hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            198435791.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: gi|198435791|ref|XP_002121699.1|
Accession:      [none]
Description:    PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family member (nekl-1) [Ciona intestinalis]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Pkinase         Protein kinase domain                   271.8    1.5e-78   1
Pkinase_Tyr     Protein tyrosine kinase                  83.4    2.4e-24   1
RCC1            Regulator of chromosome condensation     74.4    1.1e-20   5
Prefoldin_2     Prefoldin subunit                        12.0      0.015   1
FAD_binding_1   FAD binding domain                        4.9       0.33   1
DUF1910         Domain of unknown function (DUF1910)      4.9       0.47   1
GSPII_E_N       GSPII_E N-terminal domain                 5.2       0.82   1
Ribosomal_L38e  Ribosomal L38e protein family             4.3       0.97   1
Jnk-SapK_ap_N   JNK_SAPK-associated protein-1             3.7        1.1   1
Phage_terminase Phage terminase small subunit             4.7        1.5   1
Snf7            Snf7                                      3.5        1.5   1
SIM_C           Single-minded protein C-terminus          2.5        1.6   1
Pox_G5          Poxvirus G5 protein                      -0.2        1.7   1
Mu-like_Com     Mu-like prophage protein Com              4.1        1.8   1
SATase_N        Serine acetyltransferase, N-terminal      2.7        1.8   1
UPF0102         Uncharacterised protein family UPF010     3.6        1.9   1
DUF1445         Protein of unknown function (DUF1445)     2.7        1.9   1
DUF1471         Protein of unknown function (DUF1471)     3.9          2   1
DUF2155         Uncharacterized protein conserved in      2.3        2.1   1
CAF1            CAF1 family ribonuclease                  1.2        2.2   1
Prefoldin       Prefoldin subunit                         3.6        2.7   1
DUF2262         Uncharacterized protein conserved in      2.0        3.1   1
EIAV_GP45       EIAV glycoprotein, gp45                  -0.0        4.1   1
MTD             methylene-5,6,7,8-tetrahydromethanopt    -0.1        4.4   1
CsrA            Global regulator protein family           2.1        4.4   1
Nod_GRP         Nodule-specific GRP repeat                3.0        4.5   1
HPPK            7,8-dihydro-6-hydroxymethylpterin-pyr     1.3        4.6   1
Peptidase_C14   Caspase domain                            0.5        5.6   1
L51_S25_CI-B8   Mitochondrial ribosomal protein L51 /     3.8        5.9   1
Metallophos     Calcineurin-like phosphoesterase          2.1        6.2   1
C6              C6 domain                                 1.5        7.2   1
POR             Pyruvate ferredoxin/flavodoxin oxidor     0.5        8.1   1
Hira            TUP1-like enhancer of split               1.2        8.3   1
DP              Transcription factor DP                   1.1        8.4   1
DUF644          Protein of unknown function, DUF644      -0.2        8.5   1
TP901-1_ORF40   TP901-1 ORF40-like protein                1.4        8.6   1
B56             Protein phosphatase 2A regulatory B s    -0.8        9.5   1
RNA_pol_Rpb1_5  RNA polymerase Rpb1, domain 5             0.1        9.6   1
MAP1_LC3        Microtubule associated protein 1A/1B,     0.6        9.7   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
L51_S25_CI-B8     1/1      22    40 ..    45    61 .]     3.8      5.9
DUF1910           1/1     118   136 ..   135   154 .]     4.9     0.47
Ribosomal_L38e    1/1     139   149 ..    67    77 .]     4.3     0.97
UPF0102           1/1     202   211 ..    90    99 .]     3.6      1.9
DUF644            1/1     238   255 ..   335   352 .]    -0.2      8.5
Pkinase           1/1     275   518 ..     1   278 [.   271.8  1.5e-78
Pkinase_Tyr       1/1     275   468 ..     1   210 [.    83.4  2.4e-24
DUF1471           1/1     282   293 ..    77    88 .]     3.9        2
Pox_G5            1/1     334   350 ..   538   557 .]    -0.2      1.7
GSPII_E_N         1/1     348   365 ..     1    18 [.     5.2     0.82
MTD               1/1     406   423 ..     1    18 [.    -0.1      4.4
EIAV_GP45         1/1     416   429 ..     1    14 [.    -0.0      4.1
DUF2155           1/1     454   460 ..    91    97 .]     2.3      2.1
SATase_N          1/1     497   518 ..    52    73 ..     2.7      1.8
MAP1_LC3          1/1     601   611 ..    97   106 .]     0.6      9.7
RCC1              1/5     602   616 ..     4    20 ..     6.3     0.42
Metallophos       1/1     613   698 ..    96   124 .]     2.1      6.2
C6                1/1     632   640 ..    97   105 .]     1.5      7.2
RCC1              2/5     651   700 ..     1    68 []    15.5  0.00099
HPPK              1/1     675   686 ..   133   144 .]     1.3      4.6
Hira              1/1     691   709 ..    20    38 ..     1.2      8.3
RCC1              3/5     703   750 ..     1    68 []    29.1  1.1e-07
POR               1/1     712   721 ..     1    10 [.     0.5      8.1
Mu-like_Com       1/1     736   744 ..     1     9 [.     4.1      1.8
DUF1445           1/1     746   752 ..   137   143 .]     2.7      1.9
Peptidase_C14     1/1     754   774 ..     1    21 [.     0.5      5.6
RNA_pol_Rpb1_5    1/1     765   778 ..   264   278 .]     0.1      9.6
RCC1              4/5     786   816 ..    21    68 .]     7.7     0.17
RCC1              5/5     821   868 ..     1    68 []    15.8   0.0008
SIM_C             1/1    1027  1045 ..   319   337 .]     2.5      1.6
CsrA              1/1    1056  1074 ..    43    63 .]     2.1      4.4
CAF1              1/1    1066  1241 ..   187   231 ..     1.2      2.2
Nod_GRP           1/1    1076  1088 ..     1    15 [.     3.0      4.5
FAD_binding_1     1/1    1095  1119 ..     1    25 [.     4.9     0.33
TP901-1_ORF40     1/1    1108  1148 ..    33    83 ..     1.4      8.6
Phage_terminase   1/1    1165  1173 ..     1     9 [.     4.7      1.5
Prefoldin_2       1/1    1186  1219 ..    73   106 .]    12.0    0.015
Prefoldin         1/1    1187  1225 ..    84   122 .]     3.6      2.7
DP                1/1    1189  1207 ..     1    19 [.     1.1      8.4
DUF2262           1/1    1196  1211 ..     1    16 [.     2.0      3.1
Jnk-SapK_ap_N     1/1    1201  1230 ..   128   159 .]     3.7      1.1
B56               1/1    1219  1249 ..   384   415 .]    -0.8      9.5
Snf7              1/1    1232  1253 ..     1    22 [.     3.5      1.5

Alignments of top-scoring domains:
L51_S25_CI-B8: domain 1 of 1, from 22 to 40: score 3.8, E = 5.9
                   *->P.P.egerektislrnlsa<-*
                      P+P+ ge+ ++ +l+n ++
  gi|1984357    22    PnPgHGESKQKANLNNNHS    40

DUF1910: domain 1 of 1, from 118 to 136: score 4.9, E = 0.47
                   *->LgILLevdkdWrlkrLaali<-*
                      ++IL ++d + +++ L+ali
  gi|1984357   118    VAILYHYDSN-NFDSLLALI    136

Ribosomal_L38e: domain 1 of 1, from 139 to 149: score 4.3, E = 0.97
                   *->SLPPgLkVkeL<-*
                      SLPPg kV+ +
  gi|1984357   139    SLPPGQKVNSV    149

UPF0102: domain 1 of 1, from 202 to 211: score 3.6, E = 1.9
                   *->dcRiDVvvVr<-*
                      +cR D+v+V+
  gi|1984357   202    NCRLDLVAVG    211

DUF644: domain 1 of 1, from 238 to 255: score -0.2, E = 8.5
                   *->estIrdlAkeklavGkFe<-*
                      ++tI d++++k+ vG F
  gi|1984357   238    MDTILDVGDGKQTVGEFY    255

Pkinase: domain 1 of 1, from 275 to 518: score 271.8, E = 1.5e-78
                CS    EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEHHHCCCCCCHHHHH
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e+++ +G+G+fGt  + k+k+++ +V++K+i+ ++ +s++++ a +
  gi|1984357   275    FEKIRMVGKGAFGTAVLYKKKDDNSLVVLKEINMSELNSQERQMAMN 321

                CS EHHHHHHHHHSSSSB--EEEEEEETTEEEEEEE--TS-..EEBHHHHHH.
                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     E ++l++L+HpNI+ ++d+fed++ l + +Ey++ G     L  +l
  gi|1984357   322 --ETRVLAMLNHPNIICYYDTFEDNGVLMIEMEYADDG----TLAQFLA- 364

                CS .HHHHST---HHHHHHHHHHHHHHHHHHHHTTEE-S--SGGGEEEETTTE
                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                    +++ ++  +e+ + +++ Qi++gl+++H+++++HRDLK +NI+l ++gv
  gi|1984357   365 -KSESAI--EEKKIFSMFSQIVSGLAHMHDQKVLHRDLKTANIFLTKEGV 411

                CS E--EEEE--GTT.E...E CSS C-S--S-GGGS-HHHHCCS-CTHHHHH
                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
                   v    Ki+DFG++k+  ++s   ++t+ GTp+Y++PE++  g+ y+ k+D
  gi|1984357   412 V----KIGDFGVSKV--IsSRIaANTVLGTPYYISPEICE-GKSYDEKSD 454

                CS HHHHHHHHHHHHHSS-TTSSSHHHHCCTHHHHSSHHH......TTS....
                   vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
                   +W+lG+ilye++t++  F g      +  +l+ ki++++++  +   +
  gi|1984357   455 IWALGCILYEMVTRQRTFEGT-----NLPALVNKIMQGSIPPIRGDYS-- 497

                CS ............HHHHHHHHHHT-SSGGGSTTH
                   srsefrrlpnlseeakdLikkcLnkDPskRlta<-*
                                + + Lik++L+kDP  R+ta
  gi|1984357   498 ------------NDIRRLIKDMLQKDPDLRPTA    518

Pkinase_Tyr: domain 1 of 1, from 275 to 468: score 83.4, E = 2.4e-24
                CS    EEEEEEEEEETTEEEEEEEEECSTTSTEEEEEEEEESS SSHHHH..
                   *->ltlgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLke.gaseeeie
                       +++++ G+GaFG+ ++ + k    +++  V  K ++ +   ++e
  gi|1984357   275    FEKIRMVGKGAFGTAVLYKKK----DDNSLVVLKEINMsELNSQE-- 315

                CS HHHHHHHHHHHHHHTCTTTB-EEEEEECSESSSS..EEEEEEETTTEBHH
                   redFlrEAsiMkklGdHpNiVrLlGvCtlkqgePnglyiVtEymegGdLl
                   r+  ++E +++  l +HpNi++++      + +   l+i +Ey+  G L
  gi|1984357   316 RQMAMNETRVLAML-NHPNIICYYDTFE--DNGV--LMIEMEYADDGTLA 360

                CS HHHHHTTCTTTSHHHHHHHHHHHHHHHHHHHHHTTEECSTSSGGGEEEET
                   dfLrkhreggkLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVse
                    fL k   + ++  k + s+  Qi +G+++ ++++  HRDL + N+ +++
  gi|1984357   361 QFLAKS--ESAIEEKKIFSMFSQIVSGLAHMHDQKVLHRDLKTANIFLTK 408

                CS TTEEEE-STTTHEES         TTSSEETEETTSSECCGGGSHHHHHH
                   nlvVKIsDFGLaRdi.........ysddyYvrkrgggklPvkWmAPEslk
                   ++vVKI+DFG ++ i+++   ++   + yY              +PE
  gi|1984357   409 EGVVKIGDFGVSKVIssriaantvLGTPYY-------------ISPEICE 445

                CS HCEEHHHHHHHHHHHHHHHHHTT
                   ygkFtskSDVWSFGVlLWEiftl<-*
                    + + +kSD+W+ G  L+E++t+
  gi|1984357   446 GKSYDEKSDIWALGCILYEMVTR    468

DUF1471: domain 1 of 1, from 282 to 293: score 3.9, E = 2
                   *->ngnwhatAdiYk<-*
                      ++  ++tA++Yk
  gi|1984357   282    GKGAFGTAVLYK    293

Pox_G5: domain 1 of 1, from 334 to 350: score -0.2, E = 1.7
                   *->lLgynkqedkFYFnksiiIk<-*
                      +++y    d+F++n  + I+
  gi|1984357   334    IICY---YDTFEDNGVLMIE    350

GSPII_E_N: domain 1 of 1, from 348 to 365: score 5.2, E = 0.82
                CS    HHHTT-S-HHHHHHHHHH
                   *->LvelGliseeqlaeaLae<-*
                      ++e+++++  +la++La+
  gi|1984357   348    MIEMEYADDGTLAQFLAK    365

MTD: domain 1 of 1, from 406 to 423: score -0.1, E = 4.4
                CS    EEEEEEEES--HHHHHTT
                   *->vvKigiiKcGniGtslvv<-*
                        K g++K+G+ G+s v+
  gi|1984357   406    LTKEGVVKIGDFGVSKVI    423

EIAV_GP45: domain 1 of 1, from 416 to 429: score -0.0, E = 4.1
                   *->DFGisAivAAivAA<-*
                      DFG+s ++   +AA
  gi|1984357   416    DFGVSKVISSRIAA    429

DUF2155: domain 1 of 1, from 454 to 460: score 2.3, E = 2.1
                   *->DVWVlrC<-*
                      D+W+l C
  gi|1984357   454    DIWALGC    460

SATase_N: domain 1 of 1, from 497 to 518: score 2.7, E = 1.8
                CS    HHHHHHHHHHHHHH-THHHHHH
                   *->atqLrelFedaleadpeiieaa<-*
                      ++ +r+l++d+l++dp+++  a
  gi|1984357   497    SNDIRRLIKDMLQKDPDLRPTA    518

MAP1_LC3: domain 1 of 1, from 601 to 611: score 0.6, E = 9.7
                CS    EEES -----X
                   *->mvYS.gEnTFG<-*
                      +vYS gEn++G
  gi|1984357   601    VVYSwGENAYG    611

RCC1: domain 1 of 5, from 602 to 616: score 6.3, E = 0.42
                CS    EEEEEEEEETTSTTSSS
                   *->VYslGcFRgenGqLGlg<-*
                      VYs+G   + +GqLG g
  gi|1984357   602    VYSWGE--NAYGQLGHG    616

Metallophos: domain 1 of 1, from 613 to 698: score 2.1, E = 6.2
                CS    EESSSSSCC
                   *->lvHgplsps......................................
                      l+Hg+l p  +++  +  ++++    + +++ +    +++     ++
  gi|1984357   613    LGHGHLEPVakphviealkgkpitttscgsnfsvfvtdngilltcgd 659

                CS                   HHHHHH TTSSEEEEESSSSE
                   ..................leellk.ngvdlvirGHtHvp<-*
                   ++ +  + ++ ++  ++++ e l++ +v  v++G  Hv
  gi|1984357   660 gsqgclgqgnlssttrpsMVEPLLsVDVSTVACGDAHVV    698

C6: domain 1 of 1, from 632 to 640: score 1.5, E = 7.2
                   *->GtvInsvsC<-*
                      G++I+++sC
  gi|1984357   632    GKPITTTSC    640

RCC1: domain 2 of 5, from 651 to 700: score 15.5, E = 0.00099
                CS    TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
                   *->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
                       G +++ G   g +G LG g   +  +           P  v
  gi|1984357   651    NGILLTCGD--GSQGCLGQGNLSSTTR-----------PSMV----- 679

                CS GGSSSSCEEEEEEESSEEEEE
                   ssslsekVvsvasGgqHtval<-*
                      ls++V+ va+G+ H val
  gi|1984357   680 EPLLSVDVSTVACGDAHVVAL    700

HPPK: domain 1 of 1, from 675 to 686: score 1.3, E = 4.6
                CS    HHHHHHHHHHCT
                   *->RpFVLvPLleia<-*
                      Rp +++PLl+++
  gi|1984357   675    RPSMVEPLLSVD    686

Hira: domain 1 of 1, from 691 to 709: score 1.2, E = 8.3
                   *->cngsykLlclTskGlLyvW<-*
                      ++g++++++l+s G+ y+W
  gi|1984357   691    ACGDAHVVALSSEGEIYAW    709

RCC1: domain 3 of 5, from 703 to 750: score 29.1, E = 1.1e-07
                CS    TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
                   *->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
                      +G +Y++Gc  g +G+LG+g +  + +           P  v
  gi|1984357   703    EGEIYAWGC--GSQGRLGTGHDDHCIE-----------PHRV----- 731

                CS GGSSSSCEEEEEEESSEEEEE
                   ssslsekVvsvasGgqHtval<-*
                      ++ +  +v +G + t  +
  gi|1984357   732 --AINQAIRDVRCGHDGTMFI    750

POR: domain 1 of 1, from 712 to 721: score 0.5, E = 8.1
                CS    TTSSHHHHHH
                   *->GGQGvvgAak<-*
                      G+QG +g+++
  gi|1984357   712    GSQGRLGTGH    721

Mu-like_Com: domain 1 of 1, from 736 to 744: score 4.1, E = 1.8
                   *->MlkniRCGH<-*
                        +++RCGH
  gi|1984357   736    AIRDVRCGH    744

DUF1445: domain 1 of 1, from 746 to 752: score 2.7, E = 1.9
                   *->GhMLiTD<-*
                      G M+iTD
  gi|1984357   746    GTMFITD    752

Peptidase_C14: domain 1 of 1, from 754 to 774: score 0.5, E = 5.6
                CS    EEEEEEE--S-SSTCTS--TT
                   *->glALiIgnnyfgtatlaeLrG<-*
                      g  L +gnn+++++ l+e++G
  gi|1984357   754    GTLLACGNNQYNKLGLNERTG    774

RNA_pol_Rpb1_5: domain 1 of 1, from 765 to 778: score 0.1, E = 9.6
                CS    STTHHTTS.SS-HHH
                RF    xxxxxxxxxxxxxxx
                   *->tRhGlnrsksSfilm<-*
                      ++ Gln++ + fi+m
  gi|1984357   765    NKLGLNER-TGFIMM    778

RCC1: domain 4 of 5, from 786 to 816: score 7.7, E = 0.17
                CS    TTSCEEETGGGGTHHHHEEEEE--B-SGGSSSSCEEEEEEESSEEEE
                   *->eeveeskGGRqGLERLlvPvlvmLKsrssslsekVvsvasGgqHtva
                      +eve++k           P+ v       +    Vv+va G  Ht++
  gi|1984357   786    TEVECRK----------TPTVV-------KSIKGVVDVAMGRHHTTV 815

                CS E
                   l<-*
                   l
  gi|1984357   816 L    816

RCC1: domain 5 of 5, from 821 to 868: score 15.8, E = 0.0008
                CS    TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
                   *->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
                        +V+ lG+  + +Gq G+g +               +P lv
  gi|1984357   821    --QVLMLGS--NKEGQMGTGDNKLRT-----------SPYLV----- 847

                CS GGSSSSCEEEEEEESSEEEEE
                   ssslsekVvsvasGgqHtval<-*
                   +   + +V +va+G+ +t++
  gi|1984357   848 KCIKDYDVMVVACGNTYTAVG    868

SIM_C: domain 1 of 1, from 1027 to 1045: score 2.5, E = 1.6
                   *->PvalSrlssPlpdrltkSk<-*
                      P ++++ ss  +d+ + S
  gi|1984357  1027    PQFHHSQSSNDEDYVSSSD    1045

CsrA: domain 1 of 1, from 1056 to 1074: score 2.1, E = 4.4
                CS    ECCCHCHHHCHH-TTS..-SS
                   *->lReElyerIlaenqkaavaSk<-*
                      lReEl ++++ +  k  + Sk
  gi|1984357  1056    LREELENAVVIQQSK--INSK    1074

CAF1: domain 1 of 1, from 1066 to 1241: score 1.2, E = 2.2
                CS    ............TTCHHHHHH
                RF    xxxxxxxxxxxxxxxxxxxxx
                   *->peqthetsksvpeddkkfiis..........................
                      + q+ ++sk+v++++k     + ++++++++++++++ + ++ ++++
  gi|1984357  1066    IQQSKINSKTVNKEQKSKGKDgwksgnstprrsptnnyrihpierqk 1112

                CS
                RF
                   ..................................................
                    ++ ++++++++++ +++ ++++++++++++++++++++++++++++ ++
  gi|1984357  1113 lnsaksdsssdsshikssvtssskrretngtgtrgrsretsprpnksmnn 1162

                CS
                RF
                   ..................................................
                   +  +++++++++ +++++ +++ +  ++ ++ + ++++++++ ++ ++++
  gi|1984357  1163 pymgrnrspnrpiqsrsparspiklakeverlsmekkstqkefeklreeh 1212

                CS       .SHHHHHHHHHHHHHHHHHHHHHH
                RF       xxxxxxxxxxxxxxxxxxxxxxxx
                   ......edddyrkekenleqareqenlnel<-*
                    +  +++ + y+ke+ ++e +++++ + +l
  gi|1984357  1213 asmlrsIQETYEKERMQQEEQILKLKE-QL    1241

Nod_GRP: domain 1 of 1, from 1076 to 1088: score 3.0, E = 4.5
                   *->GvtkeskTkigiDgW<-*
                       v ke k+k g+DgW
  gi|1984357  1076    -VNKEQKSK-GKDGW    1088

FAD_binding_1: domain 1 of 1, from 1095 to 1119: score 4.9, E = 0.33
                CS    S-CTTC-EEEEEEEEEE-S-TTSSS
                   *->ppfdaknpFlasvvvnreLtkpgsd<-*
                      p ++++n+++ +++++++L++++sd
  gi|1984357  1095    PRRSPTNNYRIHPIERQKLNSAKSD    1119

TP901-1_ORF40: domain 1 of 1, from 1108 to 1148: score 1.4, E = 8.6
                   *->veaemknrapvdtgktgrhlrrsIkveikdgklqgtvvvglrvggln
                      +e+++ n a++d ++   h++ s+++ +k+++  gt+
  gi|1984357  1108    IERQKLNSAKSDSSSDSSHIKSSVTSSSKRRETNGTG---------- 1144

                   prGg<-*
                   +rG+
  gi|1984357  1145 TRGR    1148

Phage_terminase: domain 1 of 1, from 1165 to 1173: score 4.7, E = 1.5
                   *->MARqRsPdR<-*
                      M R RsP+R
  gi|1984357  1165    MGRNRSPNR    1173

Prefoldin_2: domain 1 of 1, from 1186 to 1219: score 12.0, E = 0.015
                CS    HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTS--
                   *->tlekeiktLekqleklekeleelkeelqkllgqa<-*
                      +l ke+++L  ++++ +ke+e+l+ee+  +l +
  gi|1984357  1186    KLAKEVERLSMEKKSTQKEFEKLREEHASMLRSI    1219

Prefoldin: domain 1 of 1, from 1187 to 1225: score 3.6, E = 2.7
                CS    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHXX
                   *->ldkrieelekqlekleeelekLrdqittleanlqqvqqk<-*
                      l k +e l+   ++ ++e ekLr++++ +++ +q+ + k
  gi|1984357  1187    LAKEVERLSMEKKSTQKEFEKLREEHASMLRSIQETYEK    1225

DP: domain 1 of 1, from 1189 to 1207: score 1.1, E = 8.4
                   *->qeiekLeeErqkrkeRIek<-*
                      +e+e+L +E++  + ++ek
  gi|1984357  1189    KEVERLSMEKKSTQKEFEK    1207

DUF2262: domain 1 of 1, from 1196 to 1211: score 2.0, E = 3.1
                   *->lsnkseidefekrfee<-*
                      + +ks+++efek+ ee
  gi|1984357  1196    MEKKSTQKEFEKLREE    1211

Jnk-SapK_ap_N: domain 1 of 1, from 1201 to 1230: score 3.7, E = 1.1
                   *->telKkEynslhERytklLkkyvEyvErqkdei<-*
                      t+  kE+++l+E +  +L+   E  E+ ++++
  gi|1984357  1201    TQ--KEFEKLREEHASMLRSIQETYEKERMQQ    1230

B56: domain 1 of 1, from 1219 to 1249: score -0.8, E = 9.5
                   *->csknykeeekkekekekkrektWkklieeaAs<-*
                      +++ y++e+++++e+  k ++   + ie++ +
  gi|1984357  1219    IQETYEKERMQQEEQILKLKEQLHS-IEQKQM    1249

Snf7: domain 1 of 1, from 1232 to 1253: score 3.5, E = 1.5
                   *->eailsLrkaireLdkkqeslek<-*
                      e+il+L+++  ++++kq+ + +
  gi|1984357  1232    EQILKLKEQLHSIEQKQMEVRQ    1253

//