hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 158334350.fa
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Query sequence: gi|158334350|ref|YP_001515522.1|
Accession: [none]
Description: hypothetical protein AM1_1171 [Acaryochloris marina MBIC11017]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
DUF932 Domain of unknown function (DUF932) 1.7 2 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF932 1/1 97 109 .. 264 276 .] 1.7 2
Alignments of top-scoring domains:
DUF932: domain 1 of 1, from 97 to 109: score 1.7, E = 2
*->LWvLAEemrelKa<-*
LWv A+ r++++
gi|1583343 97 LWVYADDIRQWRS 109
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