hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 210108252.fa
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Query sequence: gi|210108252|gb|EEA56161.1|
Accession: [none]
Description: hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Pkinase Protein kinase domain 269.4 8.4e-78 1
TNFR_c6 TNFR/NGFR cysteine-rich region 112.0 3e-32 4
RCC1 Regulator of chromosome condensation 81.6 9.2e-23 4
Pkinase_Tyr Protein tyrosine kinase 75.9 3.7e-22 1
Death Death domain 43.2 1.1e-11 1
NolX NolX protein 5.6 0.17 1
TPD52 Tumour protein D52 family 5.6 0.29 1
NCD3G Nine Cysteines Domain of family 3 GPC 5.9 0.32 1
Herpes_glycop_D Herpesvirus glycoprotein D 3.5 0.46 1
Kdo Lipopolysaccharide kinase (Kdo/WaaP) 5.0 0.53 1
MTD methylene-5,6,7,8-tetrahydromethanopt 2.7 0.58 1
HrcA HrcA protein C terminal domain 4.8 0.61 1
DUF1471 Protein of unknown function (DUF1471) 5.4 0.72 1
UPF0060 Uncharacterised BCR, YnfA/UPF0060 fam 1.8 0.89 1
Prefoldin_2 Prefoldin subunit 5.5 0.97 1
DUF74 Domain of unknown function DUF74 4.2 0.99 1
Hex_IIIa Hexon-associated protein (IIIa) 2.2 1.1 1
DUF231 Arabidopsis proteins of unknown funct 2.8 1.4 1
Sec66 Preprotein translocase subunit Sec66 2.7 1.5 1
Duffy_binding Duffy binding domain 2.6 1.6 1
CBM_14 Chitin binding Peritrophin-A domain 3.7 1.7 1
DUF2155 Uncharacterized protein conserved in 2.3 2.1 1
RolB_RolC RolB/RolC glucosidase family 2.2 2.4 1
RUN RUN domain 2.3 2.9 1
Phge_rel_HI1409 Phage-related protein (Phge_rel_HI140 2.9 3 1
AzlD Branched-chain amino acid transport p 3.0 3.2 1
HCV_NS2 Hepatitis C virus non-structural prot 1.0 3.7 1
SpoOE-like Spo0E like sporulation regulatory pro 3.9 3.9 1
Prefoldin Prefoldin subunit 3.0 4 1
Chordopox_A13L Chordopoxvirus A13L protein 3.1 4.1 1
DUF2205 Predicted coiled-coil protein (DUF220 2.2 4.2 1
NUDE_C NUDE protein, C-terminal conserved re 0.5 4.3 1
DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase 0.8 4.8 1
Haemat_rec_S_F2 Haematopoeitin receptor binding domai 2.4 5 1
Pacifastin_I Pacifastin inhibitor (LCMII) 3.8 5 1
DUF1570 Protein of unknown function (DUF1570) 1.1 5.5 1
ILVD_EDD Dehydratase family -0.1 5.6 1
DUF347 Repeat of Unknown Function (DUF347) 3.2 5.6 1
C1_3 C1-like domain 1.6 5.7 1
Cytochrom_B561 Eukaryotic cytochrome b561 0.9 6 1
NadA Quinolinate synthetase A protein 0.7 6.4 1
Ykof YKOF-related Family 1.5 6.7 1
Mer2 Mer2 0.9 6.9 1
WD40 WD domain, G-beta repeat 2.1 7 1
CamS CamS sex pheromone cAM373 precursor 0.3 7.1 1
DUF429 Protein of unknown function (DUF429) 0.2 7.5 1
Omega_Repress Omega Transcriptional Repressor 1.4 7.9 1
ocr DNA mimic ocr 0.6 8.4 1
YrbL-PhoP_reg PhoP regulatory network protein YrbL 0.5 8.5 1
YDG_SRA YDG/SRA domain 0.7 8.6 1
2_5_RNA_ligase 2',5' RNA ligase family 1.6 9.4 1
DUF1819 Putative inner membrane protein (DUF1 0.4 9.4 1
CDC73 RNA pol II accessory factor, Cdc73 fa -0.3 9.4 1
DUF1391 Protein of unknown function (DUF1391) 1.8 9.6 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
NolX 1/1 26 72 .. 1 56 [. 5.6 0.17
Phge_rel_HI1409 1/1 71 95 .. 1 27 [. 2.9 3
DUF1570 1/1 92 102 .. 130 140 .] 1.1 5.5
HrcA 1/1 184 198 .. 1 15 [. 4.8 0.61
C1_3 1/1 204 218 .. 5 19 .. 1.6 5.7
Pkinase 1/1 330 583 .. 1 287 [] 269.4 8.4e-78
Pkinase_Tyr 1/1 330 524 .. 1 210 [. 75.9 3.7e-22
DUF1471 1/1 333 348 .. 71 88 .] 5.4 0.72
DUF74 1/1 340 348 .. 99 107 .] 4.2 0.99
CamS 1/1 344 357 .. 340 353 .] 0.3 7.1
Mer2 1/1 363 376 .. 211 226 .] 0.9 6.9
Kdo 1/1 414 470 .. 110 171 .. 5.0 0.53
YrbL-PhoP_reg 1/1 433 465 .. 129 161 .. 0.5 8.5
MTD 1/1 461 478 .. 1 18 [. 2.7 0.58
ILVD_EDD 1/1 476 485 .. 582 592 .] -0.1 5.6
DUF2155 1/1 510 516 .. 91 97 .] 2.3 2.1
Sec66 1/1 574 610 .. 153 189 .] 2.7 1.5
DUF231 1/1 575 582 .. 181 188 .] 2.8 1.4
HCV_NS2 1/1 632 666 .. 239 273 .. 1.0 3.7
RCC1 1/4 659 708 .. 1 68 [] 12.9 0.0055
RCC1 2/4 711 760 .. 1 68 [] 12.4 0.0074
WD40 1/1 747 770 .. 12 38 .] 2.1 7
RCC1 3/4 763 812 .. 1 68 [] 31.6 2.3e-08
UPF0060 1/1 766 772 .. 103 109 .] 1.8 0.89
DUF1391 1/1 817 830 .. 1 14 [. 1.8 9.6
Hex_IIIa 1/1 854 868 .. 1 15 [. 2.2 1.1
DUF429 1/1 868 878 .. 1 11 [. 0.2 7.5
RCC1 4/4 883 934 .. 1 68 [] 24.7 2.1e-06
Omega_Repress 1/1 893 921 .. 1 30 [. 1.4 7.9
RolB_RolC 1/1 1101 1110 .. 217 227 .] 2.2 2.4
NUDE_C 1/1 1141 1151 .. 206 217 .] 0.5 4.3
TPD52 1/1 1197 1220 .. 1 24 [. 5.6 0.29
DUF2205 1/1 1306 1321 .. 70 85 .] 2.2 4.2
YDG_SRA 1/1 1347 1357 .. 1 11 [. 0.7 8.6
2_5_RNA_ligase 1/1 1350 1366 .. 1 17 [. 1.6 9.4
Prefoldin 1/1 1385 1439 .. 68 122 .] 3.0 4
Prefoldin_2 1/1 1396 1433 .. 69 106 .] 5.5 0.97
NadA 1/1 1401 1415 .. 1 16 [. 0.7 6.4
SpoOE-like 1/1 1447 1459 .. 1 13 [. 3.9 3.9
CDC73 1/1 1455 1520 .. 1 70 [. -0.3 9.4
Ykof 1/1 1550 1563 .. 70 83 .] 1.5 6.7
TNFR_c6 1/4 1560 1593 .. 1 42 [] 18.3 0.00017
Pacifastin_I 1/1 1595 1602 .. 1 8 [. 3.8 5
TNFR_c6 2/4 1596 1636 .. 1 42 [] 32.6 1e-08
CBM_14 1/1 1637 1651 .. 35 49 .. 3.7 1.7
TNFR_c6 3/4 1638 1675 .. 1 42 [] 33.7 4.7e-09
Haemat_rec_S_F2 1/1 1642 1654 .. 20 32 .] 2.4 5
NCD3G 1/1 1675 1698 .. 29 51 .. 5.9 0.32
TNFR_c6 4/4 1678 1717 .. 1 42 [] 27.5 3.2e-07
ocr 1/1 1679 1686 .. 1 9 [. 0.6 8.4
Cytochrom_B561 1/1 1745 1778 .. 203 236 .] 0.9 6
Herpes_glycop_D 1/1 1753 1785 .. 376 409 .] 3.5 0.46
AzlD 1/1 1756 1773 .. 85 102 .] 3.0 3.2
DUF347 1/1 1757 1776 .. 40 60 .] 3.2 5.6
Chordopox_A13L 1/1 1760 1781 .. 12 33 .. 3.1 4.1
Duffy_binding 1/1 1777 1806 .. 1 27 [. 2.6 1.6
Death 1/1 1841 1908 .. 16 87 .] 43.2 1.1e-11
DegT_DnrJ_EryC1 1/1 1876 1893 .. 390 407 .] 0.8 4.8
RUN 1/1 1887 1895 .. 1 9 [. 2.3 2.9
DUF1819 1/1 1892 1901 .. 182 191 .] 0.4 9.4
Alignments of top-scoring domains:
NolX: domain 1 of 1, from 26 to 72: score 5.6, E = 0.17
*->mndsdllstmddlplqliysLlaslekavqtstsGnGdAsaqspass
+ s + s+ + + +++ y+ a+ +a++ ++++ + s
gi|2101082 26 KKLSKTSSAVPRNSADSTYRDAAAATGAAS---------DNKGEEGS 63
ieAdtapsa<-*
+++d++p++
gi|2101082 64 GQGDKTPAS 72
Phge_rel_HI1409: domain 1 of 1, from 71 to 95: score 2.9, E = 3
*->DglqnflaglGtgrdkqsaayqyyglf<-*
++++ +++Gtg k a++++y+++
gi|2101082 71 ASRRSSAGSQGTGEQK--ATGTAYNNT 95
DUF1570: domain 1 of 1, from 92 to 102: score 1.1, E = 5.5
*->lrklStrkPld<-*
++ + tr+P+d
gi|2101082 92 YNNTGTRPPVD 102
HrcA: domain 1 of 1, from 184 to 198: score 4.8, E = 0.61
*->lekllqkaasiLSeL<-*
l+++l++aa++L ++
gi|2101082 184 LDGILKQAAEVLGGI 198
C1_3: domain 1 of 1, from 204 to 218: score 1.6, E = 5.7
*->aCglpidgdpfYsCs<-*
aC+++++g+++Y+Cs
gi|2101082 204 ACVMHSSGGSIYVCS 218
Pkinase: domain 1 of 1, from 330 to 583: score 269.4, E = 8.4e-78
CS EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEHHHCCCCCCHHHHH
*->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
+e+++++G+G++Gt + ++k++ +V +K+i+ ++ ++++ a++
gi|2101082 330 FEKIRTVGKGAYGTAVLYRKKDDDSLVILKEINMHDLTASERQMALN 376
CS EHHHHHHHHHSSSSB--EEEEEEETTEEEEEEE--TS-..EEBHHHHHH.
lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
E+++l++L+HpNI++++d+fe+++ l + +Ey++gG L y+
gi|2101082 377 --EVKVLAMLDHPNIITYYDSFEEDGVLMIEMEYADGG----TLAKYVG- 419
CS .HHHHST---HHHHHHHHHHHHHHHHHHHHTTEE-S--SGGGEEEETTTE
trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
+r++pl se+e+ +++ Qi+ ++ ++H+++i+HRDLK +NI+l ++gv
gi|2101082 420 -QRETPL--SEKEILFMFQQIVAAIRHIHEHNILHRDLKTANIFLTKEGV 466
CS E--EEEE--GTT.E...E CSS C-S--S-GGGS-HHHHCCS-CTHHHHH
vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD
+ K++DFG++k + t+ +++++t+ GTp+Y++PE + g+ y k+D
gi|2101082 467 I----KVGDFGISKMM-TsANHgANTVLGTPYYISPEMCE-GKAYNDKSD 510
CS HHHHHHHHHHHHHSS-TTSSSHHHHCCTHHHHSSHHH......TTS....
vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi
+W+lG+i+ye+++ + F g+ + +l+ ki+ +++ + +
gi|2101082 511 IWALGCIMYEMACLHRTFEGS-----NLPALVNKIMNGQFAPVKGNYS-- 553
CS ............HHHHHHHHHHT-SSGGGSTTHHHHHTSGGG
srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
e+kdLi ++L++ P+ R++a e+l H
gi|2101082 554 ------------HEFKDLIQDMLQREPQYRPSANELLYHRLP 583
Pkinase_Tyr: domain 1 of 1, from 330 to 524: score 75.9, E = 3.7e-22
CS EEEEEEEEEETTEEEEEEEEECSTTSTEEEEEEEEE SSSSHHHH..
*->ltlgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.kegaseeeie
+++++ G+Ga+G+ ++ + k +++ V K ++ ++ + +e
gi|2101082 330 FEKIRTVGKGAYGTAVLYRKK----DDDSLVILKEInMHDLTASE-- 370
CS HHHHHHHHHHHHHHTCTTTB-EEEEEECSESSSS..EEEEEEETTTEBHH
redFlrEAsiMkklGdHpNiVrLlGvCtlkqgePnglyiVtEymegGdLl
r+ l+E++++ l dHpNi+ ++ +++ l+i +Ey+ gG L
gi|2101082 371 RQMALNEVKVLAML-DHPNIITYYDSFE--EDGV--LMIEMEYADGGTLA 415
CS HHHHHTTCTTTSHHHHHHHHHHHHHHHHHHHHHTTEECSTSSGGGEEEET
dfLrkhreggkLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVse
++ ++ + +L+ k++l + +Qi ++ + +++n+ HRDL + N+ +++
gi|2101082 416 KYVGQR--ETPLSEKEILFMFQQIVAAIRHIHEHNILHRDLKTANIFLTK 463
CS TTEEEE-STTTHEESTTSSEETEETTSSECCGGGS HHHHHHHCEEH
nlvVKIsDFGLaRdiysddyYvrkrgggklPvkWm....APEslkygkFt
++v+K++DFG ++ + +++ +g v ++ +PE + ++
gi|2101082 464 EGVIKVGDFGISKMM-------TSANHGANTVLGTpyyiSPEMCEGKAYN 506
CS HHHHHHHHHHHHHHHHTT
skSDVWSFGVlLWEiftl<-*
kSD+W+ G ++E+ l
gi|2101082 507 DKSDIWALGCIMYEMACL 524
DUF1471: domain 1 of 1, from 333 to 348: score 5.4, E = 0.72
*->arepgnngnwhatAdiYk<-*
+r+ ++ ++tA++Y+
gi|2101082 333 IRT--VGKGAYGTAVLYR 348
DUF74: domain 1 of 1, from 340 to 348: score 4.2, E = 0.99
*->AYGTAVvve<-*
AYGTAV ++
gi|2101082 340 AYGTAVLYR 348
CamS: domain 1 of 1, from 344 to 357: score 0.3, E = 7.1
*->AiIiReAnedepfV<-*
A+++R++++d+ +
gi|2101082 344 AVLYRKKDDDSLVI 357
Mer2: domain 1 of 1, from 363 to 376: score 0.9, E = 6.9
*->lhNiDLaLskRQaqlE<-*
+h DL +s RQ +l
gi|2101082 363 MH--DLTASERQMALN 376
Kdo: domain 1 of 1, from 414 to 470: score 5.0, E = 0.53
*->LvtwlaqWaddPpaeelrqalweavGrlIakmHragvnHtDLnahnI
L+ ++ q +++P++e+ + +++ ++I+ H ++ H+DL nI
gi|2101082 414 LAKYVGQ-RETPLSEKEILFMFQQIVAAIRHIHEHNILHRDLKTANI 459
Lldqeesvegkfkvw<-*
+l e g++kv+
gi|2101082 460 FLTKE----GVIKVG 470
YrbL-PhoP_reg: domain 1 of 1, from 433 to 465: score 0.5, E = 8.5
*->lreaLnefkryllenhIvardlnphNIVygrrs<-*
+++++ + +r++ e+ I+ rdl+ NI++++++
gi|2101082 433 MFQQIVAAIRHIHEHNILHRDLKTANIFLTKEG 465
MTD: domain 1 of 1, from 461 to 478: score 2.7, E = 0.58
CS EEEEEEEES--HHHHHTT
*->vvKigiiKcGniGtslvv<-*
K g+iK+G+ G+s ++
gi|2101082 461 LTKEGVIKVGDFGISKMM 478
ILVD_EDD: domain 1 of 1, from 476 to 485: score -0.1, E = 5.6
*->klVssAdWkGA<-*
k+ +sA+ GA
gi|2101082 476 KMMTSAN-HGA 485
DUF2155: domain 1 of 1, from 510 to 516: score 2.3, E = 2.1
*->DVWVlrC<-*
D+W+l C
gi|2101082 510 DIWALGC 516
Sec66: domain 1 of 1, from 574 to 610: score 2.7, E = 1.5
*->fNqaLrrRldailkrkeeekelWelkldkiesgflke<-*
+N+ L Rl + +r ee + +We l ++ +g +
gi|2101082 574 ANELLYHRLPELMARYEEGATEWEDELSSSLDGSKQL 610
DUF231: domain 1 of 1, from 575 to 582: score 2.8, E = 1.4
*->NelLyamL<-*
NelLy++L
gi|2101082 575 NELLYHRL 582
HCV_NS2: domain 1 of 1, from 632 to 666: score 1.0, E = 3.7
*->LaplsdwAaeGLRDLAvAvEPVvFspmEkKvItWG<-*
L+p+ +A+ R Av +E v+ mE +v tWG
gi|2101082 632 LTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWG 666
RCC1: domain 1 of 4, from 659 to 708: score 12.9, E = 0.0055
CS TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
*->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
+ VY++G g GqLG g + s +P v
gi|2101082 659 ERAVYTWGE--GSKGQLGHGDLLGRS-----------KPEMV----- 687
CS GGSSSSCEEEEEEESSEEEEE
ssslsekVvsvasGgqHtval<-*
v + +G+ + v +
gi|2101082 688 EALKGKSIVRACCGDGFSVFV 708
RCC1: domain 2 of 4, from 711 to 760: score 12.4, E = 0.0074
CS TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
*->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
G V + G g nG LG g +++s+ P l+
gi|2101082 711 NGIVMTCGD--GSNGCLGHGDWMSASR-----------PRLI----- 739
CS GGSSSSCEEEEEEESSEEEEE
ssslsekVvsvasGgqHtval<-*
ls++V ++G H va+
gi|2101082 740 EPLLSVDVRAISCGPHHVVAV 760
WD40: domain 1 of 1, from 747 to 770: score 2.1, E = 7
CS EEEEEEETTSSSEEEEEETTSEEEEEE
*->VtcvafspdsgpllasgSrDgtikiWd<-*
V+++++ p+ +++ ++Dg + W
gi|2101082 747 VRAISCGPH---HVVAVGSDGEVFAWG 770
RCC1: domain 3 of 4, from 763 to 812: score 31.6, E = 2.3e-08
CS TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
*->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
dG V+++G+ g G LGlg e++ + +P++v
gi|2101082 763 DGEVFAWGR--GKHGCLGLGDEEDHF-----------SPQEV----- 791
CS GGSSSSCEE EEEEESSEEEEE
ssslsekVv..svasGgqHtval<-*
++se+V + v +G + t l
gi|2101082 792 --QISEPVFirEVKCGVDGTMFL 812
UPF0060: domain 1 of 1, from 766 to 772: score 1.8, E = 0.89
*->myApGRg<-*
++A+GRg
gi|2101082 766 VFAWGRG 772
DUF1391: domain 1 of 1, from 817 to 830: score 1.8, E = 9.6
*->etldlGnnEslvlG<-*
l +GnnE +lG
gi|2101082 817 SVLACGNNENNKLG 830
Hex_IIIa: domain 1 of 1, from 854 to 868: score 2.2, E = 1.1
*->KVLaIVNaLaenkAI<-*
KV ++V aL +AI
gi|2101082 854 KVPTVVRALTNHRAI 868
DUF429: domain 1 of 1, from 868 to 878: score 0.2, E = 7.5
*->IDLAvkpkRpS<-*
ID Av+p++ S
gi|2101082 868 IDMAVGPHHTS 878
RCC1: domain 4 of 4, from 883 to 934: score 24.7, E = 2.1e-06
CS TSEEEEEEEEEETTSTTSSSTTSCEEETGGGGTHHHHEEEEE--B-S
*->dGrVYslGcFRgenGqLGlgeeveeskGGRqGLERLlvPvlvmLKsr
+G+VY++G+ + +GqLG+g + P +v
gi|2101082 883 PGKVYTFGR--NLEGQLGTGHTKPRD-----------APMEV---KD 913
CS GGSSSSCEEEEEEESSEEEEE
ssslsekVvsvasGgqHtval<-*
s + V a+G+++t++
gi|2101082 914 LSISDKTVTMLACGDMFTAVG 934
Omega_Repress: domain 1 of 1, from 893 to 921: score 1.4, E = 7.9
CS --------------------------EEEE
*->mivGnLGAqKeKRnDtPisAKKDimGDKtv<-*
+ G LG K D P+ K + DKtv
gi|2101082 893 -LEGQLGTGHTKPRDAPMEVKDLSISDKTV 921
RolB_RolC: domain 1 of 1, from 1101 to 1110: score 2.2, E = 2.4
*->eaIVAvGralf<-*
+ +VA+G +lf
gi|2101082 1101 H-VVAHGQNLF 1110
NUDE_C: domain 1 of 1, from 1141 to 1151: score 0.5, E = 4.3
*->PerfqahSRakS<-*
P+r++ hS a S
gi|2101082 1141 PPRNLHHS-ASS 1151
TPD52: domain 1 of 1, from 1197 to 1220: score 5.6, E = 0.29
*->dedgLlvtdplvEtkedtnesssa<-*
++ g+ d+l+Et+++ n+s+ +
gi|2101082 1197 EDGGVTDDDALTETEASGNDSIVS 1220
DUF2205: domain 1 of 1, from 1306 to 1321: score 2.2, E = 4.2
*->aSsvfqStspkikkkK<-*
aS+v+ S+ ++ + +K
gi|2101082 1306 ASEVTKSSEGNHQARK 1321
YDG_SRA: domain 1 of 1, from 1347 to 1357: score 0.7, E = 8.6
*->ekriGevPGVe<-*
kr+G+ PGV+
gi|2101082 1347 MKRVGPMPGVQ 1357
2_5_RNA_ligase: domain 1 of 1, from 1350 to 1366: score 1.6, E = 9.4
CS EE.THHHHHHHHHHHHH
*->igppeeiaeeLarlqae<-*
+gp +++++ L+rl+a+
gi|2101082 1350 VGPMPGVQRPLNRLRAG 1366
Prefoldin: domain 1 of 1, from 1385 to 1439: score 3.0, E = 4
CS ETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
*->GagyyvEksleeAieildkrieelekqlekleeelekLrdqittlea
G+g +v+k + + +++l +e l++ + ee+lek +++++ ++
gi|2101082 1385 GLGKSVAKPIYKTKDTLITEVERLKEEKQRAEEQLEKVQETYKAQQQ 1431
CS HHHHHHXX
nlqqvqqk<-*
+l+q qq+
gi|2101082 1432 KLEQEQQQ 1439
Prefoldin_2: domain 1 of 1, from 1396 to 1433: score 5.5, E = 0.97
CS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTS--
*->erketlekeiktLekqleklekeleelkeelqkllgqa<-*
+ k+tl e+++L++++++ e++le+ +e+ ++++++
gi|2101082 1396 KTKDTLITEVERLKEEKQRAEEQLEKVQETYKAQQQKL 1433
NadA: domain 1 of 1, from 1401 to 1415: score 0.7, E = 6.4
CS HHHHHHHHHHHHT..E
*->LveeIrrLkkErNSRA<-*
L++e+ rLk+E+ RA
gi|2101082 1401 LITEVERLKEEKQ-RA 1415
SpoOE-like: domain 1 of 1, from 1447 to 1459: score 3.9, E = 3.9
*->kLlkqIEkKRkeL<-*
kL+++IE +R+eL
gi|2101082 1447 KLQEEIEILRQEL 1459
CDC73: domain 1 of 1, from 1455 to 1520: score -0.3, E = 9.4
*->trtevlisnktlfeeldiiaslqsaslreeigreekpvpvGptkkpe
r e+ i+++ l e +i slq++ r +++ + + ++
gi|2101082 1455 LRQELTIQSNALKENQNIMMSLQDQLVRVQ-SEQLRANAR-EKRAAS 1499
dervdleskqreakynryaqerf<-*
++ + s++ k+ r+ q f
gi|2101082 1500 ARSQPISSPL--KKPERVRQAQF 1520
Ykof: domain 1 of 1, from 1550 to 1563: score 1.5, E = 6.7
CS EEEEEEEEES-TTS
*->vtLdvTlSancPgd<-*
++ +v +Sa cP++
gi|2101082 1550 YIFTVCVSAACPSQ 1563
TNFR_c6: domain 1 of 4, from 1560 to 1593: score 18.3, E = 0.00017
CS CCTTTEEEETSSSSSEEEEESBTTGGTEEEEE-SBTTB--EE
*->CeegvtYtdenhvpqClsCskCepemGqvlvspCtatqnTvC<-*
C+ +Y +++ C Cs C+p G++++ pC T C
gi|2101082 1560 CPSQ-HYDSSG--A-C--CSQCPP--GEGVTTPCSDGNGTGC 1593
Pacifastin_I: domain 1 of 1, from 1595 to 1602: score 3.8, E = 5
CS ---TT-EE
*->eCtPGsrw<-*
+C+PG+++
gi|2101082 1595 ACVPGQTF 1602
TNFR_c6: domain 2 of 4, from 1596 to 1636: score 32.6, E = 1e-08
CS CCTTTEEEE TSSSSSEEEEESBTTGGTEEEEE-SBTTB--EE
*->CeegvtYtd..enhvpqClsCskCepemGqvlvspCtatqnTvC<-*
C +g+t++ +++++ +qCl C+ C + ++vspC++t++TvC
gi|2101082 1596 CVPGQTFSNsrSHT-EQCLDCTGCGA--NMKVVSPCNRTHDTVC 1636
CBM_14: domain 1 of 1, from 1637 to 1651: score 3.7, E = 1.7
CS --GGG-EEETTTTEE
*->tCpaGlvFnpalgiC<-*
+C+a+ ++++++ +C
gi|2101082 1637 ECSADFYWDEETSRC 1651
TNFR_c6: domain 3 of 4, from 1638 to 1675: score 33.7, E = 4.7e-09
CS CCTTTEEEE TSSSSSEEEEESBTTGGTEEEEE-SBTTB--EE
*->CeegvtYtd.enhvpqClsCskCepemGqvlvspCtatqnTvC<-*
C+ + +Y+d+e ++C++C+ C+p G+++v+ C + q+ C
gi|2101082 1638 CSAD-FYWDeET--SRCERCQICPP--GFGAVEACSPRQDSGC 1675
Haemat_rec_S_F2: domain 1 of 1, from 1642 to 1654: score 2.4, E = 5
*->YywyeglekvleC<-*
+yw+e++++ ++C
gi|2101082 1642 FYWDEETSRCERC 1654
NCD3G: domain 1 of 1, from 1675 to 1698: score 5.9, E = 0.32
*->CipCpegeisntt.DsttCtpCpe<-*
C+ Cp ++s+ ++ s +C+ C++
gi|2101082 1675 CVACPNMTYSDVDsPSAQCVACTL 1698
TNFR_c6: domain 4 of 4, from 1678 to 1717: score 27.5, E = 3.2e-07
CS CCTTTEEEE TSSSSSEEEEESBTTGGTEEEEE-SBTTB--EE
*->CeegvtYtd..enhvpqClsCskCepemGqvlvspCtatqnTvC<-*
C+ tY+d ++ qC++C++C qv+ + Ct+ ++T C
gi|2101082 1678 CPNM-TYSDvdSPS-AQCVACTLCTD--SQVMLQTCTSISDTIC 1717
ocr: domain 1 of 1, from 1679 to 1686: score 0.6, E = 8.4
CS -----HHHH
*->msnmtYsdv<-*
nmtYsdv
gi|2101082 1679 -PNMTYSDV 1686
Cytochrom_B561: domain 1 of 1, from 1745 to 1778: score 0.9, E = 6
*->evlsdflgvltilttilvvltviaepwsrekkie<-*
+++++ ++v + + +++vv ++++ + +r k+++
gi|2101082 1745 ASGQNIIPVYCSIMGAVVVGLIVYVAVKRWKTCQ 1778
Herpes_glycop_D: domain 1 of 1, from 1753 to 1785: score 3.5, E = 0.46
CS XXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX
*->vlalligaiivgvvyyilrRrRkeakkyvrlpps<-*
v ++++ga++vg+++y+ +r k + ++ ++s
gi|2101082 1753 VYCSIMGAVVVGLIVYVAVKRWK-TCQKPQGTKS 1785
AzlD: domain 1 of 1, from 1756 to 1773: score 3.0, E = 3.2
*->nllltvlaGmavyalLrl<-*
+++++v++G++vy++
gi|2101082 1756 SIMGAVVVGLIVYVAVKR 1773
DUF347: domain 1 of 1, from 1757 to 1776: score 3.2, E = 5.6
*->lFagvlAvalvvyfalkrtav<-*
++++v v+l+vy a+kr
gi|2101082 1757 IMGAVV-VGLIVYVAVKRWKT 1776
Chordopox_A13L: domain 1 of 1, from 1760 to 1781: score 3.1, E = 4.1
*->VvVivlIvYGiYNKkktTqnrn<-*
+vV++lIvY + kt q ++
gi|2101082 1760 AVVVGLIVYVAVKRWKTCQKPQ 1781
Duffy_binding: domain 1 of 1, from 1777 to 1806: score 2.6, E = 1.6
*->Cnk...kknypkWnCnknkkkknknkGaCm<-*
C k+++ k++p++++ +k++n+ G+C+
gi|2101082 1777 CQKpqgTKSGPQGTDVEAQKNQNNDSGVCV 1806
Death: domain 1 of 1, from 1841 to 1908: score 43.2, E = 1.1e-11
CS CHHHHHHHCC--HHHHHHHHHHHTTC.HHHHHHHHHHHHHHHHTCCH
*->dWkeLArkLglseneIdeiesdenpgdlrsptyeLLrlWeqrhGkna
+W++LA++Lg++ + Ide+e+ n ++ ++++L W+ + +na
gi|2101082 1841 NWRHLASELGYDIAAIDEFEQ-GN-NNGPGAAKAFLVHWSRM--ENA 1883
CS CHHHHHHHHHHCTHHHHHHHHHHHC
tvgtLleaLrklgrrdaaellesal<-*
tv++L++aLr++gr d++ ll++
gi|2101082 1884 TVDNLCQALRAIGRQDVIGLLQECN 1908
DegT_DnrJ_EryC1: domain 1 of 1, from 1876 to 1893: score 0.8, E = 4.8
CS --TT--HHHHHHHHHHHH
*->lypgltdeevdrVaeavr<-*
+++ + ++ vd ++a+r
gi|2101082 1876 HWSRMENATVDNLCQALR 1893
RUN: domain 1 of 1, from 1887 to 1895: score 2.3, E = 2.9
*->tLCpaleAl<-*
+LC+al+A+
gi|2101082 1887 NLCQALRAI 1895
DUF1819: domain 1 of 1, from 1892 to 1901: score 0.4, E = 9.4
*->LkRlGeqdvl<-*
L+++G+qdv+
gi|2101082 1892 LRAIGRQDVI 1901
//