hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            158340431.fa
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Query sequence: gi|158340431|ref|YP_001521788.1|
Accession:      [none]
Description:    hypothetical protein AM1_C0359 [Acaryochloris marina MBIC11017]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
DUF2247         Uncharacterized protein conserved in      4.5       0.62   1
DUF1501         Protein of unknown function (DUF1501)     4.4       0.65   1
WzyE            WzyE protein                              1.6       0.99   1
DUF697          Family of unknown function (DUF697)       0.3        9.8   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
WzyE              1/1      62    75 ..     1    16 [.     1.6     0.99
DUF1501           1/1      69    84 ..     1    18 [.     4.4     0.65
DUF2247           1/1     101   115 ..   148   162 .]     4.5     0.62
DUF697            1/1     124   140 ..     1    17 [.     0.3      9.8

Alignments of top-scoring domains:
WzyE: domain 1 of 1, from 62 to 75: score 1.6, E = 0.99
                   *->msLlqFsGLFvvyLla<-*
                        L qF GL +++L++
  gi|1583404    62    --LSQFEGLSCLHLIC    75

DUF1501: domain 1 of 1, from 69 to 84: score 4.4, E = 0.65
                   *->AKrVIfLfmaGGPSqlDt<-*
                        ++ +L + GGP++l++
  gi|1583404    69    --SCLHLICKGGPDHLEL    84

DUF2247: domain 1 of 1, from 101 to 115: score 4.5, E = 0.62
                   *->ynnWksYLkqessef<-*
                      +++W++YL +++  f
  gi|1583404   101    ICQWQDYLTEGAEIF    115

DUF697: domain 1 of 1, from 124 to 140: score 0.3, E = 9.8
                   *->srlwkwflgallglfsl<-*
                      srl++ f+++l++l+++
  gi|1583404   124    SRLGQAFVSWLGLLIGA    140

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