hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 189347357.fa
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Query sequence: gi|189347357|ref|YP_001943886.1|
Accession: [none]
Description: Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
HemolysinCabind Hemolysin-type calcium-binding repeat 828.7 4.6e-250 71
Cytochrom_C_2 Cytochrome C' 13.3 0.0011 3
W_rich_C Tryptophan-rich Synechocystis species 7.9 0.044 3
ABC_transp_aux ABC-type uncharacterized transport sy 6.5 0.15 1
FlgD Flagellar hook capping protein 4.8 0.46 1
Viral_Rep_C Viral replication domain C-terminal 4.5 0.77 6
Exonuc_VIII Enterobacterial exodeoxyribonuclease 3.8 0.82 1
Hepar_II_III Heparinase II/III-like protein 4.2 1.1 3
PQQ_C Pyrrolo-quinoline quinone coenzyme C- 6.7 1.2 4
GSPII_G Bacterial type II secretion system pr 3.0 2.3 1
DUF1769 Protein of unknown function (DUF1769) 3.3 3.5 1
DsrD Dissimilatory sulfite reductase D (Ds 2.6 3.6 1
AOX Alternative oxidase 0.2 3.8 1
DnaB_bind DnaB-helicase binding domain of prima 4.5 4 1
Clavanin Clavanin 2.2 4 1
OstA OstA-like protein 1.9 4.4 3
B_lectin D-mannose binding lectin 2.5 4.7 3
DUF863 Plant protein of unknown function (DU -2.5 5.3 1
DUF1565 Protein of unknown function (DUF1565) -0.2 5.6 1
PD40 WD40-like Beta Propeller Repeat 2.1 6.2 3
XPG_I XPG I-region 1.7 9.2 2
adh_short short chain dehydrogenase 0.8 9.2 1
ArsR ArsR transcriptional regulator 0.7 9.5 1
RRM_3 RNA binding motif 2.5 9.7 2
P68HR P68HR (NUC004) repeat 2.4 10 2
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DnaB_bind 1/1 39 56 .. 42 59 .] 4.5 4
adh_short 1/1 109 126 .. 164 181 .] 0.8 9.2
HemolysinCabind 1/71 166 183 .. 1 18 [] 11.8 0.021
DUF1565 1/1 168 180 .. 1 15 [. -0.2 5.6
DsrD 1/1 182 190 .. 66 74 .] 2.6 3.6
HemolysinCabind 2/71 184 201 .. 1 18 [] 21.3 2.8e-05
HemolysinCabind 3/71 202 219 .. 1 18 [] 21.2 3e-05
HemolysinCabind 4/71 220 228 .. 1 9 [. 6.5 0.87
HemolysinCabind 5/71 229 246 .. 1 18 [] 21.8 2e-05
HemolysinCabind 6/71 310 327 .. 1 18 [] 25.2 1.8e-06
HemolysinCabind 7/71 332 347 .. 3 18 .] 13.5 0.0065
HemolysinCabind 8/71 348 365 .. 1 18 [] 14.1 0.0042
OstA 1/3 370 389 .. 164 183 .] 1.6 5.6
P68HR 1/2 374 391 .. 18 35 .] 0.5 34
HemolysinCabind 9/71 412 429 .. 1 18 [] 16.2 0.001
HemolysinCabind 10/71 430 447 .. 1 18 [] 17.4 0.00041
HemolysinCabind 11/71 448 465 .. 1 18 [] 21.4 2.6e-05
HemolysinCabind 12/71 472 487 .. 3 18 .] 19.2 0.00012
HemolysinCabind 13/71 488 505 .. 1 18 [] 17.3 0.00046
HemolysinCabind 14/71 506 523 .. 1 18 [] 13.9 0.0049
HemolysinCabind 15/71 524 541 .. 1 18 [] 12.8 0.01
P68HR 2/2 548 569 .. 14 35 .] 1.9 14
HemolysinCabind 16/71 591 608 .. 1 18 [] 24.5 2.9e-06
HemolysinCabind 17/71 609 626 .. 1 18 [] 14.4 0.0034
GSPII_G 1/1 613 630 .. 96 114 .] 3.0 2.3
ArsR 1/1 628 636 .. 1 9 [. 0.7 9.5
FlgD 1/1 631 678 .. 99 155 .] 4.8 0.46
Exonuc_VIII 1/1 656 664 .. 195 203 .] 3.8 0.82
HemolysinCabind 18/71 685 702 .. 1 18 [] 18.1 0.00026
HemolysinCabind 19/71 703 720 .. 1 18 [] 20.2 5.7e-05
XPG_I 1/2 707 713 .. 97 103 .] 0.9 16
HemolysinCabind 20/71 724 741 .. 1 18 [] 13.1 0.0083
HemolysinCabind 21/71 742 759 .. 1 18 [] 6.7 0.76
HemolysinCabind 22/71 769 782 .. 1 14 [. 4.9 2.6
PD40 1/3 778 797 .. 17 41 .] 0.7 18
Viral_Rep_C 1/6 780 788 .. 1 9 [. 0.7 11
HemolysinCabind 23/71 787 797 .. 1 11 [. 5.8 1.4
B_lectin 1/3 801 828 .. 1 27 [. 0.8 13
HemolysinCabind 24/71 805 818 .. 1 14 [. 0.6 52
OstA 2/3 815 846 .. 97 127 .. 0.2 14
HemolysinCabind 25/71 825 835 .. 1 11 [. 5.6 1.6
HemolysinCabind 26/71 841 851 .. 8 18 .] 2.0 20
Cytochrom_C_2 1/3 848 864 .. 1 18 [. 4.6 0.56
Hepar_II_III 1/3 853 875 .. 145 170 .] 1.4 6.9
HemolysinCabind 27/71 859 869 .. 8 18 .] 5.9 1.2
W_rich_C 1/3 873 885 .. 1 13 [. 2.6 2.1
HemolysinCabind 28/71 879 892 .. 1 14 [. 6.2 1
Viral_Rep_C 2/6 890 898 .. 1 9 [. 0.7 11
HemolysinCabind 29/71 897 907 .. 1 11 [. 5.9 1.3
PQQ_C 1/4 914 932 .. 4 22 .] 1.9 27
RRM_3 1/2 930 948 .. 1 19 [. 0.8 26
HemolysinCabind 30/71 936 949 .. 1 14 [. 9.3 0.12
HemolysinCabind 31/71 955 972 .. 1 18 [] 22.2 1.4e-05
HemolysinCabind 32/71 973 990 .. 1 18 [] 23.1 8.1e-06
HemolysinCabind 33/71 994 1011 .. 1 18 [] 14.7 0.0027
HemolysinCabind 34/71 1012 1029 .. 1 18 [] 6.7 0.76
HemolysinCabind 35/71 1039 1052 .. 1 14 [. 4.9 2.6
PD40 2/3 1048 1067 .. 17 41 .] 0.7 18
Viral_Rep_C 3/6 1050 1058 .. 1 9 [. 0.7 11
HemolysinCabind 36/71 1057 1067 .. 1 11 [. 5.8 1.4
B_lectin 2/3 1071 1098 .. 1 27 [. 0.8 13
HemolysinCabind 37/71 1075 1088 .. 1 14 [. 0.6 52
HemolysinCabind 38/71 1095 1105 .. 1 11 [. 5.6 1.6
HemolysinCabind 39/71 1111 1121 .. 8 18 .] 2.8 11
Cytochrom_C_2 2/3 1118 1134 .. 1 18 [. 4.0 0.85
Hepar_II_III 2/3 1123 1145 .. 145 170 .] 1.4 6.9
HemolysinCabind 40/71 1129 1139 .. 8 18 .] 5.9 1.2
W_rich_C 2/3 1143 1155 .. 1 13 [. 2.6 2.1
HemolysinCabind 41/71 1149 1162 .. 1 14 [. 6.2 1
Viral_Rep_C 4/6 1160 1168 .. 1 9 [. 0.7 11
HemolysinCabind 42/71 1167 1177 .. 1 11 [. 5.9 1.3
PQQ_C 2/4 1184 1202 .. 4 22 .] 1.2 42
RRM_3 2/2 1200 1218 .. 1 19 [. 1.7 15
HemolysinCabind 43/71 1206 1217 .. 1 12 [. 6.1 1.1
HemolysinCabind 44/71 1225 1242 .. 1 18 [] 21.6 2.2e-05
HemolysinCabind 45/71 1243 1260 .. 1 18 [] 20.2 5.7e-05
XPG_I 2/2 1247 1253 .. 97 103 .] 0.9 16
HemolysinCabind 46/71 1264 1281 .. 1 18 [] 12.2 0.016
HemolysinCabind 47/71 1282 1299 .. 1 18 [] 6.7 0.76
HemolysinCabind 48/71 1309 1322 .. 1 14 [. 4.9 2.6
PD40 3/3 1318 1337 .. 17 41 .] 0.7 18
Viral_Rep_C 5/6 1320 1328 .. 1 9 [. 0.7 11
HemolysinCabind 49/71 1327 1337 .. 1 11 [. 5.8 1.4
B_lectin 3/3 1341 1368 .. 1 27 [. 0.8 13
HemolysinCabind 50/71 1345 1358 .. 1 14 [. 0.6 52
OstA 3/3 1355 1386 .. 97 127 .. 0.2 14
HemolysinCabind 51/71 1365 1375 .. 1 11 [. 5.6 1.6
HemolysinCabind 52/71 1381 1391 .. 8 18 .] 2.0 20
Cytochrom_C_2 3/3 1388 1404 .. 1 18 [. 4.6 0.56
Hepar_II_III 3/3 1393 1415 .. 145 170 .] 1.4 6.9
HemolysinCabind 53/71 1399 1409 .. 8 18 .] 5.9 1.2
W_rich_C 3/3 1413 1425 .. 1 13 [. 2.6 2.1
HemolysinCabind 54/71 1419 1432 .. 1 14 [. 6.2 1
Viral_Rep_C 6/6 1430 1438 .. 1 9 [. 0.7 11
HemolysinCabind 55/71 1437 1447 .. 1 11 [. 5.9 1.3
DUF863 1/1 1448 1460 .. 1 13 [. -2.5 5.3
PQQ_C 3/4 1452 1472 .. 2 22 .] 3.1 13
HemolysinCabind 56/71 1455 1468 .. 1 14 [. 0.1 73
HemolysinCabind 57/71 1476 1489 .. 1 14 [. 7.7 0.36
HemolysinCabind 58/71 1495 1512 .. 1 18 [] 21.8 1.9e-05
HemolysinCabind 59/71 1513 1530 .. 1 18 [] 17.6 0.00036
DUF1769 1/1 1526 1534 .. 1 9 [. 3.3 3.5
HemolysinCabind 60/71 1531 1548 .. 1 18 [] 15.7 0.0013
PQQ_C 4/4 1546 1557 .. 11 22 .] 0.5 67
HemolysinCabind 61/71 1549 1564 .. 1 16 [. 10.2 0.065
HemolysinCabind 62/71 1567 1584 .. 1 18 [] 18.4 0.00021
HemolysinCabind 63/71 1585 1597 .. 1 13 [. 11.5 0.026
HemolysinCabind 64/71 1602 1619 .. 1 18 [] 20.7 4.3e-05
HemolysinCabind 65/71 1620 1637 .. 1 18 [] 13.7 0.0056
HemolysinCabind 66/71 1654 1667 .. 5 18 .] 16.2 0.00097
HemolysinCabind 67/71 1668 1685 .. 1 18 [] 16.2 0.00097
HemolysinCabind 68/71 1686 1703 .. 1 18 [] 14.5 0.0031
HemolysinCabind 69/71 1704 1721 .. 1 18 [] 19.2 0.00012
HemolysinCabind 70/71 1722 1739 .. 1 18 [] 17.7 0.00033
HemolysinCabind 71/71 1747 1757 .. 8 18 .] 3.0 9.6
ABC_transp_aux 1/1 1781 1796 .. 1 16 [. 6.5 0.15
AOX 1/1 1789 1803 .. 257 275 .] 0.2 3.8
Clavanin 1/1 1823 1829 .. 74 80 .] 2.2 4
Alignments of top-scoring domains:
DnaB_bind: domain 1 of 1, from 39 to 56: score 4.5, E = 4
*->dlllqeLaeklGiddeal<-*
++++ La+k+Gid+ +l
gi|1893473 39 RQIAAALAGKTGIDSIQL 56
adh_short: domain 1 of 1, from 109 to 126: score 0.8, E = 9.2
CS HHHHHHHHHHHHHHHHHG
*->AANAfLDaLAehRraeGL<-*
A++ f+D LA + a+ +
gi|1893473 109 AGKVFVDRLASYTGADVA 126
HemolysinCabind: domain 1 of 71, from 166 to 183: score 11.8, E = 0.021
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ GnD L+G++ +Dt
gi|1893473 166 TGTPGNDALTGTSSADTM 183
DUF1565: domain 1 of 1, from 168 to 180: score -0.2, E = 5.6
*->vsGnDssnpGTnksa<-*
+ GnD + +GT +sa
gi|1893473 168 TPGND-ALTGT-SSA 180
DsrD: domain 1 of 1, from 182 to 190: score 2.6, E = 3.6
CS EEEEETTHH
*->TMYGLKGrg<-*
TMYGL G +
gi|1893473 182 TMYGLAGND 190
HemolysinCabind: domain 2 of 71, from 184 to 201: score 21.3, E = 2.8e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yG aGnDtL+G +GnD +
gi|1893473 184 YGLAGNDTLNGAGGNDSI 201
HemolysinCabind: domain 3 of 71, from 202 to 219: score 21.2, E = 3e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD+L+G G+Dtl
gi|1893473 202 DGGEGNDSLNGSTGDDTL 219
HemolysinCabind: domain 4 of 71, from 220 to 228: score 6.5, E = 0.87
CS E--SSS-EE
*->yGGaGnDtL<-*
+GG GnDtL
gi|1893473 220 IGGSGNDTL 228
HemolysinCabind: domain 5 of 71, from 229 to 246: score 21.8, E = 2e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG GnD++ Gg+GnD++
gi|1893473 229 NGGSGNDSMVGGSGNDIY 246
HemolysinCabind: domain 6 of 71, from 310 to 327: score 25.2, E = 1.8e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD+L+G aG+Dtl
gi|1893473 310 DGGEGNDSLSGSAGDDTL 327
HemolysinCabind: domain 7 of 71, from 332 to 347: score 13.5, E = 0.0065
CS -SSS-EEEEESSCGEE
*->GaGnDtLyGgaGnDtl<-*
G GnDtL+Gg+G D
gi|1893473 332 GLGNDTLNGGSGSDSM 347
HemolysinCabind: domain 8 of 71, from 348 to 365: score 14.1, E = 0.0042
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GG GnDt y ++G D +
gi|1893473 348 VGGSGNDTYYIDSGTDEI 365
OstA: domain 1 of 3, from 370 to 389: score 1.6, E = 5.6
*->gqggnsirGdkItydikegk<-*
++g +++ ++ I yd++ ++
gi|1893473 370 DGGTDRVYSSLISYDMEANV 389
P68HR: domain 1 of 2, from 374 to 391: score 0.5, E = 34
*->qnGYdsLlkrdfGskaqn<-*
++ Y+sL d ++++n
gi|1893473 374 DRVYSSLISYDMEANVEN 391
HemolysinCabind: domain 9 of 71, from 412 to 429: score 16.2, E = 0.001
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G++ +++LyGg+GnD l
gi|1893473 412 TGNDSDNVLYGGDGNDSL 429
HemolysinCabind: domain 10 of 71, from 430 to 447: score 17.4, E = 0.00041
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD+L+Gg+ nD l
gi|1893473 430 NGGDGNDSLNGGNHNDSL 447
HemolysinCabind: domain 11 of 71, from 448 to 465: score 21.4, E = 2.6e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD L+Gg+GnDtl
gi|1893473 448 NGGNGNDLLDGGEGNDTL 465
HemolysinCabind: domain 12 of 71, from 472 to 487: score 19.2, E = 0.00012
CS -SSS-EEEEESSCGEE
*->GaGnDtLyGgaGnDtl<-*
G G+DtLyG aGnD l
gi|1893473 472 GSGDDTLYGYAGNDSL 487
HemolysinCabind: domain 13 of 71, from 488 to 505: score 17.3, E = 0.00046
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +G+D+L+Gg+ nDtl
gi|1893473 488 TGYDGDDSLFGGEENDTL 505
HemolysinCabind: domain 14 of 71, from 506 to 523: score 13.9, E = 0.0049
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+GnD L+Gg G D
gi|1893473 506 SGGNGNDMLDGGMGIDSM 523
HemolysinCabind: domain 15 of 71, from 524 to 541: score 12.8, E = 0.01
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GGaGnDt y + nD+
gi|1893473 524 VGGAGNDTYYVDHANDRV 541
P68HR: domain 2 of 2, from 548 to 569: score 1.9, E = 14
*->rgtYqnGYdsLlkrdfGskaqn<-*
+gt + Y+sL + G++++n
gi|1893473 548 NGTADHVYSSLSAYTLGNNVEN 569
HemolysinCabind: domain 16 of 71, from 591 to 608: score 24.5, E = 2.9e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G+ Gn+tL+GgaGnDtl
gi|1893473 591 TGNSGNNTLSGGAGNDTL 608
HemolysinCabind: domain 17 of 71, from 609 to 626: score 14.4, E = 0.0034
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaG D++ Gg GnDt+
gi|1893473 609 NGGAGIDSMAGGTGNDTY 626
GSPII_G: domain 1 of 1, from 613 to 630: score 3.0, E = 2.3
CS TTTS--...EEE--.TT-E
*->GaDGqpGGeGtdaDpIgnW<-*
G D +GG+G+d ++n
gi|1893473 613 GIDSMAGGTGNDTY-YVND 630
ArsR: domain 1 of 1, from 628 to 636: score 0.7, E = 9.5
*->iNDPsELVP<-*
+NDP++ V+
gi|1893473 628 VNDPGDVVT 636
FlgD: domain 1 of 1, from 631 to 678: score 4.8, E = 0.46
*->pddgntivyldggg.gg.etGsvsggvevgLpsaAdevtvtikDaaG
p g+ ++ ++ggg+ +++ ++s++++ L++ + ++t+ +aG
gi|1893473 631 P--GDVVTETSGGGtADhV--YASFSYT--LTDNSYIENLTLQEGAG 671
qvvnvelVrtid<-*
++ V +
gi|1893473 672 DI-----VGIGN 678
Exonuc_VIII: domain 1 of 1, from 656 to 664: score 3.8, E = 0.82
*->hknSylqnL<-*
++nSy+ nL
gi|1893473 656 TDNSYIENL 664
HemolysinCabind: domain 18 of 71, from 685 to 702: score 18.1, E = 0.00026
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +Gn+tL+G GnDtl
gi|1893473 685 TGSNGNNTLDGALGNDTL 702
HemolysinCabind: domain 19 of 71, from 703 to 720: score 20.2, E = 5.7e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaG D L+GgaG+D+l
gi|1893473 703 DGGAGSDYLDGGAGDDWL 720
XPG_I: domain 1 of 2, from 707 to 713: score 0.9, E = 16
CS CETTSCT
*->GcDYteG<-*
G+DY +G
gi|1893473 707 GSDYLDG 713
HemolysinCabind: domain 20 of 71, from 724 to 741: score 13.1, E = 0.0083
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+G +tL+Gg+GnDt
gi|1893473 724 DAGGGSNTLDGGDGNDTV 741
HemolysinCabind: domain 21 of 71, from 742 to 759: score 6.7, E = 0.76
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G G + +GgaG+D+l
gi|1893473 742 DAGYGTQSVTGGAGDDIL 759
HemolysinCabind: domain 22 of 71, from 769 to 782: score 4.9, E = 2.6
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GG+G D+L+G G
gi|1893473 769 DGGDGADVLDGEYG 782
PD40: domain 1 of 3, from 778 to 797: score 0.7, E = 18
*->DGktivFssnrgdgddgsGsfdiyv<-*
DG + +++ ++g sG++d+y
gi|1893473 778 DGEYGTYTMTGG-----SGNDDLYG 797
Viral_Rep_C: domain 1 of 6, from 780 to 788: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 780 EYGTYTMTG 788
HemolysinCabind: domain 23 of 71, from 787 to 797: score 5.8, E = 1.4
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD LyG
gi|1893473 787 TGGSGNDDLYG 797
B_lectin: domain 1 of 3, from 801 to 828: score 0.8, E = 13
CS SSSETTSEEETTBEEEET EEEEEETTS
*->nrtyvWvANrdnpslpvs.gtLkiqsDG<-*
t ++ A dn ++ +++gt ++++DG
gi|1893473 801 GGTMSGGADDDNMYVGYGsGTVTMTGDG 828
HemolysinCabind: domain 24 of 71, from 805 to 818: score 0.6, E = 52
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GGa +D +y g G
gi|1893473 805 SGGADDDNMYVGYG 818
OstA: domain 2 of 3, from 815 to 846: score 0.2, E = 14
*->vdy.dnqikaeGsngierleAtGkpatfrqkv<-*
v y+ ++++++G++g ++le +a+ + ++
gi|1893473 815 VGYgSGTVTMTGDGGNDTLEGQNSTAVLSGDL 846
HemolysinCabind: domain 25 of 71, from 825 to 835: score 5.6, E = 1.6
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+G++GnDtL G
gi|1893473 825 TGDGGNDTLEG 835
HemolysinCabind: domain 26 of 71, from 841 to 851: score 2.0, E = 20
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+G+ GnD+
gi|1893473 841 VLSGDLGNDVV 851
Cytochrom_C_2: domain 1 of 3, from 848 to 864: score 4.6, E = 0.56
CS HHHHHHHHHHHHHHHHHH
*->edlieyRqslmklmggWa<-*
d++++R++ ++l+gg +
gi|1893473 848 NDVVDARHGTYTLTGG-E 864
Hepar_II_III: domain 1 of 3, from 853 to 875: score 1.4, E = 6.9
*->rlRtvellnkgeyivvvDevsGedrq<-*
+ R +++ g ++ +Devs++d +
gi|1893473 853 A-RHGTYTLTG--GEGDDEVSADDAT 875
HemolysinCabind: domain 27 of 71, from 859 to 869: score 5.9, E = 1.2
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
tL+Gg+G+D
gi|1893473 859 TLTGGEGDDEV 869
W_rich_C: domain 1 of 3, from 873 to 885: score 2.6, E = 2.1
*->gstgllegifGyy<-*
++tg+leg++G++
gi|1893473 873 DATGVLEGGSGND 885
HemolysinCabind: domain 28 of 71, from 879 to 892: score 6.2, E = 1
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
GG GnD+ +G G
gi|1893473 879 EGGSGNDVVDGEYG 892
Viral_Rep_C: domain 2 of 6, from 890 to 898: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 890 EYGTYTMTG 898
HemolysinCabind: domain 29 of 71, from 897 to 907: score 5.9, E = 1.3
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD +yG
gi|1893473 897 TGGTGNDEMYG 907
PQQ_C: domain 1 of 4, from 914 to 932: score 1.9, E = 27
*->gsyDpelnlvYvgtGNpsP<-*
+s ++ +l+Yvg G ++
gi|1893473 914 MSGNEDDDLMYVGYGEGAS 932
RRM_3: domain 1 of 2, from 930 to 948: score 0.8, E = 26
CS --EEEEES---SS--HHHH
*->GvilkfsGelnkdtsRedi<-*
G+ +++sG ++dt ++d+
gi|1893473 930 GASVTMSGGSGNDTLIGDL 948
HemolysinCabind: domain 30 of 71, from 936 to 949: score 9.3, E = 0.12
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GG GnDtL G+ G
gi|1893473 936 SGGSGNDTLIGDLG 949
HemolysinCabind: domain 31 of 71, from 955 to 972: score 22.2, E = 1.4e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+aGnD LyG GnDtl
gi|1893473 955 AGDAGNDELYGYTGNDTL 972
HemolysinCabind: domain 32 of 71, from 973 to 990: score 23.1, E = 8.1e-06
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaG D+L+GgaGnD+l
gi|1893473 973 DGGAGSDSLDGGAGNDWL 990
HemolysinCabind: domain 33 of 71, from 994 to 1011: score 14.7, E = 0.0027
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G+G +tL Gg+GnDt
gi|1893473 994 DAGGGSNTLEGGDGNDTV 1011
HemolysinCabind: domain 34 of 71, from 1012 to 1029: score 6.7, E = 0.76
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G G + +GgaG+D+l
gi|1893473 1012 DAGYGTQSVTGGAGDDIL 1029
HemolysinCabind: domain 35 of 71, from 1039 to 1052: score 4.9, E = 2.6
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GG+G D+L+G G
gi|1893473 1039 DGGDGADVLDGEYG 1052
PD40: domain 2 of 3, from 1048 to 1067: score 0.7, E = 18
*->DGktivFssnrgdgddgsGsfdiyv<-*
DG + +++ ++g sG++d+y
gi|1893473 1048 DGEYGTYTMTGG-----SGNDDLYG 1067
Viral_Rep_C: domain 3 of 6, from 1050 to 1058: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 1050 EYGTYTMTG 1058
HemolysinCabind: domain 36 of 71, from 1057 to 1067: score 5.8, E = 1.4
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD LyG
gi|1893473 1057 TGGSGNDDLYG 1067
B_lectin: domain 2 of 3, from 1071 to 1098: score 0.8, E = 13
CS SSSETTSEEETTBEEEET EEEEEETTS
*->nrtyvWvANrdnpslpvs.gtLkiqsDG<-*
t ++ A dn ++ +++gt ++++DG
gi|1893473 1071 GGTMSGGADDDNMYVGYGsGTVTMTGDG 1098
HemolysinCabind: domain 37 of 71, from 1075 to 1088: score 0.6, E = 52
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GGa +D +y g G
gi|1893473 1075 SGGADDDNMYVGYG 1088
HemolysinCabind: domain 38 of 71, from 1095 to 1105: score 5.6, E = 1.6
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+G++GnDtL G
gi|1893473 1095 TGDGGNDTLEG 1105
HemolysinCabind: domain 39 of 71, from 1111 to 1121: score 2.8, E = 11
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+G+aG+D+
gi|1893473 1111 VLSGDAGDDLV 1121
Cytochrom_C_2: domain 2 of 3, from 1118 to 1134: score 4.0, E = 0.85
CS HHHHHHHHHHHHHHHHHH
*->edlieyRqslmklmggWa<-*
dl+++R++ ++l+gg +
gi|1893473 1118 DDLVDARHGTYTLTGG-E 1134
Hepar_II_III: domain 2 of 3, from 1123 to 1145: score 1.4, E = 6.9
*->rlRtvellnkgeyivvvDevsGedrq<-*
+ R +++ g ++ +Devs++d +
gi|1893473 1123 A-RHGTYTLTG--GEGDDEVSADDAT 1145
HemolysinCabind: domain 40 of 71, from 1129 to 1139: score 5.9, E = 1.2
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
tL+Gg+G+D
gi|1893473 1129 TLTGGEGDDEV 1139
W_rich_C: domain 2 of 3, from 1143 to 1155: score 2.6, E = 2.1
*->gstgllegifGyy<-*
++tg+leg++G++
gi|1893473 1143 DATGVLEGGSGND 1155
HemolysinCabind: domain 41 of 71, from 1149 to 1162: score 6.2, E = 1
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
GG GnD+ +G G
gi|1893473 1149 EGGSGNDVVDGEYG 1162
Viral_Rep_C: domain 4 of 6, from 1160 to 1168: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 1160 EYGTYTMTG 1168
HemolysinCabind: domain 42 of 71, from 1167 to 1177: score 5.9, E = 1.3
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD +yG
gi|1893473 1167 TGGTGNDEMYG 1177
PQQ_C: domain 2 of 4, from 1184 to 1202: score 1.2, E = 42
*->gsyDpelnlvYvgtGNpsP<-*
+s ++ +l+Y+g G ++
gi|1893473 1184 MSGNEDDDLMYLGYGEGTS 1202
RRM_3: domain 2 of 2, from 1200 to 1218: score 1.7, E = 15
CS --EEEEES---SS--HHHH
*->GvilkfsGelnkdtsRedi<-*
G +++sG+ ++dt ++d+
gi|1893473 1200 GTSVTMSGDSGNDTLIGDL 1218
HemolysinCabind: domain 43 of 71, from 1206 to 1217: score 6.1, E = 1.1
CS E--SSS-EEEEE
*->yGGaGnDtLyGg<-*
+G+ GnDtL G+
gi|1893473 1206 SGDSGNDTLIGD 1217
HemolysinCabind: domain 44 of 71, from 1225 to 1242: score 21.6, E = 2.2e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G+aGnD LyG+ GnDtl
gi|1893473 1225 AGDAGNDELYGDTGNDTL 1242
HemolysinCabind: domain 45 of 71, from 1243 to 1260: score 20.2, E = 5.7e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaG D L+GgaG+D+l
gi|1893473 1243 DGGAGSDYLDGGAGDDWL 1260
XPG_I: domain 2 of 2, from 1247 to 1253: score 0.9, E = 16
CS CETTSCT
*->GcDYteG<-*
G+DY +G
gi|1893473 1247 GSDYLDG 1253
HemolysinCabind: domain 46 of 71, from 1264 to 1281: score 12.2, E = 0.016
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ +G +tL+Gg+GnDt
gi|1893473 1264 DAEGGSNTLDGGDGNDTV 1281
HemolysinCabind: domain 47 of 71, from 1282 to 1299: score 6.7, E = 0.76
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ G G + +GgaG+D+l
gi|1893473 1282 DAGYGTQSVTGGAGDDIL 1299
HemolysinCabind: domain 48 of 71, from 1309 to 1322: score 4.9, E = 2.6
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GG+G D+L+G G
gi|1893473 1309 DGGDGADVLDGEYG 1322
PD40: domain 3 of 3, from 1318 to 1337: score 0.7, E = 18
*->DGktivFssnrgdgddgsGsfdiyv<-*
DG + +++ ++g sG++d+y
gi|1893473 1318 DGEYGTYTMTGG-----SGNDDLYG 1337
Viral_Rep_C: domain 5 of 6, from 1320 to 1328: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 1320 EYGTYTMTG 1328
HemolysinCabind: domain 49 of 71, from 1327 to 1337: score 5.8, E = 1.4
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD LyG
gi|1893473 1327 TGGSGNDDLYG 1337
B_lectin: domain 3 of 3, from 1341 to 1368: score 0.8, E = 13
CS SSSETTSEEETTBEEEET EEEEEETTS
*->nrtyvWvANrdnpslpvs.gtLkiqsDG<-*
t ++ A dn ++ +++gt ++++DG
gi|1893473 1341 GGTMSGGADDDNMYVGYGsGTVTMTGDG 1368
HemolysinCabind: domain 50 of 71, from 1345 to 1358: score 0.6, E = 52
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GGa +D +y g G
gi|1893473 1345 SGGADDDNMYVGYG 1358
OstA: domain 3 of 3, from 1355 to 1386: score 0.2, E = 14
*->vdy.dnqikaeGsngierleAtGkpatfrqkv<-*
v y+ ++++++G++g ++le +a+ + ++
gi|1893473 1355 VGYgSGTVTMTGDGGNDTLEGQNSTAVLSGDL 1386
HemolysinCabind: domain 51 of 71, from 1365 to 1375: score 5.6, E = 1.6
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+G++GnDtL G
gi|1893473 1365 TGDGGNDTLEG 1375
HemolysinCabind: domain 52 of 71, from 1381 to 1391: score 2.0, E = 20
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+G+ GnD+
gi|1893473 1381 VLSGDLGNDVV 1391
Cytochrom_C_2: domain 3 of 3, from 1388 to 1404: score 4.6, E = 0.56
CS HHHHHHHHHHHHHHHHHH
*->edlieyRqslmklmggWa<-*
d++++R++ ++l+gg +
gi|1893473 1388 NDVVDARHGTYTLTGG-E 1404
Hepar_II_III: domain 3 of 3, from 1393 to 1415: score 1.4, E = 6.9
*->rlRtvellnkgeyivvvDevsGedrq<-*
+ R +++ g ++ +Devs++d +
gi|1893473 1393 A-RHGTYTLTG--GEGDDEVSADDAT 1415
HemolysinCabind: domain 53 of 71, from 1399 to 1409: score 5.9, E = 1.2
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
tL+Gg+G+D
gi|1893473 1399 TLTGGEGDDEV 1409
W_rich_C: domain 3 of 3, from 1413 to 1425: score 2.6, E = 2.1
*->gstgllegifGyy<-*
++tg+leg++G++
gi|1893473 1413 DATGVLEGGSGND 1425
HemolysinCabind: domain 54 of 71, from 1419 to 1432: score 6.2, E = 1
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
GG GnD+ +G G
gi|1893473 1419 EGGSGNDVVDGEYG 1432
Viral_Rep_C: domain 6 of 6, from 1430 to 1438: score 0.7, E = 11
*->EyGepvkkG<-*
EyG+++++G
gi|1893473 1430 EYGTYTMTG 1438
HemolysinCabind: domain 55 of 71, from 1437 to 1447: score 5.9, E = 1.3
CS E--SSS-EEEE
*->yGGaGnDtLyG<-*
+GG GnD +yG
gi|1893473 1437 TGGTGNDEMYG 1447
DUF863: domain 1 of 1, from 1448 to 1460: score -2.5, E = 5.3
*->vygePsmSeeskk<-*
y+++smS ++++
gi|1893473 1448 YYFSGSMSGNEDN 1460
PQQ_C: domain 3 of 4, from 1452 to 1472: score 3.1, E = 13
*->gtgsyDpelnlvYvgtGNpsP<-*
g++s ++++ +Yvg G ++
gi|1893473 1452 GSMSGNEDNDNMYVGFGEGAS 1472
HemolysinCabind: domain 56 of 71, from 1455 to 1468: score 0.1, E = 73
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+G++ nD +y g G
gi|1893473 1455 SGNEDNDNMYVGFG 1468
HemolysinCabind: domain 57 of 71, from 1476 to 1489: score 7.7, E = 0.36
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
+GG GnDt+ G+ G
gi|1893473 1476 SGGSGNDTMLGDLG 1489
HemolysinCabind: domain 58 of 71, from 1495 to 1512: score 21.8, E = 1.9e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G++GnD LyG GnDtl
gi|1893473 1495 AGDEGNDELYGYTGNDTL 1512
HemolysinCabind: domain 59 of 71, from 1513 to 1530: score 17.6, E = 0.00036
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GGaGnD G +GnD+l
gi|1893473 1513 DGGAGNDLVAGASGNDLL 1530
DUF1769: domain 1 of 1, from 1526 to 1534: score 3.3, E = 3.5
*->GddllFGND<-*
G+dll+GN+
gi|1893473 1526 GNDLLYGNE 1534
HemolysinCabind: domain 60 of 71, from 1531 to 1548: score 15.7, E = 0.0013
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
yG++G+D+ yGg G +tl
gi|1893473 1531 YGNEGDDSVYGGFGINTL 1548
PQQ_C: domain 4 of 4, from 1546 to 1557: score 0.5, E = 67
*->nlvYvgtGNpsP<-*
n++Y g GN s+
gi|1893473 1546 NTLYGGSGNDSV 1557
HemolysinCabind: domain 61 of 71, from 1549 to 1564: score 10.2, E = 0.065
CS E--SSS-EEEEESSCG
*->yGGaGnDtLyGgaGnD<-*
yGG GnD+ +Gg+ D
gi|1893473 1549 YGGSGNDSVDGGEMQD 1564
HemolysinCabind: domain 62 of 71, from 1567 to 1584: score 18.4, E = 0.00021
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G +G+Dt++G GnD++
gi|1893473 1567 FGEDGDDTIRGLYGNDVI 1584
HemolysinCabind: domain 63 of 71, from 1585 to 1597: score 11.5, E = 0.026
CS E--SSS-EEEEES
*->yGGaGnDtLyGga<-*
+GGaGnD LyGg+
gi|1893473 1585 DGGAGNDLLYGGD 1597
HemolysinCabind: domain 64 of 71, from 1602 to 1619: score 20.7, E = 4.3e-05
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+ +GnDt++GgaGnDt+
gi|1893473 1602 NSYDGNDTISGGAGNDTI 1619
HemolysinCabind: domain 65 of 71, from 1620 to 1637: score 13.7, E = 0.0056
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+G aG+D L+Gg+G+D
gi|1893473 1620 DGEAGDDFLNGGSGDDNM 1637
HemolysinCabind: domain 66 of 71, from 1654 to 1667: score 16.2, E = 0.00097
CS SS-EEEEESSCGEE
*->GnDtLyGgaGnDtl<-*
GnDt++G +GnD+l
gi|1893473 1654 GNDTMFGEDGNDIL 1667
HemolysinCabind: domain 67 of 71, from 1668 to 1685: score 16.2, E = 0.00097
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG nD+L+GgaGnD l
gi|1893473 1668 DGGLDNDSLDGGAGNDYL 1685
HemolysinCabind: domain 68 of 71, from 1686 to 1703: score 14.5, E = 0.0031
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GGaG+D L+ +Gn+tl
gi|1893473 1686 EGGAGDDFLRDLSGNNTL 1703
HemolysinCabind: domain 69 of 71, from 1704 to 1721: score 19.2, E = 0.00012
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
GGaGnD L+Gga nD l
gi|1893473 1704 MGGAGNDYLDGGAENDYL 1721
HemolysinCabind: domain 70 of 71, from 1722 to 1739: score 17.7, E = 0.00033
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G DtL G +GnD+l
gi|1893473 1722 DGGEGADTLLGWDGNDVL 1739
HemolysinCabind: domain 71 of 71, from 1747 to 1757: score 3.0, E = 9.6
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+++Gg+G Dtl
gi|1893473 1747 VIDGGNGIDTL 1757
ABC_transp_aux: domain 1 of 1, from 1781 to 1796: score 6.5, E = 0.15
*->RlDLTenkrYTLSpqT<-*
+DLT+n+ +TLS T
gi|1893473 1781 AIDLTANGNHTLSNVT 1796
AOX: domain 1 of 1, from 1789 to 1803: score 0.2, E = 3.8
*->NHTlanLdqkekeLdpNPF<-*
NHTl+n d++ +
gi|1893473 1789 NHTLSNVTAA----DVAAY 1803
Clavanin: domain 1 of 1, from 1823 to 1829: score 2.2, E = 4
*->WYDtGDq<-*
W DtGDq
gi|1893473 1823 WSDTGDQ 1829
//