hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 33600921.fa
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Query sequence: gi|33600921|ref|NP_888481.1|
Accession: [none]
Description: adhesin [Bordetella bronchiseptica RB50]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Fil_haemagg Haemagluttinin repeat 155.3 4.6e-44 15
Haemagg_act haemagglutination activity domain 116.0 3.1e-33 1
Strep_SA_rep Streptococcal surface antigen repeat 9.2 0.13 2
DUF2190 Uncharacterized conserved protein (DU 7.0 0.17 1
RHS_repeat RHS Repeat 8.2 0.18 2
CbbQ_C CbbQ/NirQ/NorQ C-terminal 7.4 0.18 2
P_gingi_FimA Porphyromonas gingivalis major fimbri 3.1 0.2 1
HutD HutD 6.1 0.22 2
HupH_C HupH hydrogenase expression protein, 5.1 0.24 1
DUF2604 Protein of Unknown function (DUF2604) 5.2 0.39 1
WWbp WW-domain ligand protein 4.1 0.42 1
DUF2600 Protein of unknown function (DUF2600) 4.1 0.45 1
DUF490 Family of unknown function (DUF490) 4.1 0.61 1
Pentapeptide Pentapeptide repeats (8 copies) 6.4 0.87 1
Phage_Capsid_P3 P3 major capsid protein 2.0 0.98 1
CDC48_N Cell division protein 48 (CDC48), N-t 4.4 1.2 1
HMG_box HMG (high mobility group) box 5.0 1.4 1
AHS2 Allophanate hydrolase subunit 2 2.4 1.4 1
Enolase_N Enolase, N-terminal domain 3.2 1.5 1
GlcNAc_2-epim N-acylglucosamine 2-epimerase (GlcNAc 1.5 1.6 1
DUF541 Protein of unknown function (DUF541) 3.6 1.6 1
DPBB_1 Rare lipoprotein A (RlpA)-like double 4.1 1.8 1
COLFI Fibrillar collagen C-terminal domain 0.1 2.1 1
MmgE_PrpD MmgE/PrpD family 2.1 2.3 1
AIRS AIR synthase related protein, N-termi 2.8 2.3 2
Acylphosphatase Acylphosphatase 4.3 2.3 1
Ery_res_leader1 Erythromycin resistance leader peptid 5.8 2.6 1
Nrf1_activ_bdg Nrf1 activator activation site bindin 3.3 2.9 1
DUF1643 Protein of unknown function (DUF1643) 0.2 3 1
UPF0164 Uncharacterised protein family (UPF01 1.0 3.3 1
PseudoU_synth_1 tRNA pseudouridine synthase 2.0 3.4 1
IATP Mitochondrial ATPase inhibitor, IATP 3.7 3.5 1
Treacle Treacher Collins syndrome protein Tre -0.2 3.5 1
LEA_1 Late embryogenesis abundant (LEA) gro 3.6 3.7 1
SPO11_like SPO11 homologue 2.7 3.9 1
DUF1840 Domain of unknown function (DUF1840) 2.2 3.9 1
PAD_M Protein-arginine deiminase (PAD) midd 1.1 4 1
Alpha-amyl_C Alpha-amylase, C terminal 4.0 4 1
HSP70 Hsp70 protein 0.6 4 1
Type_III_YscP Type III secretion system (type_III_ 1.9 4.1 1
AD Anticodon-binding domain 3.1 4.2 1
HNF-1A_C Hepatocyte nuclear factor 1 (HNF-1), 1.8 4.4 1
Orexin Prepro-orexin 0.8 4.8 1
GpcrRhopsn4 Rhodopsin-like GPCR transmembrane dom 1.9 5 1
LolB Outer membrane lipoprotein LolB 1.7 5.1 1
FlgD Flagellar hook capping protein 1.5 5.1 1
PDCD9 Mitochondrial 28S ribosomal protein S -0.9 5.1 1
DUF2398 Protein of unknown function (DUF2398) -0.2 5.2 1
DUF1885 Domain of unknown function (DUF1885) 1.3 5.2 1
PACT_coil_coil Pericentrin-AKAP-450 domain of centro 2.6 5.2 1
BtpA BtpA family 0.8 5.3 1
Entericidin Entericidin EcnA/B family 3.6 5.4 1
Nairovirus_M Nairovirus M polyprotein-like -1.9 5.5 1
TraS Plasmid conjugative transfer entry ex -0.0 5.5 1
ATP-synt_ab ATP synthase alpha/beta family, nucle 0.9 5.5 1
BSP_II Bone sialoprotein II (BSP-II) -1.0 5.7 1
Dala_Dala_lig_C D-ala D-ala ligase C-terminus 1.5 6.1 1
DUF1098 Protein of unknown function (DUF1098) 2.8 6.1 1
DUF1109 Protein of unknown function (DUF1109) 0.1 6.3 1
FbpA Fibronectin-binding protein A N-termi -0.3 6.5 1
Toxin_33 Waglerin family 3.4 6.6 1
Ery_res_leader2 Erythromycin resistance leader peptid 3.2 6.7 1
DUF2300 Predicted secreted protein (DUF2300) 1.1 6.9 1
Peptidase_M22 Glycoprotease family 0.1 6.9 1
Transposase_20 Transposase IS116/IS110/IS902 family 2.1 7.1 1
Sigma70_r2 Sigma-70 region 2 2.7 7.4 1
DUF992 Protein of unknown function (DUF992) 1.7 7.7 1
DCD 2'-deoxycytidine 5'-triphosphate deam -1.1 7.8 1
YscO Type III secretion protein YscO 1.2 7.9 1
ATP-grasp_2 ATP-grasp domain -0.4 8.3 1
Big_1 Bacterial Ig-like domain (group 1) 0.7 8.3 1
YopE Yersinia virulence determinant (YopE) 2.0 8.4 1
DUF1205 Protein of unknown function (DUF1205) 0.1 8.4 1
Glyco_hydro_70 Glycosyl hydrolase family 70 -1.4 8.5 1
CagZ CagZ -1.1 8.6 1
DUF917 Protein of unknown function (DUF917) -0.1 8.8 1
Flavi_M Flavivirus envelope glycoprotein M 1.2 8.8 1
Phage-MuB_C Mu B transposition protein, C termina 2.0 9 1
Carot_N Orange carotenoid protein, N-terminal 0.6 9.1 1
Adeno_PIX Adenovirus hexon-associated protein ( 1.0 9.2 1
HTH_DeoR DeoR-like helix-turn-helix domain 2.1 9.3 1
Autoind_synth Autoinducer synthetase 0.3 9.3 1
DUF500 Family of unknown function (DUF500) 1.2 9.4 1
Abhydrolase_1 alpha/beta hydrolase fold 0.3 9.4 1
FERM_C FERM C-terminal PH-like domain 0.9 9.5 1
DUF547 Protein of unknown function, DUF547 1.0 9.6 1
Head_binding Head binding -0.0 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF992 1/1 58 75 .. 1 18 [. 1.7 7.7
Haemagg_act 1/1 69 202 .. 1 134 [. 116.0 3.1e-33
Orexin 1/1 70 84 .. 117 131 .] 0.8 4.8
COLFI 1/1 76 89 .. 1 15 [. 0.1 2.1
Dala_Dala_lig_C 1/1 224 238 .. 210 224 .] 1.5 6.1
Fil_haemagg 1/15 256 337 .. 1 75 [] 28.6 1.6e-07
DUF1098 1/1 266 290 .. 1 25 [. 2.8 6.1
Entericidin 1/1 284 293 .. 34 43 .] 3.6 5.4
DUF2190 1/1 345 367 .. 73 97 .. 7.0 0.17
Fil_haemagg 2/15 346 405 .. 1 75 [] 3.8 2.2
Fil_haemagg 3/15 415 475 .. 1 75 [] 5.2 0.92
ATP-synt_ab 1/1 461 470 .. 202 211 .] 0.9 5.5
P_gingi_FimA 1/1 501 520 .. 1 21 [. 3.1 0.2
Fil_haemagg 4/15 524 547 .. 25 48 .. 1.7 9.1
Fil_haemagg 5/15 548 629 .. 1 75 [] 6.3 0.43
Phage-MuB_C 1/1 591 609 .. 46 63 .. 2.0 9
Fil_haemagg 6/15 633 692 .. 1 75 [] 13.6 0.0034
Phage_Capsid_P3 1/1 649 677 .. 366 394 .] 2.0 0.98
Big_1 1/1 673 700 .. 78 106 .] 0.7 8.3
Fil_haemagg 7/15 695 766 .. 1 75 [] 17.5 0.00025
RHS_repeat 1/2 709 723 .. 25 44 .] 1.3 17
DCD 1/1 730 762 .. 1 33 [. -1.1 7.8
Fil_haemagg 8/15 777 833 .. 1 75 [] 13.3 0.0043
YopE 1/1 797 806 .. 61 70 .] 2.0 8.4
DUF1840 1/1 816 831 .. 8 23 .. 2.2 3.9
Fil_haemagg 9/15 838 892 .. 1 75 [] 8.1 0.13
Fil_haemagg 10/15 900 950 .. 1 75 [] 19.5 7e-05
Fil_haemagg 11/15 953 980 .. 1 33 [. 0.9 16
DUF500 1/1 961 977 .. 26 42 .. 1.2 9.4
DUF490 1/1 962 992 .. 1 39 [. 4.1 0.61
PAD_M 1/1 984 991 .. 1 8 [. 1.1 4
Nrf1_activ_bdg 1/1 995 1010 .. 103 118 .] 3.3 2.9
Fil_haemagg 12/15 996 1053 .. 1 75 [] 22.4 1e-05
HutD 1/2 1033 1061 .. 168 200 .] 4.9 0.46
Ery_res_leader1 1/1 1056 1069 .. 1 17 [] 5.8 2.6
Fil_haemagg 13/15 1058 1105 .. 1 71 [. 4.4 1.6
CDC48_N 1/1 1082 1100 .. 1 19 [. 4.4 1.2
Fil_haemagg 14/15 1163 1203 .. 34 75 .] 6.2 0.47
BSP_II 1/1 1220 1232 .. 1 13 [. -1.0 5.7
Peptidase_M22 1/1 1222 1235 .. 296 308 .] 0.1 6.9
Ery_res_leader2 1/1 1252 1258 .. 8 14 .] 3.2 6.7
PDCD9 1/1 1255 1269 .. 497 509 .] -0.9 5.1
DUF2300 1/1 1264 1281 .. 129 146 .] 1.1 6.9
Nairovirus_M 1/1 1308 1318 .. 1 11 [. -1.9 5.5
HMG_box 1/1 1322 1338 .. 53 69 .] 5.0 1.4
Strep_SA_rep 1/2 1322 1345 .. 1 25 [] 5.7 1.3
HSP70 1/1 1323 1392 .. 545 619 .] 0.6 4
PseudoU_synth_1 1/1 1326 1366 .. 72 125 .] 2.0 3.4
MmgE_PrpD 1/1 1328 1357 .. 1 33 [. 2.1 2.3
Transposase_20 1/1 1351 1365 .. 73 88 .] 2.1 7.1
AD 1/1 1360 1393 .. 9 42 .. 3.1 4.2
Adeno_PIX 1/1 1360 1386 .. 89 115 .] 1.0 9.2
Strep_SA_rep 2/2 1363 1387 .. 1 25 [] 3.6 5.3
CbbQ_C 1/2 1377 1391 .. 72 86 .] 0.2 23
Enolase_N 1/1 1381 1402 .. 1 22 [. 3.2 1.5
Abhydrolase_1 1/1 1448 1458 .. 1 11 [. 0.3 9.4
Head_binding 1/1 1609 1625 .. 96 114 .] -0.0 9.9
DUF547 1/1 1687 1697 .. 143 153 .] 1.0 9.6
IATP 1/1 1720 1734 .. 14 28 .. 3.7 3.5
FlgD 1/1 1735 1775 .. 97 155 .] 1.5 5.1
CbbQ_C 2/2 1794 1810 .. 70 86 .] 7.3 0.21
RHS_repeat 2/2 1823 1836 .. 1 14 [. 6.9 0.41
Pentapeptide 1/1 1912 1926 .. 26 40 .] 6.4 0.87
CagZ 1/1 1963 1976 .. 186 199 .] -1.1 8.6
DUF2604 1/1 1971 1981 .. 66 76 .] 5.2 0.39
Glyco_hydro_70 1/1 2055 2066 .. 457 468 .. -1.4 8.5
HutD 2/2 2124 2158 .. 164 200 .] 1.1 5.7
DUF541 1/1 2137 2159 .. 1 23 [. 3.6 1.6
Fil_haemagg 15/15 2178 2220 .. 1 45 [. 3.9 2.1
YscO 1/1 2209 2236 .. 133 160 .] 1.2 7.9
GpcrRhopsn4 1/1 2230 2252 .. 250 273 .] 1.9 5
LEA_1 1/1 2291 2315 .. 50 73 .] 3.6 3.7
WWbp 1/1 2321 2332 .. 1 12 [. 4.1 0.42
ATP-grasp_2 1/1 2390 2398 .. 131 139 .. -0.4 8.3
TraS 1/1 2394 2413 .. 145 164 .] -0.0 5.5
GlcNAc_2-epim 1/1 2468 2494 .. 1 25 [. 1.5 1.6
Toxin_33 1/1 2510 2528 .. 1 19 [. 3.4 6.6
Sigma70_r2 1/1 2571 2594 .. 48 71 .] 2.7 7.4
DUF1643 1/1 2616 2621 .. 147 152 .] 0.2 3
FbpA 1/1 2648 2666 .. 1 19 [. -0.3 6.5
DUF1109 1/1 2695 2706 .. 1 13 [. 0.1 6.3
Flavi_M 1/1 2778 2784 .. 69 75 .] 1.2 8.8
BtpA 1/1 2826 2844 .. 258 276 .] 0.8 5.3
PACT_coil_coil 1/1 2830 2843 .. 75 94 .] 2.6 5.2
AIRS 1/2 3049 3058 .. 115 124 .] 0.0 16
SPO11_like 1/1 3213 3227 .. 29 43 .] 2.7 3.9
FERM_C 1/1 3322 3332 .. 86 96 .] 0.9 9.5
DUF2600 1/1 3385 3399 .. 1 15 [. 4.1 0.45
UPF0164 1/1 3427 3456 .. 313 345 .] 1.0 3.3
DPBB_1 1/1 3445 3462 .. 1 18 [. 4.1 1.8
Treacle 1/1 3458 3473 .. 495 510 .] -0.2 3.5
Acylphosphatase 1/1 3494 3521 .. 50 76 .. 4.3 2.3
DUF2398 1/1 3535 3548 .. 1 14 [. -0.2 5.2
Autoind_synth 1/1 3556 3571 .. 172 187 .] 0.3 9.3
DUF1885 1/1 3641 3646 .. 138 143 .] 1.3 5.2
AHS2 1/1 3745 3764 .. 273 292 .] 2.4 1.4
HupH_C 1/1 3752 3764 .. 111 123 .] 5.1 0.24
HTH_DeoR 1/1 3755 3767 .. 1 13 [. 2.1 9.3
LolB 1/1 3801 3807 .. 163 169 .] 1.7 5.1
AIRS 2/2 3897 3907 .. 114 124 .] 2.7 2.3
HNF-1A_C 1/1 3912 3919 .. 83 90 .] 1.8 4.4
Type_III_YscP 1/1 3983 4002 .. 1 26 [. 1.9 4.1
DUF1205 1/1 4048 4055 .. 104 111 .] 0.1 8.4
Alpha-amyl_C 1/1 4067 4073 .. 62 68 .] 4.0 4
DUF917 1/1 4092 4102 .. 1 11 [. -0.1 8.8
Carot_N 1/1 4202 4212 .. 155 165 .] 0.6 9.1
Alignments of top-scoring domains:
DUF992: domain 1 of 1, from 58 to 75: score 1.7, E = 7.7
*->aaaaalaapaaaaaaang<-*
a+++a++apa aaaaa+g
gi|3360092 58 AVTLAVLAPAGAAAAAGG 75
Haemagg_act: domain 1 of 1, from 69 to 202: score 116.0, E = 3.1e-33
CS X---EE-TT-EEE-... -TTS--EEE-----TTSEEEEEEEE--B-
*->aqslpdgglvtngtvti.qatgvpitggtipqtsgnlfisfssFnVg
a+++ g ++++ t ++ +gvp++ +++p +g++++++++FnV
gi|3360092 69 AAAAAGGIAPQGATQVApARNGVPVIQIAAPDATGISHNRYTEFNVR 115
CS TTEEEEEE-SS EEETTTEEE---TT-.SS--SEEEEEE-SS--EEEEEE
qggtvlFnatq.gqSqLgGnltgNpnLapgaasnIlNRVTGgnaSqIqGl
q g+vl+n+t +g S L+G + gNp L g a++IlN+VTG ++ + G+
gi|3360092 116 QPGVVLNNSTAeGVSALAGRISGNPGL-RGPARAILNEVTGVSPTTLEGA 164
CS EEEEE.S-EEEEEE-TT-EEEEEEEEESEEEEEEE-SEE
levlGganAnVfLaNPNGIifgggAfiNvgglfvtTgai<-*
lev+G A+V aNPNG + +g ++iN++gl+++Tg +
gi|3360092 165 LEVFG-PAADVLVANPNGLTANGLSTINIRGLTLSTGRP 202
Orexin: domain 1 of 1, from 70 to 84: score 0.8, E = 4.8
*->aAaAsalAPrGrsrv<-*
aAaA +AP+G +v
gi|3360092 70 AAAAGGIAPQGATQV 84
COLFI: domain 1 of 1, from 76 to 89: score 0.1, E = 2.1
*->lksPeGksrknPARt<-*
++P+G ++ +PAR+
gi|3360092 76 -IAPQGATQVAPARN 89
Dala_Dala_lig_C: domain 1 of 1, from 224 to 238: score 1.5, E = 6.1
CS CTT-HHHHHHHHHHC
*->aaGlsyedLidqLie<-*
+aGlsy dL+++ +
gi|3360092 224 TAGLSYFDLVARTVA 238
Fil_haemagg: domain 1 of 15, from 256 to 337: score 28.6, E = 1.6e-07
CS EEESSEEEETT TT--EE-SEE
*->vaaGaltlnaa..........................alggldlnng
v+aGa++++ +++++ ++++++ ++ + ++ +++a+g+++ +++
gi|3360092 256 VVAGANRYDYGrrtrlqptgrpaaapdasaghaidgsAAGAMYGRHI 302
CS EEEE-STT-EEEE-S-EEESSE...................EEEEESS-E
gtlsagggltltaagllnnggtliaggdlllaagalrnggdltltaaGdL
++s+++gl+++ +gl ++g ++++aaG +
gi|3360092 303 TLVSSDAGLGVRHRGLVSAAGH-------------------IAIDAAGGV 333
CS EEEE
dnsg<-*
++++
gi|3360092 334 SVQA 337
DUF1098: domain 1 of 1, from 266 to 290: score 2.8, E = 6.1
*->rrnrrrrrptrdvsfdpvdnvnein<-*
+r+ r +++ r+ + ++ ++++i+
gi|3360092 266 GRRTRLQPTGRPAAAPDASAGHAID 290
Entericidin: domain 1 of 1, from 284 to 293: score 3.6, E = 5.4
*->saGeAiedaA<-*
saG+Ai+++A
gi|3360092 284 SAGHAIDGSA 293
DUF2190: domain 1 of 1, from 345 to 367: score 7.0, E = 0.17
*->DdTngekvvtttAtgNtliGvAwaa<-*
D T+ + +t+ A+g++liG+++a+
gi|3360092 345 DGTA--GSATIRAGGDALIGSVIAF 367
Fil_haemagg: domain 2 of 15, from 346 to 405: score 3.8, E = 2.2
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EE ESSE...
*->vaaGaltlnaaalggldlnnggtlsagggltltaaglln.nggtlia
+aG+ t++a+ +d+ g ++ gg++ ++aa+ +g+l a
gi|3360092 346 GTAGSATIRAG----GDALIGSVIAFGGDIEVRAAAGRIaTHGALNA 388
CS ................EEEEESS-EEEEE
ggdlllaagalrnggdltltaaGdLdnsg<-*
+ + ++l a+++L ++g
gi|3360092 389 PRG-----------R-VRLQAGDALAVHG 405
Fil_haemagg: domain 3 of 15, from 415 to 475: score 5.2, E = 0.92
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++ G+ +++a+ + +++ g++l a+++ +++ ia+
gi|3360092 415 ATRGDASIAAD-----------LHATRDGVSLAARNATLAHARVIAT 450
CS .............. .EEEEESS-EEEEE
gdlllaagalrngg....dltltaaGdLdnsg<-*
+++++++++++ ++ +G+L+++g
gi|3360092 451 PP-------AAQARpstpAIDIALSGTLTLRG 475
ATP-synt_ab: domain 1 of 1, from 461 to 470: score 0.9, E = 5.5
CS S-B-TTT-B-
RF xxxxxxxxxx
*->PAIDvllSvS<-*
PAID+ lS++
gi|3360092 461 PAIDIALSGT 470
P_gingi_FimA: domain 1 of 1, from 501 to 520: score 3.1, E = 0.2
*->vlktSnpnRafePnGlgdddA<-*
++ t p+Ra+ Pn l+ +dA
gi|3360092 501 IVDTRQPQRAV-PNALLASDA 520
Fil_haemagg: domain 4 of 15, from 524 to 547: score 1.7, E = 9.1
CS E-STT-EEEE-S-EEESSE.....
*->sagggltltaagllnnggtliagg<-*
+ag+ ++++aagl n gg+++++g
gi|3360092 524 AAGQPISIRAAGLRNEGGAIDSTG 547
Fil_haemagg: domain 5 of 15, from 548 to 629: score 6.3, E = 0.43
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
+ G l+++ + + n g +++ g+l +t g+l n l+++
gi|3360092 548 TGQGHIGLRIG----GPAVNLGYIATHGTLEATVDGTLEN-RMLLSA 589
CS .............. .EEEEESS-EEEEE
gdlllaagalrngg............dltltaaGdLdnsg<-*
++l++a+ l+n + ++++ ++++l l+ + ++dn+g
gi|3360092 590 AALRVATHDLSNHAamtasgpdagtpALDLSVQHRVDNAG 629
Phage-MuB_C: domain 1 of 1, from 591 to 609: score 2.0, E = 9
CS SHHHHHHHH GGGT-TT-T
*->aLRiLtqtL.RlAaMtAkG<-*
aLR+ t+ L++ AaMtA+G
gi|3360092 591 ALRVATHDLsNHAAMTASG 609
Fil_haemagg: domain 6 of 15, from 633 to 692: score 13.6, E = 0.0034
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
+a Gal+l+ + ++ + n+ + + g + aa+ l+n+gtl+++
gi|3360092 633 AARGALRLRGG-AELSIVNQPAGFMLAHG-QDIAAARLANAGTLSST 677
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
++ +tlt aGdL+nsg
gi|3360092 678 AA-------------GTLTLAGDLENSG 692
Phage_Capsid_P3: domain 1 of 1, from 649 to 677: score 2.0, E = 0.98
CS -TTEEEEEEEEEEEESB-----------X
*->vnqnARLLmGYEYFtsRtELvnAGtistt<-*
vnq A ++ + L nAGt+s t
gi|3360092 649 VNQPAGFMLAHGQDIAAARLANAGTLSST 677
Big_1: domain 1 of 1, from 673 to 700: score 0.7, E = 8.3
CS EEE-SS-EEEEEEEEET.TECEEEEEEEE
*->tLTstkaGtytVtAslanngatsvdaktV<-*
tL+st aGt t +l+ n+++ + a ++
gi|3360092 673 TLSSTAAGTLTLAGDLE-NSGVLQSAHAL 700
Fil_haemagg: domain 7 of 15, from 695 to 766: score 17.5, E = 0.00025
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++a+al+++a + + ++ +t g+gltl a + l+ +g ++++
gi|3360092 695 QSAHALRVQAR--RIASRGRLATATDGAGLTLAADENLTLAGRTSSA 739
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
g+ll+ aga+ ++ +++ta+ dL++++
gi|3360092 740 GALLARAGAALVNE-GIVTARRDLSWRA 766
RHS_repeat: domain 1 of 2, from 709 to 723: score 1.3, E = 17
*->aagrltaltlttstdasGtt<-*
++grl ++ td++G t
gi|3360092 709 SRGRLATA-----TDGAGLT 723
DCD: domain 1 of 1, from 730 to 762: score -1.1, E = 7.8
*->lsmTtdadsaGILpdraIeaLiaeekiksaadf<-*
l++ + saG L ra +aL+ e+ ++ d+
gi|3360092 730 LTLAGRTSSAGALLARAGAALVNEGIVTARRDL 762
Fil_haemagg: domain 8 of 15, from 777 to 833: score 13.3, E = 0.0043
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
v+a +++ +a+ ++ g++++ +l+l aa+++ +g+l a
gi|3360092 777 VVARSVDMRAG----QGFDHRGAIGSVTDLVLKAARIDS-AGVLRAN 818
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
+d + +a++++++++
gi|3360092 819 QD-------------IDMHADDAMRLTA 833
YopE: domain 1 of 1, from 797 to 806: score 2.0, E = 8.4
*->GaaselVasA<-*
G++++lV++A
gi|3360092 797 GSVTDLVLKA 806
DUF1840: domain 1 of 1, from 816 to 831: score 2.2, E = 3.9
*->kaaaDviMlgDlArqL<-*
+a +D+ M++D+A++L
gi|3360092 816 RANQDIDMHADDAMRL 831
Fil_haemagg: domain 9 of 15, from 838 to 892: score 8.1, E = 0.13
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
a+ +l l+a+ +l ++g +ag++lt+ta++l n+g +a
gi|3360092 838 LAGRDLALAAD-----QLEQSGMAQAGRTLTATAGALENDGLLDAAD 879
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
+ l ++ ++ n+g
gi|3360092 880 ---------------AKLRTTRAFVNRG 892
Fil_haemagg: domain 10 of 15, from 900 to 950: score 19.5, E = 7e-05
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
+a G + +n+g l ag+ l+l+aag l n+g+ +a+
gi|3360092 900 QAQGP-----------QIRNAGVLRAGALLALQAAGRLENTGGMAAS 935
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
g l+++aaG + nsg
gi|3360092 936 GS-------------LSIAAAGPFANSG 950
Fil_haemagg: domain 11 of 15, from 953 to 980: score 0.9, E = 16
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEE
*->vaaGaltlnaaalggldlnnggtlsagggltlt<-*
a G+ + + + + +n+g++s gg+l+l+
gi|3360092 953 GANGDASFALS-----SFANTGSISVGGDLALR 980
DUF500: domain 1 of 1, from 961 to 977: score 1.2, E = 9.4
*->AVdaFaelGniTLGGnl<-*
A+ +Fa+ G+i+ GG+l
gi|3360092 961 ALSSFANTGSISVGGDL 977
DUF490: domain 1 of 1, from 962 to 992: score 4.1, E = 0.61
*->ldglsatglgggGtltasGtldlaadlpadLtikgvadn<-*
l+++++t G++++ G+l l + ++++Lt+++ d+
gi|3360092 962 LSSFANT-----GSISVGGDLAL-RLPDVELTLDA--DH 992
PAD_M: domain 1 of 1, from 984 to 991: score 1.1, E = 4
CS EEEEEE--
*->VdISLdvD<-*
V+++Ld+D
gi|3360092 984 VELTLDAD 991
Nrf1_activ_bdg: domain 1 of 1, from 995 to 1010: score 3.3, E = 2.9
*->avgsegqavqVvtLqd<-*
+v++ ++++qV++L++
gi|3360092 995 PVSQGTTLLQVASLDN 1010
Fil_haemagg: domain 12 of 15, from 996 to 1053: score 22.4, E = 1e-05
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
v+ G+ l++a +l+n + + g l+++a+g++ n++tl+ag
gi|3360092 996 VSQGTTLLQVA-----SLDNRARSETPGRLSVQARGAIRNQDTLAAG 1037
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
++l +aa+d++n++
gi|3360092 1038 QGL------------WLESAANDIENGA 1053
HutD: domain 1 of 2, from 1033 to 1061: score 4.9, E = 0.46
CS EE-TT-EE..EEESEEEE.EEEEE.EEEEEEEE
*->aLeagDtLmvwlegdalllpltgdrgrlllvsl<-*
+L+ag++L wle +a+ g+ g+ll+
gi|3360092 1033 TLAAGQGL--WLESAAND-IENGA-GALLWSGA 1061
Ery_res_leader1: domain 1 of 1, from 1056 to 1069: score 5.8, E = 2.6
*->LrisGaAllhLrLRTdR<-*
L+ sGa LrLR R
gi|3360092 1056 LLWSGAD---LRLRGTR 1069
Fil_haemagg: domain 13 of 15, from 1058 to 1105: score 4.4, E = 1.6
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++ +l+l+ + + ++ ++++ +++g +l+a++ + ng
gi|3360092 1058 WSGADLRLRGT---RIINREAAIIESAAGMVLDARAEIDNGL----- 1096
CS ...............EEEEESS-E
gdlllaagalrnggdltltaaGdL<-*
+++ a+GdL
gi|3360092 1097 ---------------GIIRAGGDL 1105
CDC48_N: domain 1 of 1, from 1082 to 1100: score 4.4, E = 1.2
CS EEEEEEECCS.-HHCCCCC
*->klrvleAdkcpddgrsiar<-*
+ +vl A+ +d+g++i+r
gi|3360092 1082 AGMVLDARAEIDNGLGIIR 1100
Fil_haemagg: domain 14 of 15, from 1163 to 1203: score 6.2, E = 0.47
CS E-S-EEESSE...................EEEEESS-EEEEE
*->aagllnnggtliaggdlllaagalrnggdltltaaGdLdnsg<-*
++++ ++ ++agg+l l+ ga+++ + ++++++G+++ g
gi|3360092 1163 SKEVRLAQSLIQAGGNLHLNQGAQNGKR-ARVSNQGRIEAVG 1203
BSP_II: domain 1 of 1, from 1220 to 1232: score -1.0, E = 5.7
*->fSmknfhRRakae<-*
+S+ ++RRa ae
gi|3360092 1220 LSVDEYLRRALAE 1232
Peptidase_M22: domain 1 of 1, from 1222 to 1235: score 0.1, E = 6.9
*->vl.YLrdnvAeiak<-*
v++YLr++ Ae++
gi|3360092 1222 VDeYLRRALAEPIL 1235
Ery_res_leader2: domain 1 of 1, from 1252 to 1258: score 3.2, E = 6.7
*->RFPtLnq<-*
RFPtL q
gi|3360092 1252 RFPTLYQ 1258
PDCD9: domain 1 of 1, from 1255 to 1269: score -0.9, E = 5.1
*->vLlQLVnFlL..NrP<-*
+L QL+ FlL++N+P
gi|3360092 1255 TLYQLLEFLLsdNAP 1269
DUF2300: domain 1 of 1, from 1264 to 1281: score 1.1, E = 6.9
*->ladltheyrhlgFaghPn<-*
l+d ++ y+++ + +P+
gi|3360092 1264 LSDNAPKYIWGYYRTWPE 1281
Nairovirus_M: domain 1 of 1, from 1308 to 1318: score -1.9, E = 5.5
*->PTVLDRQSRAS<-*
P VLD Q AS
gi|3360092 1308 PPVLDPQAKAS 1318
HMG_box: domain 1 of 1, from 1322 to 1338: score 5.0, E = 1.4
CS HHHHHHHHHHHHTTTSS
*->kAekeKarYekempeYk<-*
+A+++ a+Y+k+++eY
gi|3360092 1322 AAQALVAQYHKDLAEYA 1338
Strep_SA_rep: domain 1 of 2, from 1322 to 1345: score 5.7, E = 1.3
*->adYeakLaqYqadLArvqkanaane<-*
+ +a +aqY +dLA++ a++a++
gi|3360092 1322 -AAQALVAQYHKDLAEYATALEAAQ 1345
HSP70: domain 1 of 1, from 1323 to 1392: score 0.6, E = 4
CS HHHHHHHHHHHHCCC..CCCGCHHHHH...HHHHHHHHHHHHHC
*->aEslvystekslkeeklgdkvpeadkeklekkveeaiewLkeal...
a +lv + +k l+e+ + ++++a+ + +++++a + ++ al+ +
gi|3360092 1323 AQALVAQYHKDLAEY--ATALEAAQRA---EAIRTARQRVDGALrar 1364
CS TSSH...HHHHHHHHHHHHHCHHHHHHHHHH
egeddAekeeikakteeLqkvvqkigekmyq<-*
ge + ++++t e++++v ++++ + +
gi|3360092 1365 YGEK---LAQLETRTPEVDAAVAALAQTIFD 1392
PseudoU_synth_1: domain 1 of 1, from 1326 to 1366: score 2.0, E = 3.4
CS EEES--...-......-HHHHCHHHHHCS-T...TEEEEEEEE.--T
*->fvgpgeltdrdnkndippedikkaLnaklrddladigvltapaegly
+v + ++ ++ +++ aL+a r+ +++ta++ ++
gi|3360092 1326 LVAQYHK---------DLAEYATALEAAQRA----EAIRTARQRVDG 1359
CS T--TTTT
lfharys<-*
+ary
gi|3360092 1360 ALRARYG 1366
MmgE_PrpD: domain 1 of 1, from 1328 to 1357: score 2.1, E = 2.3
CS HHHHHHHHHHHH-----HH....HHHHHHHHHH
*->dsvteqlAdyvasvryssippdvealetakkll<-*
++ ++lA+y++++++ + + ea++ta+ ++
gi|3360092 1328 AQYHKDLAEYATALEAAQR-A--EAIRTARQRV 1357
Transposase_20: domain 1 of 1, from 1351 to 1365: score 2.1, E = 7.1
*->lvalrhvedpgsrafy<-*
++a+++v d++ ra+y
gi|3360092 1351 RTARQRV-DGALRARY 1365
AD: domain 1 of 1, from 1360 to 1393: score 3.1, E = 4.2
*->rvkkrlrkaieeakkkaariGkGVSpEGQeiFda<-*
++++r+ ++++++++ + ++V +++Q iFda
gi|3360092 1360 ALRARYGEKLAQLETRTPEVDAAVAALAQTIFDA 1393
Adeno_PIX: domain 1 of 1, from 1360 to 1386: score 1.0, E = 9.2
*->alrslaedkLtvllaeLeeLsqqLaal<-*
alr+++ +kL++l+++ e+ +++aal
gi|3360092 1360 ALRARYGEKLAQLETRTPEVDAAVAAL 1386
Strep_SA_rep: domain 2 of 2, from 1363 to 1387: score 3.6, E = 5.3
*->adYeakLaqYqadLArvqkanaane<-*
a Y +kLaq ++ +v +a aa
gi|3360092 1363 ARYGEKLAQLETRTPEVDAAVAALA 1387
CbbQ_C: domain 1 of 2, from 1377 to 1391: score 0.2, E = 23
*->pdvreaLmeviaayF<-*
p+v +a ++++++F
gi|3360092 1377 PEVDAAVAALAQTIF 1391
Enolase_N: domain 1 of 1, from 1381 to 1402: score 3.2, E = 1.5
CS EEEEEEEEEE-TTS-EEEEEEE
*->aivkihaRqilDsRGnPtvEvd<-*
a v+ a i+D+R P Ev+
gi|3360092 1381 AAVAALAQTIFDARAKPAAEVE 1402
Abhydrolase_1: domain 1 of 1, from 1448 to 1458: score 0.3, E = 9.4
CS CEEEEECTTTS
*->fdvialDlrGf<-*
++v+++D+rG+
gi|3360092 1448 ATVLGPDWRGP 1458
Head_binding: domain 1 of 1, from 1609 to 1625: score -0.0, E = 9.9
*->dGaqqfYfanvLKYdPdkf<-*
+G+q Yf ++++Y Pd+
gi|3360092 1609 YGSQ--YFFDLIRYRPDRP 1625
DUF547: domain 1 of 1, from 1687 to 1697: score 1.0, E = 9.6
*->eqLdeAareFi<-*
eqL +A+r+F+
gi|3360092 1687 EQLARATRDFV 1697
IATP: domain 1 of 1, from 1720 to 1734: score 3.7, E = 3.5
CS XXXXXXXXXXXXHHH
*->vggggGSiReAGGaF<-*
+++++++ ReAGGa+
gi|3360092 1720 TRTAASATREAGGAL 1734
FlgD: domain 1 of 1, from 1735 to 1775: score 1.5, E = 5.1
*->lvpddgntivyldgggggetGsvsggvevgLpsaAdevtvtikDaaG
+++ + t v d+gg + +e +aA ++ +i+DaaG
gi|3360092 1735 MAS--AGT-VLADTGG--------AAIE--SGNAAFLGKDVILDAAG 1768
qvvnvelVrtid<-*
Vr i+
gi|3360092 1769 GA-----VRLIN 1775
CbbQ_C: domain 2 of 2, from 1794 to 1810: score 7.3, E = 0.21
*->DDpdvreaLmeviaayF<-*
DD++++ +L+++++ay+
gi|3360092 1794 DDIAIQGGLLDAAQAYL 1810
RHS_repeat: domain 2 of 2, from 1823 to 1836: score 6.9, E = 0.41
*->YDanGrLtavtdps<-*
YDa+GrL++ d++
gi|3360092 1823 YDAHGRLVSRHDAR 1836
Pentapeptide: domain 1 of 1, from 1912 to 1926: score 6.4, E = 0.87
CS -B-TT-B-TT-B-TC
*->AnLsgAnLsganLsg<-*
A ++g+ L+ga+Lsg
gi|3360092 1912 ARFQGTTLEGAILSG 1926
CagZ: domain 1 of 1, from 1963 to 1976: score -1.1, E = 8.6
*->ERAKLitqLKLnLE<-*
ERAK + qL L L
gi|3360092 1963 ERAKRVDQLFLRLS 1976
DUF2604: domain 1 of 1, from 1971 to 1981: score 5.2, E = 0.39
*->LFLsLKAGvAG<-*
LFL L AG++G
gi|3360092 1971 LFLRLSAGAGG 1981
Glyco_hydro_70: domain 1 of 1, from 2055 to 2066: score -1.4, E = 8.5
*->RYGKGAmsAsDt<-*
RYG+GA +AsD+
gi|3360092 2055 RYGQGASTASDA 2066
HutD: domain 2 of 2, from 2124 to 2158: score 1.1, E = 5.7
CS ..E EEE-TT-EE..EEESEEEE.EEEEE.EEEEEEEE
*->yae.iaLeagDtLmvwlegdalllpltgdrgrlllvsl<-*
++e+ +++ag+++ ++++g+a++ ++t+d ++l +s
gi|3360092 2124 RQEnSQVHAGQMA-LQMAGEATQ-LATAD-TAALSISA 2158
DUF541: domain 1 of 1, from 2137 to 2159: score 3.6, E = 1.6
*->itVsGegevevaPDlAtislgVe<-*
+++ Ge+++ +++D+A +s++ +
gi|3360092 2137 LQMAGEATQLATADTAALSISAT 2159
Fil_haemagg: domain 15 of 15, from 2178 to 2220: score 3.9, E = 2.1
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE..
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtli<-
+G+l+++a+ ++ + +g + s + l+l+a++++n++++l+
gi|3360092 2178 YFGGNLDIRAT--EQDIDLAGTKFSGADWLALSARRDINARAALS 2220
CS
*
gi|3360092 - -
YscO: domain 1 of 1, from 2209 to 2236: score 1.2, E = 7.9
*->arqeqaeaqaqrqylEElEqEEFrever<-*
ar+ + +++a+ y+E +Eq + ++ +
gi|3360092 2209 ARRDINARAALSRYQESGEQHDLQQHQT 2236
GpcrRhopsn4: domain 1 of 1, from 2230 to 2252: score 1.9, E = 5
*->pywvReKvilggtislqcvAiivl<-*
+++ ++ ++++g +++q++A +++
gi|3360092 2230 DLQ-QHQTVNAGANAMQAAAGVGV 2252
LEA_1: domain 1 of 1, from 2291 to 2315: score 3.6, E = 3.7
*->AKeAqA.eMdlheaKAehaaekesa<-*
A +AqA+ Mdlh a+ a+ ++ +
gi|3360092 2291 ASMAQAtRMDLHVARDLKAISRQDE 2315
WWbp: domain 1 of 1, from 2321 to 2332: score 4.1, E = 0.42
*->pGGGwePslGea<-*
GG+we slG+a
gi|3360092 2321 TGGNWEVSLGAA 2332
ATP-grasp_2: domain 1 of 1, from 2390 to 2398: score -0.4, E = 8.3
CS EESS-SS-H
*->ASseGGvdI<-*
AS +GG+dI
gi|3360092 2390 ASNQGGMDI 2398
TraS: domain 1 of 1, from 2394 to 2413: score -0.0, E = 5.5
*->GGvDsAGntFGsrWqDydDR<-*
GG+D AG Dy D+
gi|3360092 2394 GGMDIAGRIHAEALHDYRDK 2413
GlcNAc_2-epim: domain 1 of 1, from 2468 to 2494: score 1.5, E = 1.6
*->Gf.FerLdad.GqpldadrrrivlqaR<-*
G+ +rL+ d+Gq++ +r++++++aR
gi|3360092 2468 GGvSGRLNTDsGQAVVVQRAERWASAR 2494
Toxin_33: domain 1 of 1, from 2510 to 2528: score 3.4, E = 6.6
*->GGKPDLRPCyPPCHYiPRP<-*
GG P RP +P P P
gi|3360092 2510 GGSPGARPAHPGAAKAPAP 2528
Sigma70_r2: domain 1 of 1, from 2571 to 2594: score 2.7, E = 7.4
CS HHHHHHHHHHHHHHHHCHHTSTTT
*->sfstwLytiarnaiiDalRrrrrr<-*
++ +++ +++ ++++D + ++++
gi|3360092 2571 KPDPYANRVIVQLAQDDVATQAAQ 2594
DUF1643: domain 1 of 1, from 2616 to 2621: score 0.2, E = 3
*->ePcHPL<-*
+P+HPL
gi|3360092 2616 HPVHPL 2621
FbpA: domain 1 of 1, from 2648 to 2666: score -0.3, E = 6.5
*->DGlflhAvveELqetLvgg<-*
DG ++ +v++L+e+L ++
gi|3360092 2648 DGHAVAGIVQQLRERLPPA 2666
DUF1109: domain 1 of 1, from 2695 to 2706: score 0.1, E = 6.3
*->LAadlepvrrrav<-*
LAad ++ +++av
gi|3360092 2695 LAAD-GAQPAPAV 2706
Flavi_M: domain 1 of 1, from 2778 to 2784: score 1.2, E = 8.8
*->LvAPAYa<-*
+vAP+Y+
gi|3360092 2778 AVAPSYS 2784
BtpA: domain 1 of 1, from 2826 to 2844: score 0.8, E = 5.3
*->inNevDieRvskivelake<-*
+ + +++eR ++ +++ak
gi|3360092 2826 FSERISAERIRRVANAAKV 2844
PACT_coil_coil: domain 1 of 1, from 2830 to 2843: score 2.6, E = 5.2
*->iAieRqsltdyMrklankWh<-*
i++eR +r+ an++
gi|3360092 2830 ISAER------IRRVANAAK 2843
AIRS: domain 1 of 2, from 3049 to 3058: score 0.0, E = 16
CS HT-EEEE--E
*->aGvplvGGdT<-*
+Gvpl+GG+
gi|3360092 3049 HGVPLLGGNA 3058
SPO11_like: domain 1 of 1, from 3213 to 3227: score 2.7, E = 3.9
*->GarEtPaGasRlAss<-*
Ga+E PaG Rl s
gi|3360092 3213 GAGEIPAGWLRLPSG 3227
FERM_C: domain 1 of 1, from 3322 to 3332: score 0.9, E = 9.5
CS HHHHHHCT-XX
*->qfylrrrqpdt<-*
qf+++rrq d
gi|3360092 3322 QFHAQRRQGDV 3332
DUF2600: domain 1 of 1, from 3385 to 3399: score 4.1, E = 0.45
*->PaVhreLakWrerAg<-*
P++ r+L+ Wrer+g
gi|3360092 3385 PVSARYLQQWRERSG 3399
UPF0164: domain 1 of 1, from 3427 to 3456: score 1.0, E = 3.3
*->vaFsssvategnasqlvrasaGaEiqilsvrld<-*
v ++s + te a l r +aG +++++ d
gi|3360092 3427 VQLGSDALTETAARRLFRKHAG---NASWYSQD 3456
DPBB_1: domain 1 of 1, from 3445 to 3462: score 4.1, E = 1.8
*->taaGsaslYGndghGrkt<-*
aG+as+Y++d G++t
gi|3360092 3445 KHAGNASWYSQDASGQLT 3462
Treacle: domain 1 of 1, from 3458 to 3473: score -0.2, E = 3.5
*->vGKTsQvRAAlAPAKE<-*
+G QvRA APA
gi|3360092 3458 SGQLTQVRAPAAPATG 3473
Acylphosphatase: domain 1 of 1, from 3494 to 3521: score 4.3, E = 2.3
CS E-H HHHHHHHHHHHH--STT-EEEEEE
*->Gde.aaleeFlewLkkggPPlarVdkve<-*
G+ a+l+++l ++++g P arV+k++
gi|3360092 3494 GNNaAQLARMLPAIRQGLPATARVEKIT 3521
DUF2398: domain 1 of 1, from 3535 to 3548: score -0.2, E = 5.2
*->lRaLLanPLitrtg<-*
lR LL+ +Lit +g
gi|3360092 3535 LRNLLNHYLITTAG 3548
Autoind_synth: domain 1 of 1, from 3556 to 3571: score 0.3, E = 9.3
CS EEEEEE-SHHHHHHHH
*->yLlhLPvDddsqqrLl<-*
y+++ +vD++ +++++
gi|3360092 3556 YAGRVDVDAAGHKQIV 3571
DUF1885: domain 1 of 1, from 3641 to 3646: score 1.3, E = 5.2
*->MyFykr<-*
MyFy+r
gi|3360092 3641 MYFYSR 3646
AHS2: domain 1 of 1, from 3745 to 3764: score 2.4, E = 1.4
*->LAQlrPGdkvRFvpvsleeA<-*
LAQ+ PG+ +R ++ + A
gi|3360092 3745 LAQAAPGSEIRLSEILQAVA 3764
HupH_C: domain 1 of 1, from 3752 to 3764: score 5.1, E = 0.24
*->SaeRLrEileale<-*
S+ RL+Eil+a++
gi|3360092 3752 SEIRLSEILQAVA 3764
HTH_DeoR: domain 1 of 1, from 3755 to 3767: score 2.1, E = 9.3
*->RieqIlelLkqqG<-*
R+ +Il+ ++q+G
gi|3360092 3755 RLSEILQAVAQSG 3767
LolB: domain 1 of 1, from 3801 to 3807: score 1.7, E = 5.1
*->kLvvdqW<-*
kLv++qW
gi|3360092 3801 KLVMQQW 3807
AIRS: domain 2 of 2, from 3897 to 3907: score 2.7, E = 2.3
CS HHT-EEEE--E
*->eaGvplvGGdT<-*
++ +pl+GG+T
gi|3360092 3897 RYSMPLLGGNT 3907
HNF-1A_C: domain 1 of 1, from 3912 to 3919: score 1.8, E = 4.4
*->TQMaSSsQ<-*
+QMaS+ Q
gi|3360092 3912 AQMASTIQ 3919
Type_III_YscP: domain 1 of 1, from 3983 to 4002: score 1.9, E = 4.1
*->tqGDllsPLHEPRYLagmeAastaqs<-*
qG+l EPR +ag+++a++ ++
gi|3360092 3983 -QGGLN----EPRAQAGASTAAP-NR 4002
DUF1205: domain 1 of 1, from 4048 to 4055: score 0.1, E = 8.4
*->geLPdNVR<-*
+eLP+N R
gi|3360092 4048 TELPANTR 4055
Alpha-amyl_C: domain 1 of 1, from 4067 to 4073: score 4.0, E = 4
CS SEEEE--
*->kGfGvYk<-*
kGf+vY+
gi|3360092 4067 KGFAVYQ 4073
DUF917: domain 1 of 1, from 4092 to 4102: score -0.1, E = 8.8
*->LseeDleaiat<-*
+s+ Dlea+a+
gi|3360092 4092 ISPADLEALAR 4102
Carot_N: domain 1 of 1, from 4202 to 4212: score 0.6, E = 9.1
*->RdiVvdMGfDp<-*
R+++ +MG+ +
gi|3360092 4202 RNAAAEMGASA 4212
//