hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 159040317.fa
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Query sequence: gi|159040317|ref|YP_001539570.1|
Accession: [none]
Description: hypothetical protein Sare_4829 [Salinispora arenicola CNS-205]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Trypan_PARP Procyclic acidic repetitive protein ( 22.8 1.3e-05 3
DUF349 Domain of Unknown Function (DUF349) 12.5 0.0099 1
Pro_Al_protease Alpha-lytic protease prodomain 7.8 0.24 1
DUF1535 Domain of Unknown Function (DUF1535) 6.7 0.26 1
LTXXQ LTXXQ motif 7.5 0.35 1
NUMOD1 NUMOD1 domain 8.2 0.36 1
DUF1715 Eukaryotic domain of unknown function 6.0 0.38 1
HTH_3 Helix-turn-helix 7.5 0.4 1
GRASP55_65 GRASP55/65 family 4.4 0.59 1
DUF2370 Protein of unknown function (DUF2370) 4.2 0.61 1
Rapamycin_bind Rapamycin binding domain 4.5 0.62 1
HTH_IclR IclR helix-turn-helix domain 6.0 0.63 1
Sigma70_r4_2 Sigma-70, region 4 7.3 0.67 1
DUF2312 Uncharacterized protein conserved in 6.0 0.71 1
CHAD CHAD domain 4.7 0.74 1
HEAT_PBS PBS lyase HEAT-like repeat 7.4 0.89 2
RDV-p3 Rice dwarf virus p3 -0.2 0.95 1
DUF1601 Protein of unknown function (DUF1601) 5.7 0.97 2
APC_basic APC basic domain 2.5 1.1 1
DBR1 Lariat debranching enzyme, C-terminal 3.1 1.2 1
STAT_alpha STAT protein, all-alpha domain 3.7 1.3 1
DUF1845 Domain of unknown function (DUF1845) 3.2 1.3 1
PCP Peridinin-chlorophyll A binding prote 2.5 1.3 1
Ribosomal_S39 Ribosomal subunit 39S 3.7 1.3 1
RVP Retroviral aspartyl protease 4.4 1.4 1
FBA_1 F-box associated 1.5 1.4 1
GSPII_E_N GSPII_E N-terminal domain 4.3 1.5 1
Peptidase_A21 Peptidase family A21 0.3 1.5 1
Alph_Pro_TM Putative transmembrane protein (Alph_ 1.9 1.7 1
HR_lesion HR-like lesion-inducing 2.3 1.8 1
YopE_N YopE, N terminal 2.1 1.9 1
Ribosomal_L35Ae Ribosomal protein L35Ae 3.5 2 1
Big_2 Bacterial Ig-like domain (group 2) 3.7 2.1 1
4F5 4F5 protein family 4.6 2.2 1
KorB KorB domain 4.0 2.3 1
Sorting_nexin Sorting nexin, N-terminal domain 1.3 2.3 1
Herpes_UL43 Herpesvirus UL43 protein 1.4 2.4 1
E_Pc_C Enhancer of Polycomb C-terminus 0.5 2.5 1
PriCT_2 Primase C terminal 2 (PriCT-2) 3.2 2.5 1
Zds1_C Sporulation protein Zds1 C terminal r 3.3 2.7 1
DUF1342 Protein of unknown function (DUF1342) 2.1 2.8 1
Ehbp Energy-converting hydrogenase B subun 3.1 2.8 1
Peptidase_C25_C Peptidase family C25, C terminal ig-l 2.7 2.9 1
DUF1711 Fungal protein of unknown function (D 1.5 3 1
DUF2401 Putative secretory protein (DUF2401) 2.2 3 1
WW WW domain 4.0 3.3 1
Ald_Xan_dh_C2 Aldehyde oxidase and xanthine dehydro 0.7 3.3 1
Tape_meas_lam_C Lambda phage tail tape-measure protei 3.1 3.4 1
Pou Pou domain - N-terminal to homeobox d 3.0 3.4 1
GD_AH_C D-galactarate dehydratase / Altronate 0.8 3.6 1
Micro_A_star Microvirus A* protein 1.4 3.6 1
CDT1 DNA replication factor CDT1 like 2.6 3.7 1
DNA_processg_A DNA recombination-mediator protein A 2.3 3.8 1
REV REV protein (anti-repression trans-ac 1.4 4.6 1
RmlD_sub_bind RmlD substrate binding domain 0.8 4.6 1
Glyco_hydro_9 Glycosyl hydrolase family 9 -0.0 4.7 1
UnbV_ASPIC ASPIC and UnbV 2.4 4.8 1
JTB Jumping translocation breakpoint prot 1.7 4.9 1
DUF930 Domain of Unknown Function (DUF930) 2.0 5 1
KH_1 KH domain 2.4 5 1
Glyco_hydro_81 Glycosyl hydrolase family 81 -0.3 5.1 1
nsp9 nsp9 replicase -0.3 5.2 1
PFK Phosphofructokinase -0.5 5.2 1
Bromo_coat Bromovirus coat protein 0.9 5.2 1
DUF637 Possible hemagglutinin (DUF637) 2.4 5.2 1
DUF1631 Protein of unknown function (DUF1631) -1.0 5.3 1
DUF1674 Protein of unknown function (DUF1674) 1.0 5.3 2
FliG_C FliG C-terminal domain 2.9 5.4 1
TetR_N Bacterial regulatory proteins, tetR f 3.2 5.6 1
TMP TMP repeat 4.5 5.9 2
rRNA_processing rRNA processing 1.8 6.1 1
DUF1490 Protein of unknown function (DUF1490) 1.7 6.1 1
DUF150 Uncharacterised BCR, YhbC family COG0 0.8 6.3 1
DUF622 Protein of unknown function, DUF622 2.4 6.5 1
TAP35_44 Tapetum specific protein TAP35/TAP44 0.6 6.7 1
PLRV_ORF5 Potato leaf roll virus readthrough pr -0.5 6.8 1
RAMPs RAMP superfamily 0.4 6.8 1
ROK ROK family 0.7 6.9 1
LysE LysE type translocator 0.8 6.9 1
EB1_binding EB-1 Binding Domain -0.5 7 1
EutC Ethanolamine ammonia-lyase light chai 0.7 7.1 1
PASTA PASTA domain 2.1 7.1 1
CamS CamS sex pheromone cAM373 precursor 0.3 7.1 1
eIF_4EBP Eukaryotic translation initiation fac -0.7 7.2 1
zf-TRAF TRAF-type zinc finger 2.9 7.2 1
NAD_binding_2 NAD binding domain of 6-phosphoglucon 0.6 7.3 1
AcetylCoA_hydro Acetyl-CoA hydrolase/transferase N-te 1.0 7.4 1
Rhomboid Rhomboid family 1.0 7.4 1
DUF1289 Protein of unknown function (DUF1289) 2.3 7.5 1
RIIa Regulatory subunit of type II PKA R-s 3.2 7.6 1
PspB Phage shock protein B 0.5 7.7 1
Drf_DAD DRF Autoregulatory Domain 4.0 7.7 1
RPEL RPEL repeat 2.9 8 1
Chorion_3 Chorion family 3 -1.0 8.2 1
GTP_cyclohydroI GTP cyclohydrolase I 0.9 8.3 1
Peptidase_U40 Peptidase U40 -0.6 8.3 1
DUF1694 Protein of unknown function (DUF1694) 0.9 8.4 1
Fic Fic/DOC family 2.7 8.5 1
PEGA PEGA domain 1.9 8.7 1
DUF2372 Uncharacterised conserved protein (DU 1.3 8.7 1
PetG Cytochrome B6-F complex subunit 5 2.1 8.9 1
2H-phosphodiest Domain of unknown function (DUF1868) 1.1 8.9 1
PDEase_I 3'5'-cyclic nucleotide phosphodiester -0.9 8.9 1
Orthoreo_P10 Orthoreovirus membrane fusion protein 0.8 9 1
Mtp Golgi 4-transmembrane spanning transp -0.4 9.3 1
SpvB Salmonella virulence plasmid 65kDa B -2.2 9.4 1
Chalcone Chalcone-flavanone isomerase -0.4 9.5 1
DUF1063 Protein of unknown function (DUF1063) -0.9 9.6 1
TPD52 Tumour protein D52 family 0.4 9.6 1
CAP160 CAP160 repeat 2.8 9.6 1
Peptidase_M8 Leishmanolysin -1.9 9.6 1
Chal_sti_synt_N Chalcone and stilbene synthases, N-te -0.8 9.7 1
Docking Erythronolide synthase docking 2.8 9.7 2
CNP1 CNP1-like family 0.7 9.8 1
NinE NINE Protein 1.7 9.8 1
UPF0146 Uncharacterised protein family (UPF01 1.1 9.9 1
Ribophorin_I Ribophorin I -0.4 9.9 1
U79_P34 HSV U79 / HCMV P34 -0.3 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Alph_Pro_TM 1/1 125 142 .. 220 237 .] 1.9 1.7
PFK 1/1 130 143 .. 299 312 .] -0.5 5.2
HEAT_PBS 1/2 133 158 .. 1 27 [] 2.5 19
TMP 1/2 169 179 .. 1 11 [] 2.8 19
HR_lesion 1/1 201 215 .. 190 204 .] 2.3 1.8
NAD_binding_2 1/1 204 219 .. 116 131 .. 0.6 7.3
rRNA_processing 1/1 230 238 .. 162 171 .] 1.8 6.1
DUF2372 1/1 239 253 .. 89 103 .] 1.3 8.7
DBR1 1/1 301 314 .. 1 14 [. 3.1 1.2
DUF2370 1/1 319 338 .. 35 58 .. 4.2 0.61
Mtp 1/1 332 356 .. 211 235 .] -0.4 9.3
Chorion_3 1/1 401 453 .. 264 321 .] -1.0 8.2
E_Pc_C 1/1 559 565 .. 279 285 .] 0.5 2.5
DUF1711 1/1 636 648 .. 280 292 .] 1.5 3
CAP160 1/1 641 665 .. 1 27 [] 2.8 9.6
STAT_alpha 1/1 664 677 .. 195 208 .] 3.7 1.3
YopE_N 1/1 740 751 .. 81 92 .. 2.1 1.9
APC_basic 1/1 756 792 .. 1 42 [. 2.5 1.1
JTB 1/1 817 834 .. 1 18 [. 1.7 4.9
GRASP55_65 1/1 824 852 .. 350 382 .] 4.4 0.59
EB1_binding 1/1 834 854 .. 1 22 [. -0.5 7
DUF930 1/1 883 897 .. 87 102 .] 2.0 5
Rhomboid 1/1 884 893 .. 1 11 [. 1.0 7.4
RPEL 1/1 992 1002 .. 1 11 [. 2.9 8
GTP_cyclohydroI 1/1 1014 1030 .. 89 105 .] 0.9 8.3
Fic 1/1 1089 1095 .. 16 22 .. 2.7 8.5
Ald_Xan_dh_C2 1/1 1165 1173 .. 599 607 .] 0.7 3.3
UPF0146 1/1 1221 1232 .. 103 114 .. 1.1 9.9
DUF2401 1/1 1239 1246 .. 1 8 [. 2.2 3
SpvB 1/1 1294 1301 .. 1 9 [. -2.2 9.4
DUF637 1/1 1316 1325 .. 173 182 .] 2.4 5.2
LysE 1/1 1318 1333 .. 186 201 .] 0.8 6.9
DUF1601 1/2 1359 1380 .. 1 22 [. 3.7 3.7
TMP 2/2 1376 1386 .. 1 11 [] 1.8 39
TAP35_44 1/1 1473 1500 .. 92 119 .] 0.6 6.7
RmlD_sub_bind 1/1 1503 1523 .. 198 222 .. 0.8 4.6
REV 1/1 1540 1574 .. 87 126 .] 1.4 4.6
ROK 1/1 1546 1555 .. 197 206 .] 0.7 6.9
Trypan_PARP 1/3 1652 1713 .. 58 121 .. 5.2 0.64
Trypan_PARP 2/3 1714 1779 .. 58 123 .. 11.7 0.012
Trypan_PARP 3/3 1812 1877 .. 58 123 .. 5.9 0.43
PLRV_ORF5 1/1 1856 1868 .. 1 13 [. -0.5 6.8
FBA_1 1/1 2020 2045 .. 186 212 .] 1.5 1.4
Bromo_coat 1/1 2033 2046 .. 177 190 .] 0.9 5.2
AcetylCoA_hydro 1/1 2034 2044 .. 218 228 .] 1.0 7.4
KH_1 1/1 2081 2100 .. 1 20 [. 2.4 5
DUF1631 1/1 2134 2148 .. 1 16 [. -1.0 5.3
PDEase_I 1/1 2171 2184 .. 78 91 .. -0.9 8.9
Herpes_UL43 1/1 2355 2374 .. 76 95 .. 1.4 2.4
PspB 1/1 2383 2393 .. 65 75 .] 0.5 7.7
DUF1845 1/1 2395 2409 .. 246 260 .] 3.2 1.3
Chalcone 1/1 2424 2437 .. 226 239 .] -0.4 9.5
DUF1063 1/1 2457 2468 .. 1 13 [. -0.9 9.6
CHAD 1/1 2468 2509 .. 233 275 .] 4.7 0.74
RVP 1/1 2490 2511 .. 1 26 [. 4.4 1.4
4F5 1/1 2545 2565 .. 74 94 .] 4.6 2.2
Glyco_hydro_81 1/1 2650 2664 .. 1 17 [. -0.3 5.1
NinE 1/1 2741 2763 .. 41 64 .] 1.7 9.8
PEGA 1/1 2809 2824 .. 58 73 .] 1.9 8.7
Peptidase_A21 1/1 2814 2831 .. 1 25 [. 0.3 1.5
PetG 1/1 2878 2901 .. 16 37 .] 2.1 8.9
Peptidase_C25_C 1/1 3023 3034 .. 1 12 [. 2.7 2.9
Ribophorin_I 1/1 3041 3057 .. 1 17 [. -0.4 9.9
Tape_meas_lam_C 1/1 3059 3070 .. 67 78 .] 3.1 3.4
HEAT_PBS 2/2 3060 3081 .. 1 22 [. 4.8 4.4
Glyco_hydro_9 1/1 3077 3114 .. 303 343 .. -0.0 4.7
PASTA 1/1 3259 3277 .. 55 73 .] 2.1 7.1
2H-phosphodiest 1/1 3262 3275 .. 114 128 .] 1.1 8.9
DUF1535 1/1 3318 3328 .. 39 49 .] 6.7 0.26
GD_AH_C 1/1 3340 3350 .. 397 407 .] 0.8 3.6
DUF1490 1/1 3707 3720 .. 81 94 .] 1.7 6.1
Peptidase_M8 1/1 3711 3737 .. 650 676 .] -1.9 9.6
Chal_sti_synt_N 1/1 3765 3771 .. 221 227 .] -0.8 9.7
EutC 1/1 3780 3801 .. 51 75 .. 0.7 7.1
DUF1342 1/1 3784 3801 .. 118 135 .. 2.1 2.8
Pou 1/1 3786 3796 .. 68 78 .] 3.0 3.4
DUF349 1/1 3813 3836 .. 43 66 .. 12.5 0.0099
Docking 1/2 3821 3832 .. 16 27 .] 1.9 18
DUF2312 1/1 3825 3836 .. 1 12 [. 6.0 0.71
TPD52 1/1 3911 3920 .. 185 194 .] 0.4 9.6
GSPII_E_N 1/1 3941 3969 .. 2 32 .. 4.3 1.5
CDT1 1/1 3960 3968 .. 207 215 .] 2.6 3.7
RIIa 1/1 3983 3992 .. 17 26 .. 3.2 7.6
Ribosomal_L35Ae 1/1 4018 4028 .. 91 101 .] 3.5 2
UnbV_ASPIC 1/1 4019 4035 .. 1 18 [. 2.4 4.8
Sorting_nexin 1/1 4107 4150 .. 97 139 .. 1.3 2.3
DUF1674 1/2 4240 4275 .. 1 38 [. 0.6 7.4
Orthoreo_P10 1/1 4278 4294 .. 84 100 .] 0.8 9
RDV-p3 1/1 4291 4303 .. 953 967 .] -0.2 0.95
PriCT_2 1/1 4308 4322 .. 1 19 [. 3.2 2.5
DUF150 1/1 4348 4376 .. 1 29 [. 0.8 6.3
Big_2 1/1 4378 4396 .. 71 90 .] 3.7 2.1
DUF622 1/1 4443 4453 .. 1 11 [. 2.4 6.5
Ribosomal_S39 1/1 4467 4489 .. 1 24 [. 3.7 1.3
PCP 1/1 4481 4493 .. 1 14 [. 2.5 1.3
Zds1_C 1/1 4517 4540 .. 17 38 .. 3.3 2.7
Docking 2/2 4530 4539 .. 18 27 .] 0.9 37
Rapamycin_bind 1/1 4530 4540 .. 90 100 .] 4.5 0.62
CNP1 1/1 4606 4621 .. 148 165 .] 0.7 9.8
Ehbp 1/1 4611 4629 .. 70 88 .] 3.1 2.8
DNA_processg_A 1/1 4654 4678 .. 63 87 .. 2.3 3.8
nsp9 1/1 4673 4680 .. 105 112 .] -0.3 5.2
Drf_DAD 1/1 4769 4783 .. 1 15 [] 4.0 7.7
eIF_4EBP 1/1 4787 4796 .. 1 10 [. -0.7 7.2
U79_P34 1/1 4857 4895 .. 226 285 .] -0.3 9.9
Micro_A_star 1/1 4861 4875 .. 1 15 [. 1.4 3.6
DUF1674 2/2 4866 4884 .. 1 19 [. 0.4 8.9
FliG_C 1/1 4867 4898 .. 32 63 .. 2.9 5.4
DUF1289 1/1 4883 4911 .. 28 56 .] 2.3 7.5
LTXXQ 1/1 4890 4900 .. 13 23 .] 7.5 0.35
Sigma70_r4_2 1/1 4890 4923 .. 12 45 .. 7.3 0.67
TetR_N 1/1 4894 4930 .. 6 42 .. 3.2 5.6
HTH_IclR 1/1 4896 4926 .. 11 43 .. 6.0 0.63
CamS 1/1 4897 4917 .. 1 22 [. 0.3 7.1
HTH_3 1/1 4901 4928 .. 8 37 .. 7.5 0.4
Pro_Al_protease 1/1 4901 4922 .. 45 68 .] 7.8 0.24
KorB 1/1 4902 4913 .. 1 12 [. 4.0 2.3
RAMPs 1/1 4959 4967 .. 279 287 .] 0.4 6.8
DUF1715 1/1 4994 5014 .. 100 120 .] 6.0 0.38
DUF1601 2/2 4998 5034 .. 1 37 [] 2.0 12
Peptidase_U40 1/1 5017 5031 .. 198 212 .] -0.6 8.3
NUMOD1 1/1 5026 5045 .. 19 38 .] 8.2 0.36
DUF1694 1/1 5036 5047 .. 1 14 [. 0.9 8.4
zf-TRAF 1/1 5036 5044 .. 53 61 .] 2.9 7.2
WW 1/1 5143 5160 .. 7 24 .. 4.0 3.3
Alignments of top-scoring domains:
Alph_Pro_TM: domain 1 of 1, from 125 to 142: score 1.9, E = 1.7
*->vllAvaaGWlAsavFRkd<-*
+++A+a G++A+av +
gi|1590403 125 IAFAIASGFGAAAVPALI 142
PFK: domain 1 of 1, from 130 to 143: score -0.5, E = 5.2
CS HHHHHHHHHHHHHT
*->ASrmGaeAVeaLLe<-*
AS Ga+AV aL+
gi|1590403 130 ASGFGAAAVPALIK 143
HEAT_PBS: domain 1 of 2, from 133 to 158: score 2.5, E = 19
CS HHHHHHHHHCCCSSHCCHHHHHHHHCT
*->vRraAaraLgalgdpeAipaLleaLed<-*
+aA+ aL ++g e + L+e+L+
gi|1590403 133 FGAAAVPALIKIGQ-EIVKTLIEFLRM 158
TMP: domain 1 of 2, from 169 to 179: score 2.8, E = 19
*->WngIkgffsga<-*
W+gI ++++ +
gi|1590403 169 WEGIEEGLEEL 179
HR_lesion: domain 1 of 1, from 201 to 215: score 2.3, E = 1.8
*->qgLAlaGALLfFIgm<-*
q LAla A fFIgm
gi|1590403 201 QDLALAFAGGFFIGM 215
NAD_binding_2: domain 1 of 1, from 204 to 219: score 0.6, E = 7.3
CS HHHTTTEEEEEEEECC
*->elaekGirflDAPVSG<-*
+la +G f++++VSG
gi|1590403 204 ALAFAGGFFIGMGVSG 219
rRNA_processing: domain 1 of 1, from 230 to 238: score 1.8, E = 6.1
*->KIKkDeTYTs<-*
KI+k+ TYT+
gi|1590403 230 KINKN-TYTR 238
DUF2372: domain 1 of 1, from 239 to 253: score 1.3, E = 8.7
*->etLKaiakviiEnrl<-*
etL a+a++++E ++
gi|1590403 239 ETLSALAETLFEGLF 253
DBR1: domain 1 of 1, from 301 to 314: score 3.1, E = 1.2
*->vPskSsSsGRPqvT<-*
P k+sS G P++T
gi|1590403 301 DPKKGSSRGNPPPT 314
DUF2370: domain 1 of 1, from 319 to 338: score 4.2, E = 0.61
*->AKPdreenaeneeedkPPsYeeAA<-*
++P+ ++ d+PPsY++AA
gi|1590403 319 PPPPAYH----DIGDSPPSYDQAA 338
Mtp: domain 1 of 1, from 332 to 356: score -0.4, E = 9.3
*->PsYEeAlSLPsKiPEgePaPPpyse<-*
PsY A P+ E PPpy e
gi|1590403 332 PSYDQAAGSPPPHSETQGDPPPYNE 356
Chorion_3: domain 1 of 1, from 401 to 453: score -1.0, E = 8.2
*->PAPAPsYsAAPAQSYnaagAPSYSaAgaasysadsyAaydeaPlAsY
PA AP+++ P S +a+AP S A+a ++ ++ a++ P +
gi|1590403 401 PATAPAFANRPDLSTVNAPAPNGSVAPA--PGTAPASAGALRPG--F 443
aaeasYGSPsy<-*
a + +G Ps+
gi|1590403 444 AGVSHFG-PSS 453
E_Pc_C: domain 1 of 1, from 559 to 565: score 0.5, E = 2.5
*->TVAMEVT<-*
TVAM VT
gi|1590403 559 TVAMPVT 565
DUF1711: domain 1 of 1, from 636 to 648: score 1.5, E = 3
*->APvsAseesatkv<-*
AP++A++e a +v
gi|1590403 636 APAPAMVEQASAV 648
CAP160: domain 1 of 1, from 641 to 665: score 2.8, E = 9.6
*->lssatavvadkavaAknvvaskLGygg<-*
+ +++++v d av+ +vas+ G++g
gi|1590403 641 MVEQASAVPDPAVE--PAVASESGFTG 665
STAT_alpha: domain 1 of 1, from 664 to 677: score 3.7, E = 1.3
CS HHHHHHHHHHHHHH
*->eervtellrnLvks<-*
++++++++++Lv+s
gi|1590403 664 TGQALDAQQTLVTS 677
YopE_N: domain 1 of 1, from 740 to 751: score 2.1, E = 1.9
CS -----XXXXXXX
*->GsHKPvvtPAPt<-*
G H P vtPAPt
gi|1590403 740 GQHDPAVTPAPT 751
APC_basic: domain 1 of 1, from 756 to 792: score 2.5, E = 1.1
*->nmPsilRGRT..vIyipgvrnpasrtqpkgkkGPPlktPasksP<-*
P+ +RG T+ vI p+ s+t p GP t as P
gi|1590403 756 --PATSRGQTdiVIDLPS----GSSTDPGAENGP-RTTAASIGP 792
JTB: domain 1 of 1, from 817 to 834: score 1.7, E = 4.9
*->AeapvreEklvvstsnse<-*
A+a r E+ +stsn+e
gi|1590403 817 ADAVLRTEPAAASTSNLE 834
GRASP55_65: domain 1 of 1, from 824 to 852: score 4.4, E = 0.59
*->asaaessssasqttyspPsaPvsvqAtadesas<-*
++aa+s+s++++t++ +PsaPvs a es
gi|1590403 824 EPAAASTSNLEATAPTSPSAPVS----ANESDQ 852
EB1_binding: domain 1 of 1, from 834 to 854: score -0.5, E = 7
*->RsGRsPtGnsPPviDnvLDqGq<-*
+Pt s Pv n DqGq
gi|1590403 834 -EATAPTSPSAPVSANESDQGQ 854
DUF930: domain 1 of 1, from 883 to 897: score 2.0, E = 5
*->deIPrseWdkygLPvd<-*
d++Pr++W ++L +
gi|1590403 883 DVVPRDQWWRLYL-DP 897
Rhomboid: domain 1 of 1, from 884 to 893: score 1.0, E = 7.4
*->lvqrgqlWRsl<-*
+v+r q+WR l
gi|1590403 884 VVPRDQWWR-L 893
RPEL: domain 1 of 1, from 992 to 1002: score 2.9, E = 8
*->dlLarKLSqRP<-*
d+La ++++RP
gi|1590403 992 DVLAERIGERP 1002
GTP_cyclohydroI: domain 1 of 1, from 1014 to 1030: score 0.9, E = 8.3
*->RGgiktgsetvTsaagg<-*
RGg k++++t T + +g
gi|1590403 1014 RGGPKPVTFTSTIMGRG 1030
Fic: domain 1 of 1, from 1089 to 1095: score 2.7, E = 8.5
*->HPFvDGN<-*
HPF DGN
gi|1590403 1089 HPFEDGN 1095
Ald_Xan_dh_C2: domain 1 of 1, from 1165 to 1173: score 0.7, E = 3.3
CS T--GTTTSS
*->kIPtidDiP<-*
+IPt++D+P
gi|1590403 1165 QIPTVVDVP 1173
UPF0146: domain 1 of 1, from 1221 to 1232: score 1.1, E = 9.9
*->plyIkPLtGepv<-*
pl I+PLtG+++
gi|1590403 1221 PLVIRPLTGDRP 1232
DUF2401: domain 1 of 1, from 1239 to 1246: score 2.2, E = 3
*->sgdWnRva<-*
gdWnRv+
gi|1590403 1239 DGDWNRVS 1246
SpvB: domain 1 of 1, from 1294 to 1301: score -2.2, E = 9.4
*->aaAGPDGlA<-*
a GPDGlA
gi|1590403 1294 -ALGPDGLA 1301
DUF637: domain 1 of 1, from 1316 to 1325: score 2.4, E = 5.2
*->frtGAlAAGa<-*
++tGAlA+G
gi|1590403 1316 CETGALAGGF 1325
LysE: domain 1 of 1, from 1318 to 1333: score 0.8, E = 6.9
*->aGalligFGvyLlysg<-*
+Gal +gF+ +L++++
gi|1590403 1318 TGALAGGFAHQLAHAR 1333
DUF1601: domain 1 of 2, from 1359 to 1380: score 3.7, E = 3.7
*->mqvkwreleeQrLtdrLldaIr<-*
+ +w+ +Q+L+d +da++
gi|1590403 1359 DSESWQLYTPQSLDDEGWDAVN 1380
TMP: domain 2 of 2, from 1376 to 1386: score 1.8, E = 39
*->WngIkgffsga<-*
W+++ + ++g
gi|1590403 1376 WDAVNDVATGT 1386
TAP35_44: domain 1 of 1, from 1473 to 1500: score 0.6, E = 6.7
*->ptnPsGAqeEseKLPssPsKdnKDGgnA<-*
p Ps +E eKLPss A
gi|1590403 1473 PSAPSTVSREREKLPSSQPDSMASSEEA 1500
RmlD_sub_bind: domain 1 of 1, from 1503 to 1523: score 0.8, E = 4.6
CS EEHHHHHHHHHHHHHHT-.....-E
*->TsArdLAdallalarkrlagpalaG<-*
TsA+dLAd ++a+a++r aG
gi|1590403 1503 TSAGDLADQVAAAADGRDV----AG 1523
REV: domain 1 of 1, from 1540 to 1574: score 1.4, E = 4.6
*->qqlPDPgtsgtqntsqpetgvgePtsapesseilgsgake<-*
++lP+P + t + + + + +P++++es ga
gi|1590403 1540 DTLPSP--VETFASESGLLMQAGPQPVGES---ARAGATD 1574
ROK: domain 1 of 1, from 1546 to 1555: score 0.7, E = 6.9
CS HHHHHSHHHH
*->lEtiASGrAl<-*
+Et+AS+ +l
gi|1590403 1546 VETFASESGL 1555
Trypan_PARP: domain 1 of 3, from 1652 to 1713: score 5.2, E = 0.64
*->teredePEeeeEtePEeegeeEtePEeegeeEtePEetgeeepepep
+e+ + E + E++PE e+e+ +e + + E+ E + e e +
gi|1590403 1652 AEPKSGSESKAEAQPELEPEPRSEAKADAKTEAKAEL--KSESESKA 1696
EtEPEPEPepepepepe<-*
E+ PEPEP+ epep+ e
gi|1590403 1697 EAQPEPEPKSEPEPKAE 1713
Trypan_PARP: domain 2 of 3, from 1714 to 1779: score 11.7, E = 0.012
*->teredePEeeeEtePEeegeeEtePEeegeeEtePEetgeeepepep
+++e P e E+eP e + ++ E++ e E+ E e +pepep
gi|1590403 1714 AQPELKPKSESEPEPRSEAKADAKTEPKSESEPKIESKAEAQPEPEP 1760
EtEPEPEPepepepepepG<-*
E+ P P P+p+p+ e epG
gi|1590403 1761 EPKPKPKPKPKPKSESEPG 1779
Trypan_PARP: domain 3 of 3, from 1812 to 1877: score 5.9, E = 0.43
*->teredePEeeeEtePEeegeeEtePEeegeeEtePEetgeeepepep
+e e+ P e E++P e +e +e+e+E++ E + + e +
gi|1590403 1812 AESEPKPKSESEPGPKSGSESKAEAQPEPEPEPGSEAKADAKTEVKA 1858
EtEPEPEPepepepepepG<-*
E+EP P P p+ ep p+ G
gi|1590403 1859 ESEPKPGPGPKSEPGPKSG 1877
PLRV_ORF5: domain 1 of 1, from 1856 to 1868: score -0.5, E = 6.8
*->VDgePgPsPsPsP<-*
V e++P+P+P P
gi|1590403 1856 VKAESEPKPGPGP 1868
FBA_1: domain 1 of 1, from 2020 to 2045: score 1.5, E = 1.4
*->ggq.ervgddpnvycsPlvchcssYVPS<-*
g+ ++ v+ d+ + ++P ++ +s VPS
gi|1590403 2020 GSHsRSVKLDHYSHVDPKFF--VSFVPS 2045
Bromo_coat: domain 1 of 1, from 2033 to 2046: score 0.9, E = 5.2
CS EE-SCCCCS--STT
*->HVrPtFddrFtPvy<-*
HV P+F +F P +
gi|1590403 2033 HVDPKFFVSFVPSA 2046
AcetylCoA_hydro: domain 1 of 1, from 2034 to 2044: score 1.0, E = 7.4
*->vDpekvVavvp<-*
vDp++ V +vp
gi|1590403 2034 VDPKFFVSFVP 2044
KH_1: domain 1 of 1, from 2081 to 2100: score 2.4, E = 5
CS CEEEEEECCCHHHHHCSSSH
*->tiriliPsskvgriIGkgGs<-*
i++++P+ + ++ G++G+
gi|1590403 2081 QIEVTVPAVIHASLRGPNGQ 2100
DUF1631: domain 1 of 1, from 2134 to 2148: score -1.0, E = 5.3
*->tlslPIapsalsaRlp<-*
++++P +p++l+aR p
gi|1590403 2134 AVPEP-GPDPLPARVP 2148
PDEase_I: domain 1 of 1, from 2171 to 2184: score -0.9, E = 8.9
*->HlaqafkLLqdEec<-*
H++q+ k+Lq+E++
gi|1590403 2171 HFEQVAKILQEEGL 2184
Herpes_UL43: domain 1 of 1, from 2355 to 2374: score 1.4, E = 2.4
*->kiGRpaQliaaliaaivWtl<-*
+iGRpaQ+++ ++a + Wt+
gi|1590403 2355 LIGRPAQTLGGAVATVQWTT 2374
PspB: domain 1 of 1, from 2383 to 2393: score 0.5, E = 7.7
*->LDaEsPnWRrr<-*
LD+ +WR+r
gi|1590403 2383 LDSDPTEWRGR 2393
DUF1845: domain 1 of 1, from 2395 to 2409: score 3.2, E = 1.3
*->GtrRSsFaPrpikrr<-*
G rR FaP pi ++
gi|1590403 2395 GDRRTHFAPAPIEQG 2409
Chalcone: domain 1 of 1, from 2424 to 2437: score -0.4, E = 9.5
CS THHHHHHHHHHHHH
*->peaRkSvadgLmgL<-*
+++R+Sv+++L ++
gi|1590403 2424 DQLRRSVINALRDV 2437
DUF1063: domain 1 of 1, from 2457 to 2468: score -0.9, E = 9.6
*->kwqlylieiLkke<-*
++q++ i +Lkke
gi|1590403 2457 MRQRL-IPALKKE 2468
CHAD: domain 1 of 1, from 2468 to 2509: score 4.7, E = 0.74
*->ralLrrladaargageeaafalgllaareaarrrlaraalall<-*
+a++r+++d a++ ++ + + l +re+ + +l ++ l+ll
gi|1590403 2468 EAFVRQFGDPE-LAQGLTGTVQAILSRREDIEVQLSDRQLRLL 2509
RVP: domain 1 of 1, from 2490 to 2511: score 4.4, E = 1.4
CS ESSS--EEEEEECCESS.EEEEEEE-
*->slerrPritvkvgGqgspvpikaLLD<-*
+l+rr+ i+v+++ + +++ LLD
gi|1590403 2490 ILSRREDIEVQLSDR----QLRLLLD 2511
4F5: domain 1 of 1, from 2545 to 2565: score 4.6, E = 2.2
*->rdAelMreKQakAaakkaAeA<-*
+d+e++ +K A + +aA+A
gi|1590403 2545 SDGEILNQKESGATENRAAKA 2565
Glyco_hydro_81: domain 1 of 1, from 2650 to 2664: score -0.3, E = 5.1
*->pPsvfdrsvlPdPsrff<-*
+ f++sv P+Psr++
gi|1590403 2650 --TTFESSVRPNPSRLL 2664
NinE: domain 1 of 1, from 2741 to 2763: score 1.7, E = 9.8
*->vksflydaqLtdIfklrelaRktv<-*
v fl +a+L d+ k +l R+t
gi|1590403 2741 VEAFLGTAHLLDVVK-ETLTRATN 2763
PEGA: domain 1 of 1, from 2809 to 2824: score 1.9, E = 8.7
*->tagetvkvsltLtptp<-*
+a+ + +v+++L+p++
gi|1590403 2809 RADAYAEVKIRLRPRN 2824
Peptidase_A21: domain 1 of 1, from 2814 to 2831: score 0.3, E = 1.5
*->gDaNvasksPhmkrraRnvRlrgNt<-*
a v++ + r+Rn R++++t
gi|1590403 2814 --AEVKI-----RLRPRNPRVQAPT 2831
PetG: domain 1 of 1, from 2878 to 2901: score 2.1, E = 8.9
*->vtlaGLFva..AYlqYrRgnqlei<-*
vt +G+Fv ++ +lq+ Rg+++e
gi|1590403 2878 VTSSGVFVMsgTFLQFARGQKYEH 2901
Peptidase_C25_C: domain 1 of 1, from 3023 to 3034: score 2.7, E = 2.9
CS -B---EE--SEE
*->PtkmqvTaPAsi<-*
Pt + T+PA i
gi|1590403 3023 PTNRTITLPAMI 3034
Ribophorin_I: domain 1 of 1, from 3041 to 3057: score -0.4, E = 9.9
*->dlknsnvkRtIDLsShi<-*
+ + ++Rt DLsShi
gi|1590403 3041 SFGIGGLDRTLDLSSHI 3057
Tape_meas_lam_C: domain 1 of 1, from 3059 to 3070: score 3.1, E = 3.4
*->aarqAiagaiss<-*
a+r Ai++ai++
gi|1590403 3059 AVRRAITNAIGG 3070
HEAT_PBS: domain 2 of 2, from 3060 to 3081: score 4.8, E = 4.4
CS HHHHHHHHHCCCSSHCCHHHHH
*->vRraAaraLgalgdpeAipaLl<-*
vRra+ a+g +++++aLl
gi|1590403 3060 VRRAITNAIGGTHGTRVAQALL 3081
Glyco_hydro_9: domain 1 of 1, from 3077 to 3114: score -0.0, E = 4.7
CS HHHHHHHC-H--S-HHHHHHHHHHHHHHHHHHHHHHCCS.C
*->aqlLLAklptlelkgkdaekakqkyksaaerflcswlpgsg<-*
aq LL l+ ++++ + ++q+++++a++++ s l+g g
gi|1590403 3077 AQALLPES-SLDAPHDN-VRMLQTFLGHADSHIASALNG-G 3114
PASTA: domain 1 of 1, from 3259 to 3277: score 2.1, E = 7.1
*->PpaGtkvpkgskvtLtvsk<-*
P+aG+ +++ +tL+vs+
gi|1590403 3259 PKAGAVLREVRPLTLRVSP 3277
2H-phosphodiest: domain 1 of 1, from 3262 to 3275: score 1.1, E = 8.9
*->tasatgvrPnegilL<-*
+a+ ++vrP +++++
gi|1590403 3262 GAVLREVRP-LTLRV 3275
DUF1535: domain 1 of 1, from 3318 to 3328: score 6.7, E = 0.26
*->qEeAQYAIdnL<-*
+E +QYA++++
gi|1590403 3318 PEPSQYAVEHV 3328
GD_AH_C: domain 1 of 1, from 3340 to 3350: score 0.8, E = 3.6
*->ElaifKlgvtl<-*
Ela++++gvt
gi|1590403 3340 ELALTNSGVTV 3350
DUF1490: domain 1 of 1, from 3707 to 3720: score 1.7, E = 6.1
*->GeEvppPAvadtdd<-*
G+ +p+PAv+d+ +
gi|1590403 3707 GASAPAPAVSDVAE 3720
Peptidase_M8: domain 1 of 1, from 3711 to 3737: score -1.9, E = 9.6
*->PvkgivDyegdvvSpssadssagleaa<-*
P+ ++ D++ d+vS+++++ ++g e a
gi|1590403 3711 PAPAVSDVAEDTVSAAADGGPDGAETA 3737
Chal_sti_synt_N: domain 1 of 1, from 3765 to 3771: score -0.8, E = 9.7
CS EEEESS-
*->vIvGsDP<-*
+++GsDP
gi|1590403 3765 AVIGSDP 3771
EutC: domain 1 of 1, from 3780 to 3801: score 0.7, E = 7.1
*->HtpLDvaaLaaqLaanlGlpllrVq<-*
+++LD++aL a+La+ +l+r q
gi|1590403 3780 WADLDTPALRAWLAD---PELVRTQ 3801
DUF1342: domain 1 of 1, from 3784 to 3801: score 2.1, E = 2.8
*->DLPayHyWLhlpaeqRqq<-*
D Pa+ +WL+ p+ +R q
gi|1590403 3784 DTPALRAWLADPELVRTQ 3801
Pou: domain 1 of 1, from 3786 to 3796: score 3.0, E = 3.4
*->PlLekWLeeAE<-*
P L +WL+++E
gi|1590403 3786 PALRAWLADPE 3796
DUF349: domain 1 of 1, from 3813 to 3836: score 12.5, E = 0.0099
*->AEaLapestdWkaAgarlReLlde<-*
A +L+p+st+++ A++rlR L ++
gi|1590403 3813 ARELVPQSTELGQAAERLRQLVER 3836
Docking: domain 1 of 2, from 3821 to 3832: score 1.9, E = 18
*->aDLhqtRqRLre<-*
++L q+ +RLr
gi|1590403 3821 TELGQAAERLRQ 3832
DUF2312: domain 1 of 1, from 3825 to 3836: score 6.0, E = 0.71
*->vAadqLRqfIER<-*
Aa++LRq +ER
gi|1590403 3825 QAAERLRQLVER 3836
TPD52: domain 1 of 1, from 3911 to 3920: score 0.4, E = 9.6
*->lssaagaSAt<-*
+++a++aSA
gi|1590403 3911 ANGADHASAR 3920
GSPII_E_N: domain 1 of 1, from 3941 to 3969: score 4.3, E = 1.5
CS HHTT-S-HHHHHHHHHHH..HT--B--GGS-
*->velGliseeqlaeaLaeqrKlglPlvdLsef<-*
++ G +s++q+ ++L+++ + +Pl dL+e+
gi|1590403 3941 LADGSLSAQQMFDFLSTH--HDIPLHDLPEQ 3969
CDT1: domain 1 of 1, from 3960 to 3968: score 2.6, E = 3.7
*->diPkaeLPe<-*
diP+++LPe
gi|1590403 3960 DIPLHDLPE 3968
RIIa: domain 1 of 1, from 3983 to 3992: score 3.2, E = 7.6
*->aqPsDlvqFa<-*
a+P+D+v+Fa
gi|1590403 3983 ARPADPVEFA 3992
Ribosomal_L35Ae: domain 1 of 1, from 4018 to 4028: score 3.5, E = 2
*->akAlGdrvRil<-*
a+AlG r+Ri
gi|1590403 4018 ASALGSRIRIH 4028
UnbV_ASPIC: domain 1 of 1, from 4019 to 4035: score 2.4, E = 4.8
*->dAiGAtVtvttPgdrvlt<-*
A G++++++t d+v+t
gi|1590403 4019 SALGSRIRIHT-PDHVQT 4035
Sorting_nexin: domain 1 of 1, from 4107 to 4150: score 1.3, E = 2.3
*->StereLilkseP..skalTsvsPttLiAPRiEaksiskPviFdrS<-
St +L ++ P++s +T vsP+ +Ea+ s+P i +S
gi|1590403 4107 STAPDLTSSTDPdrSESVTAVSPQ-PAGDGVEATDDSRPSIIGPS 4150
*
gi|1590403 - -
DUF1674: domain 1 of 2, from 4240 to 4275: score 0.6, E = 7.4
*->spaalralaeaearrikeaepleklpddvNpeTkEiGG<-*
+ + +al+ a++ r +ep+ k+p + peT+ +GG
gi|1590403 4240 PADEAEALDAASRGRPSPKEPAGKRP--TDPETPDVGG 4275
Orthoreo_P10: domain 1 of 1, from 4278 to 4294: score 0.8, E = 9
*->aLtsgkvnatppgydYV<-*
a t + ++ tpp++ YV
gi|1590403 4278 ATTVSGIHTTPPPVTYV 4294
RDV-p3: domain 1 of 1, from 4291 to 4303: score -0.2, E = 0.95
*->vtYvqiGvHeVllDP<-*
vtYv+ G VllDP
gi|1590403 4291 VTYVPAGL--VLLDP 4303
PriCT_2: domain 1 of 1, from 4308 to 4322: score 3.2, E = 2.5
*->darsaLdyipnpdyadgDY<-*
++r aL+y p p++ +Y
gi|1590403 4308 KLRVALNYPP-PSD---EY 4322
DUF150: domain 1 of 1, from 4348 to 4376: score 0.8, E = 6.3
CS HHHHHH-S.SSEEEEEEEEEETTEEEEEE
*->liepvveslGlELvdvefvkegrgwvLri<-*
li + ++s+G ++v v++ + r++ Lr+
gi|1590403 4348 LITADTRSHGKDVVLVACETGQRDYDLRL 4376
Big_2: domain 1 of 1, from 4378 to 4396: score 3.7, E = 2.1
CS S-EEEEEEETT.TEEEEEEE
*->GtatItatsgdgnksasvtv<-*
G+a Ita+s + ++a+vt
gi|1590403 4378 GQAAITAVSAS-PDTAWVTA 4396
DUF622: domain 1 of 1, from 4443 to 4453: score 2.4, E = 6.5
*->aRkTSSqnpni<-*
+R+TS ++pni
gi|1590403 4443 TRHTSAEPPNI 4453
Ribosomal_S39: domain 1 of 1, from 4467 to 4489: score 3.7, E = 1.3
*->fasaervkslKkvevsirareskk<-*
a+++ +k+ Kk ++ +++r++kk
gi|1590403 4467 -ATSSDKKRPKKSLIDDIDRAAKK 4489
PCP: domain 1 of 1, from 4481 to 4493: score 2.5, E = 1.3
CS -H.HHHHHHHHHHH
*->DgPIGdAAKKlsDA<-*
D I +AAKK+ A
gi|1590403 4481 DD-IDRAAKKFTRA 4493
Zds1_C: domain 1 of 1, from 4517 to 4540: score 3.3, E = 2.7
*->ERAIYRLsHl..KLsnpkReLrqQ<-*
ERA LsHl+ KL + R+Lr+Q
gi|1590403 4517 ERAAQTLSHLsfKLHDVFRQLREQ 4540
Docking: domain 2 of 2, from 4530 to 4539: score 0.9, E = 37
*->LhqtRqRLre<-*
Lh++ ++Lre
gi|1590403 4530 LHDVFRQLRE 4539
Rapamycin_bind: domain 1 of 1, from 4530 to 4540: score 4.5, E = 0.62
CS HHHHHHHHT--
*->YyqVFrrIdkQ<-*
++ VFr++++Q
gi|1590403 4530 LHDVFRQLREQ 4540
CNP1: domain 1 of 1, from 4606 to 4621: score 0.7, E = 9.8
*->gvvarDGRaaeaVrrLka<-*
++++ D a+e V rL++
gi|1590403 4606 HLAPQD--ADEYVGRLRR 4621
Ehbp: domain 1 of 1, from 4611 to 4629: score 3.1, E = 2.8
*->ddDdFlglykmvkekvkka<-*
d D+++g ++ +ek+++a
gi|1590403 4611 DADEYVGRLRRSEEKIDEA 4629
DNA_processg_A: domain 1 of 1, from 4654 to 4678: score 2.3, E = 3.8
*->apTaYGeqvareLakeLakrGvtIV<-*
apT+++ + ++L+++++k G++IV
gi|1590403 4654 APTDESRLWLNHLLTSDEKMGAVIV 4678
nsp9: domain 1 of 1, from 4673 to 4680: score -0.3, E = 5.2
CS HHHHSBB-
*->igaTVRLQ<-*
+ga+++LQ
gi|1590403 4673 MGAVIVLQ 4680
Drf_DAD: domain 1 of 1, from 4769 to 4783: score 4.0, E = 7.7
*->GvmDsLLEALqsGaA<-*
G +D+ LE + sG A
gi|1590403 4769 GRVDNYLEGVISGVA 4783
eIF_4EBP: domain 1 of 1, from 4787 to 4796: score -0.7, E = 7.2
*->MSaspiarQa<-*
MS s+ +rQa
gi|1590403 4787 MSVSALSRQA 4796
U79_P34: domain 1 of 1, from 4857 to 4895: score -0.3, E = 9.9
*->gsGsGgqsslksvnfyfscvkersrlLedeCspreppkeKRQKthHd
g G ++++++ ++ r L++ e RQ+
gi|1590403 4857 GTGKEKSHGSRAAQ----------RVLNE--------AERRQL---A 4882
dRPeRrlEpqsee<-*
+ r ++q+
gi|1590403 4883 AAWKGRDPEQRAA 4895
Micro_A_star: domain 1 of 1, from 4861 to 4875: score 1.4, E = 3.6
*->mKsRrgfmvQrlmNa<-*
+Ks ++ Qr++N+
gi|1590403 4861 EKSHGSRAAQRVLNE 4875
DUF1674: domain 2 of 2, from 4866 to 4884: score 0.4, E = 8.9
*->spaalralaeaearrikea<-*
s aa+r l eae+r++++a
gi|1590403 4866 SRAAQRVLNEAERRQLAAA 4884
FliG_C: domain 1 of 1, from 4867 to 4898: score 2.9, E = 5.4
*->raiqrlLreVdsdvLalALKGAseelrekils<-*
ra qr+L e + +La A KG ++e r ++++
gi|1590403 4867 RAAQRVLNEAERRQLAAAWKGRDPEQRAALFK 4898
DUF1289: domain 1 of 1, from 4883 to 4911: score 2.3, E = 7.5
*->aaWssmsddERravlqllpqRlaalglkp<-*
aaW++ ++++R+a ++ ++R +++ +
gi|1590403 4883 AAWKGRDPEQRAALFKHHAARGVSQAEIA 4911
LTXXQ: domain 1 of 1, from 4890 to 4900: score 7.5, E = 0.35
*->pEQrqqlkrlk<-*
pEQr++l++++
gi|1590403 4890 PEQRAALFKHH 4900
Sigma70_r4_2: domain 1 of 1, from 4890 to 4923: score 7.3, E = 0.67
*->PprqRevflLryleglsyaEIAelLGisegtVks<-*
P+++ + f + g s+aEIAe G +++V +
gi|1590403 4890 PEQRAALFKHHAARGVSQAEIAEASGADPSSVYK 4923
TetR_N: domain 1 of 1, from 4894 to 4930: score 3.2, E = 5.6
CS HHHHHHHTTTT--HHHHHHHHTSSHHHHHHHCSSHHH
*->leLFaekGydattvreIAkrAGvskgalYrhFkSKee<-*
++LF ++ ++++ +eIA++ G ++++Y ++K++
gi|1590403 4894 AALFKHHAARGVSQAEIAEASGADPSSVYKIVRDKDG 4930
HTH_IclR: domain 1 of 1, from 4896 to 4926: score 6.0, E = 0.63
CS XXXXXXXX..X. XXXXXXXXXXXXXXXXXXXXX
*->alaeaprgsilG.tlteiAartGLpkSTahRlLq<-*
++ +++ + G + +eiA+++G ++S+++ +++
gi|1590403 4896 LFKHHAAR---GvSQAEIAEASGADPSSVYKIVR 4926
CamS: domain 1 of 1, from 4897 to 4917: score 0.3, E = 7.1
*->PykeskaRGlvvaniKTnnRlD<-*
+k+ +aRG+ +a i ++++D
gi|1590403 4897 -FKHHAARGVSQAEIAEASGAD 4917
HTH_3: domain 1 of 1, from 4901 to 4928: score 7.5, E = 0.4
CS HHTT-HHHHHHHHTT.TSHHHHHHHHHTTS
*->kelglsqeeLAeklGskvsrstiskiEnGk<-*
+++g sq+e+Ae++G ++s++ ki ++k
gi|1590403 4901 AARGVSQAEIAEASG--ADPSSVYKIVRDK 4928
Pro_Al_protease: domain 1 of 1, from 4901 to 4922: score 7.8, E = 0.24
CS EECT.HCCCHCCHCCCTEECCCEC
*->AdsGgtvaaaafaklagvaaglvr<-*
A++ v++a++a+++g++++ v
gi|1590403 4901 AAR--GVSQAEIAEASGADPSSVY 4922
KorB: domain 1 of 1, from 4902 to 4913: score 4.0, E = 2.3
*->akGvkkaeIAkk<-*
a Gv++aeIA++
gi|1590403 4902 ARGVSQAEIAEA 4913
RAMPs: domain 1 of 1, from 4959 to 4967: score 0.4, E = 6.8
*->tsrGyGlvk<-*
tsrG G++k
gi|1590403 4959 TSRGAGKFK 4967
DUF1715: domain 1 of 1, from 4994 to 5014: score 6.0, E = 0.38
*->eqfekdleKirnKfRvilssL<-*
+q ek+++K + K+R i+s L
gi|1590403 4994 KQIEKSQSKSTLKARDIPSAL 5014
DUF1601: domain 2 of 2, from 4998 to 5034: score 2.0, E = 12
*->mqvkwreleeQrLtdrLldaIrrNaeRFnpqeIaNtL<-*
+ + l +++ + L a + ++++ q+Ia L
gi|1590403 4998 KSQSKSTLKARDIPSALDKALAAARQQYSMQSIADYL 5034
Peptidase_U40: domain 1 of 1, from 5017 to 5031: score -0.6, E = 8.3
*->AvAAARnqHvKEsWA<-*
A AAAR q s A
gi|1590403 5017 ALAAARQQYSMQSIA 5031
NUMOD1: domain 1 of 1, from 5026 to 5045: score 8.2, E = 0.36
*->SireAAkaLgishstInkyl<-*
S++ A++L++++++++++l
gi|1590403 5026 SMQSIADYLHMPRKSLQQHL 5045
DUF1694: domain 1 of 1, from 5036 to 5047: score 0.9, E = 8.4
*->MteddkqLddrLqq<-*
M ++ L+++L++
gi|1590403 5036 MPRKS--LQQHLDK 5047
zf-TRAF: domain 1 of 1, from 5036 to 5044: score 2.9, E = 7.2
*->mkreaLQkH<-*
m+r +LQ+H
gi|1590403 5036 MPRKSLQQH 5044
WW: domain 1 of 1, from 5143 to 5160: score 4.0, E = 3.3
CS EEECTTTCEEEEETTTTE
*->erkdpdGrpYYyNhnTkt<-*
++ d +Gr +Y+N +T++
gi|1590403 5143 VYADNSGRQFYWNSETNQ 5160
//