hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 153971525.fa
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Query sequence: gi|153971525|ref|YP_001393065.1|
Accession: [none]
Description: RTX toxin RtxA [Vibrio vulnificus]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
RtxA RtxA repeat 762.7 1.4e-226 48
Abhydrolase_1 alpha/beta hydrolase fold 21.4 1e-05 1
HemolysinCabind Hemolysin-type calcium-binding repeat 21.8 1.9e-05 8
Peptidase_C58 Yersinia/Haemophilus virulence surfac 13.8 0.0019 2
Big_2 Bacterial Ig-like domain (group 2) 11.4 0.013 3
CBM_4_9 Carbohydrate binding domain 10.7 0.014 1
Glyco_hydro_16 Glycosyl hydrolases family 16 10.1 0.015 2
PsbR Photosystem II 10 kDa polypeptide Psb 9.9 0.024 2
Adeno_shaft Adenoviral fibre protein (repeat/shaf 10.9 0.08 4
Pyridox_oxidase Pyridoxamine 5'-phosphate oxidase 7.1 0.17 2
Fil_haemagg Haemagluttinin repeat 7.5 0.19 2
DUF2019 Domain of unknown function (DUF2019) 6.3 0.23 1
Ring_hydroxyl_B Ring hydroxylating beta subunit 5.2 0.46 1
Abhydrolase_3 alpha/beta hydrolase fold 5.0 0.5 1
Flp_Fap Flp/Fap pilin component 7.6 0.5 1
Spore_III_AE Stage III sporulation protein AE (spo 4.8 0.56 1
Sec_GG SecD/SecF GG Motif 6.2 0.61 2
Glyco_hydro_20 Glycosyl hydrolase family 20, catalyt 5.8 0.61 2
LTV Low temperature viability protein 3.4 0.66 1
Drf_DAD DRF Autoregulatory Domain 7.8 0.68 3
DUF1112 Protein of unknown function (DUF1112) 4.1 0.71 2
SOR Sulphur oxygenase reductase 3.3 0.8 2
Curlin_rpt Curlin associated repeat 5.1 0.87 3
Nif11 Nitrogen fixation protein of unknown 5.6 1 2
MCR_beta Methyl-coenzyme M reductase beta subu 2.1 1.1 1
DNA_mis_repair DNA mismatch repair protein, C-termin 4.3 1.1 1
M M protein repeat 7.3 1.2 2
DegV Uncharacterised protein, DegV family 3.6 1.2 1
Hydrolase haloacid dehalogenase-like hydrolase 3.7 1.2 1
Peptidase_M56 BlaR1 peptidase M56 3.7 1.3 2
CBM49 Carbohydrate binding domain CBM49 4.1 1.6 1
BAT2_N BAT2 N-terminus 2.6 1.7 1
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogen 0.4 1.8 1
PS_pyruv_trans Polysaccharide pyruvyl transferase 2.3 1.8 2
TraH_2 TraH_2 1.2 1.8 1
Viral_Hsp90 Viral heat shock protein Hsp90 homolo 2.3 1.9 1
Str_synth Strictosidine synthase 4.5 1.9 1
Autotransporter Autotransporter beta-domain 2.8 2.2 2
OmpA OmpA family 3.9 2.4 1
Thioesterase Thioesterase domain 2.4 2.4 1
DUF1110 Protein of unknown function (DUF1110) 1.7 2.6 1
SPOR Sporulation related domain 3.2 2.7 1
UPF0556 Uncharacterised protein family UPF055 2.0 2.7 2
Mad3_BUB1_II Mad3/BUB1 homology region 2 3.6 2.8 1
DUF523 Protein of unknown function (DUF523) 2.6 2.9 1
Terminase_1 Phage Terminase 0.3 2.9 1
Abhydrolase_2 Phospholipase/Carboxylesterase 2.5 3 1
efhand_2 EF-hand 2.8 3 2
PalH PalH/RIM21 0.9 3.2 1
Talin_middle Talin, middle domain 1.3 3.4 1
DUF556 Protein of unknown function (DUF556) 1.4 3.4 1
DUF1583 Protein of unknown function (DUF1583) 0.5 3.5 1
Cob_adeno_trans Cobalamin adenosyltransferase 3.0 3.5 2
Rick_17kDa_Anti Rickettsia 17 kDa surface antigen 3.4 3.5 1
FTP Fungalysin/Thermolysin Propeptide Mot 3.7 3.5 2
DUF101 Protein of unknown function DUF101 1.0 3.6 1
DUF1623 Protein of unknown function (DUF1623) 2.2 4.3 1
CX CX module 2.1 4.3 1
AAA_4 Divergent AAA domain 2.9 4.4 1
DUF2081 Uncharacterized conserved protein (DU 0.7 4.8 1
EspB Enterobacterial EspB protein -1.2 4.8 1
FLILHELTA Hypothetical protein FLILHELTA 2.3 5.2 2
Tir_receptor_C Translocated intimin receptor (Tir) C 0.7 5.2 1
Vsr DNA mismatch endonuclease Vsr 1.9 5.3 1
zf-CHC2 CHC2 zinc finger 2.6 5.3 1
Staph_haemo Staphylococcus haemolytic protein 3.0 5.3 1
TEBP_beta Telomere-binding protein beta subunit -1.6 5.4 1
EspF EspF protein repeat 1.3 5.5 1
Paramyxo_P Paramyxovirinae P phosphoprotein C-te 0.8 5.5 1
Not1 CCR4-Not complex component, Not1 0.5 5.7 1
Antimicrobial_8 Uperin family 4.0 5.7 1
UDPG_MGDP_dh UDP-glucose/GDP-mannose dehydrogenase 2.4 5.8 1
Hep_Hag Hep_Hag 4.1 6 2
PGAP1 PGAP1-like protein 0.8 6.4 1
DUF2002 Protein of unknown function (DUF2002) 0.8 6.6 2
DUF679 Protein of unknown function (DUF679) 0.7 6.6 1
Flavodoxin_NdrI NrdI Flavodoxin like 1.5 6.7 1
Homo_sperm_syn Homospermidine synthase -1.3 7 1
PCMT Protein-L-isoaspartate(D-aspartate) O 0.7 7 2
PilS PilS N terminal 0.8 7.3 2
DUF642 Protein of unknown function, DUF642 -0.9 7.4 1
DUF2509 Protein of unknown function (DUF2509) 0.9 7.4 1
RPAP1_C RPAP1-like, C-terminal 1.9 7.5 1
DUF1554 Protein of unknown function (DUF1554) 0.9 7.6 1
DUF383 Domain of unknown function (DUF383) 0.9 7.8 1
SpoIIE Stage II sporulation protein E (SpoII 0.3 8.1 2
ChaB ChaB 1.8 8.2 1
ADC_lyase Aminodeoxychorismate lyase -0.2 8.2 1
DUF2103 Predicted metal-binding protein (DUF2 1.6 8.2 1
Enhancin Viral enhancin protein -0.4 8.6 1
FdhD-NarQ FdhD/NarQ family 0.5 8.8 1
DUF469 Protein with unknown function (DUF469 -0.5 8.8 1
DUF1786 Putative pyruvate format-lyase activa -1.0 8.8 1
Spc24 Spc24 subunit of Ndc80 1.7 9 1
EAL EAL domain -0.1 9.1 1
BRCA-2_helical BRCA2, helical -0.2 9.1 1
GET2 GET complex subunit GET2 -0.8 9.2 1
Val_tRNA-synt_C Valyl tRNA synthetase tRNA binding ar 2.3 9.3 1
Herpes_MCP Herpes virus major capsid protein -2.6 9.4 1
DUF1655 Protein of unknown function (DUF1655) 1.8 9.4 1
ThiS ThiS family -0.0 9.4 1
Peptidase_M6 Immune inhibitor A peptidase M6 -1.8 9.5 1
Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase -1.3 9.8 1
MH1 MH1 domain 0.7 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CX 1/1 11 26 .. 1 19 [. 2.1 4.3
Homo_sperm_syn 1/1 23 33 .. 1 11 [. -1.3 7
AAA_4 1/1 49 81 .. 68 108 .] 2.9 4.4
HemolysinCabind 1/8 54 66 .. 1 13 [. 4.4 3.6
Curlin_rpt 1/3 82 104 .. 1 24 [. 1.7 12
RtxA 1/48 82 99 .. 1 19 [] 14.8 0.0032
RtxA 2/48 101 119 .. 1 19 [] 13.6 0.0072
RtxA 3/48 121 139 .. 1 19 [] 18.3 0.00029
RtxA 4/48 141 159 .. 1 19 [] 17.7 0.00044
Rick_17kDa_Anti 1/1 160 169 .. 39 48 .] 3.4 3.5
RtxA 5/48 161 185 .. 1 19 [] 9.1 0.16
Fil_haemagg 1/2 178 255 .. 1 75 [] 7.1 0.25
RtxA 6/48 187 205 .. 1 19 [] 17.5 0.0005
RtxA 7/48 207 225 .. 1 19 [] 17.0 0.0007
HemolysinCabind 2/8 217 234 .. 1 18 [] 0.1 73
RtxA 8/48 255 273 .. 1 19 [] 15.9 0.0015
RtxA 9/48 275 293 .. 1 19 [] 16.6 0.00095
SOR 1/2 345 362 .. 1 18 [. 1.4 2.6
DUF1110 1/1 374 389 .. 188 203 .] 1.7 2.6
MCR_beta 1/1 401 416 .. 1 16 [. 2.1 1.1
Flavodoxin_NdrI 1/1 459 469 .. 121 131 .] 1.5 6.7
SOR 2/2 483 505 .. 1 24 [. 1.8 2
Peptidase_M6 1/1 486 502 .. 687 703 .] -1.8 9.5
DUF101 1/1 510 520 .. 1 13 [. 1.0 3.6
Paramyxo_P 1/1 518 527 .. 239 248 .] 0.8 5.5
Talin_middle 1/1 566 583 .. 147 164 .] 1.3 3.4
RtxA 10/48 586 604 .. 1 19 [] 16.2 0.0012
Fil_haemagg 2/2 597 695 .. 1 75 [] 0.4 22
RtxA 11/48 606 624 .. 1 19 [] 15.8 0.0016
RtxA 12/48 626 644 .. 1 19 [] 25.1 2.7e-06
RtxA 13/48 646 664 .. 1 19 [] 16.6 0.00096
FTP 1/2 650 671 .. 31 51 .] 0.2 37
Ring_hydroxyl_B 1/1 650 679 .. 107 138 .. 5.2 0.46
RtxA 14/48 666 684 .. 1 19 [] 15.5 0.0019
RtxA 15/48 704 722 .. 1 19 [] 6.9 0.75
RtxA 16/48 723 741 .. 1 19 [] 16.3 0.0011
Curlin_rpt 2/3 731 747 .. 9 26 .. 0.5 30
DUF523 1/1 734 766 .. 61 94 .. 2.6 2.9
Sec_GG 1/2 742 758 .. 18 34 .] 2.4 8.3
RtxA 17/48 743 759 .. 2 19 .] 17.7 0.00043
RtxA 18/48 761 779 .. 1 19 [] 15.7 0.0017
RtxA 19/48 784 802 .. 1 19 [] 21.8 2.7e-05
DUF1786 1/1 803 809 .. 1 7 [. -1.0 8.8
RtxA 20/48 803 821 .. 1 19 [] 21.0 4.6e-05
RtxA 21/48 822 839 .. 1 19 [] 16.9 0.00078
Sec_GG 2/2 823 838 .. 19 34 .] 3.8 3.2
PCMT 1/2 841 854 .. 139 152 .. 0.7 7.2
RtxA 22/48 841 859 .. 1 19 [] 20.8 5.4e-05
RtxA 23/48 860 878 .. 1 19 [] 17.1 0.00068
Spore_III_AE 1/1 875 886 .. 317 328 .] 4.8 0.56
RtxA 24/48 879 897 .. 1 19 [] 17.4 0.00052
RtxA 25/48 898 916 .. 1 19 [] 15.2 0.0024
RPAP1_C 1/1 901 912 .. 69 80 .] 1.9 7.5
DUF1623 1/1 908 925 .. 37 55 .. 2.2 4.3
Herpes_MCP 1/1 915 927 .. 1 13 [. -2.6 9.4
RtxA 26/48 917 935 .. 1 19 [] 16.4 0.0011
Hydrolase 1/1 926 950 .. 160 184 .] 3.7 1.2
RtxA 27/48 936 954 .. 1 19 [] 15.2 0.0025
RtxA 28/48 955 973 .. 1 19 [] 16.3 0.0011
RtxA 29/48 974 992 .. 1 19 [] 18.8 0.00021
Cob_adeno_trans 1/2 980 987 .. 1 8 [. 0.9 12
Drf_DAD 1/3 984 997 .. 1 15 [] 0.3 78
RtxA 30/48 993 1011 .. 1 19 [] 17.5 0.00051
FdhD-NarQ 1/1 995 1004 .. 248 257 .] 0.5 8.8
Cob_adeno_trans 2/2 999 1005 .. 1 7 [. 2.1 5.9
RtxA 31/48 1013 1030 .. 2 19 .] 13.1 0.01
RtxA 32/48 1031 1048 .. 1 19 [] 16.0 0.0015
DegV 1/1 1037 1053 .. 204 220 .] 3.6 1.2
RtxA 33/48 1050 1067 .. 1 19 [] 12.7 0.014
Antimicrobial_8 1/1 1060 1076 .. 1 17 [] 4.0 5.7
RtxA 34/48 1069 1087 .. 1 19 [] 17.1 0.00066
RtxA 35/48 1089 1106 .. 2 19 .] 14.9 0.0031
PCMT 2/2 1112 1122 .. 143 153 .. 0.0 11
RtxA 36/48 1112 1126 .. 5 19 .] 7.7 0.43
Big_2 1/3 1125 1147 .. 67 90 .] 4.1 1.7
RtxA 37/48 1127 1145 .. 1 19 [] 20.2 8e-05
Adeno_shaft 1/4 1132 1144 .. 18 30 .] 3.0 12
RtxA 38/48 1146 1164 .. 1 19 [] 13.8 0.0064
Big_2 2/3 1165 1185 .. 69 90 .] 0.7 16
RtxA 39/48 1165 1183 .. 1 19 [] 23.1 1.1e-05
RtxA 40/48 1186 1202 .. 3 19 .] 12.5 0.016
Glyco_hydro_16 1/2 1196 1221 .. 1 30 [. 5.2 0.39
RtxA 41/48 1203 1221 .. 1 19 [] 21.2 4e-05
Ins_P5_2-kin 1/1 1220 1229 .. 1 10 [. -1.3 9.8
RtxA 42/48 1222 1240 .. 1 19 [] 15.9 0.0015
Glyco_hydro_16 2/2 1234 1261 .. 1 34 [. 4.9 0.48
Adeno_shaft 2/4 1244 1277 .. 1 30 [] 5.4 2.6
RtxA 43/48 1244 1259 .. 4 19 .] 7.0 0.7
Autotransporter 1/2 1257 1307 .. 240 296 .] 1.0 6.6
Big_2 3/3 1260 1280 .. 69 90 .] 6.6 0.31
RtxA 44/48 1260 1278 .. 1 19 [] 15.2 0.0025
RtxA 45/48 1279 1297 .. 1 19 [] 14.3 0.0046
RtxA 46/48 1298 1316 .. 1 19 [] 23.0 1.1e-05
Adeno_shaft 3/4 1303 1315 .. 18 30 .] 2.3 19
RtxA 47/48 1317 1335 .. 1 19 [] 10.0 0.087
Flp_Fap 1/1 1355 1378 .. 26 50 .] 7.6 0.5
CBM_4_9 1/1 1465 1483 .. 1 21 [. 10.7 0.014
DUF642 1/1 1466 1476 .. 165 175 .. -0.9 7.4
Not1 1/1 1597 1621 .. 391 415 .] 0.5 5.7
M 1/2 1629 1647 .. 1 19 [. 1.1 54
Spc24 1/1 1638 1662 .. 1 25 [. 1.7 9
Tir_receptor_C 1/1 1667 1675 .. 1 9 [. 0.7 5.2
DUF556 1/1 1669 1686 .. 221 238 .] 1.4 3.4
Val_tRNA-synt_C 1/1 1679 1693 .. 52 66 .] 2.3 9.3
M 2/2 1680 1700 .. 1 21 [] 6.2 2.4
UDPG_MGDP_dh 1/1 1684 1693 .. 1 10 [. 2.4 5.8
DUF2509 1/1 1721 1738 .. 9 26 .. 0.9 7.4
BAT2_N 1/1 1768 1783 .. 185 200 .] 2.6 1.7
LTV 1/1 2004 2022 .. 1 20 [. 3.4 0.66
CBM49 1/1 2009 2017 .. 83 91 .] 4.1 1.6
Curlin_rpt 3/3 2030 2047 .. 10 27 .. 2.8 4.9
DUF2081 1/1 2068 2084 .. 353 371 .] 0.7 4.8
DUF679 1/1 2199 2207 .. 1 9 [. 0.7 6.6
zf-CHC2 1/1 2204 2218 .. 84 98 .] 2.6 5.3
DUF2103 1/1 2262 2275 .. 1 14 [. 1.6 8.2
DUF1583 1/1 2269 2278 .. 1 10 [. 0.5 3.5
DUF469 1/1 2366 2370 .. 101 105 .] -0.5 8.8
Peptidase_M56 1/2 2431 2448 .. 79 97 .] 0.6 11
PsbR 1/2 2456 2493 .. 1 39 [. 4.5 0.8
Nif11 1/2 2486 2497 .. 1 12 [. 2.8 6.8
efhand_2 1/2 2525 2549 .. 1 27 [. 1.4 7.8
UPF0556 1/2 2570 2584 .. 156 170 .] 1.0 5.4
BRCA-2_helical 1/1 2576 2594 .. 1 20 [. -0.2 9.1
Drf_DAD 2/3 2587 2601 .. 1 15 [] 3.8 8.8
PilS 1/2 2614 2630 .. 1 17 [. 0.4 9.7
PS_pyruv_trans 1/2 2633 2710 .. 242 325 .. 1.1 3.7
Pyridox_oxidase 1/2 2640 2664 .. 72 99 .] 3.5 2
EspB 1/1 2643 2665 .. 1 25 [. -1.2 4.8
DUF1112 1/2 2649 2660 .. 1 13 [. 2.0 2.7
Glyco_hydro_20 1/2 2670 2685 .. 111 126 .. 2.9 3.1
Peptidase_C58 1/2 2678 2727 .. 200 247 .. 7.9 0.082
FLILHELTA 1/2 2693 2729 .. 47 99 .] 1.3 10
SpoIIE 1/2 2693 2709 .. 65 81 .. 0.1 8.9
DUF2002 1/2 2706 2724 .. 96 116 .] 0.5 8
Viral_Hsp90 1/1 2708 2724 .. 1 17 [. 2.3 1.9
Vsr 1/1 2787 2802 .. 1 15 [. 1.9 5.3
EspF 1/1 2837 2854 .. 30 47 .] 1.3 5.5
TEBP_beta 1/1 2879 2888 .. 378 387 .] -1.6 5.4
PGAP1 1/1 2885 2902 .. 1 21 [. 0.8 6.4
Abhydrolase_1 1/1 2917 3027 .. 1 103 [. 21.4 1e-05
Abhydrolase_3 1/1 2940 2992 .. 50 128 .. 5.0 0.5
Gp_dh_N 1/1 2946 2962 .. 138 156 .. 0.4 1.8
OmpA 1/1 2948 2973 .. 65 90 .. 3.9 2.4
Abhydrolase_2 1/1 2953 2970 .. 103 132 .. 2.5 3
Thioesterase 1/1 2965 2992 .. 78 108 .. 2.4 2.4
Staph_haemo 1/1 3092 3106 .. 1 15 [. 3.0 5.3
Peptidase_M56 2/2 3107 3124 .. 79 97 .] 3.1 2
PsbR 2/2 3132 3169 .. 1 39 [. 5.4 0.46
DUF383 1/1 3156 3174 .. 57 75 .. 0.9 7.8
Nif11 2/2 3162 3173 .. 1 12 [. 2.8 6.8
efhand_2 2/2 3201 3225 .. 1 27 [. 1.4 7.8
UPF0556 2/2 3246 3260 .. 156 170 .] 1.0 5.4
Drf_DAD 3/3 3263 3277 .. 1 15 [] 3.8 8.8
PilS 2/2 3290 3306 .. 1 17 [. 0.4 9.7
PS_pyruv_trans 2/2 3309 3386 .. 242 325 .. 1.1 3.7
Pyridox_oxidase 2/2 3316 3340 .. 72 99 .] 3.5 2
DUF1112 2/2 3325 3336 .. 1 13 [. 2.0 2.7
Glyco_hydro_20 2/2 3346 3361 .. 111 126 .. 2.9 3.1
Peptidase_C58 2/2 3354 3403 .. 200 247 .. 5.9 0.29
FLILHELTA 2/2 3369 3405 .. 47 99 .] 1.0 12
SpoIIE 2/2 3369 3385 .. 65 81 .. 0.1 8.9
DUF2002 2/2 3382 3400 .. 96 116 .] 0.3 9.5
ADC_lyase 1/1 3486 3493 .. 310 317 .] -0.2 8.2
SPOR 1/1 3523 3555 .. 17 49 .. 3.2 2.7
FTP 2/2 3537 3557 .. 31 51 .] 3.5 4.1
ChaB 1/1 3661 3675 .. 46 60 .] 1.8 8.2
TraH_2 1/1 3706 3713 .. 202 209 .] 1.2 1.8
Adeno_shaft 4/4 3755 3765 .. 1 11 [. 0.2 70
Hep_Hag 1/2 3783 3796 .. 1 14 [. 3.4 9.2
Autotransporter 2/2 3790 3827 .. 1 51 [. 1.8 4.1
RtxA 48/48 3790 3807 .. 1 19 [] 4.4 4.2
Enhancin 1/1 3843 3855 .. 1 13 [. -0.4 8.6
GET2 1/1 4005 4011 .. 324 330 .] -0.8 9.2
DNA_mis_repair 1/1 4075 4098 .. 1 29 [. 4.3 1.1
ThiS 1/1 4141 4158 .. 1 27 [. -0.0 9.4
MH1 1/1 4187 4210 .. 1 26 [. 0.7 9.9
HemolysinCabind 3/8 4261 4278 .. 1 18 [] 6.1 1.1
PalH 1/1 4265 4276 .. 420 431 .] 0.9 3.2
HemolysinCabind 4/8 4279 4285 .. 1 7 [. 1.8 22
HemolysinCabind 5/8 4297 4304 .. 1 8 [. 4.0 4.9
Hep_Hag 2/2 4344 4367 .. 9 28 .] 0.7 50
DUF1655 1/1 4361 4372 .. 43 55 .] 1.8 9.4
DUF1554 1/1 4380 4390 .. 162 172 .] 0.9 7.6
HemolysinCabind 6/8 4384 4395 .. 7 18 .] 0.8 47
HemolysinCabind 7/8 4403 4413 .. 8 18 .] 2.4 15
HemolysinCabind 8/8 4425 4442 .. 1 18 [] 2.3 16
Mad3_BUB1_II 1/1 4491 4506 .. 1 16 [. 3.6 2.8
Str_synth 1/1 4523 4537 .. 23 38 .. 4.5 1.9
Terminase_1 1/1 4549 4560 .. 519 530 .] 0.3 2.9
DUF2019 1/1 4557 4573 .. 89 106 .] 6.3 0.23
EAL 1/1 4565 4595 .] 184 218 .. -0.1 9.1
Alignments of top-scoring domains:
CX: domain 1 of 1, from 11 to 26: score 2.1, E = 4.3
*->YYWsgkdknYvsspennti<-*
Y+ g nY ++ +nn+i
gi|1539715 11 YFFTG---NYSADDGNNSI 26
Homo_sperm_syn: domain 1 of 1, from 23 to 33: score -1.3, E = 7
*->dgpilmIGfGS<-*
+ i+ IGfG+
gi|1539715 23 NNSIVAIGFGG 33
AAA_4: domain 1 of 1, from 49 to 81: score 2.9, E = 4.4
*->ivievpegpekpypckkkkvenlkggvYiRvgdsdrpatre<-*
i +v+ g+ ++ ++ g +Y Rv d++ +++ +
gi|1539715 49 IGAKVYTGSGNDTVVG--------GSAYLRVEDTTGHLSVK 81
HemolysinCabind: domain 1 of 8, from 54 to 66: score 4.4, E = 3.6
CS E--SSS-EEEEES
*->yGGaGnDtLyGga<-*
y G GnDt Gg+
gi|1539715 54 YTGSGNDTVVGGS 66
Curlin_rpt: domain 1 of 3, from 82 to 104: score 1.7, E = 12
*->GddNsvditQsGdaNsAligQtnG<-*
G + ++di sGd+N++++g++ G
gi|1539715 82 GAAGYADINKSGDGNVSFAGAA-G 104
RtxA: domain 1 of 48, from 82 to 99: score 14.8, E = 0.0032
*->GaGgaNvitkvGdggdlaf<-*
Ga+g++ i+k+G +g+++f
gi|1539715 82 GAAGYADINKSG-DGNVSF 99
RtxA: domain 2 of 48, from 101 to 119: score 13.6, E = 0.0072
*->GaGgaNvitkvGdggdlaf<-*
Ga+g+ i++ G++gd+++
gi|1539715 101 GAAGGVSIDHLGNHGDVNY 119
RtxA: domain 3 of 48, from 121 to 139: score 18.3, E = 0.00029
*->GaGgaNvitkvGdggdlaf<-*
Ga+++N it++G +g+++f
gi|1539715 121 GAAAYNGITRKGLSGNVTF 139
RtxA: domain 4 of 48, from 141 to 159: score 17.7, E = 0.00044
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N +++ ++g+l+f
gi|1539715 141 GAGGYNALWHETNQGNLSF 159
Rick_17kDa_Anti: domain 1 of 1, from 160 to 169: score 3.4, E = 3.5
*->aGalaGnaid<-*
aGa+aGn+ d
gi|1539715 160 AGAGAGNKLD 169
RtxA: domain 5 of 48, from 161 to 185: score 9.1, E = 0.16
*->GaGgaNvitkv.......Gdggdlaf<-*
GaG++N+++++ ++ +++ +gd++f
gi|1539715 161 GAGAGNKLDRTwfnryqdS-RGDVTF 185
Fil_haemagg: domain 1 of 2, from 178 to 255: score 7.1, E = 0.25
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++ G++t + a +++n + + + +g++t ++ag++n +
gi|1539715 178 DSRGDVTFDGA----GAANSISSRVETGNITFRGAGADNHLVRKGKV 220
CS .............. .EEEEESS-EEEEE
gdlllaagalrngg.......dltltaaGdLdnsg<-*
gd++l+++ ++n+ +++++ +d+ + ++G+++ g
gi|1539715 221 GDVTLQGAGASNRIertrqaeDVYVQTRGNIRFEG 255
RtxA: domain 6 of 48, from 187 to 205: score 17.5, E = 0.0005
*->GaGgaNvitkvGdggdlaf<-*
GaG+aN i ++++ g+++f
gi|1539715 187 GAGAANSISSRVETGNITF 205
RtxA: domain 7 of 48, from 207 to 225: score 17.0, E = 0.0007
*->GaGgaNvitkvGdggdlaf<-*
GaG+ N+++++G+ gd+++
gi|1539715 207 GAGADNHLVRKGKVGDVTL 225
HemolysinCabind: domain 2 of 8, from 217 to 234: score 0.1, E = 73
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G G+ tL G + +++
gi|1539715 217 KGKVGDVTLQGAGASNRI 234
RtxA: domain 8 of 48, from 255 to 273: score 15.9, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
G Gg+N +++ +++gd++f
gi|1539715 255 GVGGYNSLYSDVAHGDIHF 273
RtxA: domain 9 of 48, from 275 to 293: score 16.6, E = 0.00095
*->GaGgaNvitkvGdggdlaf<-*
G+G++N it++G+g ++f
gi|1539715 275 GGGAYNTITRKGSGSGSSF 293
SOR: domain 1 of 2, from 345 to 362: score 1.4, E = 2.6
*->pkpyvAINmakvkNePkt<-*
+ y IN++ + N+P t
gi|1539715 345 DGTYTKINKVRLYNDPET 362
DUF1110: domain 1 of 1, from 374 to 389: score 1.7, E = 2.6
*->elGtelAvdARqDVSg<-*
++G+ lA AR DVS
gi|1539715 374 KRGNHLAELARSDVSS 389
MCR_beta: domain 1 of 1, from 401 to 416: score 2.1, E = 1.1
CS T-GGG---HHHHHHHT
*->GYaLRnimvnHvvAvt<-*
GY+L ni v H vt
gi|1539715 401 GYTLSNIAVEHQQSVT 416
Flavodoxin_NdrI: domain 1 of 1, from 459 to 469: score 1.5, E = 6.7
CS --HHHHHHHHH
*->GTneDVerVrk<-*
GT+ DV++V+
gi|1539715 459 GTAVDVQAVKS 469
SOR: domain 2 of 2, from 483 to 505: score 1.8, E = 2
*->pkpyvAINmakvkNePktlELfsk<-*
+py I +++ N+Pkt L ++
gi|1539715 483 -GPYTKIVVVELANDPKTGALKYQ 505
Peptidase_M6: domain 1 of 1, from 486 to 502: score -1.8, E = 9.5
*->LKikvlgQAkdgSagav<-*
+Ki v++ A+d +ga+
gi|1539715 486 TKIVVVELANDPKTGAL 502
DUF101: domain 1 of 1, from 510 to 520: score 1.0, E = 3.6
CS EEEEE-..SSEEE
*->yeyldHIATADvg<-*
y++ H TAD++
gi|1539715 510 YKEGNH--TADLA 520
Paramyxo_P: domain 1 of 1, from 518 to 527: score 0.8, E = 5.5
*->elfeEDisSl<-*
+l +EDisS
gi|1539715 518 DLANEDISSA 527
Talin_middle: domain 1 of 1, from 566 to 583: score 1.3, E = 3.4
*->qnllnAAgrVGeASghlL<-*
q+l++ A+ Ge Sg++
gi|1539715 566 QTLFKPATDSGESSGDVH 583
RtxA: domain 10 of 48, from 586 to 604: score 16.2, E = 0.0012
*->GaGgaNvitkvGdggdlaf<-*
GaGg+Nvi + +++g+++f
gi|1539715 586 GAGGGNVIKSNVTRGNVYF 604
Fil_haemagg: domain 2 of 2, from 597 to 695: score 0.4, E = 22
CS EEESSEEEETT TT--EE-SEEEEEE-STT-E
*->vaaGaltlnaa................alggldlnnggtlsaggglt
v+ G++ n ++ + ++++ +++ +gg+++n + + + +g+lt
gi|1539715 597 VTRGNVYFNGGgianvilhssqfghteFNGGGAANVIVKSGEEGDLT 643
CS EEE-S-EEESSE.................. .EEEEESS-EEE
ltaagllnnggtliaggdlllaagalrngg........dltltaaGdLdn
++agl n ++++g +++ ag + n + ++++ ++l a G++++
gi|1539715 644 FRGAGLANVLVHQSKQGKMDVYAGGAVNVLvrigdgqyLAHLLAYGNISV 693
CS EE
sg<-*
+
gi|1539715 694 HK 695
RtxA: domain 11 of 48, from 606 to 624: score 15.8, E = 0.0016
*->GaGgaNvitkvGdggdlaf<-*
G+G aNvi ++++ g+++f
gi|1539715 606 GGGIANVILHSSQFGHTEF 624
RtxA: domain 12 of 48, from 626 to 644: score 25.1, E = 2.7e-06
*->GaGgaNvitkvGdggdlaf<-*
G+G+aNvi+k+G++gdl+f
gi|1539715 626 GGGAANVIVKSGEEGDLTF 644
RtxA: domain 13 of 48, from 646 to 664: score 16.6, E = 0.00096
*->GaGgaNvitkvGdggdlaf<-*
GaG aNv+++ +++g +++
gi|1539715 646 GAGLANVLVHQSKQGKMDV 664
FTP: domain 1 of 2, from 650 to 671: score 0.2, E = 37
*->geliVhvskdGkv.ksvsGdfs<-*
+ + Vh sk+Gk ++ + G++
gi|1539715 650 ANVLVHQSKQGKMdVYAGGAVN 671
Ring_hydroxyl_B: domain 1 of 1, from 650 to 679: score 5.2, E = 0.46
CS EEEEEEEEETT.TEEEEEEEEEEEEEEE-SST
*->SnflvyRnRlevrtvdvfaGereDvLRrsgdg<-*
+n+lv+ ++ + + dv+aG++ vL r gdg
gi|1539715 650 ANVLVHQSKQG--KMDVYAGGAVNVLVRIGDG 679
RtxA: domain 14 of 48, from 666 to 684: score 15.5, E = 0.0019
*->GaGgaNvitkvGdggdlaf<-*
++G+ Nv++++Gdg++la+
gi|1539715 666 AGGAVNVLVRIGDGQYLAH 684
RtxA: domain 15 of 48, from 704 to 722: score 6.9, E = 0.75
*->GaGgaNvitkvGdggdlaf<-*
++Gg+N t++G+g+ l +
gi|1539715 704 MLGGYNTHTQIGSGNGLWL 722
RtxA: domain 16 of 48, from 723 to 741: score 16.3, E = 0.0011
*->GaGgaNvitkvGdggdlaf<-*
+aGg Nv+t+vG+g+ ++
gi|1539715 723 AAGGFNVMTQVGKGNVASV 741
Curlin_rpt: domain 2 of 3, from 731 to 747: score 0.5, E = 30
*->tQsGdaNsAligQtnGsn<-*
tQ+G +N+A++++ G n
gi|1539715 731 TQVGKGNVASVLAG-GAN 747
DUF523: domain 1 of 1, from 734 to 766: score 2.6, E = 2.9
*->skGdGgdVLdGrarvvtskdtGeDVTeaflagAe<-*
+kG+ + VL+G a v+t+ + D+T+ +l gA+
gi|1539715 734 GKGNVASVLAGGANVLTK-VGDGDLTAGMLGGAN 766
Sec_GG: domain 1 of 2, from 742 to 758: score 2.4, E = 8.3
*->lkGGtrillkvdksvtq<-*
l GG+++l+kv + + +
gi|1539715 742 LAGGANVLTKVGDGDLT 758
RtxA: domain 17 of 48, from 743 to 759: score 17.7, E = 0.00043
*->aGgaNvitkvGdggdlaf<-*
aGgaNv+tkvG +gdl++
gi|1539715 743 AGGANVLTKVG-DGDLTA 759
RtxA: domain 18 of 48, from 761 to 779: score 15.7, E = 0.0017
*->GaGgaNvitkvGdggdlaf<-*
++GgaNvit+++ +++++
gi|1539715 761 MLGGANVITHISGDNETSN 779
RtxA: domain 19 of 48, from 784 to 802: score 21.8, E = 2.7e-05
*->GaGgaNvitkvGdggdlaf<-*
++GgaN++tk+G+g+ la+
gi|1539715 784 ALGGANILTKKGKGNALAV 802
DUF1786: domain 1 of 1, from 803 to 809: score -1.0, E = 8.8
*->MGGGPvT<-*
MGGG+++
gi|1539715 803 MGGGANV 809
RtxA: domain 20 of 48, from 803 to 821: score 21.0, E = 4.6e-05
*->GaGgaNvitkvGdggdlaf<-*
++GgaNv+t+vGdg ++ +
gi|1539715 803 MGGGANVLTHVGDGTTTGV 821
RtxA: domain 21 of 48, from 822 to 839: score 16.9, E = 0.00078
*->GaGgaNvitkvGdggdlaf<-*
+ GgaN++tkvG +gd++
gi|1539715 822 MVGGANILTKVG-NGDTTG 839
Sec_GG: domain 2 of 2, from 823 to 838: score 3.8, E = 3.2
*->kGGtrillkvdksvtq<-*
+GG++il+kv + +t+
gi|1539715 823 VGGANILTKVGNGDTT 838
PCMT: domain 1 of 2, from 841 to 854: score 0.7, E = 7.2
CS HHHTTSEEEEES-G
*->lLksGnVivvvGDG<-*
+L GnV+++vGDG
gi|1539715 841 MLGVGNVLTHVGDG 854
RtxA: domain 22 of 48, from 841 to 859: score 20.8, E = 5.4e-05
*->GaGgaNvitkvGdggdlaf<-*
++G++Nv+t+vGdg++l +
gi|1539715 841 MLGVGNVLTHVGDGQTLGV 859
RtxA: domain 23 of 48, from 860 to 878: score 17.1, E = 0.00068
*->GaGgaNvitkvGdggdlaf<-*
+++++N+ tkvGdg ++a+
gi|1539715 860 MGAAGNIFTKVGDGTSIAV 878
Spore_III_AE: domain 1 of 1, from 875 to 886: score 4.8, E = 0.56
*->aItIivgaGNit<-*
+I++++gaGNi
gi|1539715 875 SIAVMIGAGNIF 886
RtxA: domain 24 of 48, from 879 to 897: score 17.4, E = 0.00052
*->GaGgaNvitkvGdggdlaf<-*
++G++N+ t+vG+g+ a+
gi|1539715 879 MIGAGNIFTHVGEGNAWAL 897
RtxA: domain 25 of 48, from 898 to 916: score 15.2, E = 0.0024
*->GaGgaNvitkvGdggdlaf<-*
++G +Nv tkvG+g la+
gi|1539715 898 MGGLGNVFTKVGNGDALAL 916
RPAP1_C: domain 1 of 1, from 901 to 912: score 1.9, E = 7.5
*->LgrILyklgkge<-*
Lg+++ k+g+g+
gi|1539715 901 LGNVFTKVGNGD 912
DUF1623: domain 1 of 1, from 908 to 925: score 2.2, E = 4.3
*->CPcNGDCLAVvvssdnitt<-*
+ +NGD LA+ v ++n++t
gi|1539715 908 V-GNGDALALMVAEANVFT 925
Herpes_MCP: domain 1 of 1, from 915 to 927: score -2.6, E = 9.4
CS XXXXXXXXXXXXX
*->PylapsgnLLsqI<-*
+ +++++n++++I
gi|1539715 915 ALMVAEANVFTHI 927
RtxA: domain 26 of 48, from 917 to 935: score 16.4, E = 0.0011
*->GaGgaNvitkvGdggdlaf<-*
+ ++aNv t++Gdg ++a+
gi|1539715 917 MVAEANVFTHIGDGMSVAL 935
Hydrolase: domain 1 of 1, from 926 to 950: score 3.7, E = 1.2
CS EEESSCHHHHHHHHCTEEEEEESSH
*->mVGDgvnDapalaaAGvgvamgngg<-*
++GDg a +la+ +v++ gng+
gi|1539715 926 HIGDGMSVALMLAKGNVATKVGNGT 950
RtxA: domain 27 of 48, from 936 to 954: score 15.2, E = 0.0025
*->GaGgaNvitkvGdggdlaf<-*
+++++Nv tkvG+g +la+
gi|1539715 936 MLAKGNVATKVGNGTTLAA 954
RtxA: domain 28 of 48, from 955 to 973: score 16.3, E = 0.0011
*->GaGgaNvitkvGdggdlaf<-*
+ G aN+ t+vG+g + a+
gi|1539715 955 MVGNANIFTHVGSGSTFAA 973
RtxA: domain 29 of 48, from 974 to 992: score 18.8, E = 0.00021
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++tkvGd+ + a+
gi|1539715 974 MIGQANIMTKVGDDLTAAL 992
Cob_adeno_trans: domain 1 of 2, from 980 to 987: score 0.9, E = 12
CS --------
*->iYTRTGDk<-*
i+T+ GD+
gi|1539715 980 IMTKVGDD 987
Drf_DAD: domain 1 of 3, from 984 to 997: score 0.3, E = 78
*->GvmDsLLEALqsGaA<-*
v D+L AL G A
gi|1539715 984 -VGDDLTAALMVGKA 997
RtxA: domain 30 of 48, from 993 to 1011: score 17.5, E = 0.00051
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN+ t+vGdg +l
gi|1539715 993 MVGKANIYTHVGDGTSLGI 1011
FdhD-NarQ: domain 1 of 1, from 995 to 1004: score 0.5, E = 8.8
*->gkfNvYthpe<-*
gk+N+Yth
gi|1539715 995 GKANIYTHVG 1004
Cob_adeno_trans: domain 2 of 2, from 999 to 1005: score 2.1, E = 5.9
CS -------
*->iYTRTGD<-*
iYT+ GD
gi|1539715 999 IYTHVGD 1005
RtxA: domain 31 of 48, from 1013 to 1030: score 13.1, E = 0.01
*->aGgaNvitkvGdggdlaf<-*
aG+ Nv+tkvG+g +la+
gi|1539715 1013 AGEVNVMTKVGNGTTLAA 1030
RtxA: domain 32 of 48, from 1031 to 1048: score 16.0, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN++t+vG +g + +
gi|1539715 1031 MFGKANIMTHVG-DGLTGV 1048
DegV: domain 1 of 1, from 1037 to 1053: score 3.6, E = 1.2
CS HHHHH-TT-EEEEEEEE
*->IgtHtGpGalgvaiipk<-*
I tH+G G gv+++++
gi|1539715 1037 IMTHVGDGLTGVLALGE 1053
RtxA: domain 33 of 48, from 1050 to 1067: score 12.7, E = 0.014
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++tkvG + + +
gi|1539715 1050 ALGEANIVTKVG-DDFMGV 1067
Antimicrobial_8: domain 1 of 1, from 1060 to 1076: score 4.0, E = 5.7
*->GVgdlirKivsaiK.NVv<-*
Vgd + +v+a K NVv
gi|1539715 1060 -VGDDFMGVVAAAKaNVV 1076
RtxA: domain 34 of 48, from 1069 to 1087: score 17.1, E = 0.00066
*->GaGgaNvitkvGdggdlaf<-*
+a++aNv+t+vGd + a+
gi|1539715 1069 AAAKANVVTHVGDATTAAV 1087
RtxA: domain 35 of 48, from 1089 to 1106: score 14.9, E = 0.0031
*->aGgaNvitkvGdggdlaf<-*
aG++N++tkvG+g ++ +
gi|1539715 1089 AGKGNILTKVGEGTTVGL 1106
PCMT: domain 2 of 2, from 1112 to 1122: score 0.0, E = 11
CS TSEEEEES-GG
*->GnVivvvGDGr<-*
GnV ++vGDG+
gi|1539715 1112 GNVMTHVGDGT 1122
RtxA: domain 36 of 48, from 1112 to 1126: score 7.7, E = 0.43
*->aNvitkvGdggdlaf<-*
+Nv+t+vGdg ++
gi|1539715 1112 GNVMTHVGDGTTIGI 1126
Big_2: domain 1 of 3, from 1125 to 1147: score 4.1, E = 1.7
CS E-SSS-EEEEEEETT.TEEEEEEE
*->alakGtatItatsgdgnksasvtv<-*
++akG+a+I ++gd + ++ v
gi|1539715 1125 GIAKGKANIITKVGD-GLGVNVAW 1147
RtxA: domain 37 of 48, from 1127 to 1145: score 20.2, E = 8e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+itkvGdg +++
gi|1539715 1127 AKGKANIITKVGDGLGVNV 1145
Adeno_shaft: domain 1 of 4, from 1132 to 1144: score 3.0, E = 12
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
++ +k+G+gL+v+
gi|1539715 1132 NIITKVGDGLGVN 1144
RtxA: domain 38 of 48, from 1146 to 1164: score 13.8, E = 0.0064
*->GaGgaNvitkvGdggdlaf<-*
++G+aN t+vGdg +f
gi|1539715 1146 AWGQANLFTQVGDGDRYNF 1164
Big_2: domain 2 of 3, from 1165 to 1185: score 0.7, E = 16
CS SSS-EEEEEEETT.TEEEEEEE
*->akGtatItatsgdgnksasvtv<-*
akG a++ ++gd ++ +sv
gi|1539715 1165 AKGEANVITKVGD-GQEVSVVQ 1185
RtxA: domain 39 of 48, from 1165 to 1183: score 23.1, E = 1.1e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aNvitkvGdg+++++
gi|1539715 1165 AKGEANVITKVGDGQEVSV 1183
RtxA: domain 40 of 48, from 1186 to 1202: score 12.5, E = 0.016
*->GgaNvitkvGdggdlaf<-*
G+aN+it+vG+g d +
gi|1539715 1186 GKANIITHVGNGDDYTG 1202
Glyco_hydro_16: domain 1 of 2, from 1196 to 1221: score 5.2, E = 0.39
CS SBTTBTTEE-GGGEEEE...TT...SEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtL<-*
+g+d++ wg+ nv + +G++++L
gi|1539715 1196 NGDDYTGAWGKANVITK---VG-NGRNVVL 1221
RtxA: domain 41 of 48, from 1203 to 1221: score 21.2, E = 4e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aNvitkvG+g ++ +
gi|1539715 1203 AWGKANVITKVGNGRNVVL 1221
Ins_P5_2-kin: domain 1 of 1, from 1220 to 1229: score -1.3, E = 9.8
*->YlaEGgANiV<-*
la+G ANiV
gi|1539715 1220 VLAKGEANIV 1229
RtxA: domain 42 of 48, from 1222 to 1240: score 15.9, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++t+vGdg + ++
gi|1539715 1222 AKGEANIVTQVGDGDSFNA 1240
Glyco_hydro_16: domain 2 of 2, from 1234 to 1261: score 4.9, E = 0.48
CS SBTTBTTEE-GGGEEEE...TT...SEEEEEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtLtldk<-*
g+ f+++w++gn++ + +g++ t++k
gi|1539715 1234 DGDSFNALWSKGNIVTK---VG---DGMQVTAAK 1261
Adeno_shaft: domain 2 of 4, from 1244 to 1277: score 5.4, E = 2.6
CS S--EEE-B-TTEEE-TS- EEE-B-TTEEEE
*->nnsLtlntgpGLtvtnna....LalklGagLtvd<-*
+++ ++g+G++vt +++ ++++ +G+gL+v+
gi|1539715 1244 KGNIVTKVGDGMQVTAAKgkanITTTVGDGLSVT 1277
RtxA: domain 43 of 48, from 1244 to 1259: score 7.0, E = 0.7
*->gaNvitkvGdggdlaf<-*
++N++tkvGdg +++
gi|1539715 1244 KGNIVTKVGDGMQVTA 1259
Autotransporter: domain 1 of 2, from 1257 to 1307: score 1.0, E = 6.6
CS ---- ---- --.---------EEEEEEEEEEEEECTTEEEEEEEEE
*->vnsa.llaa.gslfgvasgtpldrtalslgaGlelklgsnlslflny
v++a++ a+ ++++g l+ ta+ a+ ++k+g+++s+++ +
gi|1539715 1257 VTAAkGKANiTTTVGDG----LSVTAAYGDANINTKIGDGVSVNVAW 1299
CS E....TTEEEEE
saefgsqlsdng<-*
+ ++ +++
gi|1539715 1300 G----KYNINTK 1307
Big_2: domain 3 of 3, from 1260 to 1280: score 6.6, E = 0.31
CS SSS-EEEEEEETT.TEEEEEEE
*->akGtatItatsgdgnksasvtv<-*
akG+a+It t+gd + s+++
gi|1539715 1260 AKGKANITTTVGD-GLSVTAAY 1280
RtxA: domain 44 of 48, from 1260 to 1278: score 15.2, E = 0.0025
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+ t vGdg ++++
gi|1539715 1260 AKGKANITTTVGDGLSVTA 1278
RtxA: domain 45 of 48, from 1279 to 1297: score 14.3, E = 0.0046
*->GaGgaNvitkvGdggdlaf<-*
+ G aN+ tk+Gdg ++++
gi|1539715 1279 AYGDANINTKIGDGVSVNV 1297
RtxA: domain 46 of 48, from 1298 to 1316: score 23.0, E = 1.1e-05
*->GaGgaNvitkvGdggdlaf<-*
++G++N+ tkvGdg ++a+
gi|1539715 1298 AWGKYNINTKVGDGLNVAV 1316
Adeno_shaft: domain 3 of 4, from 1303 to 1315: score 2.3, E = 19
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
++++k+G+gL+v
gi|1539715 1303 NINTKVGDGLNVA 1315
RtxA: domain 47 of 48, from 1317 to 1335: score 10.0, E = 0.087
*->GaGgaNvitkvGdggdlaf<-*
++G+aN ++Gdg +++
gi|1539715 1317 MKGKANANIHIGDGLGINA 1335
Flp_Fap: domain 1 of 1, from 1355 to 1378: score 7.6, E = 0.5
*->AVayvttlgitaLktkFtkigtalt<-*
AVa ++t++ ++L+++F +i ++
gi|1539715 1355 AVASSNTSS-NKLSALFDNIKQTVL 1378
CBM_4_9: domain 1 of 1, from 1465 to 1483: score 10.7, E = 0.014
*->gnlikngtFEdpgglsgWkar<-*
nli+ng+FE g +gWk +
gi|1539715 1465 PNLIVNGDFEQ--GDQGWKST 1483
DUF642: domain 1 of 1, from 1466 to 1476: score -0.9, E = 7.4
*->NllkNGgFEeG<-*
Nl+ NG+FE G
gi|1539715 1466 NLIVNGDFEQG 1476
Not1: domain 1 of 1, from 1597 to 1621: score 0.5, E = 5.7
*->LFqsvakycmglkssqqvmqsegae<-*
++++v+ + ++++ v++ ++ +
gi|1539715 1597 ILDNVVAKSESSQQANAVSEHATQN 1621
M: domain 1 of 2, from 1629 to 1647: score 1.1, E = 54
*->eaKKeLEaelqeLeeelqk<-*
+ K+ Ea++q Le+e+qk
gi|1539715 1629 SDKERAEADRQRLEQEKQK 1647
Spc24: domain 1 of 1, from 1638 to 1662: score 1.7, E = 9
*->ileldnekfrlakelndLEseinsL<-*
+++l++ek++ ++++ +s+++s+
gi|1539715 1638 RQRLEQEKQKQLDAVAGSQSQLEST 1662
Tir_receptor_C: domain 1 of 1, from 1667 to 1675: score 0.7, E = 5.2
*->iEsNAQAQq<-*
E+N QAQ+
gi|1539715 1667 LENNGQAQR 1675
DUF556: domain 1 of 1, from 1669 to 1686: score 1.4, E = 3.4
*->naGrIkReLVkeLkelvd<-*
n+G +R++Vke e+v
gi|1539715 1669 NNGQAQRDAVKEESEAVT 1686
Val_tRNA-synt_C: domain 1 of 1, from 1679 to 1693: score 2.3, E = 9.3
*->eeqleklkerLsqLa<-*
+e+ e++++ L++La
gi|1539715 1679 KEESEAVTAELTKLA 1693
M: domain 2 of 2, from 1680 to 1700: score 6.2, E = 2.4
*->eaKKeLEaelqeLeeelqkLe<-*
e+ ++++ael +L + l+ L+
gi|1539715 1680 EESEAVTAELTKLAQGLDVLD 1700
UDPG_MGDP_dh: domain 1 of 1, from 1684 to 1693: score 2.4, E = 5.8
CS HHHHHHHHHH
*->lktAEliKya<-*
+ tAEl+K+a
gi|1539715 1684 AVTAELTKLA 1693
DUF2509: domain 1 of 1, from 1721 to 1738: score 0.9, E = 7.4
*->LLsGlhrQLDsalartad<-*
LL G++rQLD a ++++d
gi|1539715 1721 LLDGVQRQLDDAKQLAND 1738
BAT2_N: domain 1 of 1, from 1768 to 1783: score 2.6, E = 1.7
*->Gdqdksgkekdatdes<-*
G+q ++g e+d++d+
gi|1539715 1768 GEQNRAGAEQDIADAK 1783
LTV: domain 1 of 1, from 2004 to 2022: score 3.4, E = 0.66
*->eKKkAqsFhLVHRsQrDPla<-*
K+ Aq+F VH sQ Pl+
gi|1539715 2004 -KNSAQTFGYVHDSQGNPLF 2022
CBM49: domain 1 of 1, from 2009 to 2017: score 4.1, E = 1.6
*->sFGYIhksq<-*
+FGY+h sq
gi|1539715 2009 TFGYVHDSQ 2017
Curlin_rpt: domain 3 of 3, from 2030 to 2047: score 2.8, E = 4.9
*->QsGdaNsAligQtnGsnN<-*
Q G++N A i ++nG nN
gi|1539715 2030 QGGYSNPAGITDINGLNN 2047
DUF2081: domain 1 of 1, from 2068 to 2084: score 0.7, E = 4.8
*->leaRrkllaalieeaiIlg<-*
+e R+++++ l++e++ g
gi|1539715 2068 IESRKEAMLWLAKEFT--G 2084
DUF679: domain 1 of 1, from 2199 to 2207: score 0.7, E = 6.6
*->LsstAnLak<-*
+s tA+Lak
gi|1539715 2199 YSKTADLAK 2207
zf-CHC2: domain 1 of 1, from 2204 to 2218: score 2.6, E = 5.3
*->kLAdragielpyekg<-*
+LA+++gi ++++++
gi|1539715 2204 DLAKEFGIYINDWDP 2218
DUF2103: domain 1 of 1, from 2262 to 2275: score 1.6, E = 8.2
*->vekppkeKlGGsHs<-*
v eKl+GsHs
gi|1539715 2262 VRQQIIEKLKGSHS 2275
DUF1583: domain 1 of 1, from 2269 to 2278: score 0.5, E = 3.5
*->elkGSnlEsL<-*
lkGS+ EsL
gi|1539715 2269 KLKGSHSESL 2278
DUF469: domain 1 of 1, from 2366 to 2370: score -0.5, E = 8.8
*->vDaWy<-*
+DaWy
gi|1539715 2366 FDAWY 2370
Peptidase_M56: domain 1 of 2, from 2431 to 2448: score 0.6, E = 11
*->aVLarlpkneRkeYgetLL<-*
+VL++l + +k+Yg++L
gi|1539715 2431 EVLKGLQE-DFKRYGDALK 2448
PsbR: domain 1 of 2, from 2456 to 2493: score 4.5, E = 0.8
*->sggkKvktdkpyleGiddPtvqqnlkGigggmklkngVD<-*
+ k + t+k +l+G + + + G m++k+ VD
gi|1539715 2456 -KSKDIRTTKDFLNGYKNDHAKDIVDGFHSEMSIKQLVD 2493
Nif11: domain 1 of 2, from 2486 to 2497: score 2.8, E = 6.8
*->MseeqLkaFLak<-*
Ms++qL +++ k
gi|1539715 2486 MSIKQLVDLFVK 2497
efhand_2: domain 1 of 2, from 2525 to 2549: score 1.4, E = 7.8
*->LedKYRYlFsqisdsnglldqrkLglL<-*
+KY lF+ i++ +g++d + ++L
gi|1539715 2525 -SEKYNRLFREIAS-AGVVDAKATEQL 2549
UPF0556: domain 1 of 2, from 2570 to 2584: score 1.0, E = 5.4
*->LsKLvlvArtrhdEL<-*
LsKLvlvA+ +
gi|1539715 2570 LSKLVLVAKQLENDG 2584
BRCA-2_helical: domain 1 of 1, from 2576 to 2594: score -0.2, E = 9.1
CS --S-HHHH......HHHHHH
*->DlvakLhsDGGlkvARdlqe<-*
+ +L++DG + vAR l e
gi|1539715 2576 -VAKQLENDGQVGVARQLLE 2594
Drf_DAD: domain 2 of 3, from 2587 to 2601: score 3.8, E = 8.8
*->GvmDsLLEALqsGaA<-*
Gv LLE + s aA
gi|1539715 2587 GVARQLLEKMYSAAA 2601
PilS: domain 1 of 2, from 2614 to 2630: score 0.4, E = 9.7
*->ssdastEqsNiqtiatn<-*
+++as+ +s +++i+++
gi|1539715 2614 KANASKLLSSLAAIHAK 2630
PS_pyruv_trans: domain 1 of 2, from 2633 to 2710: score 1.1, E = 3.7
*->ifdvrlgvtadaleeaerkyviateakalqkiaettdvllpfenrdd
++d++ +v +++le++++ v++ + k + +a+ ++vll++++ +
gi|1539715 2633 MHDTSMKVWQEKLEGKQALTVNGVVEKITDASANGKPVLLELDAPGH 2679
revakaiikassfpdryhivleehdpeellsflasad<-*
++a a+++ dr v++++dp++++ +++sa+
gi|1539715 2680 AMAAWAKGSGD---DR---VYGFYDPNAGIVEFSSAE 2710
Pyridox_oxidase: domain 1 of 2, from 2640 to 2664: score 3.5, E = 2
CS EETTCBSSGGSSEEEEEEEEEEEESHHH
*->dwpevgkdgflrrqvrieGrAeivtdge<-*
+w e +++ + ++++G++e++td+
gi|1539715 2640 VWQE---KLEGKQALTVNGVVEKITDAS 2664
EspB: domain 1 of 1, from 2643 to 2665: score -1.2, E = 4.8
*->mntiDynnqviavnsvsesttgsas<-*
++ q+++vn v+e t++++
gi|1539715 2643 -EKLE-GKQALTVNGVVEKITDASA 2665
DUF1112: domain 1 of 2, from 2649 to 2660: score 2.0, E = 2.7
*->gtaMTvddvVtKT<-*
+a+Tv++vV K+
gi|1539715 2649 -QALTVNGVVEKI 2660
Glyco_hydro_20: domain 1 of 2, from 2670 to 2685: score 2.9, E = 3.1
CS EEEE---SSS-HHHHH
*->VIPEIDmPGHarAalk<-*
V+ E+D PGHa Aa++
gi|1539715 2670 VLLELDAPGHAMAAWA 2685
Peptidase_C58: domain 1 of 2, from 2678 to 2727: score 7.9, E = 0.082
CS EEEEEEEEE.TTE .EEEEETTTEEEEEETTT......HHHHHHH
*->gHavAasvdPggk...gvtFFDPNfGEftfpskesFskwfladlfkk
gHa+Aa + g+++++ + F DPN G + f+s e+F ++++ ++ k+
gi|1539715 2678 GHAMAAWAK-GSGddrVYGFYDPNAGIVEFSSAEKFGDYLTRFFGKS 2723
CS HHHH
layr<-*
+ ++
gi|1539715 2724 DLNM 2727
FLILHELTA: domain 1 of 2, from 2693 to 2729: score 1.3, E = 10
*->wylFHyCkyldliPgtwLPswlgdynsaldkGverfdralekkVGwd
+y F+ P +++ ++ +e+f+ +l ++ G+
gi|1539715 2693 VYGFYD-------PNAGIVEF---------SSAEKFGDYLTRFFGKS 2723
gfedqd<-*
+++++
gi|1539715 2724 DLNMAQ 2729
SpoIIE: domain 1 of 2, from 2693 to 2709: score 0.1, E = 8.9
*->lyavyDpetgtleyanA<-*
+y+ yDp+ g +e+++A
gi|1539715 2693 VYGFYDPNAGIVEFSSA 2709
DUF2002: domain 1 of 2, from 2706 to 2724: score 0.5, E = 8
*->FSSRilLlryLnrlFGDEKtd<-*
FSS + yL r F K d
gi|1539715 2706 FSSAEKFGDYLTRFF--GKSD 2724
Viral_Hsp90: domain 1 of 1, from 2708 to 2724: score 2.3, E = 1.9
*->nsrsvgdlfstffgksD<-*
+ + +gd + +ffgksD
gi|1539715 2708 SAEKFGDYLTRFFGKSD 2724
Vsr: domain 1 of 1, from 2787 to 2802: score 1.9, E = 5.3
CS XSSXHH.. .HHHHHH
*->sDvltpPL..nakRskv<-*
+Dvl++ L++n+kR+ +
gi|1539715 2787 TDVLDT-LsgNEKRKEN 2802
EspF: domain 1 of 1, from 2837 to 2854: score 1.3, E = 5.5
*->RPLPDvAqRLvqHLAEHG<-*
R + D+ q L+ H E G
gi|1539715 2837 RKIGDITQTLLDHAVENG 2854
TEBP_beta: domain 1 of 1, from 2879 to 2888: score -1.6, E = 5.4
CS XXXXXXXXXX
*->sAGKAsAtsG<-*
s G sAtsG
gi|1539715 2879 SEGETSATSG 2888
PGAP1: domain 1 of 1, from 2885 to 2902: score 0.8, E = 6.4
*->elsGiPVLFIPGldfNaGSyk<-*
sG +VLF++G ++ S +
gi|1539715 2885 ATSGKVVLFLHG---SGSSAE 2902
Abhydrolase_1: domain 1 of 1, from 2917 to 3027: score 21.4, E = 1e-05
CS CEEEEECTTTSTTSSEE..GGCCGGGSHHHHHHHHHHHHHHHCTSSE
*->fdvialDlrGfGqSsrpkrgapdladyrfddlaedlealldalgldk
d +a++lrG+G+S+ + + + + d+ ++++l+ g+d
gi|1539715 2917 IDMLAVNLRGYGESD-G----GPSEKGLYQDARTMFNYLVNDKGIDP 2958
CS E EEEEEETHHHHHH HHHHHHCGGTCEEEEEEESSS HH
p.vnlvGhSmGGlia...layaakypelrvkalvlvgtv.........lp
++++ G+SmGG ia + ++yaa+ ++ v++l l+ ++++ ++ + ++
gi|1539715 2959 SnIIIHGYSMGGPIAadlARYAAQNGQ-AVSGLLLDRPMpsmtkaitaHE 3007
CS HCHCSTCHHHH HHHHHHHH
aglssplvprl.gnleglla<-*
++ ++ +v ++ + +g+++
gi|1539715 3008 VANPAGIVGAIaKAVNGQFS 3027
Abhydrolase_3: domain 1 of 1, from 2940 to 2992: score 5.0, E = 0.5
CS HHHHHHHHHHHHHTH.........H.HHTEEEEEEEEEEETHHHHHH
*->idDayaAlrWlaehavgsggeddpwlelgaDpsriavaGDSAGGNLA
+ Da + + +l+ g+Dps+i + G S GG +A
gi|1539715 2940 YQDARTMFNYLVNDK-------------GIDPSNIIIHGYSMGGPIA 2973
CS HHHH.HHHHHCTSS-...........EEEEEE
aavAqlrardrGgplaeldpdlspvrpagqvL<-*
a +A a + +g++ ++g++L
gi|1539715 2974 ADLA-RYAAQ-NGQA-----------VSGLLL 2992
Gp_dh_N: domain 1 of 1, from 2946 to 2962: score 0.4, E = 1.8
CS EETTTSGGGGGTTTTSEEE
*->TfVyGVNhddYdpekhkiV<-*
+f+y VN+ +dp+ +i+
gi|1539715 2946 MFNYLVNDKGIDPS--NII 2962
OmpA: domain 1 of 1, from 2948 to 2973: score 3.9, E = 2.4
*->dyLvskgGvpadrisavGyGeskPva<-*
+yLv+ G+++++i Gy + P+a
gi|1539715 2948 NYLVNDKGIDPSNIIIHGYSMGGPIA 2973
Abhydrolase_2: domain 1 of 1, from 2953 to 2970: score 2.5, E = 3
*->ktGkeALEeLIleLeIpssrIiiGGFSQGg<-*
++G I++s+Iii G S+Gg
gi|1539715 2953 DKG------------IDPSNIIIHGYSMGG 2970
Thioesterase: domain 1 of 1, from 2965 to 2992: score 2.4, E = 2.4
CS EETTHHHHHHHHHHHHHHT---T--CEEEEE
*->GhSmGGllAfEvArrLerrqdgGeepagLil<-*
G+SmGG +A +Ar ++ G +++gL l
gi|1539715 2965 GYSMGGPIAADLARYAAQN---GQAVSGLLL 2992
Staph_haemo: domain 1 of 1, from 3092 to 3106: score 3.0, E = 5.3
*->MsklaeAIakaVqAg<-*
s+l++A ++aV+Ag
gi|1539715 3092 VSGLFNAEQAAVEAG 3106
Peptidase_M56: domain 2 of 2, from 3107 to 3124: score 3.1, E = 2
*->aVLarlpkneRkeYgetLL<-*
+VL++l+k +k+Yg++L
gi|1539715 3107 EVLKGLEK-DFKRYGDALK 3124
PsbR: domain 2 of 2, from 3132 to 3169: score 5.4, E = 0.46
*->sggkKvktdkpyleGiddPtvqqnlkGigggmklkngVD<-*
++k + t+k +l+G + + + G m++k+ VD
gi|1539715 3132 -KAKDIRTTKDFLNGYKNDHAKDIVDGFRSDMSIKQLVD 3169
DUF383: domain 1 of 1, from 3156 to 3174: score 0.9, E = 7.8
*->dlkrsantidqLmdaFvks<-*
d +rs+ i qL+d+Fvk+
gi|1539715 3156 DGFRSDMSIKQLVDLFVKG 3174
Nif11: domain 2 of 2, from 3162 to 3173: score 2.8, E = 6.8
*->MseeqLkaFLak<-*
Ms++qL +++ k
gi|1539715 3162 MSIKQLVDLFVK 3173
efhand_2: domain 2 of 2, from 3201 to 3225: score 1.4, E = 7.8
*->LedKYRYlFsqisdsnglldqrkLglL<-*
+KY lF+ i++ +g++d + ++L
gi|1539715 3201 -SEKYNRLFREIAS-AGVVDAKATEQL 3225
UPF0556: domain 2 of 2, from 3246 to 3260: score 1.0, E = 5.4
*->LsKLvlvArtrhdEL<-*
LsKLvlvA+ +
gi|1539715 3246 LSKLVLVAKQLENDG 3260
Drf_DAD: domain 3 of 3, from 3263 to 3277: score 3.8, E = 8.8
*->GvmDsLLEALqsGaA<-*
Gv LLE + s aA
gi|1539715 3263 GVARQLLEKMYSAAA 3277
PilS: domain 2 of 2, from 3290 to 3306: score 0.4, E = 9.7
*->ssdastEqsNiqtiatn<-*
+++as+ +s +++i+++
gi|1539715 3290 KANASKLLSSLAAIHAK 3306
PS_pyruv_trans: domain 2 of 2, from 3309 to 3386: score 1.1, E = 3.7
*->ifdvrlgvtadaleeaerkyviateakalqkiaettdvllpfenrdd
++d++ +v +++le++++ v++ + k + +a+ ++vll++++ +
gi|1539715 3309 MHDTSMKVWQEKLEGKQALTVNGVVEKITDASANGKPVLLELDAPGH 3355
revakaiikassfpdryhivleehdpeellsflasad<-*
++a a+++ dr v++++dp++++ +++sa+
gi|1539715 3356 AMAAWAKGSGD---DR---VYGFYDPNAGIVEFSSAE 3386
Pyridox_oxidase: domain 2 of 2, from 3316 to 3340: score 3.5, E = 2
CS EETTCBSSGGSSEEEEEEEEEEEESHHH
*->dwpevgkdgflrrqvrieGrAeivtdge<-*
+w e +++ + ++++G++e++td+
gi|1539715 3316 VWQE---KLEGKQALTVNGVVEKITDAS 3340
DUF1112: domain 2 of 2, from 3325 to 3336: score 2.0, E = 2.7
*->gtaMTvddvVtKT<-*
+a+Tv++vV K+
gi|1539715 3325 -QALTVNGVVEKI 3336
Glyco_hydro_20: domain 2 of 2, from 3346 to 3361: score 2.9, E = 3.1
CS EEEE---SSS-HHHHH
*->VIPEIDmPGHarAalk<-*
V+ E+D PGHa Aa++
gi|1539715 3346 VLLELDAPGHAMAAWA 3361
Peptidase_C58: domain 2 of 2, from 3354 to 3403: score 5.9, E = 0.29
CS EEEEEEEEE.TTE .EEEEETTTEEEEEETTT......HHHHHHH
*->gHavAasvdPggk...gvtFFDPNfGEftfpskesFskwfladlfkk
gHa+Aa + g+++++ + F DPN G + f+s e+F +++ ++ k+
gi|1539715 3354 GHAMAAWAK-GSGddrVYGFYDPNAGIVEFSSAEKFGAYLTRFFGKS 3399
CS HHHH
layr<-*
+ ++
gi|1539715 3400 DLNM 3403
FLILHELTA: domain 2 of 2, from 3369 to 3405: score 1.0, E = 12
*->wylFHyCkyldliPgtwLPswlgdynsaldkGverfdralekkVGwd
+y F+ P +++ ++ +e+f+ +l ++ G+
gi|1539715 3369 VYGFYD-------PNAGIVEF---------SSAEKFGAYLTRFFGKS 3399
gfedqd<-*
+++++
gi|1539715 3400 DLNMAQ 3405
SpoIIE: domain 2 of 2, from 3369 to 3385: score 0.1, E = 8.9
*->lyavyDpetgtleyanA<-*
+y+ yDp+ g +e+++A
gi|1539715 3369 VYGFYDPNAGIVEFSSA 3385
DUF2002: domain 2 of 2, from 3382 to 3400: score 0.3, E = 9.5
*->FSSRilLlryLnrlFGDEKtd<-*
FSS + yL r F K d
gi|1539715 3382 FSSAEKFGAYLTRFF--GKSD 3400
ADC_lyase: domain 1 of 1, from 3486 to 3493: score -0.2, E = 8.2
*->HNraVrkY<-*
HN++V+ +
gi|1539715 3486 HNQNVNDW 3493
SPOR: domain 1 of 1, from 3523 to 3555: score 3.2, E = 2.7
CS HHHHHHHHHTTT--...EEEEEETTEEEEEESS
*->AealaakLrakGfaayvavvsgggtlYRVrvGp<-*
A ++aa+L++k++++ v+v ++ YRV++G+
gi|1539715 3523 AAKAAANLAGKHPESSVVVQLDSDGNYRVVYGD 3555
FTP: domain 2 of 2, from 3537 to 3557: score 3.5, E = 4.1
*->geliVhvskdGkvksvsGdfs<-*
++++V +++dG + v+Gd s
gi|1539715 3537 SSVVVQLDSDGNYRVVYGDPS 3557
ChaB: domain 1 of 1, from 3661 to 3675: score 1.8, E = 8.2
*->rkYvklNngrWvpra<-*
rk +k+ ng Wv +a
gi|1539715 3661 RKHTKDANGNWVQKA 3675
TraH_2: domain 1 of 1, from 3706 to 3713: score 1.2, E = 1.8
*->IDLSgIGa<-*
IDLS+IG
gi|1539715 3706 IDLSRIGI 3713
Adeno_shaft: domain 4 of 4, from 3755 to 3765: score 0.2, E = 70
CS S--EEE-B-TT
*->nnsLtlntgpG<-*
++++ +n+g+G
gi|1539715 3755 SGNIQVNVGDG 3765
Hep_Hag: domain 1 of 2, from 3783 to 3796: score 3.4, E = 9.2
CS ECSTT-EEESTT-E
*->AtganStAiGsnak<-*
+ g++S+A+G+n++
gi|1539715 3783 TGGFKSLAFGDNNV 3796
Autotransporter: domain 2 of 2, from 3790 to 3827: score 1.8, E = 4.1
CS C CS--SSEEEEEEEEEEEEEE-SS-EEE....EEEEEEEEEEEEEE
*->p.gdngvWarglggrlkytdssggingfrfqtesrsgGlqlGidtkl
gdn+v + + +g++k +s +i+g++ ++ G+++++
gi|1539715 3790 AfGDNNVMIHIGNGESK---HSFDIGGYQ---------ALEGAQMFI 3824
CS ..ETT
tdgdg<-*
g++
gi|1539715 3825 --GNR 3827
RtxA: domain 48 of 48, from 3790 to 3807: score 4.4, E = 4.2
*->GaGgaNvitkvGdggdlaf<-*
+ G Nv+ ++G +g++ +
gi|1539715 3790 AFGDNNVMIHIG-NGESKH 3807
Enhancin: domain 1 of 1, from 3843 to 3855: score -0.4, E = 8.6
*->msktleipvlplP<-*
m k++++p+l +P
gi|1539715 3843 MDKSIPTPPLVNP 3855
GET2: domain 1 of 1, from 4005 to 4011: score -0.8, E = 9.2
*->lfGLlsy<-*
lfGL+++
gi|1539715 4005 LFGLMTQ 4011
DNA_mis_repair: domain 1 of 1, from 4075 to 4098: score 4.3, E = 1.1
CS HHHHHCCE..EEEEEEET...TCCCCCCC
*->GdavaknllPlpiekedgraidfkisgfl<-*
G a++k++ l++ e++ ++++++f+
gi|1539715 4075 GVAILKEM--LEVIGEFS---GDQLQAFV 4098
ThiS: domain 1 of 1, from 4141 to 4158: score -0.0, E = 9.4
CS EEETTECCHHHTSCEEEEESSTSBHHH
*->vllfaelrelageeeeielpegaTvae<-*
v l++e+ + gaTva+
gi|1539715 4141 VSLNGEILNSTQ---------GATVAD 4158
MH1: domain 1 of 1, from 4187 to 4210: score 0.7, E = 9.9
*->ekwlekavesLlKKLKkkkqqleeLl<-*
++ ++k +sL+ LK++ + +Ll
gi|1539715 4187 SQDKQKEMKSLVANLKENL--TADLL 4210
HemolysinCabind: domain 3 of 8, from 4261 to 4278: score 6.1, E = 1.1
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G+D+ y ++ +++
gi|1539715 4261 WGGRGDDVFYATGTSNIF 4278
PalH: domain 1 of 1, from 4265 to 4276: score 0.9, E = 3.2
*->GdDmlfvdptsn<-*
GdD++ +++tsn
gi|1539715 4265 GDDVFYATGTSN 4276
HemolysinCabind: domain 4 of 8, from 4279 to 4285: score 1.8, E = 22
CS E--SSS-
*->yGGaGnD<-*
+GG+GnD
gi|1539715 4279 TGGEGND 4285
HemolysinCabind: domain 5 of 8, from 4297 to 4304: score 4.0, E = 4.9
CS E--SSS-E
*->yGGaGnDt<-*
+GG+GnDt
gi|1539715 4297 FGGDGNDT 4304
Hep_Hag: domain 2 of 2, from 4344 to 4367: score 0.7, E = 50
CS ESTT-EE -STTEEEESTTTE
*->iGsnakA....sgensvAlGgnal<-*
+G+ ++++++++ ++sv +G+n++
gi|1539715 4344 SGNFNRVdtgdDQDYSVTIGNNNQ 4367
DUF1655: domain 1 of 1, from 4361 to 4372: score 1.8, E = 9.4
*->flgNgyQVEliea<-*
++gN QVEl a
gi|1539715 4361 TIGNNNQVEL-GA 4372
DUF1554: domain 1 of 1, from 4380 to 4390: score 0.9, E = 7.6
*->fGsanttssni<-*
fG++n++++ +
gi|1539715 4380 FGNYNRINASA 4390
HemolysinCabind: domain 6 of 8, from 4384 to 4395: score 0.8, E = 47
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
++++ aGnD+
gi|1539715 4384 NRINASAGNDVV 4395
HemolysinCabind: domain 7 of 8, from 4403 to 4413: score 2.4, E = 15
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+Gg+G D l
gi|1539715 4403 VLNGGEGEDHL 4413
HemolysinCabind: domain 8 of 8, from 4425 to 4442: score 2.3, E = 16
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G+D + g+ +t+
gi|1539715 4425 NGGEGRDLMVLGGYQNTF 4442
Mad3_BUB1_II: domain 1 of 1, from 4491 to 4506: score 3.6, E = 2.8
*->KIpiFrDslsdadqAk<-*
K++i rD +sd dqAk
gi|1539715 4491 KLSILRDPASDSDQAK 4506
Str_synth: domain 1 of 1, from 4523 to 4537: score 4.5, E = 1.9
*->rGrqviaamlegdktG<-*
r qvi+am+e+d+tG
gi|1539715 4523 R-AQVIIAMGEKDATG 4537
Terminase_1: domain 1 of 1, from 4549 to 4560: score 0.3, E = 2.9
*->ImAlgrAlyaee<-*
I+Al +A+++++
gi|1539715 4549 IDALVQAMSGFD 4560
DUF2019: domain 1 of 1, from 4557 to 4573: score 6.3, E = 0.23
*->SkwfPQaGdAgmslrnLd<-*
S++ PQaGd g ++nLd
gi|1539715 4557 SGFDPQAGDNGF-IDNLD 4573
EAL: domain 1 of 1, from 4565 to 4595: score -0.1, E = 9.1
*->Drsfirdrdidrqdpesrallrslidlarelgikv<-*
D fi ++d ++++ a+ ++++d+ ++ gi+v
gi|1539715 4565 DNGFI--DNLD--SKSRVAITTAWADVVHKKGITV 4595
//