hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 197752346.fa
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Query sequence: gi|197752346|ref|YP_002175744.1|
Accession: [none]
Description: RTX toxin RtxA [Vibrio cholerae AM-19226]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
RtxA RtxA repeat 767.5 5.1e-228 48
HemolysinCabind Hemolysin-type calcium-binding repeat 28.2 2.2e-07 7
Abhydrolase_1 alpha/beta hydrolase fold 21.4 1e-05 1
Glyco_hydro_16 Glycosyl hydrolases family 16 13.3 0.0017 2
SOR Sulphur oxygenase reductase 8.1 0.036 1
CBM_4_9 Carbohydrate binding domain 9.2 0.037 1
Adeno_shaft Adenoviral fibre protein (repeat/shaf 11.4 0.057 3
DUF2190 Uncharacterized conserved protein (DU 7.5 0.12 1
Abhydrolase_3 alpha/beta hydrolase fold 5.0 0.5 1
Flp_Fap Flp/Fap pilin component 7.6 0.5 1
TraH_2 TraH_2 2.8 0.54 1
Spore_III_AE Stage III sporulation protein AE (spo 4.8 0.56 1
CBM_6 Carbohydrate binding module (family 6 4.2 0.63 1
LTV Low temperature viability protein 3.4 0.66 1
DUF515 Protein of unknown function (DUF515) 3.3 0.68 1
DUF2019 Domain of unknown function (DUF2019) 4.6 0.68 1
Ring_hydroxyl_B Ring hydroxylating beta subunit 4.5 0.7 1
DUF2159 Predicted secreted (periplasmic) prot 4.4 1 1
TPD52 Tumour protein D52 family 3.7 1 1
EsxB Virulence factor EsxB 4.0 1.1 1
Hydrolase haloacid dehalogenase-like hydrolase 3.9 1.1 2
DNA_mis_repair DNA mismatch repair protein, C-termin 4.3 1.1 1
Big_2 Bacterial Ig-like domain (group 2) 4.6 1.2 1
DegV Uncharacterised protein, DegV family 3.6 1.2 1
L27_1 L27_1 3.2 1.2 1
Peptidase_M6 Immune inhibitor A peptidase M6 1.1 1.3 1
DUF411 Protein of unknown function, DUF 1.0 1.4 1
CBM49 Carbohydrate binding domain CBM49 4.1 1.6 1
Terminase_1 Phage Terminase 1.1 1.6 1
PKD PKD domain 3.4 1.7 1
DUF2286 Uncharacterized protein conserved in 4.2 1.7 1
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogen 0.4 1.8 1
DUF2411 Domain of unknown function (DUF2411) 5.5 1.8 1
DUF1732 Domain of unknown function (DUF1732) 3.8 1.9 1
ATP-synt_B ATP synthase B/B' CF(0) 3.9 2 1
XLF XLF (XRCC4-like factor) 3.0 2.1 1
Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd 3.7 2.1 1
EspB Enterobacterial EspB protein -0.1 2.2 1
OmpA OmpA family 3.9 2.4 1
PilN Fimbrial assembly protein (PilN) 2.3 2.4 1
Thioesterase Thioesterase domain 2.4 2.4 1
DUF2134 Predicted membrane protein (DUF2134) 3.0 2.6 1
zf-CHC2 CHC2 zinc finger 3.6 2.7 1
Abhydrolase_2 Phospholipase/Carboxylesterase 2.5 3 1
PGAP1 PGAP1-like protein 2.0 3 1
BAT2_N BAT2 N-terminus 1.7 3 1
DUF1417 Protein of unknown function (DUF1417) 3.4 3.1 1
HisKA_2 Histidine kinase 2.9 3.1 1
DUF936 Plant protein of unknown function (DU -0.1 3.1 1
Sec_GG SecD/SecF GG Motif 3.8 3.2 1
PalH PalH/RIM21 0.9 3.2 1
Peptidase_C9 Peptidase family C9 0.4 3.3 1
PYST-C1 Plasmodium yoelii subtelomeric region 2.2 3.6 1
TM_helix Conserved TM helix 3.6 3.7 1
Spc24 Spc24 subunit of Ndc80 3.2 3.7 1
CRISPR_Cse1 CRISPR-associated protein Cse1 (CRISP 0.9 4 1
FTP Fungalysin/Thermolysin Propeptide Mot 3.5 4.1 1
M M protein repeat 5.3 4.1 1
Autotransporter Autotransporter beta-domain 1.7 4.2 1
DUF1623 Protein of unknown function (DUF1623) 2.2 4.3 1
SecB Preprotein translocase subunit SecB 1.7 4.3 1
OPA3 Optic atrophy 3 protein (OPA3) 2.7 4.4 1
CCG Cysteine-rich domain 3.5 4.4 1
Leuk-A4-hydro_C Leukotriene A4 hydrolase, C-terminal 1.5 4.5 1
VWA_CoxE VWA domain containing CoxE-like prote 1.7 4.6 1
SCO1-SenC SCO1/SenC 1.5 4.7 1
Homo_sperm_syn Homospermidine synthase -0.7 4.7 1
Tir_receptor_C Translocated intimin receptor (Tir) C 0.7 5.2 1
CP12 CP12 domain 2.1 5.5 1
DeoC DeoC/LacD family aldolase 0.7 5.6 1
Antimicrobial_8 Uperin family 4.0 5.7 1
DUF23 Domain of unknown function 0.9 5.7 1
SURF4 SURF4 family 0.5 5.7 1
Paramyxo_P Paramyxovirinae P phosphoprotein C-te 0.7 5.8 1
Hep_Hag Hep_Hag 4.1 6 2
DUF918 Nucleopolyhedrovirus protein of unkno 1.8 6 1
Alpha_kinase Alpha-kinase family -0.1 6.1 1
SPOR Sporulation related domain 2.0 6.1 1
Phage-tail_2 Baseplate structural protein, domain 1.9 6.3 1
ANF_receptor Receptor family ligand binding region 0.1 6.4 1
DUF679 Protein of unknown function (DUF679) 0.7 6.6 1
Cas_TM1812 CRISPR-associated protein (cas_TM1812 0.6 6.8 1
ubiquitin Ubiquitin family 2.4 6.8 1
PCMT Protein-L-isoaspartate(D-aspartate) O 0.7 7 2
Sigma54_DBD Sigma-54, DNA binding domain 1.5 7.4 1
DUF642 Protein of unknown function, DUF642 -0.9 7.4 1
DIRP DIRP 2.1 7.5 1
RPAP1_C RPAP1-like, C-terminal 1.9 7.5 1
DUF842 Eukaryotic protein of unknown functio 1.4 7.8 1
Chlor_dismutase Chlorite dismutase 1.0 7.9 1
ThiC ThiC family -0.5 8.2 1
Saf-Nte_pilin Saf-pilin pilus formation protein 0.9 8.2 1
SecA_PP_bind SecA preprotein cross-linking domain 1.3 8.5 1
Enhancin Viral enhancin protein -0.4 8.6 1
DUF469 Protein with unknown function (DUF469 -0.5 8.8 1
DUF1786 Putative pyruvate format-lyase activa -1.0 8.8 1
H-kinase_dim Signal transducing histidine kinase, 2.1 8.9 1
CDC37_C Cdc37 C terminal domain 1.5 9 1
YiaAB yiaA/B two helix domain 1.9 9 1
Arch_fla_DE Archaeal flagella protein 0.6 9.1 1
GET2 GET complex subunit GET2 -0.8 9.2 1
Phge_rel_HI1409 Phage-related protein (Phge_rel_HI140 1.2 9.3 1
Herpes_MCP Herpes virus major capsid protein -2.6 9.4 1
DUF1655 Protein of unknown function (DUF1655) 1.8 9.4 1
Fimbrial Fimbrial protein 0.5 9.6 1
CheC CheC-like family 3.1 9.7 1
Tat Transactivating regulatory protein (T 2.0 9.7 1
B1 Protein L b1 domain 0.4 9.7 1
Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase -1.3 9.8 1
VirB VirB/Tra/Trw family 1.5 10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Homo_sperm_syn 1/1 36 46 .. 1 11 [. -0.7 4.7
HemolysinCabind 1/7 67 79 .. 1 13 [. 4.4 3.6
RtxA 1/48 95 112 .. 1 19 [] 14.8 0.0032
ANF_receptor 1/1 109 132 .. 382 410 .. 0.1 6.4
RtxA 2/48 114 132 .. 1 19 [] 14.0 0.0056
RtxA 3/48 134 152 .. 1 19 [] 18.3 0.00029
RtxA 4/48 154 172 .. 1 19 [] 17.7 0.00044
RtxA 5/48 174 198 .. 1 19 [] 15.5 0.002
RtxA 6/48 200 218 .. 1 19 [] 17.5 0.0005
RtxA 7/48 220 238 .. 1 19 [] 17.1 0.00065
RtxA 8/48 268 286 .. 1 19 [] 15.9 0.0015
RtxA 9/48 288 306 .. 1 19 [] 15.2 0.0025
SOR 1/1 353 373 .. 1 21 [. 8.1 0.036
ubiquitin 1/1 411 432 .. 58 78 .] 2.4 6.8
Peptidase_M6 1/1 494 510 .. 687 703 .] 1.1 1.3
SURF4 1/1 562 579 .. 1 18 [. 0.5 5.7
DUF2190 1/1 580 593 .. 99 112 .] 7.5 0.12
RtxA 10/48 594 612 .. 1 19 [] 15.4 0.0021
Fimbrial 1/1 608 614 .. 1 7 [. 0.5 9.6
RtxA 11/48 614 632 .. 1 19 [] 16.9 0.00075
RtxA 12/48 634 652 .. 1 19 [] 25.1 2.7e-06
RtxA 13/48 654 672 .. 1 19 [] 16.0 0.0014
Ring_hydroxyl_B 1/1 658 687 .. 107 138 .. 4.5 0.7
RtxA 14/48 674 692 .. 1 19 [] 14.0 0.0055
YiaAB 1/1 693 707 .. 39 53 .] 1.9 9
RtxA 15/48 712 730 .. 1 19 [] 6.9 0.75
RtxA 16/48 731 748 .. 1 19 [] 19.6 0.00012
RtxA 17/48 751 767 .. 2 19 .] 13.9 0.0059
RtxA 18/48 769 787 .. 1 19 [] 15.7 0.0017
RtxA 19/48 792 810 .. 1 19 [] 19.8 0.0001
DUF1786 1/1 811 817 .. 1 7 [. -1.0 8.8
RtxA 20/48 811 829 .. 1 19 [] 21.0 4.6e-05
RtxA 21/48 830 847 .. 1 19 [] 16.9 0.00078
Sec_GG 1/1 831 846 .. 19 34 .] 3.8 3.2
PCMT 1/2 849 862 .. 139 152 .. 0.7 7.2
RtxA 22/48 849 867 .. 1 19 [] 20.8 5.4e-05
RtxA 23/48 868 886 .. 1 19 [] 17.1 0.00068
Spore_III_AE 1/1 883 894 .. 317 328 .] 4.8 0.56
RtxA 24/48 887 905 .. 1 19 [] 17.4 0.00052
RtxA 25/48 906 924 .. 1 19 [] 15.2 0.0024
RPAP1_C 1/1 909 920 .. 69 80 .] 1.9 7.5
DUF1623 1/1 916 933 .. 37 55 .. 2.2 4.3
Herpes_MCP 1/1 923 935 .. 1 13 [. -2.6 9.4
RtxA 26/48 925 943 .. 1 19 [] 16.4 0.0011
Hydrolase 1/2 934 958 .. 160 184 .] 3.7 1.2
RtxA 27/48 944 962 .. 1 19 [] 15.2 0.0025
RtxA 28/48 963 981 .. 1 19 [] 14.8 0.0033
RtxA 29/48 982 1000 .. 1 19 [] 18.3 0.00029
RtxA 30/48 1001 1019 .. 1 19 [] 21.4 3.5e-05
Phge_rel_HI1409 1/1 1002 1016 .. 1 15 [. 1.2 9.3
RtxA 31/48 1021 1038 .. 2 19 .] 13.1 0.01
RtxA 32/48 1039 1056 .. 1 19 [] 16.0 0.0015
DegV 1/1 1045 1061 .. 204 220 .] 3.6 1.2
RtxA 33/48 1058 1075 .. 1 19 [] 12.7 0.014
Antimicrobial_8 1/1 1068 1084 .. 1 17 [] 4.0 5.7
RtxA 34/48 1077 1095 .. 1 19 [] 17.1 0.00066
RtxA 35/48 1097 1114 .. 2 19 .] 14.9 0.0031
PCMT 2/2 1120 1130 .. 143 153 .. 0.0 11
RtxA 36/48 1120 1134 .. 5 19 .] 7.7 0.43
RtxA 37/48 1135 1153 .. 1 19 [] 17.9 0.00039
Adeno_shaft 1/3 1140 1152 .. 18 30 .] 4.9 3.6
RtxA 38/48 1154 1172 .. 1 19 [] 16.7 0.00085
RtxA 39/48 1173 1191 .. 1 19 [] 20.2 7.9e-05
RtxA 40/48 1194 1210 .. 3 19 .] 11.9 0.023
Glyco_hydro_16 1/2 1204 1229 .. 1 30 [. 5.2 0.39
RtxA 41/48 1211 1229 .. 1 19 [] 21.2 4e-05
Ins_P5_2-kin 1/1 1228 1237 .. 1 10 [. -1.3 9.8
RtxA 42/48 1230 1248 .. 1 19 [] 15.3 0.0023
Glyco_hydro_16 2/2 1242 1269 .. 1 34 [. 8.1 0.058
Adeno_shaft 2/3 1252 1285 .. 1 30 [] 4.3 5.3
RtxA 43/48 1252 1267 .. 4 19 .] 7.0 0.7
Autotransporter 1/1 1265 1315 .. 240 296 .] 1.7 4.2
Big_2 1/1 1268 1288 .. 69 90 .] 4.6 1.2
RtxA 44/48 1268 1286 .. 1 19 [] 14.3 0.0045
RtxA 45/48 1287 1305 .. 1 19 [] 15.2 0.0024
RtxA 46/48 1306 1324 .. 1 19 [] 23.0 1.1e-05
Adeno_shaft 3/3 1311 1323 .. 18 30 .] 2.3 19
Hydrolase 2/2 1325 1358 .. 146 184 .] 0.2 13
RtxA 47/48 1325 1343 .. 1 19 [] 14.8 0.0033
Flp_Fap 1/1 1363 1386 .. 26 50 .] 7.6 0.5
CheC 1/1 1426 1435 .. 1 10 [. 3.1 9.7
DUF411 1/1 1445 1463 .. 1 20 [. 1.0 1.4
CBM_4_9 1/1 1471 1496 .. 1 30 [. 9.2 0.037
DUF642 1/1 1472 1482 .. 165 175 .. -0.9 7.4
Cas_TM1812 1/1 1515 1532 .. 232 249 .] 0.6 6.8
EsxB 1/1 1515 1530 .. 87 102 .] 4.0 1.1
CBM_6 1/1 1558 1599 .. 77 118 .. 4.2 0.63
DUF918 1/1 1626 1644 .. 129 150 .. 1.8 6
Spc24 1/1 1644 1671 .. 1 28 [. 3.2 3.7
Tir_receptor_C 1/1 1673 1681 .. 1 9 [. 0.7 5.2
M 1/1 1683 1703 .. 1 21 [] 5.3 4.1
OPA3 1/1 1685 1708 .. 113 136 .] 2.7 4.4
Paramyxo_P 1/1 1686 1709 .. 1 24 [. 0.7 5.8
DeoC 1/1 1716 1736 .. 271 289 .] 0.7 5.6
ThiC 1/1 1733 1740 .. 1 8 [. -0.5 8.2
CCG 1/1 1734 1755 .. 30 54 .. 3.5 4.4
CP12 1/1 1739 1756 .. 1 19 [. 2.1 5.5
BAT2_N 1/1 1774 1789 .. 185 200 .] 1.7 3
ATP-synt_B 1/1 1785 1837 .. 35 91 .. 3.9 2
TPD52 1/1 1871 1904 .. 1 37 [. 3.7 1
Phage-tail_2 1/1 1928 1950 .. 149 173 .] 1.9 6.3
LTV 1/1 2015 2033 .. 1 20 [. 3.4 0.66
CBM49 1/1 2020 2028 .. 83 91 .] 4.1 1.6
DUF23 1/1 2051 2084 .. 303 341 .] 0.9 5.7
SCO1-SenC 1/1 2101 2124 .. 165 188 .] 1.5 4.7
PilN 1/1 2167 2191 .. 152 176 .] 2.3 2.4
DUF679 1/1 2210 2218 .. 1 9 [. 0.7 6.6
zf-CHC2 1/1 2215 2229 .. 84 98 .] 3.6 2.7
H-kinase_dim 1/1 2342 2355 .. 1 14 [. 2.1 8.9
Chlor_dismutase 1/1 2358 2372 .. 1 16 [. 1.0 7.9
DUF469 1/1 2377 2381 .. 101 105 .] -0.5 8.8
CDC37_C 1/1 2415 2442 .. 84 110 .] 1.5 9
DUF842 1/1 2456 2473 .. 1 18 [. 1.4 7.8
DIRP 1/1 2534 2554 .. 87 110 .] 2.1 7.5
Ribosomal_L7Ae 1/1 2576 2592 .. 1 17 [. 3.7 2.1
Peptidase_C9 1/1 2607 2627 .. 189 209 .] 0.4 3.3
VWA_CoxE 1/1 2612 2640 .. 1 33 [. 1.7 4.6
DUF936 1/1 2619 2648 .. 767 796 .] -0.1 3.1
PKD 1/1 2727 2745 .. 72 92 .] 3.4 1.7
SecA_PP_bind 1/1 2768 2772 .. 124 128 .] 1.3 8.5
Arch_fla_DE 1/1 2888 2896 .. 103 111 .] 0.6 9.1
EspB 1/1 2943 2959 .. 305 321 .] -0.1 2.2
DUF1732 1/1 2952 2963 .. 1 12 [. 3.8 1.9
CRISPR_Cse1 1/1 2954 2986 .. 522 557 .] 0.9 4
HisKA_2 1/1 2955 2969 .. 17 36 .. 2.9 3.1
DUF2286 1/1 2966 2986 .. 17 37 .. 4.2 1.7
DUF2411 1/1 2975 2991 .. 21 37 .] 5.5 1.8
L27_1 1/1 2975 3006 .. 1 35 [. 3.2 1.2
Leuk-A4-hydro_C 1/1 3034 3043 .. 148 157 .] 1.5 4.5
TM_helix 1/1 3036 3053 .. 36 53 .] 3.6 3.7
PGAP1 1/1 3190 3207 .. 1 21 [. 2.0 3
Abhydrolase_1 1/1 3222 3332 .. 1 103 [. 21.4 1e-05
Abhydrolase_3 1/1 3245 3297 .. 50 128 .. 5.0 0.5
Gp_dh_N 1/1 3251 3267 .. 138 156 .. 0.4 1.8
OmpA 1/1 3253 3278 .. 65 90 .. 3.9 2.4
Abhydrolase_2 1/1 3258 3275 .. 103 132 .. 2.5 3
Thioesterase 1/1 3270 3297 .. 78 108 .. 2.4 2.4
DUF2159 1/1 3383 3401 .. 112 130 .] 4.4 1
DUF515 1/1 3476 3490 .. 529 543 .] 3.3 0.68
SPOR 1/1 3487 3517 .. 19 49 .. 2.0 6.1
FTP 1/1 3499 3519 .. 31 51 .] 3.5 4.1
TraH_2 1/1 3668 3675 .. 202 209 .] 2.8 0.54
Hep_Hag 1/2 3746 3759 .. 1 14 [. 3.4 9.2
RtxA 48/48 3753 3770 .. 1 19 [] 4.8 3.2
Saf-Nte_pilin 1/1 3772 3779 .. 139 146 .] 0.9 8.2
Enhancin 1/1 3806 3818 .. 1 13 [. -0.4 8.6
SecB 1/1 3834 3862 .. 1 29 [. 1.7 4.3
PYST-C1 1/1 3858 3902 .. 39 89 .] 2.2 3.6
DUF2134 1/1 3911 3951 .. 1 51 [. 3.0 2.6
GET2 1/1 3968 3974 .. 324 330 .] -0.8 9.2
DUF1417 1/1 4026 4041 .. 154 169 .. 3.4 3.1
DNA_mis_repair 1/1 4038 4061 .. 1 29 [. 4.3 1.1
Alpha_kinase 1/1 4075 4088 .. 225 238 .. -0.1 6.1
B1 1/1 4094 4131 .. 1 29 [. 0.4 9.7
VirB 1/1 4124 4133 .. 38 48 .] 1.5 10
Sigma54_DBD 1/1 4147 4166 .. 1 20 [. 1.5 7.4
Tat 1/1 4151 4170 .. 1 20 [. 2.0 9.7
XLF 1/1 4159 4189 .. 161 207 .] 3.0 2.1
HemolysinCabind 2/7 4224 4241 .. 1 18 [] 6.1 1.1
PalH 1/1 4228 4239 .. 420 431 .] 0.9 3.2
HemolysinCabind 3/7 4242 4248 .. 1 7 [. 1.8 22
HemolysinCabind 4/7 4260 4267 .. 1 8 [. 4.0 4.9
Hep_Hag 2/2 4307 4330 .. 9 28 .] 0.7 50
DUF1655 1/1 4324 4335 .. 43 55 .] 1.8 9.4
HemolysinCabind 5/7 4347 4358 .. 7 18 .] 3.7 5.8
HemolysinCabind 6/7 4366 4376 .. 8 18 .] 5.9 1.3
HemolysinCabind 7/7 4388 4405 .. 1 18 [] 2.3 16
Terminase_1 1/1 4509 4523 .. 516 530 .] 1.1 1.6
DUF2019 1/1 4520 4536 .. 89 106 .] 4.6 0.68
Alignments of top-scoring domains:
Homo_sperm_syn: domain 1 of 1, from 36 to 46: score -0.7, E = 4.7
*->dgpilmIGfGS<-*
+ i+ IGfG+
gi|1977523 36 NNNIVAIGFGG 46
HemolysinCabind: domain 1 of 7, from 67 to 79: score 4.4, E = 3.6
CS E--SSS-EEEEES
*->yGGaGnDtLyGga<-*
y G GnDt Gg+
gi|1977523 67 YTGSGNDTVVGGS 79
RtxA: domain 1 of 48, from 95 to 112: score 14.8, E = 0.0032
*->GaGgaNvitkvGdggdlaf<-*
Ga+g++ i+k+G +g+++f
gi|1977523 95 GAAGYADINKSG-DGNVSF 112
ANF_receptor: domain 1 of 1, from 109 to 132: score 0.1, E = 6.4
*->nkmvkvnfeGltGdvqfddnggrrpdysl<-*
n v+f G++G v++d g++ d s+
gi|1977523 109 N----VSFAGAAGGVSIDH-LGNHGDVSY 132
RtxA: domain 2 of 48, from 114 to 132: score 14.0, E = 0.0056
*->GaGgaNvitkvGdggdlaf<-*
Ga+g+ i++ G++gd+++
gi|1977523 114 GAAGGVSIDHLGNHGDVSY 132
RtxA: domain 3 of 48, from 134 to 152: score 18.3, E = 0.00029
*->GaGgaNvitkvGdggdlaf<-*
Ga+++N it++G +g+++f
gi|1977523 134 GAAAYNGITRKGLSGNVTF 152
RtxA: domain 4 of 48, from 154 to 172: score 17.7, E = 0.00044
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N +++ ++g+l+f
gi|1977523 154 GAGGYNALWHETNQGNLSF 172
RtxA: domain 5 of 48, from 174 to 198: score 15.5, E = 0.002
*->GaGgaNvitkv......Gdggdlaf<-*
GaG++N+++++ ++ +G++gd++f
gi|1977523 174 GAGAGNKLDRTwfnryqGSHGDVTF 198
RtxA: domain 6 of 48, from 200 to 218: score 17.5, E = 0.0005
*->GaGgaNvitkvGdggdlaf<-*
GaG+aN i ++++ g+++f
gi|1977523 200 GAGAANSISSRVETGNITF 218
RtxA: domain 7 of 48, from 220 to 238: score 17.1, E = 0.00065
*->GaGgaNvitkvGdggdlaf<-*
GaG+ N+++++G+ gd+++
gi|1977523 220 GAGADNHLVRKGKVGDITL 238
RtxA: domain 8 of 48, from 268 to 286: score 15.9, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
G Gg+N +++ +++gd++f
gi|1977523 268 GVGGYNSLYSDVAHGDIHF 286
RtxA: domain 9 of 48, from 288 to 306: score 15.2, E = 0.0025
*->GaGgaNvitkvGdggdlaf<-*
G+G++N i ++G+g+d a
gi|1977523 288 GGGAYNTIIRKGSGNDFAK 306
SOR: domain 1 of 1, from 353 to 373: score 8.1, E = 0.036
*->pkpyvAINmakvkNePktlEL<-*
y IN+++++N+P+t EL
gi|1977523 353 DSTYTKINKVQLRNDPQTGEL 373
ubiquitin: domain 1 of 1, from 411 to 432: score 2.4, E = 6.8
CS BCGGCTTTTTE EEEEEEESSS
*->tLseYniqdgs.ftlhlvlrlr<-*
tLs+++++++ ++t+h v +
gi|1977523 411 TLSDLKVEHQQsVTVHAVEKSL 432
Peptidase_M6: domain 1 of 1, from 494 to 510: score 1.1, E = 1.3
*->LKikvlgQAkdgSagav<-*
+Ki v++ A+d ++ga+
gi|1977523 494 TKIVVVELANDPETGAL 510
SURF4: domain 1 of 1, from 562 to 579: score 0.5, E = 5.7
*->neviaraEDlAENtfvrk<-*
+e a +E++++ t++++
gi|1977523 562 SETVADIEEYTDQTLFKP 579
DUF2190: domain 1 of 1, from 580 to 593: score 7.5, E = 0.12
*->AagsGaatvaVkLn<-*
A++sG+ +++V++n
gi|1977523 580 ANDSGESSGDVRFN 593
RtxA: domain 10 of 48, from 594 to 612: score 15.4, E = 0.0021
*->GaGgaNvitkvGdggdlaf<-*
GaGg+Nvi + +++g+++f
gi|1977523 594 GAGGGNVIKSNVTRGNVHF 612
Fimbrial: domain 1 of 1, from 608 to 614: score 0.5, E = 9.6
*->GtvtFkG<-*
G+v+F+G
gi|1977523 608 GNVHFNG 614
RtxA: domain 11 of 48, from 614 to 632: score 16.9, E = 0.00075
*->GaGgaNvitkvGdggdlaf<-*
G+G aNvi ++++ g+++f
gi|1977523 614 GGGIANVILHSSQFGNTEF 632
RtxA: domain 12 of 48, from 634 to 652: score 25.1, E = 2.7e-06
*->GaGgaNvitkvGdggdlaf<-*
G+G+aNvi+k+G++gdl+f
gi|1977523 634 GGGAANVIVKSGEEGDLTF 652
RtxA: domain 13 of 48, from 654 to 672: score 16.0, E = 0.0014
*->GaGgaNvitkvGdggdlaf<-*
GaG aNv+++ +++g +++
gi|1977523 654 GAGLANVLVHQSQQGKMDV 672
Ring_hydroxyl_B: domain 1 of 1, from 658 to 687: score 4.5, E = 0.7
CS EEEEEEEEETT.TEEEEEEEEEEEEEEE-SST
*->SnflvyRnRlevrtvdvfaGereDvLRrsgdg<-*
+n+lv+ ++ + + dv+aG++ vL r gdg
gi|1977523 658 ANVLVHQSQQG--KMDVYAGGAVNVLVRLGDG 687
RtxA: domain 14 of 48, from 674 to 692: score 14.0, E = 0.0055
*->GaGgaNvitkvGdggdlaf<-*
++G+ Nv+++ Gdg++la+
gi|1977523 674 AGGAVNVLVRLGDGQYLAH 692
YiaAB: domain 1 of 1, from 693 to 707: score 1.9, E = 9
*->lltfsavtlqKytrD<-*
ll+++++ +qK ++D
gi|1977523 693 LLAYGNISVQKGSGD 707
RtxA: domain 15 of 48, from 712 to 730: score 6.9, E = 0.75
*->GaGgaNvitkvGdggdlaf<-*
++Gg+N t++G+g+ l +
gi|1977523 712 MLGGYNTHTQIGSGNGLWL 730
RtxA: domain 16 of 48, from 731 to 748: score 19.6, E = 0.00012
*->GaGgaNvitkvGdggdlaf<-*
+aGg Nv+t+vG +gd+a+
gi|1977523 731 AAGGFNVMTQVG-QGDVAA 748
RtxA: domain 17 of 48, from 751 to 767: score 13.9, E = 0.0059
*->aGgaNvitkvGdggdlaf<-*
aGgaNv+tk+G +g+l+
gi|1977523 751 AGGANVLTKMG-EGELTS 767
RtxA: domain 18 of 48, from 769 to 787: score 15.7, E = 0.0017
*->GaGgaNvitkvGdggdlaf<-*
++GgaNvit+++ +++++
gi|1977523 769 MLGGANVITHISGDNETSN 787
RtxA: domain 19 of 48, from 792 to 810: score 19.8, E = 0.0001
*->GaGgaNvitkvGdggdlaf<-*
++GgaN++tk+G+g++la
gi|1977523 792 ALGGANILTKKGKGNTLAM 810
DUF1786: domain 1 of 1, from 811 to 817: score -1.0, E = 8.8
*->MGGGPvT<-*
MGGG+++
gi|1977523 811 MGGGANV 817
RtxA: domain 20 of 48, from 811 to 829: score 21.0, E = 4.6e-05
*->GaGgaNvitkvGdggdlaf<-*
++GgaNv+t+vGdg ++ +
gi|1977523 811 MGGGANVLTHVGDGTTTGV 829
RtxA: domain 21 of 48, from 830 to 847: score 16.9, E = 0.00078
*->GaGgaNvitkvGdggdlaf<-*
+ GgaN++tkvG +gd++
gi|1977523 830 MVGGANILTKVG-NGDTTG 847
Sec_GG: domain 1 of 1, from 831 to 846: score 3.8, E = 3.2
*->kGGtrillkvdksvtq<-*
+GG++il+kv + +t+
gi|1977523 831 VGGANILTKVGNGDTT 846
PCMT: domain 1 of 2, from 849 to 862: score 0.7, E = 7.2
CS HHHTTSEEEEES-G
*->lLksGnVivvvGDG<-*
+L GnV+++vGDG
gi|1977523 849 MLGVGNVLTHVGDG 862
RtxA: domain 22 of 48, from 849 to 867: score 20.8, E = 5.4e-05
*->GaGgaNvitkvGdggdlaf<-*
++G++Nv+t+vGdg++l +
gi|1977523 849 MLGVGNVLTHVGDGQTLGV 867
RtxA: domain 23 of 48, from 868 to 886: score 17.1, E = 0.00068
*->GaGgaNvitkvGdggdlaf<-*
+++++N+ tkvGdg ++a+
gi|1977523 868 MGAAGNIFTKVGDGTSIAV 886
Spore_III_AE: domain 1 of 1, from 883 to 894: score 4.8, E = 0.56
*->aItIivgaGNit<-*
+I++++gaGNi
gi|1977523 883 SIAVMIGAGNIF 894
RtxA: domain 24 of 48, from 887 to 905: score 17.4, E = 0.00052
*->GaGgaNvitkvGdggdlaf<-*
++G++N+ t+vG+g+ a+
gi|1977523 887 MIGAGNIFTHVGEGNAWAL 905
RtxA: domain 25 of 48, from 906 to 924: score 15.2, E = 0.0024
*->GaGgaNvitkvGdggdlaf<-*
++G +Nv tkvG+g la+
gi|1977523 906 MGGLGNVFTKVGNGDALAL 924
RPAP1_C: domain 1 of 1, from 909 to 920: score 1.9, E = 7.5
*->LgrILyklgkge<-*
Lg+++ k+g+g+
gi|1977523 909 LGNVFTKVGNGD 920
DUF1623: domain 1 of 1, from 916 to 933: score 2.2, E = 4.3
*->CPcNGDCLAVvvssdnitt<-*
+ +NGD LA+ v ++n++t
gi|1977523 916 V-GNGDALALMVAEANVFT 933
Herpes_MCP: domain 1 of 1, from 923 to 935: score -2.6, E = 9.4
CS XXXXXXXXXXXXX
*->PylapsgnLLsqI<-*
+ +++++n++++I
gi|1977523 923 ALMVAEANVFTHI 935
RtxA: domain 26 of 48, from 925 to 943: score 16.4, E = 0.0011
*->GaGgaNvitkvGdggdlaf<-*
+ ++aNv t++Gdg ++a+
gi|1977523 925 MVAEANVFTHIGDGMSVAL 943
Hydrolase: domain 1 of 2, from 934 to 958: score 3.7, E = 1.2
CS EEESSCHHHHHHHHCTEEEEEESSH
*->mVGDgvnDapalaaAGvgvamgngg<-*
++GDg a +la+ +v++ gng+
gi|1977523 934 HIGDGMSVALMLAKGNVATKVGNGT 958
RtxA: domain 27 of 48, from 944 to 962: score 15.2, E = 0.0025
*->GaGgaNvitkvGdggdlaf<-*
+++++Nv tkvG+g +la+
gi|1977523 944 MLAKGNVATKVGNGTTLAA 962
RtxA: domain 28 of 48, from 963 to 981: score 14.8, E = 0.0033
*->GaGgaNvitkvGdggdlaf<-*
+ G aN+ t++G+g + a+
gi|1977523 963 MVGNANIFTHIGHGSTFAA 981
RtxA: domain 29 of 48, from 982 to 1000: score 18.3, E = 0.00029
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++tkvG++ + a+
gi|1977523 982 MIGQANIMTKVGNDLTAAL 1000
RtxA: domain 30 of 48, from 1001 to 1019: score 21.4, E = 3.5e-05
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN++t+vGdg +l +
gi|1977523 1001 MVGKANIMTHVGDGTSLGL 1019
Phge_rel_HI1409: domain 1 of 1, from 1002 to 1016: score 1.2, E = 9.3
*->DglqnflaglGtgrd<-*
g +n+++ +G+g++
gi|1977523 1002 VGKANIMTHVGDGTS 1016
RtxA: domain 31 of 48, from 1021 to 1038: score 13.1, E = 0.01
*->aGgaNvitkvGdggdlaf<-*
aG+ Nv+tkvG+g +la+
gi|1977523 1021 AGEVNVMTKVGNGTTLAA 1038
RtxA: domain 32 of 48, from 1039 to 1056: score 16.0, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN++t+vG +g + +
gi|1977523 1039 MFGKANIMTHVG-DGLTGV 1056
DegV: domain 1 of 1, from 1045 to 1061: score 3.6, E = 1.2
CS HHHHH-TT-EEEEEEEE
*->IgtHtGpGalgvaiipk<-*
I tH+G G gv+++++
gi|1977523 1045 IMTHVGDGLTGVLALGE 1061
RtxA: domain 33 of 48, from 1058 to 1075: score 12.7, E = 0.014
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++tkvG + + +
gi|1977523 1058 ALGEANIVTKVG-DDFMGV 1075
Antimicrobial_8: domain 1 of 1, from 1068 to 1084: score 4.0, E = 5.7
*->GVgdlirKivsaiK.NVv<-*
Vgd + +v+a K NVv
gi|1977523 1068 -VGDDFMGVVAAAKaNVV 1084
RtxA: domain 34 of 48, from 1077 to 1095: score 17.1, E = 0.00066
*->GaGgaNvitkvGdggdlaf<-*
+a++aNv+t+vGd + a+
gi|1977523 1077 AAAKANVVTHVGDATTAAV 1095
RtxA: domain 35 of 48, from 1097 to 1114: score 14.9, E = 0.0031
*->aGgaNvitkvGdggdlaf<-*
aG++N++tkvG+g ++ +
gi|1977523 1097 AGKGNILTKVGEGTTVGL 1114
PCMT: domain 2 of 2, from 1120 to 1130: score 0.0, E = 11
CS TSEEEEES-GG
*->GnVivvvGDGr<-*
GnV ++vGDG+
gi|1977523 1120 GNVMTHVGDGT 1130
RtxA: domain 36 of 48, from 1120 to 1134: score 7.7, E = 0.43
*->aNvitkvGdggdlaf<-*
+Nv+t+vGdg ++
gi|1977523 1120 GNVMTHVGDGTTIGI 1134
RtxA: domain 37 of 48, from 1135 to 1153: score 17.9, E = 0.00039
*->GaGgaNvitkvGdggdlaf<-*
++G+aN itkvGdg +++
gi|1977523 1135 AKGKANLITKVGDGLGVNV 1153
Adeno_shaft: domain 1 of 3, from 1140 to 1152: score 4.9, E = 3.6
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
+L +k+G+gL+v+
gi|1977523 1140 NLITKVGDGLGVN 1152
RtxA: domain 38 of 48, from 1154 to 1172: score 16.7, E = 0.00085
*->GaGgaNvitkvGdggdlaf<-*
++G+aNv t+vGdg +f
gi|1977523 1154 AWGQANVFTQVGDGDRYNF 1172
RtxA: domain 39 of 48, from 1173 to 1191: score 20.2, E = 7.9e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aN itkvGdg+++++
gi|1977523 1173 AKGEANLITKVGDGQEVSV 1191
RtxA: domain 40 of 48, from 1194 to 1210: score 11.9, E = 0.023
*->GgaNvitkvGdggdlaf<-*
G+aN+it+vG+g d +
gi|1977523 1194 GEANIITHVGNGDDYTG 1210
Glyco_hydro_16: domain 1 of 2, from 1204 to 1229: score 5.2, E = 0.39
CS SBTTBTTEE-GGGEEEE...TT...SEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtL<-*
+g+d++ wg+ nv + +G++++L
gi|1977523 1204 NGDDYTGAWGKANVITK---VG-NGRNVVL 1229
RtxA: domain 41 of 48, from 1211 to 1229: score 21.2, E = 4e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aNvitkvG+g ++ +
gi|1977523 1211 AWGKANVITKVGNGRNVVL 1229
Ins_P5_2-kin: domain 1 of 1, from 1228 to 1237: score -1.3, E = 9.8
*->YlaEGgANiV<-*
la+G ANiV
gi|1977523 1228 VLAKGEANIV 1237
RtxA: domain 42 of 48, from 1230 to 1248: score 15.3, E = 0.0023
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++t+vG+g + ++
gi|1977523 1230 AKGEANIVTQVGNGDSFNA 1248
Glyco_hydro_16: domain 2 of 2, from 1242 to 1269: score 8.1, E = 0.058
CS SBTTBTTEE-GGGEEEE...TT...SEEEEEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtLtldk<-*
+g+ f+++w++gn++ + +g++ t++k
gi|1977523 1242 NGDSFNALWSKGNIVTK---VG---DGMQVTAAK 1269
Adeno_shaft: domain 2 of 3, from 1252 to 1285: score 4.3, E = 5.3
CS S--EEE-B-TTEEE-TS- EEE-B-TTEEEE
*->nnsLtlntgpGLtvtnna....LalklGagLtvd<-*
+++ ++g+G++vt +++ ++++ +G+gL+v+
gi|1977523 1252 KGNIVTKVGDGMQVTAAKgqanITTTVGNGLSVT 1285
RtxA: domain 43 of 48, from 1252 to 1267: score 7.0, E = 0.7
*->gaNvitkvGdggdlaf<-*
++N++tkvGdg +++
gi|1977523 1252 KGNIVTKVGDGMQVTA 1267
Autotransporter: domain 1 of 1, from 1265 to 1315: score 1.7, E = 4.2
CS ---- ---- --.---------EEEEEEEEEEEEECTTEEEEEEEEE
*->vnsa.llaa.gslfgvasgtpldrtalslgaGlelklgsnlslflny
v++a+++a+ ++++g+ l+ ta+ a+ ++k+g+++s+++ +
gi|1977523 1265 VTAAkGQANiTTTVGNG----LSVTAAYGDANINTKVGDGVSVNVAW 1307
CS E....TTEEEEE
saefgsqlsdng<-*
+ ++ +++
gi|1977523 1308 G----KYNINTK 1315
Big_2: domain 1 of 1, from 1268 to 1288: score 4.6, E = 1.2
CS SSS-EEEEEEETT.TEEEEEEE
*->akGtatItatsgdgnksasvtv<-*
akG+a+It t+g+ + s+++
gi|1977523 1268 AKGQANITTTVGN-GLSVTAAY 1288
RtxA: domain 44 of 48, from 1268 to 1286: score 14.3, E = 0.0045
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+ t vG+g ++++
gi|1977523 1268 AKGQANITTTVGNGLSVTA 1286
RtxA: domain 45 of 48, from 1287 to 1305: score 15.2, E = 0.0024
*->GaGgaNvitkvGdggdlaf<-*
+ G aN+ tkvGdg ++++
gi|1977523 1287 AYGDANINTKVGDGVSVNV 1305
RtxA: domain 46 of 48, from 1306 to 1324: score 23.0, E = 1.1e-05
*->GaGgaNvitkvGdggdlaf<-*
++G++N+ tkvGdg ++a+
gi|1977523 1306 AWGKYNINTKVGDGLNVAV 1324
Adeno_shaft: domain 3 of 3, from 1311 to 1323: score 2.3, E = 19
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
++++k+G+gL+v
gi|1977523 1311 NINTKVGDGLNVA 1323
Hydrolase: domain 2 of 2, from 1325 to 1358: score 0.2, E = 13
CS HTSSGGGE.....EEEESSCHHHHHHHHCTEEEEEESSH
*->lgvkpeevakpevlmVGDgvnDapalaaAGvgvamgngg<-*
+++k + ++VGDg+n ++ a+ +v++ gng
gi|1977523 1325 MKGKANAN-----IHVGDGLNINASYAQNNVAIKVGNGD 1358
RtxA: domain 47 of 48, from 1325 to 1343: score 14.8, E = 0.0033
*->GaGgaNvitkvGdggdlaf<-*
++G+aN +vGdg ++++
gi|1977523 1325 MKGKANANIHVGDGLNINA 1343
Flp_Fap: domain 1 of 1, from 1363 to 1386: score 7.6, E = 0.5
*->AVayvttlgitaLktkFtkigtalt<-*
AVa ++t++ ++L+++F +i ++
gi|1977523 1363 AVASSNTSS-NKLSALFDNIKQTVL 1386
CheC: domain 1 of 1, from 1426 to 1435: score 3.1, E = 9.7
CS HHHHHHHHHH
*->mekSAlgEig<-*
++++A++E+g
gi|1977523 1426 FQMDAIKEVG 1435
DUF411: domain 1 of 1, from 1445 to 1463: score 1.0, E = 1.4
*->eVtvhdtdqDlaavKqrlGv<-*
+Vt +dt Dl+ +l v
gi|1977523 1445 SVTKVDTP-DLNKMQHALNV 1463
CBM_4_9: domain 1 of 1, from 1471 to 1496: score 9.2, E = 0.037
*->gnlikngtFEdpgglsgWkarggstvkatv<-*
nli+ng+FE g gW+ + g v+a++
gi|1977523 1471 PNLIVNGDFEQ--GAHGWQSTHG--VEASY 1496
DUF642: domain 1 of 1, from 1472 to 1482: score -0.9, E = 7.4
*->NllkNGgFEeG<-*
Nl+ NG+FE G
gi|1977523 1472 NLIVNGDFEQG 1482
Cas_TM1812: domain 1 of 1, from 1515 to 1532: score 0.6, E = 6.8
*->vdrFlntGdarplasLlk<-*
+d+++nt ++ la+L++
gi|1977523 1515 LDTYTNTSLYQDLANLAQ 1532
EsxB: domain 1 of 1, from 1515 to 1530: score 4.0, E = 1.1
*->iqkFdnlSevkeiKrL<-*
+++++n+S +++ +L
gi|1977523 1515 LDTYTNTSLYQDLANL 1530
CBM_6: domain 1 of 1, from 1558 to 1599: score 4.2, E = 0.63
CS EEEEEEE---SSTTEEEEEEEEEEEESEEEEEEEEEES-TTS
*->lvGtvsVpsTGgWqtwqtvtanVtlptGvhdlyLvftggagg<-*
+ G v + s G+ + wq +t ++t+++G + + ++ tg+++g
gi|1977523 1558 WNGEVVFSSSGDESAWQQKTLKLTAQAGSNRIEFKGTGHNDG 1599
DUF918: domain 1 of 1, from 1626 to 1644: score 1.8, E = 6
*->dqpgdtpayvepddkeRnelDR<-*
++p +a++ ++dkeR+e DR
gi|1977523 1626 QNP---AAQNALSDKERAEADR 1644
Spc24: domain 1 of 1, from 1644 to 1671: score 3.2, E = 3.7
*->ileldnekfrlakelndLEseinsLqse<-*
+++l++ek++ ++++ +s+++s++ +
gi|1977523 1644 RHRLEQEKQKQLDAVAGSQSQLESTNQQ 1671
Tir_receptor_C: domain 1 of 1, from 1673 to 1681: score 0.7, E = 5.2
*->iEsNAQAQq<-*
E+N QAQ+
gi|1977523 1673 LENNGQAQR 1681
M: domain 1 of 1, from 1683 to 1703: score 5.3, E = 4.1
*->eaKKeLEaelqeLeeelqkLe<-*
+ ++e Ea +eL+ q L+
gi|1977523 1683 AVQEESEAITAELTKLAQGLD 1703
OPA3: domain 1 of 1, from 1685 to 1708: score 2.7, E = 4.4
*->qqeleeLrlkveeLekeleelkaq<-*
q e e+ + ++++L+ l+ l++q
gi|1977523 1685 QEESEAITAELTKLAQGLDVLDSQ 1708
Paramyxo_P: domain 1 of 1, from 1686 to 1709: score 0.7, E = 5.8
*->eestrsveematLLqsLGVIqSaa<-*
ees + e +L q L V S+a
gi|1977523 1686 EESEAITAELTKLAQGLDVLDSQA 1709
DeoC: domain 1 of 1, from 1716 to 1736: score 0.7, E = 5.6
CS . TS STB.EEESCHHHHHHH
*->G.dW.dryRiGvsaGRaiwqg<-*
G+ W++ + +G++aG+++ +
gi|1977523 1716 GdQWrNEFASGLLAGVQTQLD 1736
ThiC: domain 1 of 1, from 1733 to 1740: score -0.5, E = 8.2
*->TQMeeArk<-*
TQ+++A++
gi|1977523 1733 TQLDDAKQ 1740
CCG: domain 1 of 1, from 1734 to 1755: score 3.5, E = 4.4
*->qknpeiaealakrnveaaeeetgad<-*
q + a++la +++++a+ +t ad
gi|1977523 1734 Q--LDDAKQLANEKIAEAK-QTHAD 1755
CP12: domain 1 of 1, from 1739 to 1756: score 2.1, E = 5.5
*->lselieesiaeArqvCadd<-*
+l e iaeA+q+ ad+
gi|1977523 1739 -KQLANEKIAEAKQTHADN 1756
BAT2_N: domain 1 of 1, from 1774 to 1789: score 1.7, E = 3
*->Gdqdksgkekdatdes<-*
G+q ++g e d++d+
gi|1977523 1774 GEQNRAGAEHDIADAQ 1789
ATP-synt_B: domain 1 of 1, from 1785 to 1837: score 3.9, E = 2
*->IannikeAEerlkqaaallaeaeqqLaqAraeAseIinnAkkeaqkl
Ia++ ++AE+r+++a a + a+q A+ +A+ +nnA++++ +
gi|1977523 1785 IADAQADAEKRKADALAKGKDAQQ----AESDAHHAVNNAQSRGDRD 1827
keeilaeAqk<-*
++ ++++A++
gi|1977523 1828 VQVAENKANQ 1837
TPD52: domain 1 of 1, from 1871 to 1904: score 3.7, E = 1
*->dedgLlvtdplvEtkedtnesssatkevLSEaEkeEL<-*
g +td+ v t+ tn++ ++ e L+E E+e L
gi|1977523 1871 --EGAGETDSHVNTDSQTNADGRFS-EGLTEQEQEAL 1904
Phage-tail_2: domain 1 of 1, from 1928 to 1950: score 1.9, E = 6.3
CS EEEEEEEEE-SS----S-----B-S
*->SiThLYMftNsekleeeePvKVKnE<-*
S+T+++ tNs+ + P KV E
gi|1977523 1928 SMTSMFSETNSKSIVV--PTKVSPE 1950
LTV: domain 1 of 1, from 2015 to 2033: score 3.4, E = 0.66
*->eKKkAqsFhLVHRsQrDPla<-*
K+ Aq+F VH sQ Pl+
gi|1977523 2015 -KNSAQTFGYVHDSQGNPLF 2033
CBM49: domain 1 of 1, from 2020 to 2028: score 4.1, E = 1.6
*->sFGYIhksq<-*
+FGY+h sq
gi|1977523 2020 TFGYVHDSQ 2028
DUF23: domain 1 of 1, from 2051 to 2084: score 0.9, E = 5.7
*->edlermrnsqkitklalelpkedfyspiifkcynesfyl<-*
+d++ ++n+q ++ el +++s+i ++ es++
gi|1977523 2051 NDIQGVNNWQ---THTIELV--TYPSEISDTAAIESRKE 2084
SCO1-SenC: domain 1 of 1, from 2101 to 2124: score 1.5, E = 4.7
CS TT--EEEEE-TTSEEEEEE..ESS
*->dHSsffYLIdpdGkilkhYgrnld<-*
+H+s+ L++ dG++ + + ++
gi|1977523 2101 NHQSLPHLVSDDGRFTLVISNSKH 2124
PilN: domain 1 of 1, from 2167 to 2191: score 2.3, E = 2.4
*->lrnLeaSklltapelssvlakaqgk<-*
+r Le+ ++++a + ++la+a++
gi|1977523 2167 VRLLESAPWYQAGLRDEFLANAKNT 2191
DUF679: domain 1 of 1, from 2210 to 2218: score 0.7, E = 6.6
*->LsstAnLak<-*
+s tA+Lak
gi|1977523 2210 YSKTADLAK 2218
zf-CHC2: domain 1 of 1, from 2215 to 2229: score 3.6, E = 2.7
*->kLAdragielpyekg<-*
+LA+++gi ++++++
gi|1977523 2215 DLAKEYGIYINDWDP 2229
H-kinase_dim: domain 1 of 1, from 2342 to 2355: score 2.1, E = 8.9
CS --EEEEEHHHHHHH
*->sqtIRVdverLDrL<-*
t++Vdv+ LD++
gi|1977523 2342 ASTVKVDVKALDHF 2355
Chlor_dismutase: domain 1 of 1, from 2358 to 2372: score 1.0, E = 7.9
*->eeReaiidEfsefvle<-*
+ R+aii+E++++ ++
gi|1977523 2358 ASRKAIITEVNAL-VS 2372
DUF469: domain 1 of 1, from 2377 to 2381: score -0.5, E = 8.8
*->vDaWy<-*
+DaWy
gi|1977523 2377 FDAWY 2381
CDC37_C: domain 1 of 1, from 2415 to 2442: score 1.5, E = 9
*->kkfkEleaey.dneeeaekeeeeeedge<-*
++++ + a+y+dn+e ++++ +d+e
gi|1977523 2415 EQWAKITAPYtDNHETLTSTKLASNDKE 2442
DUF842: domain 1 of 1, from 2456 to 2473: score 1.4, E = 7.8
*->erkqervqsavdsmlddl<-*
+++qe v s + +ml+d+
gi|1977523 2456 NKQQENVASIINTMLNDM 2473
DIRP: domain 1 of 1, from 2534 to 2554: score 2.1, E = 7.5
*->lkdLPkklPlPLavgtrVtArlrg<-*
++++P++l l v+++V++ + g
gi|1977523 2534 FEQMPDELFL---VDNKVISHHEG 2554
Ribosomal_L7Ae: domain 1 of 1, from 2576 to 2592: score 3.7, E = 2.1
CS HHHHHHHHHHHHHSEEE
*->daveellkkAlkagklv<-*
++v+ell +A+++gk++
gi|1977523 2576 MSVSELLDAAHVTGKIR 2592
Peptidase_C9: domain 1 of 1, from 2607 to 2627: score 0.4, E = 3.3
*->HsLVaehkekrgarveklvnk<-*
H+ +eh +++ vekl+n
gi|1977523 2607 HASITEHADYEPESVEKLLNL 2627
VWA_CoxE: domain 1 of 1, from 2612 to 2640: score 1.7, E = 4.6
*->arrdfaqlsaeelrrLaralaaLrRklllrlar<-*
++d+++ s+e l L+++++ + l++++
gi|1977523 2612 EHADYEPESVEKLLNLRKKIEG----YVLGHPD 2640
DUF936: domain 1 of 1, from 2619 to 2648: score -0.1, E = 3.1
*->etkEkiErLrkKIYgfLLtHVesaasales<-*
e++Ek +LrkKI g++L+H +s + +
gi|1977523 2619 ESVEKLLNLRKKIEGYVLGHPDSGRVEAMN 2648
PKD: domain 1 of 1, from 2727 to 2745: score 3.4, E = 1.7
CS EEEEEEETTCEEEEEEEEEEE
*->VtLtvsngvgsasattttvtV<-*
V+Ltvsn++g ++a t+
gi|1977523 2727 VKLTVSNEYGQTVA--DTIFA 2745
SecA_PP_bind: domain 1 of 1, from 2768 to 2772: score 1.3, E = 8.5
CS HHHHH
*->HQAIE<-*
HQAIE
gi|1977523 2768 HQAIE 2772
Arch_fla_DE: domain 1 of 1, from 2888 to 2896: score 0.6, E = 9.1
*->YIErLaGrk<-*
+IE+L++ k
gi|1977523 2888 FIEKLNAAK 2896
EspB: domain 1 of 1, from 2943 to 2959: score -0.1, E = 2.2
*->DLldlqnRmGqsaRLAG<-*
D++d+ nR q RL
gi|1977523 2943 DMMDVANRFAQELRLQA 2959
DUF1732: domain 1 of 1, from 2952 to 2963: score 3.8, E = 1.9
*->aQEvalfAdKaD<-*
aQE+ l A+++D
gi|1977523 2952 AQELRLQAQRSD 2963
CRISPR_Cse1: domain 1 of 1, from 2954 to 2986: score 0.9, E = 4
*->d.qddggqpddppearaaWqqtArkalrrlAlrlFda<-*
+ ++ + ddp+ + + ++++r+ A+r++++
gi|1977523 2954 ElRLQAQRSDDPELLEKRI----GNVVRQFAERALEE 2986
HisKA_2: domain 1 of 1, from 2955 to 2969: score 2.9, E = 3.1
*->LrLQarkfkdeevikdEVle<-*
LrLQa++++d+e le
gi|1977523 2955 LRLQAQRSDDPEL-----LE 2969
DUF2286: domain 1 of 1, from 2966 to 2986: score 4.2, E = 1.7
*->dvvEGdlekVlrdvAarALeE<-*
+++E ++++V+r A+rALeE
gi|1977523 2966 ELLEKRIGNVVRQFAERALEE 2986
DUF2411: domain 1 of 1, from 2975 to 2991: score 5.5, E = 1.8
*->lVrehardvLeeLealt<-*
+Vr+ a+ +Lee+e +
gi|1977523 2975 VVRQFAERALEEIETFK 2991
L27_1: domain 1 of 1, from 2975 to 3006: score 3.2, E = 1.2
*->MPvkkqdtqRALqlLEeyqskLSqt.gDraLRssiE<-*
v +q ++RAL+ +E ++ Sq+++ r +R E
gi|1977523 2975 --VVRQFAERALEEIETFKA--SQAdQGRVFRINLE 3006
Leuk-A4-hydro_C: domain 1 of 1, from 3034 to 3043: score 1.5, E = 4.5
*->icramVeKdL<-*
+c+++V+K+L
gi|1977523 3034 NCSSTVAKVL 3043
TM_helix: domain 1 of 1, from 3036 to 3053: score 3.6, E = 3.7
*->sdlvaklLkklgldslva<-*
s+ vak+Lk+ g d l++
gi|1977523 3036 SSTVAKVLKAGGADKLIG 3053
PGAP1: domain 1 of 1, from 3190 to 3207: score 2.0, E = 3
*->elsGiPVLFIPGldfNaGSyk<-*
sG +VLF++G ++ S +
gi|1977523 3190 TTSGKVVLFLHG---SGSSAE 3207
Abhydrolase_1: domain 1 of 1, from 3222 to 3332: score 21.4, E = 1e-05
CS CEEEEECTTTSTTSSEE..GGCCGGGSHHHHHHHHHHHHHHHCTSSE
*->fdvialDlrGfGqSsrpkrgapdladyrfddlaedlealldalgldk
d +a++lrG+G+S+ + + + + d+ ++++l+ g+d
gi|1977523 3222 IDMLAVNLRGYGESD-G----GPSEKGLYQDARTMFNYLVNDKGIDP 3263
CS E EEEEEETHHHHHH HHHHHHCGGTCEEEEEEESSS HH
p.vnlvGhSmGGlia...layaakypelrvkalvlvgtv.........lp
++++ G+SmGG ia + ++yaa+ ++ v++l l+ ++++ ++ + ++
gi|1977523 3264 SnIIIHGYSMGGPIAadlARYAAQNGQ-AVSGLLLDRPMpsmtkaitaHE 3312
CS HCHCSTCHHHH HHHHHHHH
aglssplvprl.gnleglla<-*
++ ++ +v ++ + +g+++
gi|1977523 3313 VANPAGIVGAIaKAVNGQFS 3332
Abhydrolase_3: domain 1 of 1, from 3245 to 3297: score 5.0, E = 0.5
CS HHHHHHHHHHHHHTH.........H.HHTEEEEEEEEEEETHHHHHH
*->idDayaAlrWlaehavgsggeddpwlelgaDpsriavaGDSAGGNLA
+ Da + + +l+ g+Dps+i + G S GG +A
gi|1977523 3245 YQDARTMFNYLVNDK-------------GIDPSNIIIHGYSMGGPIA 3278
CS HHHH.HHHHHCTSS-...........EEEEEE
aavAqlrardrGgplaeldpdlspvrpagqvL<-*
a +A a + +g++ ++g++L
gi|1977523 3279 ADLA-RYAAQ-NGQA-----------VSGLLL 3297
Gp_dh_N: domain 1 of 1, from 3251 to 3267: score 0.4, E = 1.8
CS EETTTSGGGGGTTTTSEEE
*->TfVyGVNhddYdpekhkiV<-*
+f+y VN+ +dp+ +i+
gi|1977523 3251 MFNYLVNDKGIDPS--NII 3267
OmpA: domain 1 of 1, from 3253 to 3278: score 3.9, E = 2.4
*->dyLvskgGvpadrisavGyGeskPva<-*
+yLv+ G+++++i Gy + P+a
gi|1977523 3253 NYLVNDKGIDPSNIIIHGYSMGGPIA 3278
Abhydrolase_2: domain 1 of 1, from 3258 to 3275: score 2.5, E = 3
*->ktGkeALEeLIleLeIpssrIiiGGFSQGg<-*
++G I++s+Iii G S+Gg
gi|1977523 3258 DKG------------IDPSNIIIHGYSMGG 3275
Thioesterase: domain 1 of 1, from 3270 to 3297: score 2.4, E = 2.4
CS EETTHHHHHHHHHHHHHHT---T--CEEEEE
*->GhSmGGllAfEvArrLerrqdgGeepagLil<-*
G+SmGG +A +Ar ++ G +++gL l
gi|1977523 3270 GYSMGGPIAADLARYAAQN---GQAVSGLLL 3297
DUF2159: domain 1 of 1, from 3383 to 3401: score 4.4, E = 1
*->DAeeRaAreLAdqIvtrLa<-*
+A +R++++ AdqIv L
gi|1977523 3383 EASNRLMSQYADQIVSGLS 3401
DUF515: domain 1 of 1, from 3476 to 3490: score 3.3, E = 0.68
*->ilqnknsiilavvtq<-*
i+q +n +++a++++
gi|1977523 3476 IVQMENDDVVAKAAA 3490
SPOR: domain 1 of 1, from 3487 to 3517: score 2.0, E = 6.1
CS HHHHHHHTTT--...EEEEEETTEEEEEESS
*->alaakLrakGfaayvavvsgggtlYRVrvGp<-*
++aa+L++k++++ v+v ++ YRV++G+
gi|1977523 3487 KAAANLAGKHPESSVVVQLDSDGNYRVVYGD 3517
FTP: domain 1 of 1, from 3499 to 3519: score 3.5, E = 4.1
*->geliVhvskdGkvksvsGdfs<-*
++++V +++dG + v+Gd s
gi|1977523 3499 SSVVVQLDSDGNYRVVYGDPS 3519
TraH_2: domain 1 of 1, from 3668 to 3675: score 2.8, E = 0.54
*->IDLSgIGa<-*
IDLS+IG
gi|1977523 3668 IDLSRIGV 3675
Hep_Hag: domain 1 of 2, from 3746 to 3759: score 3.4, E = 9.2
CS ECSTT-EEESTT-E
*->AtganStAiGsnak<-*
+ g++S+A+G+n++
gi|1977523 3746 TGGFKSLAFGDNNV 3759
RtxA: domain 48 of 48, from 3753 to 3770: score 4.8, E = 3.2
*->GaGgaNvitkvGdggdlaf<-*
+ G Nv++++G +g++ +
gi|1977523 3753 AFGDNNVMVHIG-DGESKY 3770
Saf-Nte_pilin: domain 1 of 1, from 3772 to 3779: score 0.9, E = 8.2
*->ldvvaYQa<-*
+d+ +YQa
gi|1977523 3772 VDIGGYQA 3779
Enhancin: domain 1 of 1, from 3806 to 3818: score -0.4, E = 8.6
*->msktleipvlplP<-*
m k++++p+l +P
gi|1977523 3806 MDKSIPTPPLVNP 3818
SecB: domain 1 of 1, from 3834 to 3862: score 1.7, E = 4.3
CS ------------SS--EEEEEEEEEEEEE
*->MseqnkDvsateEaepalqiqriYvKDis<-*
Ms D a+ E++ +l+ +vKD s
gi|1977523 3834 MSGEGEDWLAAQEQQWTLSGAKKFVKDMS 3862
PYST-C1: domain 1 of 1, from 3858 to 3902: score 2.2, E = 3.6
*->iKkinrsnekndIesKrEtqLnNnNnkdikddkdDkdFncFninkdd
+K +++ + +++ + + qLn +N +d + k D + +
gi|1977523 3858 VKDMSGLDQSSSVDYTHLVQLNSQNERDSRGLKHDAE------TTLN 3898
kknk<-*
k++
gi|1977523 3899 KQYN 3902
DUF2134: domain 1 of 1, from 3911 to 3951: score 3.0, E = 2.6
*->AAAqrlsdgsaaaanssaaaaaaAaaaaarngf..gggdlalslsve
++ +ls+++ + +A++ +a n + +g+g+ +++v+
gi|1977523 3911 SGTSQLSRADK---------LRQANEKLAFNFAvgGQGA---DIQVT 3945
cGywna<-*
+G+wn+
gi|1977523 3946 TGNWNF 3951
GET2: domain 1 of 1, from 3968 to 3974: score -0.8, E = 9.2
*->lfGLlsy<-*
lfGL+++
gi|1977523 3968 LFGLMTQ 3974
DUF1417: domain 1 of 1, from 4026 to 4041: score 3.4, E = 3.1
*->gvviDedGeivpGvev<-*
g++i+ +G++v+Gv +
gi|1977523 4026 GQIISRNGQAVDGVAI 4041
DNA_mis_repair: domain 1 of 1, from 4038 to 4061: score 4.3, E = 1.1
CS HHHHHCCE..EEEEEEET...TCCCCCCC
*->GdavaknllPlpiekedgraidfkisgfl<-*
G a++k++ l++ e++ ++++++f+
gi|1977523 4038 GVAILKEM--LEVIGEFS---GDQLQAFV 4061
Alpha_kinase: domain 1 of 1, from 4075 to 4088: score -0.1, E = 6.1
*->NLGeeGIekFfssH<-*
++G++GI+ F +H
gi|1977523 4075 DMGADGIKSFAETH 4088
B1: domain 1 of 1, from 4094 to 4131: score 0.4, E = 9.7
CS XXXXXXX-EEEEEE EE-SSS-EEEEEEEE
*->tPEepkEevtiKan.........liFaDGktqtAeFKG<-*
PEe+kE+ + +n+ + ++ ++ aDG+t tAe +G
gi|1977523 4094 APEEEKENSSVSVNganvnsaqgATVADGNTETAETQG 4131
VirB: domain 1 of 1, from 4124 to 4133: score 1.5, E = 10
*->tipaEiqglRg<-*
t++aE+q +R+
gi|1977523 4124 TETAETQ-GRA 4133
Sigma54_DBD: domain 1 of 1, from 4147 to 4166: score 1.5, E = 7.4
CS XXXXXXXXXXXXXXXXXXXX
*->ksylkeklqeAkWLirsLeq<-*
+ + ++k++e+k L+++L+q
gi|1977523 4147 TIFSQDKQKEMKSLVENLKQ 4166
Tat: domain 1 of 1, from 4151 to 4170: score 2.0, E = 9.7
CS XXXXXXXXXXXX.XXXXXXX
*->edkeissedlltqlsgPlea<-*
+dk+++ + l + l+++l+a
gi|1977523 4151 QDKQKEMKSLVENLKQNLTA 4170
XLF: domain 1 of 1, from 4159 to 4189: score 3.0, E = 2.1
*->slalesqqvieeLidlLneKDaDDDFdDFQFFGiKreidkLqdkled
sl+ + +q + dlLn+K++ d+L ++++
gi|1977523 4159 SLVENLKQ--NLTADLLNMKEK--------------TFDFLRNSGHL 4189
<-*
gi|1977523 - -
HemolysinCabind: domain 2 of 7, from 4224 to 4241: score 6.1, E = 1.1
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG G+D+ y ++ +++
gi|1977523 4224 WGGRGDDVFYATGTSNIF 4241
PalH: domain 1 of 1, from 4228 to 4239: score 0.9, E = 3.2
*->GdDmlfvdptsn<-*
GdD++ +++tsn
gi|1977523 4228 GDDVFYATGTSN 4239
HemolysinCabind: domain 3 of 7, from 4242 to 4248: score 1.8, E = 22
CS E--SSS-
*->yGGaGnD<-*
+GG+GnD
gi|1977523 4242 TGGEGND 4248
HemolysinCabind: domain 4 of 7, from 4260 to 4267: score 4.0, E = 4.9
CS E--SSS-E
*->yGGaGnDt<-*
+GG+GnDt
gi|1977523 4260 FGGDGNDT 4267
Hep_Hag: domain 2 of 2, from 4307 to 4330: score 0.7, E = 50
CS ESTT-EE -STTEEEESTTTE
*->iGsnakA....sgensvAlGgnal<-*
+G+ ++++++++ ++sv +G+n++
gi|1977523 4307 SGNFNRVdtgdDQDYSVTIGNNNQ 4330
DUF1655: domain 1 of 1, from 4324 to 4335: score 1.8, E = 9.4
*->flgNgyQVEliea<-*
++gN QVEl a
gi|1977523 4324 TIGNNNQVEL-GA 4335
HemolysinCabind: domain 5 of 7, from 4347 to 4358: score 3.7, E = 5.8
CS -EEEEESSCGEE
*->DtLyGgaGnDtl<-*
++++ gaGnD+
gi|1977523 4347 NRINAGAGNDVV 4358
HemolysinCabind: domain 6 of 7, from 4366 to 4376: score 5.9, E = 1.3
CS EEEEESSCGEE
*->tLyGgaGnDtl<-*
+L+Gg+G+D l
gi|1977523 4366 VLNGGDGDDHL 4376
HemolysinCabind: domain 7 of 7, from 4388 to 4405: score 2.3, E = 16
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
+GG+G+D + g+ +t+
gi|1977523 4388 NGGEGRDLMVLGGYQNTF 4405
Terminase_1: domain 1 of 1, from 4509 to 4523: score 1.1, E = 1.6
*->vALImAlgrAlyaee<-*
++ I+Al +A++++e
gi|1977523 4509 DSAIDALVQAMSGFE 4523
DUF2019: domain 1 of 1, from 4520 to 4536: score 4.6, E = 0.68
*->SkwfPQaGdAgmslrnLd<-*
S+++PQaGd g ++ L+
gi|1977523 4520 SGFEPQAGDNGF-IDSLE 4536
//