hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 158341502.fa
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Query sequence: gi|158341502|ref|YP_001522667.1|
Accession: [none]
Description: FG-GAP repeat-containing protein [Acaryochloris marina MBIC11017]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
FG-GAP FG-GAP repeat 458.0 1.4e-134 20
HemolysinCabind Hemolysin-type calcium-binding repeat 58.4 1.5e-16 4
Calx-beta Calx-beta domain 23.6 1.1e-05 1
Dockerin_1 Dockerin type I repeat 11.8 0.017 6
Nucleo_LEF-12 Nucleopolyhedrovirus LEF-12 protein 8.0 0.062 2
Peptidase_C10 Peptidase C10 family 5.2 0.32 3
NHL NHL repeat 8.1 0.51 2
VWD von Willebrand factor type D domain 4.3 0.56 2
3HBOH 3HB-oligomer hydrolase (3HBOH) 1.0 2.4 1
Hydrolase haloacid dehalogenase-like hydrolase 2.6 2.5 1
FliD_C Flagellar hook-associated protein 2 C 2.6 2.9 1
PNPOx_C Pyridoxine 5'-phosphate oxidase C-ter 1.2 3.1 1
HlyD HlyD family secretion protein 2.4 3.2 1
HCBP_related Haemolysin-type calcium binding prote 4.0 3.3 1
Phi-29_GP3 Phi-29 DNA terminal protein GP3 0.4 4 1
Podoplanin Podoplanin 0.7 4.1 1
EF_assoc_1 EF hand associated 3.1 4.2 1
Corona_NS4 Coronavirus non-structural protein NS 1.9 4.2 1
Trp_leader2 Tryptophan operon leader peptide 1.6 4.5 1
Intimin_C Intimin C-type lectin domain 1.8 5.1 1
Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc -0.1 6 1
Endotoxin_mid Bacillus thuringiensis delta-Endotoxi 0.3 6.5 1
DDR Diol dehydratase / glycerol dehydrata -1.3 6.8 1
Pertussis_S1 Pertussis toxin, subunit 1 -0.2 6.9 1
FlgD Flagellar hook capping protein 1.1 7 1
Phage_GPO Phage capsid scaffolding protein (GPO -1.4 7.1 1
S-AdoMet_synt_C S-adenosylmethionine synthetase, C-te 0.1 7.4 1
DUF1974 Domain of unknown function (DUF1974) -1.2 8.8 1
DnaB_bind DnaB-helicase binding domain of prima 3.2 8.9 1
RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 -0.3 9.2 1
DUF1505 Protein of unknown function (DUF1505) 0.7 9.5 1
PP2C Protein phosphatase 2C -0.0 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
HlyD 1/1 16 42 .. 295 321 .] 2.4 3.2
Fuc4NAc_transf 1/1 96 107 .. 348 363 .] -0.1 6
DnaB_bind 1/1 115 140 .. 34 59 .] 3.2 8.9
Pertussis_S1 1/1 155 164 .. 230 239 .] -0.2 6.9
FG-GAP 1/20 201 231 .. 1 36 [] 24.1 4.7e-06
Intimin_C 1/1 217 230 .. 87 103 .. 1.8 5.1
FG-GAP 2/20 250 280 .. 1 36 [] 27.9 3.8e-07
FG-GAP 3/20 299 329 .. 1 36 [] 27.5 4.8e-07
RNA_pol_Rpb1_3 1/1 301 308 .. 239 246 .] -0.3 9.2
Peptidase_C10 1/3 331 349 .. 376 394 .] 3.9 0.72
FG-GAP 4/20 348 378 .. 1 36 [] 28.6 2.3e-07
FG-GAP 5/20 397 427 .. 1 36 [] 28.9 1.8e-07
VWD 1/2 404 420 .. 151 167 .] 2.7 1.7
FG-GAP 6/20 446 476 .. 1 36 [] 20.3 6.2e-05
FG-GAP 7/20 495 525 .. 1 36 [] 28.1 3.2e-07
EF_assoc_1 1/1 545 560 .. 56 71 .. 3.1 4.2
Calx-beta 1/1 551 630 .. 31 109 .] 23.6 1.1e-05
Corona_NS4 1/1 571 593 .. 1 23 [. 1.9 4.2
Endotoxin_mid 1/1 582 619 .. 54 90 .. 0.3 6.5
FlgD 1/1 626 658 .. 1 31 [. 1.1 7
FG-GAP 8/20 669 699 .. 1 36 [] 29.5 1.3e-07
FG-GAP 9/20 718 748 .. 1 36 [] 20.7 4.6e-05
VWD 2/2 725 741 .. 151 167 .] 1.6 3.6
Peptidase_C10 2/3 750 768 .. 376 394 .] 0.4 6.3
FG-GAP 10/20 767 797 .. 1 36 [] 27.4 5.2e-07
FG-GAP 11/20 816 846 .. 1 36 [] 20.4 5.6e-05
Trp_leader2 1/1 822 841 .. 1 21 [. 1.6 4.5
PP2C 1/1 831 843 .. 291 303 .] -0.0 10
FG-GAP 12/20 865 894 .. 1 36 [] 27.9 3.8e-07
S-AdoMet_synt_C 1/1 905 939 .. 66 101 .. 0.1 7.4
FG-GAP 13/20 913 943 .. 1 36 [] 14.8 0.0025
DUF1974 1/1 915 922 .. 281 288 .] -1.2 8.8
Peptidase_C10 3/3 945 963 .. 376 394 .] 0.9 4.4
FG-GAP 14/20 962 992 .. 1 36 [] 27.5 5e-07
Dockerin_1 1/6 970 976 .. 1 7 [. 0.5 52
NHL 1/2 999 1014 .. 7 24 .. 3.4 9.9
FliD_C 1/1 1015 1044 .. 1 30 [. 2.6 2.9
HemolysinCabind 1/4 1068 1085 .. 1 18 [] 5.3 1.9
HemolysinCabind 2/4 1086 1103 .. 1 18 [] 17.8 0.00031
Podoplanin 1/1 1088 1110 .. 43 65 .. 0.7 4.1
Phage_GPO 1/1 1096 1106 .. 279 290 .] -1.4 7.1
FG-GAP 15/20 1139 1168 .. 1 36 [] 19.9 8e-05
Dockerin_1 2/6 1147 1157 .. 1 11 [. 1.1 35
DDR 1/1 1152 1190 .. 1 39 [. -1.3 6.8
Nucleo_LEF-12 1/2 1193 1205 .. 1 13 [. 4.0 0.83
FG-GAP 16/20 1195 1224 .. 1 36 [] 18.3 0.00024
Dockerin_1 3/6 1203 1208 .. 1 6 [. 0.9 38
Nucleo_LEF-12 2/2 1249 1261 .. 1 13 [. 4.0 0.83
FG-GAP 17/20 1251 1280 .. 1 36 [] 18.3 0.00024
Dockerin_1 4/6 1259 1264 .. 1 6 [. 0.9 38
FG-GAP 18/20 1307 1336 .. 1 36 [] 22.1 1.9e-05
Dockerin_1 5/6 1315 1325 .. 1 11 [. 5.2 1.9
PNPOx_C 1/1 1357 1366 .. 40 57 .] 1.2 3.1
FG-GAP 19/20 1363 1392 .. 1 36 [] 19.2 0.00013
Dockerin_1 6/6 1371 1381 .. 1 11 [. 3.1 8
Hydrolase 1/1 1374 1396 .. 162 184 .] 2.6 2.5
HCBP_related 1/1 1395 1405 .. 43 53 .] 4.0 3.3
FG-GAP 20/20 1425 1453 .. 1 36 [] 6.8 0.54
3HBOH 1/1 1440 1454 .. 707 721 .] 1.0 2.4
HemolysinCabind 3/4 1459 1471 .. 6 18 .] 13.8 0.0052
HemolysinCabind 4/4 1472 1489 .. 1 18 [] 21.5 2.4e-05
Phi-29_GP3 1/1 1493 1507 .. 136 150 .. 0.4 4
DUF1505 1/1 1519 1530 .. 117 128 .] 0.7 9.5
NHL 2/2 1529 1551 .. 7 30 .] 4.7 4.5
Alignments of top-scoring domains:
HlyD: domain 1 of 1, from 16 to 42: score 2.4, E = 3.2
CS ---------------------------
*->lpVeigldpGafnqsttplvpGevviv<-*
+ V i++++ a ++ +++pG++v+v
gi|1583415 16 RLVIIDPTIDAPQHLINGVLPGTSVVV 42
Fuc4NAc_transf: domain 1 of 1, from 96 to 107: score -0.1, E = 6
*->lkgWqqaLaiAagEva<-*
l++W+++L gE a
gi|1583415 96 LQQWRSLL----GEAA 107
DnaB_bind: domain 1 of 1, from 115 to 140: score 3.2, E = 8.9
*->kIpdpvlRdlllqeLaeklGiddeal<-*
+++++ l ++ +q+L+++lG+ +a
gi|1583415 115 QVAAGELGQQFVQRLSQLLGTGIAAN 140
Pertussis_S1: domain 1 of 1, from 155 to 164: score -0.2, E = 6.9
CS EEEHHHHSS-
*->LvYyesidyS<-*
L+Y s+++S
gi|1583415 155 LSYEQSPAWS 164
FG-GAP: domain 1 of 20, from 201 to 231: score 24.1, E = 4.7e-06
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+++sv++gD+nGD pDlv+ ++ ++v++l
gi|1583415 201 NPASVSLGDFNGDSQPDLVT-------ANiLiNNVSVL 231
Intimin_C: domain 1 of 1, from 217 to 230: score 1.8, E = 5.1
CS ETTTEEEE.E...EEES
*->DLVtkNpltNnGkkVnv<-*
DLVt N+l+N +V+v
gi|1583415 217 DLVTANILIN---NVSV 230
FG-GAP: domain 2 of 20, from 250 to 280: score 27.9, E = 3.8e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
f+ sv++gD+nGD ++Dl+v a++++++ v++l
gi|1583415 250 FPNSVSVGDFNGDSLADLAV----ANQISnN--VSVL 280
FG-GAP: domain 3 of 20, from 299 to 329: score 27.5, E = 4.8e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ sv++gD+nGD ++Dl+v +t+++++v++l
gi|1583415 299 RPFSVSIGDFNGDSLADLAV-------ATpAsNNVSVL 329
RNA_pol_Rpb1_3: domain 1 of 1, from 301 to 308: score -0.3, E = 9.2
CS BB--GGGC
*->FSiGigDi<-*
FS++igD
gi|1583415 301 FSVSIGDF 308
Peptidase_C10: domain 1 of 3, from 331 to 349: score 3.9, E = 0.72
CS --------TT-EEEE----
*->GaGdGGystdQevVvGIkP<-*
G G GG+s vGI P
gi|1583415 331 GDGSGGFSSQTTFAVGITP 349
FG-GAP: domain 4 of 20, from 348 to 378: score 28.6, E = 2.3e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
++ sv++gD+nGD pDlv+ ++ d+++v++l
gi|1583415 348 TPFSVSVGDFNGDSQPDLVT-------ANfDsNNVSVL 378
FG-GAP: domain 5 of 20, from 397 to 427: score 28.9, E = 1.8e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
++ssv++gD+nGD +Dlv+ +++++++v++l
gi|1583415 397 NPSSVSVGDFNGDSQADLVT-------ANnGsNNVSVL 427
VWD: domain 1 of 2, from 404 to 420: score 2.7, E = 1.7
*->GnfdgepedDfrtpdGs<-*
G f+g+++ D++t+++
gi|1583415 404 GDFNGDSQADLVTANNG 420
FG-GAP: domain 6 of 20, from 446 to 476: score 20.3, E = 6.2e-05
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ sv++gD+nGD +Dlv+ + ++++v++l
gi|1583415 446 DPFSVSVGDFNGDSQADLVT-------MNfAsNNVSVL 476
FG-GAP: domain 7 of 20, from 495 to 525: score 28.1, E = 3.2e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+++s+++gD+nGD +Dl+v +++++++v++l
gi|1583415 495 NPASISVGDFNGDSQADLAV-------ANsSsNNVSVL 525
EF_assoc_1: domain 1 of 1, from 545 to 560: score 3.1, E = 4.2
*->GRAgdttsAltVTRkR<-*
G g++t+++tVTR R
gi|1583415 545 GDSGSQTLTFTVTRSR 560
Calx-beta: domain 1 of 1, from 551 to 630: score 23.6, E = 1.1e-05
*->evevcVvrmggapelrrtVtVsyrTeDGTAtaGPgsDYep.......
+ +++V+r + +++ +V++ T GTA G sD++ +++++
gi|1583415 551 TLTFTVTRSRF---IGSVSSVDF-TIAGTAING--SDFTNiggtsga 591
..tegtiLtFgPgedtekcinvtiiDDdvyEgdEnFfvrLs<-*
++t+gt + F +ge t k+i + ++ D +E+ E+ + Ls
gi|1583415 592 ttTSGT-INFAAGE-TSKTITLDVLGDTNFEPQETIAITLS 630
Corona_NS4: domain 1 of 1, from 571 to 593: score 1.9, E = 4.2
*->tPsATTlDGTdYTlIrPssvyTr<-*
t T + G d+T+I +s T+
gi|1583415 571 TIAGTAINGSDFTNIGGTSGATT 593
Endotoxin_mid: domain 1 of 1, from 582 to 619: score 0.3, E = 6.5
CS EE--SS--SEEEEE EEEEEEEEEGGG-B---EE-SSS
*->FPniGGLPGstttq.aLlaARvnYsGGvssgriGaanl<-*
F niGG G+ttt +++++A s ++ +G +n+
gi|1583415 582 FTNIGGTSGATTTSgTINFAAGETSKTITLDVLGDTNF 619
FlgD: domain 1 of 1, from 626 to 658: score 1.1, E = 7
*->mtsvssatgsssasttsasssss..selgkddF<-*
+++ s+at + ++ +a+++s+ +++++ dF
gi|1583415 626 AITLSNATAAVNTTISTATATSTilNDELFADF 658
FG-GAP: domain 8 of 20, from 669 to 699: score 29.5, E = 1.3e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ssv++gD+nGD ++Dl+v +++++++v+++
gi|1583415 669 RPSSVSVGDFNGDSLADLAV-------ANdGsNNVSVF 699
FG-GAP: domain 9 of 20, from 718 to 748: score 20.7, E = 4.6e-05
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ sv++gD+nGD +Dlv+ a+ ++++ v++l
gi|1583415 718 RPFSVSVGDFNGDSQADLVT----ANLISsN--VSVL 748
VWD: domain 2 of 2, from 725 to 741: score 1.6, E = 3.6
*->GnfdgepedDfrtpdGs<-*
G f+g+++ D++t++
gi|1583415 725 GDFNGDSQADLVTANLI 741
Peptidase_C10: domain 2 of 3, from 750 to 768: score 0.4, E = 6.3
CS --------TT-EEEE----
*->GaGdGGystdQevVvGIkP<-*
G G GG+s vG P
gi|1583415 750 GNGSGGFSSQTTFAVGTNP 768
FG-GAP: domain 10 of 20, from 767 to 797: score 27.4, E = 5.2e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+++sv++gD+nGD +Dl+v ++ ++++v++l
gi|1583415 767 NPRSVSVGDFNGDSQADLAV-------ANiGsTNVSVL 797
FG-GAP: domain 11 of 20, from 816 to 846: score 20.4, E = 5.6e-05
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ sv++ D+nGD +Dl+v ++++++++++l
gi|1583415 816 SPISVSVDDFNGDSQADLAV-------ANnSsNNISVL 846
Trp_leader2: domain 1 of 1, from 822 to 841: score 1.6, E = 4.5
*->mLqEFnqnqKAKlAlhlekvn<-*
+ +Fn +A lA+ ++ n
gi|1583415 822 -VDDFNGDSQADLAVANNSSN 841
PP2C: domain 1 of 1, from 831 to 843: score -0.0, E = 10
CS HHHHHHTT--S-E
*->vdeAiargseDni<-*
+d+A+a++s++ni
gi|1583415 831 ADLAVANNSSNNI 843
FG-GAP: domain 12 of 20, from 865 to 894: score 27.9, E = 3.8e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+++sv++gD+nGD +Dl+v ++++++++l
gi|1583415 865 NPRSVSVGDFNGDSQADLAV-------VNgSNNISVL 894
S-AdoMet_synt_C: domain 1 of 1, from 905 to 939: score 0.1, E = 7.4
*->qlsYAiGvaePlsilvdtygtskkseeelveivrkn<-*
q ++A+G ++P s++vd++ +++ +v+ v++n
gi|1583415 905 QTTFAVG-TNPRSVSVDDFNGDSQADLAVVNFVSNN 939
FG-GAP: domain 13 of 20, from 913 to 943: score 14.8, E = 0.0025
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+++sv++ D+nGD +Dl+v + ++++++l
gi|1583415 913 NPRSVSVDDFNGDSQADLAV-------VNfVsNNISVL 943
DUF1974: domain 1 of 1, from 915 to 922: score -1.2, E = 8.8
*->dvIqVDDF<-*
+++ VDDF
gi|1583415 915 RSVSVDDF 922
Peptidase_C10: domain 3 of 3, from 945 to 963: score 0.9, E = 4.4
CS --------TT-EEEE----
*->GaGdGGystdQevVvGIkP<-*
G G GG+s GI P
gi|1583415 945 GDGSGGFSSQTTFATGIDP 963
FG-GAP: domain 14 of 20, from 962 to 992: score 27.5, E = 5e-07
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ sv++gD+nGDG ++++v ++ ++++v++l
gi|1583415 962 DPISVSVGDFNGDGQAEIAV-------ANySsNNVSIL 992
Dockerin_1: domain 1 of 6, from 970 to 976: score 0.5, E = 52
CS -TT-SS-
*->DvNgDGk<-*
D NgDG+
gi|1583415 970 DFNGDGQ 976
NHL: domain 1 of 2, from 999 to 1014: score 3.4, E = 9.9
CS EEE-TTTS-EEEEE-GGG
*->vavdpsdGrvyVaDgsgN<-*
va+d s+ +++++D + N
gi|1583415 999 VALD-SSRNLVITD-RSN 1014
FliD_C: domain 1 of 1, from 1015 to 1044: score 2.6, E = 2.9
*->AqnAeitvdGpngsitvtsatNtvtdvidG<-*
A++ ++t++ +++++t+t ++N +t vi+G
gi|1583415 1015 AKDDNLTLTTDGTNFTLTDPNNLLTHVISG 1044
HemolysinCabind: domain 1 of 4, from 1068 to 1085: score 5.3, E = 1.9
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+GnD+ +G + t+
gi|1583415 1068 NTGGGNDIVSGSSQSETI 1085
HemolysinCabind: domain 2 of 4, from 1086 to 1103: score 17.8, E = 0.00031
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G D L+GgaG+D+l
gi|1583415 1086 NGGLGADLLNGGAGDDVL 1103
Podoplanin: domain 1 of 1, from 1088 to 1110: score 0.7, E = 4.1
*->GtedgvvtPGaEDkvvTtgatee<-*
G++ ++ + Ga D+v T+ga+ +
gi|1583415 1088 GLGADLLNGGAGDDVLTDGASNG 1110
Phage_GPO: domain 1 of 1, from 1096 to 1106: score -1.4, E = 7.1
*->GGggdvavLTdC<-*
GG+gd +vLTd
gi|1583415 1096 GGAGD-DVLTDG 1106
FG-GAP: domain 15 of 20, from 1139 to 1168: score 19.9, E = 8e-05
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ ++ ++D+nGD r+D++ +++++ +++l
gi|1583415 1139 TLFPRQIADVNGDNRADIIG-------FGnSSVAVAL 1168
Dockerin_1: domain 2 of 6, from 1147 to 1157: score 1.1, E = 35
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
DvNgD++ + +
gi|1583415 1147 DVNGDNRADII 1157
DDR: domain 1 of 1, from 1152 to 1190: score -1.3, E = 6.8
*->mkliaGiDiGnsstEvAlakveennevefva.sgivettG<-*
+ i Gnss vAl++++ + + +f+a+ + ++ttG
gi|1583415 1152 -NRADIIGFGNSSVAVALGQADGTFGTAFTAtTAFARTTG 1190
Nucleo_LEF-12: domain 1 of 2, from 1193 to 1205: score 4.0, E = 0.83
*->dkeeFntRLayvk<-*
+ ++F +RLa v+
gi|1583415 1193 NEDQFARRLADVN 1205
FG-GAP: domain 16 of 20, from 1195 to 1224: score 18.3, E = 0.00024
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ +++++D+n+DG++D++ +++++ +++l
gi|1583415 1195 DQFARRLADVNNDGFADIIG-------FGnSSVAVAL 1224
Dockerin_1: domain 3 of 6, from 1203 to 1208: score 0.9, E = 38
CS -TT-SS
*->DvNgDG<-*
DvN+DG
gi|1583415 1203 DVNNDG 1208
Nucleo_LEF-12: domain 2 of 2, from 1249 to 1261: score 4.0, E = 0.83
*->dkeeFntRLayvk<-*
+ ++F +RLa v+
gi|1583415 1249 NEDQFARRLADVN 1261
FG-GAP: domain 17 of 20, from 1251 to 1280: score 18.3, E = 0.00024
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ +++++D+n+DG++D++ +++++ +++l
gi|1583415 1251 DQFARRLADVNNDGFADIIG-------FGnSSVAVAL 1280
Dockerin_1: domain 4 of 6, from 1259 to 1264: score 0.9, E = 38
CS -TT-SS
*->DvNgDG<-*
DvN+DG
gi|1583415 1259 DVNNDG 1264
FG-GAP: domain 18 of 20, from 1307 to 1336: score 22.1, E = 1.9e-05
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
s++++D+nGDGr+D++ +++++ +++l
gi|1583415 1307 DLFSRHVADVNGDGRADIIG-------FGnSSVAVAL 1336
Dockerin_1: domain 5 of 6, from 1315 to 1325: score 5.2, E = 1.9
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
DvNgDG+ + +
gi|1583415 1315 DVNGDGRADII 1325
PNPOx_C: domain 1 of 1, from 1357 to 1366: score 1.2, E = 3.1
*->ggkeskeaekWsieRLaP<-*
+g W+ e L+P
gi|1583415 1357 SG--------WTSEDLYP 1366
FG-GAP: domain 19 of 20, from 1363 to 1392: score 19.2, E = 0.00013
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+++ ++D+nGDG +D++ ++++ +++l
gi|1583415 1363 DLYPRQVADINGDGQADIIG-------FGrSAVAVAL 1392
Dockerin_1: domain 6 of 6, from 1371 to 1381: score 3.1, E = 8
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
D+NgDG+ + +
gi|1583415 1371 DINGDGQADII 1381
Hydrolase: domain 1 of 1, from 1374 to 1396: score 2.6, E = 2.5
CS ESSCHHHHHHHHCTEEEEEESSH
*->GDgvnDapalaaAGvgvamgngg<-*
GDg +D++ + + v+va+g +
gi|1583415 1374 GDGQADIIGFGRSAVAVALGQAD 1396
HCBP_related: domain 1 of 1, from 1395 to 1405: score 4.0, E = 3.3
*->ADGTtWtRadi<-*
ADGT Wt++ +
gi|1583415 1395 ADGTFWTATVV 1405
FG-GAP: domain 20 of 20, from 1425 to 1453: score 6.8, E = 0.54
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
++ ++ ++D+ G+G +D++ ++++ +v++
gi|1583415 1425 NANPRFVADVAGNGQADIIG-------FGnN-QVRVA 1453
3HBOH: domain 1 of 1, from 1440 to 1454: score 1.0, E = 2.4
*->AdaItvaaGaVqVPd<-*
Ad I + +++V+V++
gi|1583415 1440 ADIIGFGNNQVRVAN 1454
HemolysinCabind: domain 3 of 4, from 1459 to 1471: score 13.8, E = 0.0052
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
nD+L GgaGnD+l
gi|1583415 1459 NDSLLGGAGNDRL 1471
HemolysinCabind: domain 4 of 4, from 1472 to 1489: score 21.5, E = 2.4e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GGaGnD L+Gga +D++
gi|1583415 1472 VGGAGNDLLTGGADADRF 1489
Phi-29_GP3: domain 1 of 1, from 1493 to 1507: score 0.4, E = 4
*->spadVtGigRpeDFd<-*
+ a V Gi+R+ DF+
gi|1583415 1493 ANAAVSGINRITDFN 1507
DUF1505: domain 1 of 1, from 1519 to 1530: score 0.7, E = 9.5
*->tAFGaeKLAnIe<-*
+AFG +L++I+
gi|1583415 1519 AAFGITNLSEIT 1530
NHL: domain 2 of 2, from 1529 to 1551: score 4.7, E = 4.5
CS EEE-TTTS-EEEEE-GGGTEEEEE
*->vavdpsdGrvyVaDgsgNhrvqvf<-*
++ ++ +G+++Va ++N+ + +f
gi|1583415 1529 ITFNATTGELFVAG-TYNNTLAIF 1551
//