
*->ditFsgNsa.aggGGAiyas<-*
+ s+N+a +g+GG+i++
gi|1503848 2690 SGRVSDNTAaGGSGGGIWSA 2709
Viral_DNA_bp: domain 1 of 1, from 2712 to 2739: score -2.3, E = 9.6
CS ----HHHHHHTT--------XXXXXXXXXXX
*->WSlealrevleeneekvtagaggevfdFsav<-*
+Sl+a +v+++ ++ +g+gg+++++++
gi|1503848 2712 FSLDANFSVARNSAA---KGNGGGIYATGSS 2739
Chlam_PMP: domain 64 of 83, from 2717 to 2736: score 7.7, E = 0.86
*->ditFsgNsa.aggGGAiyas<-*
+ + Nsa g+GG+iya+
gi|1503848 2717 NFSVARNSAaKGNGGGIYAT 2736
Bse634I: domain 1 of 1, from 2777 to 2790: score 0.1, E = 7.1
CS HHHHHHCTBB.-GGG
*->kADvvaleTAiAtHg<-*
+++v+ + TA AtHg
gi|1503848 2777 NNAVISYNTA-ATHG 2790
Chlam_PMP: domain 65 of 83, from 2778 to 2796: score 9.1, E = 0.35
*->ditFsgNsaaggGGAiyas<-*
+ ++s N+aa +GG++ya
gi|1503848 2778 NAVISYNTAATHGGGLYAD 2796
Chlam_PMP: domain 66 of 83, from 2804 to 2823: score 6.7, E = 1.5
*->ditFsgNsa.aggGGAiyas<-*
+ ++ +N+a++g+GG+i++
gi|1503848 2804 SGSIHHNTAtSGNGGGIWTA 2823
Chlam_PMP: domain 67 of 83, from 2831 to 2850: score 5.7, E = 2.9
*->ditFsgNsa.aggGGAiyas<-*
+++ N+a++++GG+iya+
gi|1503848 2831 GVSVYLNTAsNSSGGGIYAT 2850
Chlam_PMP: domain 68 of 83, from 2892 to 2910: score 10.3, E = 0.17
*->ditFsgNsaaggGGAiyas<-*
+ t+s N+a+++GG+i+a
gi|1503848 2892 GATISYNTATNRGGGIFAD 2910
Trypan_glycop: domain 1 of 1, from 2904 to 2925: score 2.5, E = 3.1
CS SC-SSSSSS.S-EEECCCTEEE
*->glvttaatldaalpllgGylti<-*
g++++a+++d++++++gG + +
gi|1503848 2904 GGGIFADNADSTVTVAGGFIDR 2925
Reg_prop: domain 3 of 3, from 2917 to 2941: score 0.8, E = 76
*->slpgg.vtf.alledsdG.rlWigt.n<-*
+++gg + +++ ++ +G+ +++g++
gi|1503848 2917 TVAGGfIDRnSAAY--QGgGIYVGNgA 2941
Chlam_PMP: domain 69 of 83, from 2920 to 2938: score 8.5, E = 0.52
*->ditFsgNsaaggGGAiyas<-*
+ ++ Nsaa++GG+iy
gi|1503848 2920 GGFIDRNSAAYQGGGIYVG 2938
Peptidase_S6: domain 1 of 1, from 2933 to 2956: score -0.8, E = 6.8
*->gGiaagdgnvsvtlkahslftlsgs<-*
gGi g+g+ v l++ s+ ++s+s
gi|1503848 2933 GGIYVGNGA-EVNLTDTSVSHNSVS 2956
Chlam_PMP: domain 70 of 83, from 2947 to 2968: score 5.2, E = 4.1
*->ditFsgNsa...aggGGAiyas<-*
d++ s+Ns++++++gGG+i
gi|1503848 2947 DTSVSHNSVsgsTSGGGGIIVA 2968
Chlam_PMP: domain 71 of 83, from 2980 to 3003: score 2.6, E = 21
*->FsgNsa........aggGGAiyas<-*
++gN++ ++ +++ gGGA++ +
gi|1503848 2980 IDGNTVantagstaETGGGALLLK 3003
Chlam_PMP: domain 72 of 83, from 3012 to 3029: score 6.8, E = 1.5
*->ditFsgNsaaggGGAiyas<-*
++t+s+N a ++G Ai +
gi|1503848 3012 TTTLSNNVA-NNGSAIKTY 3029
Transposase_17: domain 1 of 1, from 3032 to 3043: score 2.3, E = 4.4
*->vdTvGeantetI<-*
v+TvG+++ + I
gi|1503848 3032 VLTVGGNTGDHI 3043
PEP-utilizers: domain 1 of 1, from 3038 to 3050: score 2.0, E = 7.4
CS STTEEEEE.CTSEE
*->kdGdiitvCDGstG<-*
++Gd i++ DG t+
gi|1503848 3038 NTGDHIVI-DGNTN 3050
Chlam_PMP: domain 73 of 83, from 3042 to 3063: score 6.1, E = 2.2
*->ditFsgNsa...aggGGAiyas<-*
i+++gN+ ++++ +G+A++ +
gi|1503848 3042 HIVIDGNTNgggHQWGAALLLE 3063
Chlam_PMP: domain 74 of 83, from 3071 to 3092: score 4.4, E = 6.7
*->ditFsgNsa...aggGGAiyas<-*
d ++s+N ++ +g GG+i+
gi|1503848 3071 DAEISNNVNshaSGMGGGILVG 3092
CaMKII_AD: domain 1 of 1, from 3077 to 3086: score 1.9, E = 6.3
*->iVHvHrSaap<-*
+V++H S+++
gi|1503848 3077 NVNSHASGMG 3086
Chlam_PMP: domain 75 of 83, from 3102 to 3119: score 6.2, E = 2.2
*->ditFsgNsaaggGGAiyas<-*
d+ + +N+a +gGG+iy +
gi|1503848 3102 DTKIHHNTA-AGGGGIYIN 3119
Chlam_PMP: domain 76 of 83, from 3123 to 3153: score 2.7, E = 20
*->ditFsgNsa............aggGGAiyas<-*
+++F +N ++ + ++++ g+GG+i +
gi|1503848 3123 NLSFGDNVKiysnvakannnsQGRGGGININ 3153
Hexapep: domain 2 of 2, from 3123 to 3136: score 0.9, E = 49
CS TEEECTTEEEETTE
*->gviIGdnvvIgpgv<-*
+ Gdnv+I ++v
gi|1503848 3123 NLSFGDNVKIYSNV 3136
Chlam_PMP: domain 77 of 83, from 3165 to 3191: score 6.7, E = 1.6
*->ditFsgNsa........aggGGAiyas<-*
++++ +N ++ + +++++ gGG+iy
gi|1503848 3165 GLEIYDNVSeatltdgdPIGGGGIYVL 3191
Alpha-amylase_C: domain 1 of 1, from 3199 to 3236: score 1.2, E = 7.8
CS STTSEEETCST .S.ESESS.E.EEE.BS..T.TTE.SSB..E-EEE
*->nsDaeeyGGsg.lgnsgctGktvvtVteeepwvdGrkpySwglntlt
ns a yG ++ +n+g+ v+ + ++S +t
gi|1503848 3199 NSEASIYG--NsAINGGG-----VF-----AC-----RNS----VVT 3224
CS ESTTEEEEEEEEEB
lPplsalvlhlkak<-*
l +++l+++ a+
gi|1503848 3225 L--DGVLIYQNSAV 3236
Chlam_PMP: domain 78 of 83, from 3201 to 3219: score 4.5, E = 6.2
*->ditFsgNsaaggGGAiyas<-*
+ ++ gNsa +gGG++ ++
gi|1503848 3201 EASIYGNSAINGGGVFACR 3219
Chlam_PMP: domain 79 of 83, from 3227 to 3244: score 6.7, E = 1.6
*->ditFsgNsaaggGGAiyas<-*
++ + Nsa ++GG+++ +
gi|1503848 3227 GVLIYQNSA-VDGGGVFVN 3244
Chlam_PMP: domain 80 of 83, from 3263 to 3281: score 0.5, E = 77
*->ditFsgNsaaggGGAiyas<-*
++ + +N+a+++G+++y
gi|1503848 3263 ETKIYENTASNHGAGLYVH 3281
Peptidase_M17: domain 1 of 1, from 3270 to 3294: score 0.1, E = 7.9
CS TSEE-ST....T-EE--TTHHHHHH
*->tAwnkkagqylpkGAtGvgVRTLve<-*
tA+n +ag y ++ +Gvg++T++
gi|1503848 3270 TASNHGAGLYVHANTVGVGTATITG 3294
Mitofilin: domain 1 of 1, from 3278 to 3290: score -0.0, E = 2.4
*->LtAyAsavGigtt<-*
L +A+ vG+gt
gi|1503848 3278 LYVHANTVGVGTA 3290
Chlam_PMP: domain 81 of 83, from 3295 to 3313: score 13.7, E = 0.019
*->ditFsgNsaaggGGAiyas<-*
d+ + +N a+g+GG+iy s
gi|1503848 3295 DVQIYDNVASGSGGGIYVS 3313
Elong-fact-P_C: domain 1 of 1, from 3316 to 3335: score 5.6, E = 1.1
CS EEEEEEE--SSS--SSSSTT
*->VeLeVveTePgvKGdTasgg<-*
+L+V T+ +v+G++a +g
gi|1503848 3316 AVLTVDGTDTAVRGNSAANG 3335
Chlam_PMP: domain 82 of 83, from 3324 to 3341: score 7.9, E = 0.74
*->ditFsgNsaaggGGAiyas<-*
d+ gNsa ++GG+++ s
gi|1503848 3324 DTAVRGNSA-ANGGGLHIS 3341
Chlam_PMP: domain 83 of 83, from 3350 to 3369: score 12.0, E = 0.055
*->ditFsgNsa.aggGGAiyas<-*
++++ gN+a++g+GG+i++
gi|1503848 3350 TVSIAGNTAtTGDGGGIWTA 3369
//