hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 150389334.fa
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Query sequence: gi|150389334|ref|YP_001319383.1|
Accession: [none]
Description: cell wall/surface repeat-containing protein [Alkaliphilus metalliredigens QYMF]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
SLH S-layer homology domain 118.3 5.1e-34 3
Flg_new Listeria-Bacteroides repeat domain (L 74.3 4.6e-19 2
Cadherin Cadherin domain 37.3 5.5e-10 1
PKD PKD domain 14.8 0.00051 1
DUF2141 Uncharacterized protein conserved in 10.2 0.022 2
mRNA_triPase mRNA capping enzyme, beta chain 6.9 0.053 1
UPF0182 Uncharacterised protein family (UPF01 6.4 0.054 2
PepSY Peptidase propeptide and YPEB domain 9.5 0.11 2
BNR BNR/Asp-box repeat 9.6 0.14 2
He_PIG Putative Ig domain 8.3 0.15 2
HYR HYR domain 7.3 0.15 1
Fasciclin Fasciclin domain 6.5 0.16 1
Big_2 Bacterial Ig-like domain (group 2) 7.6 0.16 2
SWIRM SWIRM domain 6.1 0.5 1
BetaGal_dom2 Beta-galactosidase, domain 2 5.0 0.54 1
DUF1132 Protein of unknown function (DUF1132) 3.3 0.8 1
DUF291 Domain of unknown function 6.1 0.85 2
I-set Immunoglobulin I-set domain 5.2 0.87 2
CBM_21 Putative phosphatase regulatory subun 4.9 0.96 1
DUF830 Orthopoxvirus protein of unknown func 4.4 0.96 1
Glyco_hydro_43 Glycosyl hydrolases family 43 1.5 0.98 1
Enolase_N Enolase, N-terminal domain 3.8 1 1
SKIP_SNW SKIP/SNW domain 3.4 1.2 2
MraZ MraZ protein 4.8 1.2 1
SPOUT_MTase Predicted SPOUT methyltransferase 1.4 1.4 1
MORN_2 MORN repeat variant 6.3 1.5 1
DUF1914 Domain of unknown function (DUF1914) 4.1 1.5 1
POTRA_2 POTRA domain, ShlB-type 3.8 1.6 1
Pox_C4_C10 Poxvirus C4/C10 protein 1.5 1.9 1
PRF Plethodontid receptivity factor PRF 0.6 2.2 1
Adeno_Penton_B Adenovirus penton base protein -0.4 2.4 1
B12-binding B12 binding domain 3.1 2.4 1
HAP3 Putative flagellar hook-associated pr 1.6 2.5 1
Peptidase_S32 Equine arteritis virus serine endopep 0.5 2.8 1
Osmo_MPGsynth Mannosyl-3-phosphoglycerate synthase 1.8 3.1 1
Stathmin Stathmin family 1.9 3.2 1
NPCBM_assoc NPCBM-associated, NEW3 domain of alph 3.4 3.2 2
TRAUB TRAUB (NUC102) domain 2.4 3.7 1
Transposase_27 IS1 transposase 2.9 3.8 1
Dicty_CAD Cell-cell adhesion domain 1.0 3.9 1
APG17 Autophagy protein Apg17 0.0 4.1 1
Phage_Gp9 Phage protein Gp9 1.4 4.3 1
Ldl_recept_b Low-density lipoprotein receptor repe 3.2 4.4 1
Phytoreo_P8 Phytoreovirus outer capsid protein P8 0.3 4.4 1
Flagellin_C Bacterial flagellin C-terminus 3.2 4.7 1
GD_AH_C D-galactarate dehydratase / Altronate 0.4 4.8 1
Phage_tail_T Minor tail protein T 0.9 4.8 1
VWA_N VWA N-terminal 1.1 4.9 1
Lyase_8_C Polysaccharide lyase family 8, C-term 2.2 5.4 1
TAF4 Transcription initiation factor TFIID 1.1 5.4 1
GSH_synthase Eukaryotic glutathione synthase 1.8 5.7 1
5_nucleotid_C 5'-nucleotidase, C-terminal domain 1.1 5.7 1
DUF373 Domain of unknown function (DUF373) -0.5 5.7 1
DUF1954 Domain of unknown function (DUF1954) 1.3 6 1
CbiK Cobalt chelatase (CbiK) 0.9 6.1 1
Mab-21 Mab-21 protein 0.1 6.1 1
BCSC_C Cellulose synthase operon protein C C 0.3 6.4 1
CBM_4_9 Carbohydrate binding domain 1.3 6.4 1
DUF1902 Domain of unknown function (DUF1902) 1.8 6.5 1
ECM1 Extracellular matrix protein 1 (ECM1) -1.1 6.6 1
SERTA SERTA motif 3.0 6.7 1
FMC1 FMC1 protein family -0.1 6.8 1
Pollen_allerg_1 Pollen allergen 1.7 6.9 1
MucBP MucBP domain 2.3 6.9 1
Sec61_beta Sec61beta family 2.9 7 1
E3_binding e3 binding domain 3.6 7.1 1
ADAM_spacer1 ADAM-TS Spacer 1 2.2 7.2 1
Pectate_lyase Pectate lyase 0.1 7.5 1
FAIM1 Fas apoptotic inhibitory molecule (FA -0.1 7.5 1
Glyco_hydro_76 Glycosyl hydrolase family 76 -0.3 7.6 1
DUF2503 Protein of unknown function (DUF2503) 1.2 7.7 1
DUF1293 Protein of unknown function (DUF1293) -0.2 8.3 1
DapB_N Dihydrodipicolinate reductase, N-term 0.4 8.4 1
DUF416 Protein of unknown function, DUF 0.9 8.6 1
DHQ_synthase 3-dehydroquinate synthase -0.0 8.9 1
PQQ PQQ enzyme repeat 2.3 8.9 2
CBM_20 Starch binding domain 1.5 9.1 1
DUF1332 Protein of unknown function (DUF1332) 1.3 9.1 1
DUF1023 Alpha/beta hydrolase of unknown funct 0.4 9.6 1
Mad3_BUB1_I Mad3/BUB1 homology region 1 1.3 9.7 1
phage_tail_N Prophage tail fibre N-terminal 1.9 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
UPF0182 1/2 1 25 [. 1 25 [. 4.7 0.16
ADAM_spacer1 1/1 2 10 .. 118 126 .] 2.2 7.2
DUF2141 1/2 19 40 .. 94 115 .] 3.5 2.1
DHQ_synthase 1/1 38 75 .. 22 64 .. -0.0 8.9
PepSY 1/2 49 123 .. 1 68 [] 5.1 1.7
B12-binding 1/1 56 77 .. 119 141 .] 3.1 2.4
Pox_C4_C10 1/1 84 94 .. 1 11 [. 1.5 1.9
Adeno_Penton_B 1/1 104 110 .. 460 466 .] -0.4 2.4
Fasciclin 1/1 104 162 .. 70 135 .. 6.5 0.16
DUF1914 1/1 114 147 .. 99 137 .] 4.1 1.5
SERTA 1/1 114 125 .. 27 38 .] 3.0 6.7
E3_binding 1/1 152 160 .. 31 39 .] 3.6 7.1
MORN_2 1/1 170 191 .. 1 22 [] 6.3 1.5
POTRA_2 1/1 219 237 .. 1 19 [. 3.8 1.6
DUF1902 1/1 269 279 .. 1 12 [. 1.8 6.5
Peptidase_S32 1/1 320 340 .. 1 20 [. 0.5 2.8
BetaGal_dom2 1/1 331 352 .. 1 22 [. 5.0 0.54
DUF830 1/1 345 358 .. 1 14 [. 4.4 0.96
Cadherin 1/1 387 450 .. 31 107 .] 37.3 5.5e-10
PepSY 2/2 389 414 .. 45 68 .] 4.3 2.7
5_nucleotid_C 1/1 392 415 .. 46 69 .. 1.1 5.7
PQQ 1/2 401 410 .. 13 22 .. 0.4 32
He_PIG 1/2 403 437 .. 30 61 .] 2.8 5.2
Lyase_8_C 1/1 404 450 .. 35 90 .] 2.2 5.4
PKD 1/1 419 449 .. 59 92 .] 14.8 0.00051
HYR 1/1 424 449 .. 61 86 .] 7.3 0.15
I-set 1/2 424 447 .. 73 96 .] 4.7 1.3
DUF291 1/2 436 447 .. 82 92 .] 0.2 34
CbiK 1/1 497 504 .. 1 8 [. 0.9 6.1
GSH_synthase 1/1 527 544 .. 48 69 .. 1.8 5.7
FAIM1 1/1 534 546 .. 191 203 .] -0.1 7.5
CBM_21 1/1 556 583 .. 42 72 .. 4.9 0.96
CBM_20 1/1 566 580 .. 1 19 [. 1.5 9.1
Pollen_allerg_1 1/1 574 584 .. 1 11 [. 1.7 6.9
Enolase_N 1/1 580 615 .. 98 133 .] 3.8 1
GD_AH_C 1/1 601 613 .. 175 187 .. 0.4 4.8
MucBP 1/1 620 641 .. 70 108 .] 2.3 6.9
phage_tail_N 1/1 629 643 .. 1 18 [. 1.9 9.8
DUF2141 2/2 651 667 .. 1 17 [. 6.6 0.25
Big_2 1/2 750 768 .. 72 90 .] 0.2 22
Ldl_recept_b 1/1 808 817 .. 38 47 .] 3.2 4.4
Sec61_beta 1/1 849 864 .. 1 16 [. 2.9 7
DUF1954 1/1 853 863 .. 1 11 [. 1.3 6
DUF2503 1/1 875 885 .. 1 11 [. 1.2 7.7
SPOUT_MTase 1/1 879 887 .. 156 164 .] 1.4 1.4
Dicty_CAD 1/1 902 912 .. 1 11 [. 1.0 3.9
MraZ 1/1 947 960 .. 1 14 [. 4.8 1.2
Flagellin_C 1/1 965 980 .. 1 16 [. 3.2 4.7
HAP3 1/1 980 1009 .. 96 127 .. 1.6 2.5
FMC1 1/1 998 1030 .. 1 31 [. -0.1 6.8
DUF373 1/1 1001 1019 .. 371 391 .] -0.5 5.7
TRAUB 1/1 1014 1021 .. 1 8 [. 2.4 3.7
DUF1023 1/1 1101 1114 .. 1 14 [. 0.4 9.6
DUF1293 1/1 1101 1110 .. 90 99 .. -0.2 8.3
SKIP_SNW 1/2 1142 1156 .. 1 15 [. 2.3 2.7
BCSC_C 1/1 1144 1152 .. 344 352 .] 0.3 6.4
Phage_tail_T 1/1 1145 1154 .. 94 103 .] 0.9 4.8
NPCBM_assoc 1/2 1169 1198 .. 52 86 .] 3.2 3.5
I-set 2/2 1190 1197 .. 89 96 .] 0.5 20
DUF416 1/1 1225 1240 .. 98 112 .] 0.9 8.6
PQQ 2/2 1245 1270 .. 13 37 .] 1.9 12
BNR 1/2 1257 1268 .. 1 12 [] 7.3 0.7
NPCBM_assoc 2/2 1310 1339 .. 52 86 .] 0.2 27
DapB_N 1/1 1342 1352 .. 120 130 .] 0.4 8.4
BNR 2/2 1399 1410 .. 1 12 [] 2.3 23
SKIP_SNW 2/2 1425 1432 .. 1 8 [. 1.1 5.6
Pectate_lyase 1/1 1467 1500 .. 1 35 [. 0.1 7.5
He_PIG 2/2 1486 1525 .. 1 61 [] 5.4 0.94
Big_2 2/2 1547 1568 .. 68 90 .] 7.4 0.18
Glyco_hydro_43 1/1 1556 1577 .. 227 257 .. 1.5 0.98
DUF291 2/2 1559 1580 .. 69 92 .] 5.9 0.96
Flg_new 1/2 1616 1658 .. 3 43 .] 34.1 8.5e-08
Phytoreo_P8 1/1 1634 1645 .. 310 321 .. 0.3 4.4
CBM_4_9 1/1 1678 1702 .. 146 172 .] 1.3 6.4
DUF1132 1/1 1693 1704 .. 89 100 .] 3.3 0.8
PRF 1/1 1745 1760 .. 1 17 [. 0.6 2.2
Flg_new 2/2 1794 1837 .. 2 43 .] 40.2 2.2e-09
ECM1 1/1 1826 1860 .. 526 560 .] -1.1 6.6
TAF4 1/1 1832 1870 .. 250 289 .. 1.1 5.4
APG17 1/1 1897 1916 .. 204 224 .. 0.0 4.1
UPF0182 2/2 1954 1975 .. 535 556 .. 1.7 1.1
Osmo_MPGsynth 1/1 1964 1978 .. 406 420 .] 1.8 3.1
Phage_Gp9 1/1 1966 1992 .. 94 120 .] 1.4 4.3
DUF1332 1/1 1970 1989 .. 116 135 .] 1.3 9.1
mRNA_triPase 1/1 1978 1991 .. 264 277 .] 6.9 0.053
Stathmin 1/1 1997 2029 .. 1 33 [. 1.9 3.2
Mad3_BUB1_I 1/1 2000 2009 .. 126 135 .] 1.3 9.7
Mab-21 1/1 2008 2025 .. 62 78 .. 0.1 6.1
VWA_N 1/1 2026 2048 .. 1 24 [. 1.1 4.9
SLH 1/3 2108 2148 .. 1 44 [] 27.1 4.6e-07
SLH 2/3 2167 2210 .. 1 44 [] 59.9 9.4e-17
Glyco_hydro_76 1/1 2216 2227 .. 1 12 [. -0.3 7.6
SLH 3/3 2232 2276 .. 1 44 [] 31.4 2.4e-08
Transposase_27 1/1 2243 2264 .. 26 47 .. 2.9 3.8
SWIRM 1/1 2273 2291 .] 77 95 .] 6.1 0.5
Alignments of top-scoring domains:
UPF0182: domain 1 of 2, from 1 to 25: score 4.7, E = 0.16
*->rRarvlivtalgvLavllvgfprli<-*
+R + +++al+ L v+ g+p+++
gi|1503893 1 MRLKYEYMIALIILIVICLGMPVFA 25
ADAM_spacer1: domain 1 of 1, from 2 to 10: score 2.2, E = 7.2
*->glkYeYtiP<-*
+lkYeY+i
gi|1503893 2 RLKYEYMIA 10
DUF2141: domain 1 of 2, from 19 to 40: score 3.5, E = 2.1
*->fGPPsFsdAaFtldggdttitI<-*
+G P F A++ l+g++t++ I
gi|1503893 19 LGMPVFATASVGLEGESTEVAI 40
DHQ_synthase: domain 1 of 1, from 38 to 75: score -0.0, E = 8.9
CS EEEEEEHHHHHHHHHHHHHHHHHCT-EEEEEEE-SSGGGSSHH
*->vvivtdetvaklygekveeaLkaaGfevevivipdGEtsKtle<-*
v+iv d+ v+++ + ++e+ k+aG ev +i +GE +K+l+
gi|1503893 38 VAIV-DTSVQDY--KILVESAKNAGLEVILI--GEGEGVKDLA 75
PepSY: domain 1 of 2, from 49 to 123: score 5.1, E = 1.7
*->kisleeAlaiaka.f.aypgeviksielddedkkdealglg...gtv
ki +e A+++ ++ + ++ge +k++ ++ e++ ++++ + ++g v
gi|1503893 49 KILVESAKNAGLEvIlIGEGEGVKDLAEALEGRSNIDALHIfshGDV 95
vyvvv.dddg.rlevyvDaytGevlgve<-*
v+ ++d ++ ++ v a+t + +g+
gi|1503893 96 GQVFLgGDVLsSETLEVHANTLARIGAS 123
B12-binding: domain 1 of 1, from 56 to 77: score 3.1, E = 2.4
CS CCCHCCEE-TTSSCCCHCCCHHH
*->eeggaDavvvGegeetvkalvea<-*
+++g +++ +Geg e vk+l+ea
gi|1503893 56 KNAGLEVILIGEG-EGVKDLAEA 77
Pox_C4_C10: domain 1 of 1, from 84 to 94: score 1.5, E = 1.9
*->lltikiFndde<-*
+++++iF++++
gi|1503893 84 IDALHIFSHGD 94
Adeno_Penton_B: domain 1 of 1, from 104 to 110: score -0.4, E = 2.4
*->VLSSaTL<-*
VLSS TL
gi|1503893 104 VLSSETL 110
Fasciclin: domain 1 of 1, from 104 to 162: score 6.5, E = 0.16
CS EEECSS..HHHHHHHHCSCCCCSEEBCTTSS EEEEEECECCCEE-E
*->vvpggvyslkrslsssdLkngsnvtttlqGs.lrvnvslngggegfv
v+++ + ++ +++L + t G l + + + g +g v
gi|1503893 104 VLSSE----TLEVHANTLARIGASMT-ATGHiLLYGCNVAQGEVGSV 145
CS EEEETTEEEEEEEEEEEESS
vvndgvnnArvvqaDieatN<-*
++ d +Ar++qaD++a+N
gi|1503893 146 FIED---MARITQADVAASN 162
DUF1914: domain 1 of 1, from 114 to 147: score 4.1, E = 1.5
*->agtgnsfhidispdGsfrwWGeniakgsvatrGnasyFI<-*
a+t+++ +++ G + + G n+a+g v +s+FI
gi|1503893 114 ANTLARIGASMTATGHILLYGCNVAQGEV-----GSVFI 147
SERTA: domain 1 of 1, from 114 to 125: score 3.0, E = 6.7
*->nNTLrRIqeEle<-*
+NTL RI ++++
gi|1503893 114 ANTLARIGASMT 125
E3_binding: domain 1 of 1, from 152 to 160: score 3.6, E = 7.1
CS BBHHHHHHH
*->RItkeDVea<-*
RIt +DV a
gi|1503893 152 RITQADVAA 160
MORN_2: domain 1 of 1, from 170 to 191: score 6.3, E = 1.5
*->keGeekfyyenGklkeeieykn<-*
++G + ++G +k e+ +++
gi|1503893 170 LGGDWVLEEATGEIKAEGLFVD 191
POTRA_2: domain 1 of 1, from 219 to 237: score 3.8, E = 1.6
*->fpikrieleGntllppael<-*
+ i++i++ Gn ++ e+
gi|1503893 219 VAISGIYVAGNGSFSSGEI 237
DUF1902: domain 1 of 1, from 269 to 279: score 1.8, E = 6.5
CS EEEEEEEETTTT
*->lkvqavWDaEAG<-*
+v ++WD+ AG
gi|1503893 269 -TVTVTWDNTAG 279
Peptidase_S32: domain 1 of 1, from 320 to 340: score 0.5, E = 2.8
CS EEEEECTTEEEEEEEH HHH-
*->GGVFTingnvvVvTAs.HVlg<-*
G + i ++ vV+TA++HV++
gi|1503893 320 GALNGITNRNVVITATdHVVN 340
BetaGal_dom2: domain 1 of 1, from 331 to 352: score 5.0, E = 0.54
CS HCTSEE---BSSSSBS-TTEEE
*->yLtaTprngngtvYtsnsdlrV<-*
++taT+++ n t+ ++n++++V
gi|1503893 331 VITATDHVVNVTTVADNANVIV 352
DUF830: domain 1 of 1, from 345 to 358: score 4.4, E = 0.96
*->MDpltFIkdYvPkG<-*
+D++++I+d+v++G
gi|1503893 345 ADNANVIVDNVAPG 358
Cadherin: domain 1 of 1, from 387 to 450: score 37.3, E = 5.5e-10
CS T----------SS----B-TTSSEEE..E---S- --S.....S-B
*->grirYsilggnpggwFrIdpdtGdnegiisttkp..LDREeifngeY
g ++Ys+++++ gg F+Id +tG+ i+++ +++ + + + +
gi|1503893 387 GAVTYSLVNNG-GGRFAIDAATGE----ITVADAgsIVYAHN--DSH 426
CS --EEE----.........S---EEEE--EEE-
eLtveAtDadpllasgggpplsstatvtitVl<-*
++tv+A+Da+ ++++ +++t+tV+
gi|1503893 427 SITVVASDAA--------GNMTADTVLTVTVT 450
PepSY: domain 2 of 2, from 389 to 414: score 4.3, E = 2.7
*->vvv.dddg.rlevyvDaytGevlgve<-*
v ++ ++++ ++ +Da tGe++ ++
gi|1503893 389 VTYsLVNNgGGRFAIDAATGEITVAD 414
5_nucleotid_C: domain 1 of 1, from 392 to 415: score 1.1, E = 5.7
*->allngGgiRapidrpaGdITygdi<-*
+l+n+Gg R +id+ G+IT++d+
gi|1503893 392 SLVNNGGGRFAIDAATGEITVADA 415
PQQ: domain 1 of 2, from 401 to 410: score 0.4, E = 32
CS EEEETTTTSE
*->yAlDakTGkv<-*
+A+Da+TG++
gi|1503893 401 FAIDAATGEI 410
He_PIG: domain 1 of 2, from 403 to 437: score 2.8, E = 5.2
*->LdsstGritGt....PtptvqpGsytftvtatdgsg<-*
+d++tG it+ + +++ ++ + s ++tv a+d++g
gi|1503893 403 IDAATGEITVAdagsIVYA-HNDSHSITVVASDAAG 437
Lyase_8_C: domain 1 of 1, from 404 to 450: score 2.2, E = 5.4
CS . EETTEEESSSEEEEEEEETTCEEEEEEE-T TS--SEEEEE..
*->d.taggitvnkpasvlikeegdgtytvsvsdP...tqtnssltivwN
d +g+itv +++s+++ ++++ ++tv++sd +++++ + lt
gi|1503893 404 DaATGEITVADAGSIVYAHNDSHSITVVASDAagnMTADTVLT---- 446
CS ..E.......EES
kPvgkvvKddeli<-*
v +++
gi|1503893 447 --V-------TVT 450
PKD: domain 1 of 1, from 419 to 449: score 14.8, E = 0.00051
CS EESS....SEEEEEEEEEEETTCEEEEEE EEEEE
*->tYskgsVtpGtYtVtLtvsngvgsasatt.ttvtV<-*
+Y + ++++t+++s+++g+ +a t +tvtV
gi|1503893 419 VYAH----NDSHSITVVASDAAGNMTADTvLTVTV 449
HYR: domain 1 of 1, from 424 to 449: score 7.3, E = 0.15
*->EettVtYtatDnaGN.eAdsCtFtVtV<-*
+++++t +a+D+aGN +A ++tVtV
gi|1503893 424 DSHSITVVASDAAGNmTA-DTVLTVTV 449
I-set: domain 1 of 2, from 424 to 447: score 4.7, E = 1.3
CS GGCEEEEEEEETTEEEEEEEEEEE
*->DeGkYtCvAtNsaGeaeasaeLtV<-*
D+++ t+vA+ aG +a+ LtV
gi|1503893 424 DSHSITVVASDAAGNMTADTVLTV 447
DUF291: domain 1 of 2, from 436 to 447: score 0.2, E = 34
*->aGa.TadpvLtv<-*
aG+ Tad vLtv
gi|1503893 436 AGNmTADTVLTV 447
CbiK: domain 1 of 1, from 497 to 504: score 0.9, E = 6.1
CS EEEEEEE-
*->KAILvVsF<-*
+A+L+VsF
gi|1503893 497 EATLIVSF 504
GSH_synthase: domain 1 of 1, from 527 to 544: score 1.8, E = 5.7
CS EEE-TTT--EEETTT..--EEE
*->gsldddtrkLfidgsFteqeVA<-*
++ld + kL +dg qe+A
gi|1503893 527 LTLDNNDHKLLMDG----QEIA 544
FAIM1: domain 1 of 1, from 534 to 546: score -0.1, E = 7.5
*->HtLlvdGvkipea<-*
H+Ll dG +i
gi|1503893 534 HKLLMDGQEIATI 546
CBM_21: domain 1 of 1, from 556 to 583: score 4.9, E = 0.96
*->yTfDnWkthsDvpAtYvEvlsgd.kpksgdgd<-*
+Tf++W+t + v+A+++ +++ ++g ++
gi|1503893 556 ITFNHWATATQVNAVFN----HItFTVYGNDN 583
CBM_20: domain 1 of 1, from 566 to 580: score 1.5, E = 9.1
CS EEEEEEEEES--..---TT
*->qVsVtFnvnnapkytTqyG<-*
qV+++Fn + T+yG
gi|1503893 566 QVNAVFNH-IT---FTVYG 580
Pollen_allerg_1: domain 1 of 1, from 574 to 584: score 1.7, E = 6.9
CS EEEEE-TT-BT
*->vrFtvnggsnp<-*
++Ftv g++np
gi|1503893 574 ITFTVYGNDNP 584
Enolase_N: domain 1 of 1, from 580 to 615: score 3.8, E = 1
CS STTSTTT-HHHHHHHHHHHHHHHHHHHTS-HHHHHH
*->GtenKsklGAnAiLgvslAvakAaAaekkvPLYkhi<-*
G +n +++GAnA +vs A+ PL +
gi|1503893 580 GNDNPTNFGANATRAVSAVFQDAGSGLTSNPLTGTL 615
GD_AH_C: domain 1 of 1, from 601 to 613: score 0.4, E = 4.8
*->DGfSGiTANPavG<-*
D+ SG+T+NP++G
gi|1503893 601 DAGSGLTSNPLTG 613
MucBP: domain 1 of 1, from 620 to 641: score 2.3, E = 6.9
*->YadktkvagitVvgqvTptlkdtlpvnvtYtfngtiqtV<-*
Y +++++l++++++tf++ + t
gi|1503893 620 Y-----------------NDPEILNGTISGTFTEGTGTP 641
phage_tail_N: domain 1 of 1, from 629 to 643: score 1.9, E = 9.8
*->MsVkISGvLkdGtGePVs<-*
+ISG+ + GtG+P +
gi|1503893 629 ---TISGTFTEGTGTPLQ 643
DUF2141: domain 2 of 2, from 651 to 667: score 6.6, E = 0.25
*->VtveGlrsakGqllval<-*
++v+++ ++G l+v+l
gi|1503893 651 IQVDNINFDNGSLMVSL 667
Big_2: domain 1 of 2, from 750 to 768: score 0.2, E = 22
CS -EEEEEEETT.TEEEEEEE
*->tatItatsgdgnksasvtv<-*
++tI+ + g g+++a+ t
gi|1503893 750 SVTISLDDGAGGTTATSTL 768
Ldl_recept_b: domain 1 of 1, from 808 to 817: score 3.2, E = 4.4
CS -EEEEEEETT
*->hPngIavDpi<-*
+P++I++D+
gi|1503893 808 APEAIVIDWD 817
Sec61_beta: domain 1 of 1, from 849 to 864: score 2.9, E = 7
*->ggssagllrfYtddap<-*
+s+agl +Yt++++
gi|1503893 849 AASGAGLYAYYTEESG 864
DUF1954: domain 1 of 1, from 853 to 863: score 1.3, E = 6
*->kdLkrYYsgpS<-*
L++YY+++S
gi|1503893 853 AGLYAYYTEES 863
DUF2503: domain 1 of 1, from 875 to 885: score 1.2, E = 7.7
*->siidlgLRavq<-*
++++++LR++q
gi|1503893 875 DVYQTILRGIQ 885
SPOUT_MTase: domain 1 of 1, from 879 to 887: score 1.4, E = 1.4
CS HHHCT----
*->tIlrghPYH<-*
tIlrg YH
gi|1503893 879 TILRGIQYH 887
Dicty_CAD: domain 1 of 1, from 902 to 912: score 1.0, E = 3.9
*->itLvnEDGEst<-*
it+v DGE t
gi|1503893 902 ITIVASDGEDT 912
MraZ: domain 1 of 1, from 947 to 960: score 4.8, E = 1.2
CS CCTTEEEEEB-TTS
*->mfagAteveLDskG<-*
m agAt veLD+++
gi|1503893 947 MAAGATIVELDGDN 960
Flagellin_C: domain 1 of 1, from 965 to 980: score 3.2, E = 4.7
*->akgaqaaldivDeAlt<-*
++ + +++d vDeA+t
gi|1503893 965 LITLTNPQDGVDEAIT 980
HAP3: domain 1 of 1, from 980 to 1009: score 1.6, E = 2.5
*->dLvtakssdnaaklvvskaEIssaLqsltSaL<-*
+L++ +s+d+a+ +++ + s++ lt+++
gi|1503893 980 TLAGRTSGDEANGITITYT--SNTVITLTGIA 1009
FMC1: domain 1 of 1, from 998 to 1030: score -0.1, E = 6.8
*->Msaat.k..ttsllslYRsLlRELpkrqaalstp<-*
s+++ + + +++s Y +LlREL + + a+s p
gi|1503893 998 TSNTViTltGIASASEYQALLRELQYAN-ASSGP 1030
DUF373: domain 1 of 1, from 1001 to 1019: score -0.5, E = 5.7
*->yviillslviiiavisralle<-*
+vi+l+++++++++ all+
gi|1503893 1001 TVITLTGIASASEYQ--ALLR 1019
TRAUB: domain 1 of 1, from 1014 to 1021: score 2.4, E = 3.7
*->YrqLLkeL<-*
Y+ LL+eL
gi|1503893 1014 YQALLREL 1021
DUF1023: domain 1 of 1, from 1101 to 1114: score 0.4, E = 9.6
*->DPrgkglaAevvGD<-*
DP + ++e+vG+
gi|1503893 1101 DPLEGIVITEAVGN 1114
DUF1293: domain 1 of 1, from 1101 to 1110: score -0.2, E = 8.3
*->DPLaGaivtE<-*
DPL+G+++tE
gi|1503893 1101 DPLEGIVITE 1110
SKIP_SNW: domain 1 of 2, from 1142 to 1156: score 2.3, E = 2.7
*->aqYirYtPSnQngan<-*
YirY P Qng++
gi|1503893 1142 TDYIRYVPDGQNGET 1156
BCSC_C: domain 1 of 1, from 1144 to 1152: score 0.3, E = 6.4
*->YlRYafdgq<-*
Y+RY dgq
gi|1503893 1144 YIRYVPDGQ 1152
Phage_tail_T: domain 1 of 1, from 1145 to 1154: score 0.9, E = 4.8
*->VRyGPDSepg<-*
+Ry PD++ g
gi|1503893 1145 IRYVPDGQNG 1154
NPCBM_assoc: domain 1 of 2, from 1169 to 1198: score 3.2, E = 3.5
*->atltatwkVtpPadAaAGdPYHPYtltasAsYtvs<-*
+t+ ++++Vt ++++ A++ t ta+A+ tv
gi|1503893 1169 GTVGTKVDVTNNGGTTAFS-----TNTATATLTVM 1198
I-set: domain 2 of 2, from 1190 to 1197: score 0.5, E = 20
CS EEEEEEEE
*->easaeLtV<-*
+a+a+LtV
gi|1503893 1190 TATATLTV 1197
DUF416: domain 1 of 1, from 1225 to 1240: score 0.9, E = 8.6
*->TVaafiE.aqageelt<-*
TV +fiE+a ++ ++
gi|1503893 1225 TVESFIEsAITDVDIG 1240
PQQ: domain 2 of 2, from 1245 to 1270: score 1.9, E = 12
CS EEEETTTTSEEEEEESSSGGGS GEE
*->yAlDakTGkvlWkfktggpvds.pvt<-*
+A+ a++G+ +W++ t+ + + +++
gi|1503893 1245 TAITATSGNGVWQYSTDVGATWiSIG 1270
BNR: domain 1 of 2, from 1257 to 1268: score 7.3, E = 0.7
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+yStD G+TW
gi|1503893 1257 QYSTDVGATWIS 1268
NPCBM_assoc: domain 2 of 2, from 1310 to 1339: score 0.2, E = 27
*->atltatwkVtpPadAaAGdPYHPYtltasAsYtvs<-*
+t+ ++++Vt ++++ A++ t ta+A+ v+
gi|1503893 1310 GTVGTKVDVTNNGGTTAFS-----TNTATATLIVT 1339
DapB_N: domain 1 of 1, from 1342 to 1352: score 0.4, E = 8.4
CS ..SEEEE-S--
*->agipiviApNf<-*
++ pi+i++N+
gi|1503893 1342 NDAPILISGNY 1352
BNR: domain 2 of 2, from 1399 to 1410: score 2.3, E = 23
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+yStDg TWs
gi|1503893 1399 QYSTDGFSTWSD 1410
SKIP_SNW: domain 2 of 2, from 1425 to 1432: score 1.1, E = 5.6
*->aqYirYtP<-*
+ YirY+P
gi|1503893 1425 SDYIRYIP 1432
Pectate_lyase: domain 1 of 1, from 1467 to 1500: score 0.1, E = 7.5
CS XXXXXXXXX....XXX--EEESS-EEE-TT-EEEE
*->assgvtptvPsteaaaaatvvhdtIeVkaGqvfDG<-*
a+s++ t+ s a a + ++I+++aG++++G
gi|1503893 1467 AFSTALATA-SINAVASTEKEITAITIPAGATIEG 1500
He_PIG: domain 2 of 2, from 1486 to 1525: score 5.4, E = 0.94
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
t+ ++P+G t+ t +i+ + + t
gi|1503893 1486 EITA-----------------ITIPAGATI-EGTNIIASVANAT--- 1511
Gsytftvtatdgsg<-*
s ++vt++ g++
gi|1503893 1512 SSVIVDVTVSPGAY 1525
Big_2: domain 2 of 2, from 1547 to 1568: score 7.4, E = 0.18
CS -SSS-EEEEEEETT.TEEEEEEE
*->lakGtatItatsgdgnksasvtv<-*
++++ta+I++t++d ++++++t
gi|1503893 1547 VGTNTAYIKVTAQD-GTTKTYTA 1568
Glyco_hydro_43: domain 1 of 1, from 1556 to 1577: score 1.5, E = 0.98
CS EEE..ES-SSTT....-EEEE...EEESSTT
*->taAgCegGTggpdqdiyavgvlvaaRSksil<-*
++A ++GT + y+++v R+++++
gi|1503893 1556 VTA--QDGTTKT----YTAVV---SRGANPT 1577
DUF291: domain 2 of 2, from 1559 to 1580: score 5.9, E = 0.96
*->plGttatLTFdFsaGaTadpvLtv<-*
++Gtt+t T + s+Ga +p+ tv
gi|1503893 1559 QDGTTKTYTAVVSRGA--NPTYTV 1580
Flg_new: domain 1 of 2, from 1616 to 1658: score 34.1, E = 8.5e-08
*->keGYtFaGWYtaetG.GtkydFsttvmp.tgdiTLYAkWtknt<-*
++GYt +GW+t ++G+Gt+y+ ++++++++++ TLYAkW + t
gi|1503893 1616 RTGYTLVGWNTQANGqGTSYYTGSSFTMgAENATLYAKWIDST 1658
Phytoreo_P8: domain 1 of 1, from 1634 to 1645: score 0.3, E = 4.4
CS HHHTTTS--.SS
*->sYYTLsSiTlqt<-*
sYYT+sS T+++
gi|1503893 1634 SYYTGSSFTMGA 1645
CBM_4_9: domain 1 of 1, from 1678 to 1702: score 1.3, E = 6.4
*->vlyvelggtepdsttdfyvDdvsltdv<-*
+++++l + ++ t+++y+Dd+ l dv
gi|1503893 1678 TFILNLSN--DTVTGSVYADDINLGDV 1702
DUF1132: domain 1 of 1, from 1693 to 1704: score 3.3, E = 0.8
*->ivDninfddvFe<-*
+ D in +dvF
gi|1503893 1693 YADDINLGDVFS 1704
PRF: domain 1 of 1, from 1745 to 1760: score 0.6, E = 2.2
*->RstsLLtFLvvsLstAt<-*
t L+ +vvsL tAt
gi|1503893 1745 -TTPLIAEVVVSLNTAT 1760
Flg_new: domain 2 of 2, from 1794 to 1837: score 40.2, E = 2.2e-09
*->TkeGYtFaGWYtaetG.Gtkyd.FsttvmptgdiTLYAkWtknt<-*
+k+GYtFaGW+t ++G+ t+y++ st +m t +i LYA Wtk++
gi|1503893 1794 VKTGYTFAGWNTQANGqETSYTqGSTLIMSTTNINLYAMWTKTS 1837
ECM1: domain 1 of 1, from 1826 to 1860: score -1.1, E = 6.6
*->nvAlvaGDtenAkGlGEqGptrGtnasptsepKEE<-*
n+ l a t+ G G G G n+ pt+ p
gi|1503893 1826 NINLYAMWTKTSSGGGSSGGSTGGNIRPTPTPEPA 1860
TAF4: domain 1 of 1, from 1832 to 1870: score 1.1, E = 5.4
*->dvepassggagsggktasssgsssfdgkqllrpkvirtIs<-*
+ ++ ssgg++sgg+t+++++++++++ + + +++ +I+
gi|1503893 1832 MWTKTSSGGGSSGGSTGGNIRPTPTPEPATE-TEEVVIIN 1870
APG17: domain 1 of 1, from 1897 to 1916: score 0.0, E = 4.1
*->elLkdkLkeVPvIkeQvenIk<-*
++L +k++eV + Q+e+I+
gi|1503893 1897 NVLSQKIDEV-ITLNQTEGIQ 1916
UPF0182: domain 2 of 2, from 1954 to 1975: score 1.7, E = 1.1
*->idGkyqdtliAaRELdpksLpg<-*
i+++++d++i +RE+d + + +
gi|1503893 1954 INTEKVDYVIPVREIDIEKVAD 1975
Osmo_MPGsynth: domain 1 of 1, from 1964 to 1978: score 1.8, E = 3.1
*->PikdiDlekFakile<-*
P+ +iD+ek+a+il
gi|1503893 1964 PVREIDIEKVADILN 1978
Phage_Gp9: domain 1 of 1, from 1966 to 1992: score 1.4, E = 4.3
*->KelvIvkViPaYeTdsktpyHlElevv<-*
+e I kV d+ +++ E+e++
gi|1503893 1966 REIDIEKVADILNVDPTSLHEIEIEIR 1992
DUF1332: domain 1 of 1, from 1970 to 1989: score 1.3, E = 9.1
*->iRRvAdLLgvshrdfiraRl<-*
i++vAd+L v++ ++++ +
gi|1503893 1970 IEKVADILNVDPTSLHEIEI 1989
mRNA_triPase: domain 1 of 1, from 1978 to 1991: score 6.9, E = 0.053
CS ----EEEEEEEEEE
*->ddkteekyEvEiEl<-*
+++ ++ +E+EiE+
gi|1503893 1978 NVDPTSLHEIEIEI 1991
Stathmin: domain 1 of 1, from 1997 to 2029: score 1.9, E = 3.2
CS X----B-----SSEEEEE--SS-----------
*->sDievkeleKrasGqaFEliLkPpskdsvpels<-*
++i+ e+ +r q E+i++P ++ v++ +
gi|1503893 1997 NEIKANEIIQRGRAQGIEVIMQPMEFEIVAKTT 2029
Mad3_BUB1_I: domain 1 of 1, from 2000 to 2009: score 1.3, E = 9.7
*->kAdevfqlGi<-*
kA+e++q+G+
gi|1503893 2000 KANEIIQRGR 2009
Mab-21: domain 1 of 1, from 2008 to 2025: score 0.1, E = 6.1
*->gRFeGleViS.PtEfEiV<-*
gR +G+eVi +P EfEiV
gi|1503893 2008 GRAQGIEVIMqPMEFEIV 2025
VWA_N: domain 1 of 1, from 2026 to 2048: score 1.1, E = 4.9
*->AEnvLqeahefnedlkannfqYYn<-*
A+ + ++ e++e+ +++++ Y++
gi|1503893 2026 AKTT-NNQGEEQETTVNQFTSYVS 2048
SLH: domain 1 of 3, from 2108 to 2148: score 27.1, E = 4.6e-07
*->sFsDvpkthWakdaInaLvklGiikGypdgtFrPdkniTRaEaA<-*
+ + v+ hW k+ +n +++ +ik +tF+P++ iTR+E+A
gi|1503893 2108 TVAAVEN-HWSKETVNDMASRLVIK--NPDTFKPNQLITRGEFA 2148
SLH: domain 2 of 3, from 2167 to 2210: score 59.9, E = 9.4e-17
*->sFsDvpkthWakdaInaLvklGiikGypdgtFrPdkniTRaEaA<-*
+FsDvp th +daI ++++ Gii+GypdgtF+Pd++i+R+Ea+
gi|1503893 2167 KFSDVPLTHELSDAITIATDYGIISGYPDGTFKPDAQISREEAM 2210
Glyco_hydro_76: domain 1 of 1, from 2216 to 2227: score -0.3, E = 7.6
*->dlDitdtsSidn<-*
+D++d+++idn
gi|1503893 2216 AMDVVDLQEIDN 2227
SLH: domain 3 of 3, from 2232 to 2276: score 31.4, E = 2.4e-08
*->sFsDvpkt.hWakdaInaLvklGiikGypdgtFrPdkniTRaEaA<-
++ D +++ +Wa++++++ v++G+++G ++ t +P+++ T aEaA
gi|1503893 2232 NYIDKDQIaTWAYESVKKTVSAGVFSGRTAETINPKDTFTYAEAA 2276
*
gi|1503893 - -
Transposase_27: domain 1 of 1, from 2243 to 2264: score 2.9, E = 3.8
*->AYdrkrktVlAyvFGeRTdeTl<-*
AY+ +ktV A vF RT eT+
gi|1503893 2243 AYESVKKTVSAGVFSGRTAETI 2264
SWIRM: domain 1 of 1, from 2273 to 2291: score 6.1, E = 0.5
*->vnlvsrvydFLerwGyINy<-*
+++++++++ L+r G+IN+
gi|1503893 2273 AEAATAIRNLLVRAGLIND 2291
//