hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 167426692.fa
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Query sequence: gi|167426692|ref|ZP_02318445.1|
Accession: [none]
Description: putative phage minor structural protein [Yersinia pestis biovar Mediaevalis str. K1973002]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
FG-GAP FG-GAP repeat 41.7 3.4e-11 4
HemolysinCabind Hemolysin-type calcium-binding repeat 28.8 1.4e-07 3
DUF885 Bacterial protein of unknown function 3.7 0.4 1
Glyco_hydro_26 Glycosyl hydrolase family 26 4.1 0.53 1
ATP-synt ATP synthase 2.6 0.66 1
RecO Recombination protein O 3.6 0.84 1
SDH_beta Serine dehydratase beta chain 4.2 0.84 1
DUF1248 Protein of unknown function (DUF1248) 3.0 1.1 1
DUF1108 Protein of unknown function (DUF1108) 0.9 1.1 1
Cw-hydrolase Cell wall-associated hydrolase 4.0 1.2 1
CIA30 Complex I intermediate-associated pro 3.1 1.3 1
Orthopox_F7 Orthopoxvirus F7 protein 3.0 1.4 1
DUF1814 Domain of unknown function (DUF1814) 2.5 1.7 1
eIF-4B Plant specific eukaryotic initiation -1.7 1.9 1
DUF1926 Domain of unknown function (DUF1926) 2.4 1.9 1
PepSY_TM PepSY-associated TM helix 5.8 2 1
Nitr_red_assoc Conserved nitrate reductase-associate 1.7 2 1
DUF2072 Zn-ribbon containing protein (DUF2072 1.6 2.8 1
DUF867 Protein of unknown function (DUF867) 2.2 3.1 1
DUF2002 Protein of unknown function (DUF2002) 1.9 3.1 1
T-box T-box 1.1 3.4 1
DUF1195 Protein of unknown function (DUF1195) 1.7 3.5 1
Nup153 Nucleoporin Nup153-like 0.4 3.7 1
PC_rep Proteasome/cyclosome repeat 3.6 3.7 1
BRK BRK domain 3.6 3.8 1
Toprim_N DNA primase catalytic core, N-termina 2.7 3.8 1
Sas10_Utp3_C Sas10 C-terminal domain 3.5 3.9 1
Mtr2 Nuclear pore RNA shuttling protein Mt 1.2 4 1
UPF0147 Uncharacterised protein family (UPF01 3.7 4.2 1
FerA FerA (NUC095) domain 3.7 4.7 1
DUF1113 Protein of unknown function (DUF1113) 1.5 4.9 1
CUT CUT domain 2.6 4.9 1
RE_NgoPII NgoPII restriction endonuclease 1.5 5 1
Ninjurin Ninjurin 1.1 5.1 1
PSP1 PSP1 C-terminal conserved region 1.8 5.4 1
DUF2328 Uncharacterized protein conserved in 0.4 5.4 1
EST1_DNA_bind Est1 DNA/RNA binding domain 2.1 5.5 2
DUF2213 Uncharacterized protein conserved in 1.4 5.5 1
Herpes_PAP Herpesvirus polymerase accessory prot -1.0 5.7 1
Shigella_OspC Shigella flexneri OspC protein -0.1 5.7 1
Antimicrobial16 Double glycine cleavage site bacterio 2.4 5.8 1
GntP_permease GntP family permease 0.3 5.8 1
Formyl_trans_C Formyl transferase, C-terminal domain 2.0 5.8 1
Phage_sheath_1 Phage tail sheath protein -0.9 6.1 1
DUF1767 Domain of unknown function (DUF1767) 1.8 6.3 1
Lipoprotein_17 Lipoprotein associated domain 2.5 6.4 1
PKI cAMP-dependent protein kinase inhibit 1.4 6.8 1
Gp49 Phage derived protein Gp49-like (DUF8 2.7 6.9 1
FlgD Flagellar hook capping protein 1.0 7.2 1
GnsAB GnsA/GnsB family 1.9 7.4 1
OstA_C Organic solvent tolerance protein -0.2 7.4 1
DUF1451 Protein of unknown function (DUF1451) 1.3 7.8 1
RYDR_ITPR RIH domain 0.5 7.8 1
Peptidase_U57 YabG peptidase U57 0.2 8.4 1
Mqo Malate:quinone oxidoreductase (Mqo) -0.6 8.5 1
UspB Universal stress protein B (UspB) 1.6 8.5 1
Phage_integr_N Phage integrase, N-terminal SAM-like 1.6 8.6 1
ATG11 Autophagy-related protein 11 0.4 8.8 1
U3_assoc_6 U3 small nucleolar RNA-associated pro 1.7 8.8 1
SPC25 Microsomal signal peptidase 25 kDa su 0.3 8.9 1
DUF2599 Protein of unknown function (DUF2599) 0.0 9 1
TmoB Toluene-4-monooxygenase system protei 0.8 9.1 1
STAG STAG domain 0.7 9.3 1
aPHC Alkaline phytoceramidase (aPHC) -0.6 9.4 1
SIS SIS domain 1.6 9.6 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF1451 1/1 64 91 .. 1 28 [. 1.3 7.8
ATP-synt 1/1 69 79 .. 1 13 [. 2.6 0.66
FerA 1/1 76 90 .. 17 32 .. 3.7 4.7
DUF1926 1/1 113 132 .. 32 51 .. 2.4 1.9
Mqo 1/1 133 148 .. 211 227 .. -0.6 8.5
SPC25 1/1 162 178 .. 1 18 [. 0.3 8.9
T-box 1/1 245 254 .. 172 181 .. 1.1 3.4
Formyl_trans_C 1/1 253 263 .. 1 11 [. 2.0 5.8
Phage_sheath_1 1/1 287 302 .. 681 696 .] -0.9 6.1
Phage_integr_N 1/1 293 303 .. 1 11 [. 1.6 8.6
Sas10_Utp3_C 1/1 341 352 .. 67 78 .] 3.5 3.9
aPHC 1/1 388 395 .. 1 8 [. -0.6 9.4
DUF2213 1/1 396 406 .. 1 11 [. 1.4 5.5
STAG 1/1 397 420 .. 105 130 .] 0.7 9.3
ATG11 1/1 412 433 .. 1 22 [. 0.4 8.8
DUF1113 1/1 419 444 .. 225 252 .] 1.5 4.9
RE_NgoPII 1/1 488 508 .. 251 273 .] 1.5 5
DUF1195 1/1 514 553 .. 1 45 [. 1.7 3.5
Nup153 1/1 525 541 .. 539 555 .] 0.4 3.7
GnsAB 1/1 574 588 .. 1 15 [. 1.9 7.4
eIF-4B 1/1 591 600 .. 1 12 [. -1.7 1.9
DUF867 1/1 689 703 .. 1 15 [. 2.2 3.1
GntP_permease 1/1 711 731 .. 444 465 .] 0.3 5.8
PC_rep 1/1 717 727 .. 1 11 [. 3.6 3.7
DUF2328 1/1 725 747 .. 166 188 .] 0.4 5.4
PepSY_TM 1/1 730 753 .. 1 34 [] 5.8 2
UPF0147 1/1 754 766 .. 75 87 .] 3.7 4.2
Orthopox_F7 1/1 794 809 .. 67 82 .] 3.0 1.4
Cw-hydrolase 1/1 804 842 .. 1 39 [. 4.0 1.2
Herpes_PAP 1/1 911 921 .. 106 116 .. -1.0 5.7
Nitr_red_assoc 1/1 913 923 .. 136 146 .] 1.7 2
PKI 1/1 923 936 .. 1 14 [. 1.4 6.8
FG-GAP 1/4 928 953 .. 1 36 [] 8.8 0.14
Antimicrobial16 1/1 1000 1015 .. 27 42 .] 2.4 5.8
FG-GAP 2/4 1014 1044 .. 1 36 [] 9.4 0.096
TmoB 1/1 1016 1032 .. 1 19 [. 0.8 9.1
Gp49 1/1 1025 1037 .. 1 13 [. 2.7 6.9
FG-GAP 3/4 1084 1109 .. 5 36 .] 12.6 0.011
FG-GAP 4/4 1138 1165 .. 1 36 [] 10.9 0.033
DUF2072 1/1 1173 1187 .. 137 151 .] 1.6 2.8
FlgD 1/1 1175 1201 .. 124 155 .] 1.0 7.2
SIS 1/1 1262 1275 .. 1 14 [. 1.6 9.6
HemolysinCabind 1/3 1300 1310 .. 8 18 .] 7.6 0.4
DUF1767 1/1 1320 1335 .. 90 106 .] 1.8 6.3
EST1_DNA_bind 1/2 1347 1363 .. 59 75 .] 1.0 13
DUF2002 1/1 1368 1380 .. 104 116 .] 1.9 3.1
HemolysinCabind 2/3 1371 1388 .. 1 18 [] 14.9 0.0023
U3_assoc_6 1/1 1404 1419 .. 73 88 .] 1.7 8.8
Lipoprotein_17 1/1 1436 1451 .. 1 16 [. 2.5 6.4
DUF1248 1/1 1449 1459 .. 1 11 [. 3.0 1.1
OstA_C 1/1 1453 1480 .. 416 446 .] -0.2 7.4
Ninjurin 1/1 1470 1488 .. 138 156 .. 1.1 5.1
Shigella_OspC 1/1 1475 1493 .. 1 20 [. -0.1 5.7
Mtr2 1/1 1547 1556 .. 1 10 [. 1.2 4
RYDR_ITPR 1/1 1655 1681 .. 198 229 .] 0.5 7.8
UspB 1/1 1682 1695 .. 60 73 .. 1.6 8.5
HemolysinCabind 3/3 1771 1787 .. 1 18 [] 6.3 0.96
SDH_beta 1/1 1788 1804 .. 143 159 .] 4.2 0.84
BRK 1/1 1910 1930 .. 26 50 .] 3.6 3.8
DUF885 1/1 1949 1961 .. 568 580 .] 3.7 0.4
DUF2599 1/1 1974 1981 .. 1 9 [. 0.0 9
CUT 1/1 1980 1994 .. 6 20 .. 2.6 4.9
Toprim_N 1/1 1997 2032 .. 47 81 .. 2.7 3.8
PSP1 1/1 2024 2037 .. 83 96 .] 1.8 5.4
DUF1108 1/1 2053 2060 .. 79 86 .] 0.9 1.1
CIA30 1/1 2066 2077 .. 199 210 .] 3.1 1.3
Peptidase_U57 1/1 2081 2092 .. 147 158 .. 0.2 8.4
RecO 1/1 2098 2131 .. 226 259 .] 3.6 0.84
DUF1814 1/1 2100 2178 .. 238 299 .] 2.5 1.7
Glyco_hydro_26 1/1 2153 2165 .. 347 359 .] 4.1 0.53
EST1_DNA_bind 2/2 2155 2168 .. 57 71 .. 1.1 12
Alignments of top-scoring domains:
DUF1451: domain 1 of 1, from 64 to 91: score 1.3, E = 7.8
*->llerlterlklsekeLkkaveqakeylv<-*
++e l + +++ k++++++e+ +ylv
gi|1674266 64 VVELLLKDVRNKIKSVDQLIESYSQYLV 91
ATP-synt: domain 1 of 1, from 69 to 79: score 2.6, E = 0.66
CS --HHHHHHHHHHH
*->AsLKeIrdRIkSV<-*
LK++r++IkSV
gi|1674266 69 --LKDVRNKIKSV 79
FerA: domain 1 of 1, from 76 to 90: score 3.7, E = 4.7
*->lklLDQlIeDcssfpL<-*
+k++DQlIe+ s+ +L
gi|1674266 76 IKSVDQLIESYSQ-YL 90
DUF1926: domain 1 of 1, from 113 to 132: score 2.4, E = 1.9
CS EEETTTTEETT--------G
*->lDskslahNyaDvLaRrwEh<-*
+D++s+ N++D++++r+E+
gi|1674266 113 FDTYSKFENFLDIIRQRPEL 132
Mqo: domain 1 of 1, from 133 to 148: score -0.6, E = 8.5
*->RnsDGtWtVtvkdlnng<-*
RnsD+ W+++v+++ +g
gi|1674266 133 RNSDN-WQLVVANNATG 148
SPC25: domain 1 of 1, from 162 to 178: score 0.3, E = 8.9
*->dkpVKviNkwDgpavKna<-*
VKv N wD pa+ n+
gi|1674266 162 PDIVKV-NEWDLPAIANI 178
T-box: domain 1 of 1, from 245 to 254: score 1.1, E = 3.4
*->QNeeITkLKI<-*
+Ne +TkLKI
gi|1674266 245 HNELVTKLKI 254
Formyl_trans_C: domain 1 of 1, from 253 to 263: score 2.0, E = 5.8
*->kitkedgrIDW<-*
ki +e g+I W
gi|1674266 253 KIQPENGKIRW 263
Phage_sheath_1: domain 1 of 1, from 287 to 302: score -0.9, E = 6.1
*->EyitFrfviTstylvd<-*
E +t r+ ++s+yl++
gi|1674266 287 EQLTARLNQFSDYLQT 302
Phage_integr_N: domain 1 of 1, from 293 to 303: score 1.6, E = 8.6
CS HHHHHHHHHHT
*->leqFleyLsle<-*
l+qF++yL+ e
gi|1674266 293 LNQFSDYLQTE 303
Sas10_Utp3_C: domain 1 of 1, from 341 to 352: score 3.5, E = 3.9
*->GIkknvvKSvKl<-*
GI++nv+ S+K
gi|1674266 341 GIRTNVSASTKA 352
aPHC: domain 1 of 1, from 388 to 395: score -0.6, E = 9.4
*->pgrwgeqt<-*
++rwge+t
gi|1674266 388 WNRWGEIT 395
DUF2213: domain 1 of 1, from 396 to 406: score 1.4, E = 5.5
*->stRsitadGfL<-*
++R+++++G+L
gi|1674266 396 TERKKDINGRL 406
STAG: domain 1 of 1, from 397 to 420: score 0.7, E = 9.3
*->EkkKsrdnraneRvdsLnskLgirke<-*
E+kK ++r +dsL+ kL i+ +
gi|1674266 397 ERKKDINGR-LNNIDSLLDKL-ITRQ 420
ATG11: domain 1 of 1, from 412 to 433: score 0.4, E = 8.8
*->fedaVikrfkDvetLakkLqKe<-*
+ d+ i+r +v++L+kk+q++
gi|1674266 412 LLDKLITRQLSVNQLNKKQQRK 433
DUF1113: domain 1 of 1, from 419 to 444: score 1.5, E = 4.9
*->kelllfllnfnqrRllknsFpklkyslk<-*
++l+ ++ln+ q+R l+++Fp l k
gi|1674266 419 RQLSVNQLNKKQQRKLAEIFPQLT--DK 444
RE_NgoPII: domain 1 of 1, from 488 to 508: score 1.5, E = 5
*->tDkleilaedNkkleikDvrIKn<-*
tD+ +i + d + DvrIK+
gi|1674266 488 TDRWRITETDG--NTLQDVRIKS 508
DUF1195: domain 1 of 1, from 514 to 553: score 1.7, E = 3.5
*->mkaahhhhdsdalPatttsipasgtsaangkketgysalFGKGRY<-
+ a + h+ ++ P +ts+p +++n k+ t+ +FG+ +Y
gi|1674266 514 TDLATYPHSITSDPDLKTSAPEL--KTSNPKARTA---IFGRFGY 553
*
gi|1674266 - -
Nup153: domain 1 of 1, from 525 to 541: score 0.4, E = 3.7
*->SsPspkreatqktansP<-*
S P +k++a++++ + P
gi|1674266 525 SDPDLKTSAPELKTSNP 541
GnsAB: domain 1 of 1, from 574 to 588: score 1.9, E = 7.4
*->MniEelkkkaEeeIa<-*
M+ +l++k EeeI+
gi|1674266 574 MSNGDLTEKQEEEIQ 588
eIF-4B: domain 1 of 1, from 591 to 600: score -1.7, E = 1.9
*->MsKpWGGiGiGA<-*
++ +WGGi GA
gi|1674266 591 LAMAWGGI--GA 600
DUF867: domain 1 of 1, from 689 to 703: score 2.2, E = 3.1
*->YssFeELkenetegk<-*
Y+ F+ L+ ++++++
gi|1674266 689 YHAFSQLATETDPHV 703
GntP_permease: domain 1 of 1, from 711 to 731: score 0.3, E = 5.8
*->TvleTIlSvvGLifvLiLlsLv<-*
+v +TI++++GL++ + + +++
gi|1674266 711 GVFSTINATIGLGVAF-AMAMG 731
PC_rep: domain 1 of 1, from 717 to 727: score 3.6, E = 3.7
*->gAilaLGliha<-*
+A+++LG+++a
gi|1674266 717 NATIGLGVAFA 727
DUF2328: domain 1 of 1, from 725 to 747: score 0.4, E = 5.4
*->lLAreaGgtisveiteeavvlsa<-*
+ A ++Ggt + +++++++ l++
gi|1674266 725 AFAMAMGGTAATAAGPAGIALAF 747
PepSY_TM: domain 1 of 1, from 730 to 753: score 5.8, E = 2
*->lgdlHrgrfggvallglllglllllllltGlvlw<-*
+g+ ++ ++g+++++l++t+++++
gi|1674266 730 MGG----------TAATAAGPAGIALAFTMIIVG 753
UPF0147: domain 1 of 1, from 754 to 766: score 3.7, E = 4.2
*->dIWeiiSeLErik<-*
dI++ +S+ Eri+
gi|1674266 754 DIYSAVSQIERIR 766
Orthopox_F7: domain 1 of 1, from 794 to 809: score 3.0, E = 1.4
*->LDiKRRYRHaiEsvYF<-*
LD + RY ++EsvY
gi|1674266 794 LDNQIRYNQTMESVYQ 809
Cw-hydrolase: domain 1 of 1, from 804 to 842: score 4.0, E = 1.2
*->mlsalilselsypAllLaeqqvhqrfvhpgPLvLkaapl<-*
m s+ + + y+All +q v+ f g vLka p+
gi|1674266 804 MESVYQRQRDYYEALLASKQGVDTLFYSRGEAVLKAIPF 842
Herpes_PAP: domain 1 of 1, from 911 to 921: score -1.0, E = 5.7
CS EEHHHHHHHHH
*->vqaKNLqQALs<-*
+q KNL+QA+s
gi|1674266 911 LQNKNLHQAFS 921
Nitr_red_assoc: domain 1 of 1, from 913 to 923: score 1.7, E = 2
*->NhNFlpAlqEF<-*
N+N+ A++E+
gi|1674266 913 NKNLHQAFSEL 923
PKI: domain 1 of 1, from 923 to 936: score 1.4, E = 6.8
*->tDVEStyadFisSg<-*
D+ Sty+ Fi S+
gi|1674266 923 LDIDSTYSPFILSA 936
FG-GAP: domain 1 of 4, from 928 to 953: score 8.8, E = 0.14
CS CCSCEEEC -TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaag.DlnGDGrpDlvvgaPgadggt.dgsvyll<-*
++s+ + D++++G++D++v +++ +
gi|1674266 928 TYSPFILSaDVDRNGLNDFIV-------INeK-----Y 953
Antimicrobial16: domain 1 of 1, from 1000 to 1015: score 2.4, E = 5.8
*->WEelLyeliliKfkit<-*
WE l + + + Kf+
gi|1674266 1000 WEKLFHAIEVDKFNEV 1015
FG-GAP: domain 2 of 4, from 1014 to 1044: score 9.4, E = 0.096
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC T SEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.d.gsvyll<-*
+ +++gD+nGD +lv+ +++d+ ++y++
gi|1674266 1014 EVVFPVLGDFNGDNVFELVI-------FHdDkMTTYHY 1044
TmoB: domain 1 of 1, from 1016 to 1032: score 0.8, E = 9.1
CS --EEEEEEEETT-SBEEEE
*->MAlFPiisnFegDFVlQLV<-*
FP+ + F gD V LV
gi|1674266 1016 --VFPVLGDFNGDNVFELV 1032
Gp49: domain 1 of 1, from 1025 to 1037: score 2.7, E = 6.9
*->GeGvfELRidygp<-*
G+ vfEL i +++
gi|1674266 1025 GDNVFELVIFHDD 1037
FG-GAP: domain 3 of 4, from 1084 to 1109: score 12.6, E = 0.011
CS EEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->vaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+++gD+n+DG++D+++ +++g +l
gi|1674266 1084 SLVGDINNDGFDDILL-------LNkSGDMLHL 1109
FG-GAP: domain 4 of 4, from 1138 to 1165: score 10.9, E = 0.033
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ s++ ++Dln DG Dlv+ + +d + ++
gi|1674266 1138 HRSQLQLTDLNKDGGLDLVI-------ILnD--GIYY 1165
DUF2072: domain 1 of 1, from 1173 to 1187: score 1.6, E = 2.8
*->EGtYviDLpSalkkk<-*
+G Y+ D pS+++k
gi|1674266 1173 DGEYHFDTPSMVNKI 1187
FlgD: domain 1 of 1, from 1175 to 1201: score 1.0, E = 7.2
*->evgLpsaAdevtvtikDaaGqvvnvelVrtid<-*
e+ ++ ++ ++tik+++G+ Vr +
gi|1674266 1175 EYHFDTPSMVNKITIKNEGGDS-----VRYQQ 1201
SIS: domain 1 of 1, from 1262 to 1275: score 1.6, E = 9.6
CS HHHHSEEEEEE-CH
*->klakakrIyliGaG<-*
++k+k+I++iG+G
gi|1674266 1262 GYHKKKNIFTIGSG 1275
HemolysinCabind: domain 1 of 3, from 1300 to 1310: score 7.6, E = 0.4
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+Gg+GnDt
gi|1674266 1300 ILSGGEGNDTV 1310
DUF1767: domain 1 of 1, from 1320 to 1335: score 1.8, E = 6.3
*->vnsirDIsqPlynqlLs<-*
++si+DIs +y+q+ +
gi|1674266 1320 IDSIIDISNGYYSQV-N 1335
EST1_DNA_bind: domain 1 of 2, from 1347 to 1363: score 1.0, E = 13
*->DYdkifssedipDrLvG<-*
D++ i++ e++ D ++G
gi|1674266 1347 DFENILGHENVNDTIIG 1363
DUF2002: domain 1 of 1, from 1368 to 1380: score 1.9, E = 3.1
*->ryLnrlFGDEKtd<-*
+yLn++ GD+K
gi|1674266 1368 NYLNGMGGDDKIW 1380
HemolysinCabind: domain 2 of 3, from 1371 to 1388: score 14.9, E = 0.0023
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +G+D + G++GnD+l
gi|1674266 1371 NGMGGDDKIWGNGGNDLL 1388
U3_assoc_6: domain 1 of 1, from 1404 to 1419: score 1.7, E = 8.8
*->kkfknsisdysiqrrI<-*
+++ +s+++ s+q rI
gi|1674266 1404 YHILKSTHEKSLQIRI 1419
Lipoprotein_17: domain 1 of 1, from 1436 to 1451: score 2.5, E = 6.4
*->eLeeeinkIssielke<-*
Le ++n+I+siel +
gi|1674266 1436 FLEHKLNQIKSIELDN 1451
DUF1248: domain 1 of 1, from 1449 to 1459: score 3.0, E = 1.1
*->rddVDvviNPd<-*
+d++Dv+iN++
gi|1674266 1449 LDNIDVLININ 1459
OstA_C: domain 1 of 1, from 1453 to 1480: score -0.2, E = 7.4
*->ddpdyntatnsgqdkisqiglsaqwplarnW<-*
d +++++++n++ + qi+l++ +++++n
gi|1674266 1453 DVLININNDNGF---MTQIRLVGVYNINNNQ 1480
Ninjurin: domain 1 of 1, from 1470 to 1488: score 1.1, E = 5.1
*->figrLnlnrvedqrrlnrl<-*
+ g +n+n++++q ln++
gi|1674266 1470 LVGVYNINNNQKQQVLNFT 1488
Shigella_OspC: domain 1 of 1, from 1475 to 1493: score -0.1, E = 5.7
*->vEisnHqkklPLnkkHHtvD<-*
i n qk+ Ln + tvD
gi|1674266 1475 -NINNNQKQQVLNFTIQTVD 1493
Mtr2: domain 1 of 1, from 1547 to 1556: score 1.2, E = 4
CS EECCTT....
*->ngqtQqQVTH<-*
ng +QqQVTH
gi|1674266 1547 NGYQQQQVTH 1556
RYDR_ITPR: domain 1 of 1, from 1655 to 1681: score 0.5, E = 7.8
CS XXXXXXXXXXX.....XXXXXXXXXXXXXXXX
*->lickevlnpGesVEENaDlLiqtnlraseasl<-*
l+c +v++++ DlL+++++ ++
gi|1674266 1655 LLC-DVIVERS----DDDLLLRYRDQPEKHQS 1681
UspB: domain 1 of 1, from 1682 to 1695: score 1.6, E = 8.5
*->vRLfhYIksqeYlh<-*
+RL++Y + ++Y h
gi|1674266 1682 IRLVNYMNDERYRH 1695
HemolysinCabind: domain 3 of 3, from 1771 to 1787: score 6.3, E = 0.96
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +G L Gg+G+Dt+
gi|1674266 1771 RGHEGT-MLKGGGGDDTY 1787
SDH_beta: domain 1 of 1, from 1788 to 1804: score 4.2, E = 0.84
*->YySiGGGfIvdeehfGl<-*
YyS G G+I + +++Gl
gi|1674266 1788 YYSAGSGAINIADTSGL 1804
BRK: domain 1 of 1, from 1910 to 1930: score 3.6, E = 3.8
*->klkdLerWLqenPgYevdlafiPrs<-*
+l+++++W+ nP Y+v+ + +
gi|1674266 1910 QLRTIKAWVTKNPIYDVA----DLD 1930
DUF885: domain 1 of 1, from 1949 to 1961: score 3.7, E = 0.4
*->PLdvLEqkvdrwI<-*
PL++ Eqk+d+++
gi|1674266 1949 PLPLIEQKIDAFF 1961
DUF2599: domain 1 of 1, from 1974 to 1981: score 0.0, E = 9
*->IdhatWaqw<-*
+h+tW+q+
gi|1674266 1974 -EHVTWIQR 1981
CUT: domain 1 of 1, from 1980 to 1994: score 2.6, E = 4.9
CS XXX---SHHHHHHHH
*->mneeldTaeIarrVk<-*
+ ee dT++Ia++Vk
gi|1674266 1980 QREEFDTVDIAKWVK 1994
Toprim_N: domain 1 of 1, from 1997 to 2032: score 2.7, E = 3.8
CS HHHHHT-HHHHHTTT-EE-SST..T--EET TTTEE
*->fLkkkgfdeelLleaGLlsknenggkfyDr.FrnRi<-*
+L++++ + lL+++GLl+++ +k D++F+nRi
gi|1674266 1997 HLRSQNEINYLLEQLGLLKESPLSDKALDFtFKNRI 2032
PSP1: domain 1 of 1, from 2024 to 2037: score 1.8, E = 5.4
*->LakvfktRIELRQI<-*
L ++fk RI L+Q
gi|1674266 2024 LDFTFKNRIDLAQA 2037
DUF1108: domain 1 of 1, from 2053 to 2060: score 0.9, E = 1.1
*->LINLVMkW<-*
LINL Mk
gi|1674266 2053 LINLAMKY 2060
CIA30: domain 1 of 1, from 2066 to 2077: score 3.1, E = 1.3
*->GpFeLeidsIka<-*
G+FeL+i I++
gi|1674266 2066 GHFELLISNIQV 2077
Peptidase_U57: domain 1 of 1, from 2081 to 2092: score 0.2, E = 8.4
*->vGvhvsEkEqPE<-*
+Gv+vsE EqP+
gi|1674266 2081 YGVVVSESEQPL 2092
RecO: domain 1 of 1, from 2098 to 2131: score 3.6, E = 0.84
*->akLkplldskleesslvERlyelsrsflprrelL<-*
+ L +++ +k +++ v Rl e + sf++ +lL
gi|1674266 2098 IDLRQYFNQKNLTKDHVGRLAEHDMSFDELTLLL 2131
DUF1814: domain 1 of 1, from 2100 to 2178: score 2.5, E = 1.7
*->ikrtflerllalhkflfysrkdedfdgil.aeaa.gllllapwlefl
++ f +++l++++ +++++d fd+ + ++ + ++a+++++
gi|1674266 2100 LRQYFNQKNLTKDHVGRLAEHDMSFDELTlLLDKnIPIEQAFTQRLQ 2146
kei.la..............ltedyeeflesl<-*
++++++ ++++ ++++ + +d++ ++e +
gi|1674266 2147 TQLgPLklfndervfnkgdvFDQDISQLAEAM 2178
Glyco_hydro_26: domain 1 of 1, from 2153 to 2165: score 4.1, E = 0.53
CS H..........ST
*->alynsswVlnkDE<-*
+l+n+++V nk+
gi|1674266 2153 KLFNDERVFNKGD 2165
EST1_DNA_bind: domain 2 of 2, from 2155 to 2168: score 1.1, E = 12
*->FNDYdkifssedipD<-*
FND + +f+++d+ D
gi|1674266 2155 FND-ERVFNKGDVFD 2168
//