hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            158337218.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: gi|158337218|ref|YP_001518393.1|
Accession:      [none]
Description:    hypothetical protein AM1_4095 [Acaryochloris marina MBIC11017]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
HopJ            HopJ type III effector protein            2.1        3.1   1
DUF2527         Protein of unknown function (DUF2627)     2.4        3.9   1
Transp_cyt_pur  Permease for cytosine/purines, uracil     1.1        4.9   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
HopJ              1/1       1    13 [.     1    13 [.     2.1      3.1
Transp_cyt_pur    1/1     164   182 ..     1    21 [.     1.1      4.9
DUF2527           1/1     198   210 ..     1    15 [.     2.4      3.9

Alignments of top-scoring domains:
HopJ: domain 1 of 1, from 1 to 13: score 2.1, E = 3.1
                   *->MtlensdvsdLla<-*
                      M+ +++++s Ll+
  gi|1583372     1    MSKSQVNISSLLN    13

Transp_cyt_pur: domain 1 of 1, from 164 to 182: score 1.1, E = 4.9
                   *->PVpeDeeRtwktrnlfsfWlg<-*
                      PV+e  +R ++t++l+sf +g
  gi|1583372   164    PVGE--ARQGGTWQLASFFGG    182

DUF2527: domain 1 of 1, from 198 to 210: score 2.4, E = 3.9
                   *->mCGiFsKEvLsKdvd<-*
                        GiF  EvLsK vd
  gi|1583372   198    -AGIFT-EVLSKSVD    210

//