hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 33865519.fa
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Query sequence: gi|33865519|ref|NP_897078.1|
Accession: [none]
Description: hypothetical protein SYNW0985 [Synechococcus sp. WH 8102]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
FG-GAP FG-GAP repeat 149.2 1.2e-42 10
BNR BNR/Asp-box repeat 27.0 7.6e-07 2
DUF1056 Protein of unknown function (DUF1056) 9.9 0.053 6
DUF1586 Protein of unknown function (DUF1586) 9.6 0.09 4
DUF1551 Protein of unknown function (DUF1551) 5.6 0.11 1
PKD PKD domain 6.5 0.19 2
CHB_HEX_C Chitobiase/beta-hexosaminidase C-term 7.7 0.28 2
DUF346 Repeat of unknown function (DUF346) 6.0 0.71 1
Prefoldin Prefoldin subunit 5.4 0.8 1
DUF348 Domain of unknown function (DUF348) 6.3 0.86 1
Transthyretin HIUase/Transthyretin family 4.2 1 2
Dockerin_1 Dockerin type I repeat 5.4 1.6 7
Glyco_hydro_76 Glycosyl hydrolase family 76 2.0 1.7 1
DUF776 Protein of unknown function (DUF776) 2.5 1.8 1
Big_3 Bacterial Ig-like domain (group 3) 4.6 2.3 2
Malic_M Malic enzyme, NAD binding domain 0.7 2.4 2
Y_Y_Y Y_Y_Y domain 3.4 2.7 2
Flagellin_IN Flagellin hook IN motif 4.0 2.8 5
DUF2385 Protein of unknown function (DUF2385) 2.3 2.9 1
PQQ_N Pyrrolo-quinoline quinone coenzyme N- 4.3 3.1 2
DUF2597 Protein of unknown function (DUF2598) 0.1 3.1 1
PEPcase Phosphoenolpyruvate carboxylase -1.7 4.4 1
Glyco_tran_WecB Glycosyl transferase WecB/TagA/CpsF f 1.3 5.6 1
Glyco_hydro_72 Glycolipid anchored surface protein ( 0.2 5.8 1
MutS_V MutS domain V 0.8 5.9 1
Sarcoglycan_1 Sarcoglycan complex subunit protein -0.1 6 1
Redoxin Redoxin 1.6 6.5 1
SoxZ Sulphur oxidation protein SoxZ 1.4 7 1
Toluene_X Outer membrane protein transport prot -0.5 7.1 1
HDC Histidine carboxylase PI chain -1.3 7.9 1
Cyclase Putative cyclase 0.9 8.3 1
UbiD 3-octaprenyl-4-hydroxybenzoate carbox -0.8 8.7 1
Snf7 Snf7 0.8 8.8 1
Fil_haemagg Haemagluttinin repeat 1.7 9.2 1
FlaG FlaG protein 1.8 9.2 1
Methyltrans_SAM S-adenosylmethionine-dependent methyl -1.2 9.3 1
Glyco_hydro_49 Glycosyl hydrolase family 49 -2.0 9.5 1
UPF0150 Uncharacterised protein family (UPF01 2.3 9.6 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Glyco_tran_WecB 1/1 21 34 .. 1 14 [. 1.3 5.6
DUF1551 1/1 44 58 .. 1 15 [. 5.6 0.11
UPF0150 1/1 44 54 .. 40 50 .] 2.3 9.6
DUF346 1/1 181 195 .. 26 42 .] 6.0 0.71
DUF776 1/1 211 246 .. 159 201 .] 2.5 1.8
PQQ_N 1/2 248 258 .. 34 44 .] 2.1 13
BNR 1/2 250 261 .. 1 12 [] 13.5 0.0093
CHB_HEX_C 1/2 250 261 .. 25 36 .. 3.8 3.2
Transthyretin 1/2 294 310 .. 1 17 [. 2.1 4
FG-GAP 1/10 325 354 .. 1 36 [] 15.9 0.0012
Dockerin_1 1/7 333 342 .. 1 10 [. 0.5 53
FG-GAP 2/10 381 410 .. 1 36 [] 13.6 0.0056
DUF2597 1/1 384 392 .. 122 130 .. 0.1 3.1
Dockerin_1 2/7 389 398 .. 1 10 [. 0.5 53
FG-GAP 3/10 437 466 .. 1 36 [] 17.2 0.00049
Cyclase 1/1 444 473 .. 122 149 .. 0.9 8.3
HDC 1/1 453 463 .. 86 96 .. -1.3 7.9
FG-GAP 4/10 493 522 .. 1 36 [] 17.1 0.00054
Dockerin_1 3/7 501 510 .. 1 10 [. 0.5 53
FG-GAP 5/10 549 578 .. 1 36 [] 13.9 0.0047
Glyco_hydro_76 1/1 556 577 .. 14 35 .. 2.0 1.7
Dockerin_1 4/7 557 566 .. 1 10 [. 0.6 50
Glyco_hydro_72 1/1 624 641 .. 1 18 [. 0.2 5.8
DUF1586 1/4 628 648 .. 1 22 [] 3.4 5.6
Flagellin_IN 1/5 661 689 .. 1 31 [. 1.1 19
UbiD 1/1 679 699 .. 428 448 .] -0.8 8.7
DUF1056 1/6 743 751 .. 59 72 .] 1.8 9.8
DUF1586 2/4 759 780 .. 1 22 [] 0.3 43
Flagellin_IN 2/5 793 847 .. 1 63 [] 1.4 15
DUF1056 2/6 875 883 .. 59 72 .] 1.8 9.8
DUF1586 3/4 891 912 .. 1 22 [] 3.0 7.2
Flagellin_IN 3/5 925 953 .. 1 31 [. 1.0 20
Glyco_hydro_49 1/1 981 1001 .. 1 21 [. -2.0 9.5
Malic_M 1/2 988 1001 .. 176 189 .. 0.4 3.2
DUF1056 3/6 1007 1015 .. 59 72 .] 1.8 9.8
Toluene_X 1/1 1012 1045 .. 480 513 .] -0.5 7.1
Flagellin_IN 4/5 1057 1111 .. 1 63 [] 0.4 30
DUF1056 4/6 1139 1147 .. 59 72 .] 1.8 9.8
DUF1586 4/4 1155 1176 .. 1 22 [] 3.0 7.2
Malic_M 2/2 1252 1265 .. 176 189 .. 0.4 3.2
DUF1056 5/6 1271 1279 .. 59 72 .] 1.8 9.8
Flagellin_IN 5/5 1321 1375 .. 1 63 [] 0.1 36
DUF1056 6/6 1403 1411 .. 59 72 .] 0.9 18
PQQ_N 2/2 1485 1495 .. 34 44 .] 2.1 13
BNR 2/2 1487 1498 .. 1 12 [] 13.5 0.0093
CHB_HEX_C 2/2 1487 1498 .. 25 36 .. 3.8 3.2
Transthyretin 2/2 1531 1547 .. 1 17 [. 2.1 4
FG-GAP 6/10 1562 1591 .. 1 36 [] 16.2 0.001
FG-GAP 7/10 1622 1646 .. 1 36 [] 10.6 0.042
Dockerin_1 5/7 1630 1639 .. 1 10 [. 0.5 53
DUF2385 1/1 1643 1652 .. 59 68 .. 2.3 2.9
FG-GAP 8/10 1682 1711 .. 1 36 [] 17.7 0.00035
MutS_V 1/1 1683 1698 .. 1 16 [. 0.8 5.9
Methyltrans_SAM 1/1 1686 1703 .. 269 286 .] -1.2 9.3
Dockerin_1 6/7 1690 1699 .. 1 10 [. 0.5 53
FG-GAP 9/10 1738 1767 .. 1 36 [] 11.8 0.019
Dockerin_1 7/7 1746 1756 .. 1 11 [. 2.4 13
PEPcase 1/1 1754 1771 .. 943 960 .] -1.7 4.4
FG-GAP 10/10 1794 1823 .. 1 36 [] 15.4 0.0017
Fil_haemagg 1/1 1839 1903 .. 1 75 [] 1.7 9.2
PKD 1/2 1873 1893 .. 72 92 .] 2.4 3.4
Y_Y_Y 1/2 1873 1894 .. 45 69 .] 0.7 18
Big_3 1/2 1966 1980 .. 54 70 .] 1.9 12
Sarcoglycan_1 1/1 2008 2026 .. 83 102 .. -0.1 6
Redoxin 1/1 2015 2053 .. 1 41 [. 1.6 6.5
Big_3 2/2 2044 2061 .. 54 70 .] 2.7 7.7
SoxZ 1/1 2055 2075 .. 82 104 .] 1.4 7
Y_Y_Y 2/2 2057 2078 .. 45 69 .] 2.7 4.3
DUF348 1/1 2058 2084 .. 1 27 [. 6.3 0.86
PKD 2/2 2058 2077 .. 73 92 .] 4.1 1
FlaG 1/1 2136 2176 .. 1 41 [. 1.8 9.2
Prefoldin 1/1 2156 2199 .. 1 45 [. 5.4 0.8
Snf7 1/1 2158 2186 .. 1 29 [. 0.8 8.8
Alignments of top-scoring domains:
Glyco_tran_WecB: domain 1 of 1, from 21 to 34: score 1.3, E = 5.6
*->elvneAdLilpDGi<-*
+ ++++Li++DG+
gi|3386551 21 TAAKASELIVADGA 34
DUF1551: domain 1 of 1, from 44 to 58: score 5.6, E = 0.11
*->sAEylllfrdGtglp<-*
+E+l+l+ dG++lp
gi|3386551 44 ATEALVLWLDGQELP 58
UPF0150: domain 1 of 1, from 44 to 54: score 2.3, E = 9.6
*->akEAlelhleg<-*
a EAl l+l+g
gi|3386551 44 ATEALVLWLDG 54
DUF346: domain 1 of 1, from 181 to 195: score 6.0, E = 0.71
*->krqtWlAgGsiaGtpvA<-*
+rq+W ++ G+pvA
gi|3386551 181 RRQAW--QAQLNGAPVA 195
DUF776: domain 1 of 1, from 211 to 246: score 2.5, E = 1.8
*->PlresvlelpresakeeaApetrPALGCGPGvseeseaAtdlS<-*
P +e v l ++s ++ ++ ++ G++ ++ aAt ++
gi|3386551 211 PAGETVANLFSSSFSDVDSDTLA-------GIAITANAATASQ 246
PQQ_N: domain 1 of 2, from 248 to 258: score 2.1, E = 13
CS EEEEE-S--S-
*->AWtfstGdlrg<-*
AW++st+d+
gi|3386551 248 AWQYSTDDGSN 258
BNR: domain 1 of 2, from 250 to 261: score 13.5, E = 0.0093
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+yStD+G +W++
gi|3386551 250 QYSTDDGSNWTA 261
CHB_HEX_C: domain 1 of 2, from 250 to 261: score 3.8, E = 3.2
*->EYSlDgGknWqt<-*
+YS+D+G nW++
gi|3386551 250 QYSTDDGSNWTA 261
Transthyretin: domain 1 of 2, from 294 to 310: score 2.1, E = 4
CS -SEEEEEEETTTTEE-T
*->gpLTTHVLDtarGkPAa<-*
g LTT D + G+PAa
gi|3386551 294 GALTTRLIDNSAGIPAA 310
FG-GAP: domain 1 of 10, from 325 to 354: score 15.9, E = 0.0012
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
++ ++ ++D++GDG D + g++ g+++++
gi|3386551 325 NYIAPDFVDIDGDGDLDAFI-------GNnHGNTVFF 354
Dockerin_1: domain 1 of 7, from 333 to 342: score 0.5, E = 53
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 333 DIDGDGDLDA 342
FG-GAP: domain 2 of 10, from 381 to 410: score 13.6, E = 0.0056
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
f++s+ ++D++GDG D + g++ g+++++
gi|3386551 381 FYASPDFVDIDGDGDLDAFI-------GNsVGNTVFF 410
DUF2597: domain 1 of 1, from 384 to 392: score 0.1, E = 3.1
*->SPDFVrING<-*
SPDFV I+G
gi|3386551 384 SPDFVDIDG 392
Dockerin_1: domain 2 of 7, from 389 to 398: score 0.5, E = 53
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 389 DIDGDGDLDA 398
FG-GAP: domain 3 of 10, from 437 to 466: score 17.2, E = 0.00049
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
s+++++D++ DG D + g+ +g+++++
gi|3386551 437 DRSTPVFADIDADGDLDAFI-------GQiNGTTVFF 466
Cyclase: domain 1 of 1, from 444 to 473: score 0.9, E = 8.3
*->edLeae..lerkgpalnpgdiVllrTGwsk<-*
+d++a ++l+++++++n+ + ++l+TG s+
gi|3386551 444 ADIDADgdLDAFIGQINGTTVFFLNTGTSA 473
HDC: domain 1 of 1, from 453 to 463: score -1.3, E = 7.9
*->dAYiGqINMlT<-*
dA+iGqIN +T
gi|3386551 453 DAFIGQINGTT 463
FG-GAP: domain 4 of 10, from 493 to 522: score 17.1, E = 0.00054
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ +++ ++D++GDG D + g++dg++ ++
gi|3386551 493 TRAAPDFVDIDGDGDLDAFI-------GGtDGTTAFF 522
Dockerin_1: domain 3 of 7, from 501 to 510: score 0.5, E = 53
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 501 DIDGDGDLDA 510
FG-GAP: domain 5 of 10, from 549 to 578: score 13.9, E = 0.0047
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+++++++D++GDG+ D + g++ g+++++
gi|3386551 549 LAAAPVFADIDGDGLLDAFI-------GDrWGNTVFF 578
Glyco_hydro_76: domain 1 of 1, from 556 to 577: score 2.0, E = 1.7
*->taliadglldYYtgtsyGgtag<-*
+++++dglld++ g ++G t++
gi|3386551 556 ADIDGDGLLDAFIGDRWGNTVF 577
Dockerin_1: domain 4 of 7, from 557 to 566: score 0.6, E = 50
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 557 DIDGDGLLDA 566
Glyco_hydro_72: domain 1 of 1, from 624 to 641: score 0.2, E = 5.8
*->llalaaassaeaatppIe<-*
+l+l+ a+ a+++ p+I+
gi|3386551 624 TLSLSTAVTAVNDSPTIT 641
DUF1586: domain 1 of 4, from 628 to 648: score 3.4, E = 5.6
*->sRtALAAvsqtPtgAnAewhll<-*
tA+ Av+ Pt A l
gi|3386551 628 -STAVTAVNDSPTITGAGSTLA 648
Flagellin_IN: domain 1 of 5, from 661 to 689: score 1.1, E = 19
*->tltinggggkensvadgvdislsag.dslaal<-*
+lti+ ++ ++ +++ ++s+s+g s++++
gi|3386551 661 SLTITDADDTN---IESATVSISSGfQSAEDV 689
UbiD: domain 1 of 1, from 679 to 699: score -0.8, E = 8.7
*->iaTRvdPdrDlvIipnapgds<-*
i++ ++ + D+++++n+++ s
gi|3386551 679 ISSGFQSAEDVLAFSNTSSIS 699
DUF1056: domain 1 of 6, from 743 to 751: score 1.8, E = 9.8
*->vSEvvtkkdkKGGd<-*
+S+vv++ Gd
gi|3386551 743 ISWVVND-----GD 751
DUF1586: domain 2 of 4, from 759 to 780: score 0.3, E = 43
*->sRtALAAvsqtPtgAnAewhll<-*
s +AAv+ P A l
gi|3386551 759 STISVAAVNDAPVISGASATLA 780
Flagellin_IN: domain 2 of 5, from 793 to 847: score 1.4, E = 15
*->tltinggggkensvadgvdislsag.dslaaladaINsaaaktGVsA
+lti+ ++ ++ +++ +i++s+g s++++ + + ++a+tG
gi|3386551 793 SLTITDADDSN---IESATITISSGfQSTEDVLAFLD-TSAITG--- 832
svdadtnggrLvltstt<-*
s da+t g L+lt ++
gi|3386551 833 SWDAST--GVLTLTGSG 847
DUF1056: domain 2 of 6, from 875 to 883: score 1.8, E = 9.8
*->vSEvvtkkdkKGGd<-*
+S+vv++ Gd
gi|3386551 875 ISWVVND-----GD 883
DUF1586: domain 3 of 4, from 891 to 912: score 3.0, E = 7.2
*->sRtALAAvsqtPtgAnAewhll<-*
s +AAv+ P A A l
gi|3386551 891 STISVAAVNDAPVIAGASATLA 912
Flagellin_IN: domain 3 of 5, from 925 to 953: score 1.0, E = 20
*->tltinggggkensvadgvdislsag.dslaal<-*
+lti+ ++ ++ +++ ++s+s+g s++++
gi|3386551 925 SLTITDADDSN---IESATVSISSGfQSAEDV 953
Glyco_hydro_49: domain 1 of 1, from 981 to 1001: score -2.0, E = 9.5
CS XXXXXXXXXXXXX----BSSS
*->pgtsspAlkveqaavTangad<-*
+++ ++A++ + ++T ++++
gi|3386551 981 LANYKAAFESVTYNNTSDNPN 1001
Malic_M: domain 1 of 2, from 988 to 1001: score 0.4, E = 3.2
CS ...EEETTEEESSE
*->FpPVelnGrsdyPN<-*
F++V++n+ sd PN
gi|3386551 988 FESVTYNNTSDNPN 1001
DUF1056: domain 3 of 6, from 1007 to 1015: score 1.8, E = 9.8
*->vSEvvtkkdkKGGd<-*
+S+vv++ Gd
gi|3386551 1007 ISWVVND-----GD 1015
Toluene_X: domain 1 of 1, from 1012 to 1045: score -0.5, E = 7.1
CS ...........EETTEE.EEEEEEEEEEEEEEEE
*->atgdggvtalqgtlpgtfvsasahllalsynyrF<-*
++gd ++a +t+++t v+++ ++ ++s++ F
gi|3386551 1012 NDGDTNSSAVTSTITVTAVNNAPVISGASATLAF 1045
Flagellin_IN: domain 4 of 5, from 1057 to 1111: score 0.4, E = 30
*->tltinggggkensvadgvdislsag.dslaaladaINsaaaktGVsA
+lti+ ++ ++ +++ ++s+s+g s++++ + + +s
gi|3386551 1057 SLTITDADDTN---IESATVSISSGfQSAEDVLAFLD----TSSISG 1096
svdadtnggrLvltstt<-*
s +a+t g L+lt ++
gi|3386551 1097 SWNAST--GVLTLTGSG 1111
DUF1056: domain 4 of 6, from 1139 to 1147: score 1.8, E = 9.8
*->vSEvvtkkdkKGGd<-*
+S+vv++ Gd
gi|3386551 1139 ISWVVND-----GD 1147
DUF1586: domain 4 of 4, from 1155 to 1176: score 3.0, E = 7.2
*->sRtALAAvsqtPtgAnAewhll<-*
s +AAv+ P A A l
gi|3386551 1155 STISVAAVNDAPVIAGASATLA 1176
Malic_M: domain 2 of 2, from 1252 to 1265: score 0.4, E = 3.2
CS ...EEETTEEESSE
*->FpPVelnGrsdyPN<-*
F++V++n+ sd PN
gi|3386551 1252 FESVTYNNTSDNPN 1265
DUF1056: domain 5 of 6, from 1271 to 1279: score 1.8, E = 9.8
*->vSEvvtkkdkKGGd<-*
+S+vv++ Gd
gi|3386551 1271 ISWVVND-----GD 1279
Flagellin_IN: domain 5 of 5, from 1321 to 1375: score 0.1, E = 36
*->tltinggggkensvadgvdislsag.dslaaladaINsaaaktGVsA
+lti+ ++ ++ +++ ++s+s+g s++++ + + +s
gi|3386551 1321 SLTITDADDTN---IESATVSISSGfQSAEDVLAFLD----TSSISG 1360
svdadtnggrLvltstt<-*
s +a+t g L+lt ++
gi|3386551 1361 SWNAST--GVLTLTGSD 1375
DUF1056: domain 6 of 6, from 1403 to 1411: score 0.9, E = 18
*->vSEvvtkkdkKGGd<-*
+S++v++ Gd
gi|3386551 1403 ISWLVND-----GD 1411
PQQ_N: domain 2 of 2, from 1485 to 1495: score 2.1, E = 13
CS EEEEE-S--S-
*->AWtfstGdlrg<-*
AW++st+d+
gi|3386551 1485 AWQYSTDDGSN 1495
BNR: domain 2 of 2, from 1487 to 1498: score 13.5, E = 0.0093
CS EEESSTTSSEEE
*->yyStDgGkTWsk<-*
+yStD+G +W++
gi|3386551 1487 QYSTDDGSNWTA 1498
CHB_HEX_C: domain 2 of 2, from 1487 to 1498: score 3.8, E = 3.2
*->EYSlDgGknWqt<-*
+YS+D+G nW++
gi|3386551 1487 QYSTDDGSNWTA 1498
Transthyretin: domain 2 of 2, from 1531 to 1547: score 2.1, E = 4
CS -SEEEEEEETTTTEE-T
*->gpLTTHVLDtarGkPAa<-*
g LTT D + G+PAa
gi|3386551 1531 GALTTRLIDNSAGIPAA 1547
FG-GAP: domain 6 of 10, from 1562 to 1591: score 16.2, E = 0.001
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
++++++D++ DG D + g+ dg+++++
gi|3386551 1562 SNAAPVFADIDADGDLDAFI-------GNyDGNTVFF 1591
FG-GAP: domain 7 of 10, from 1622 to 1646: score 10.6, E = 0.042
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
+ + + ++D++GDG D + g+++ +
gi|3386551 1622 YEARPDFVDIDGDGDLDAFI-------GNrG-----Y 1646
Dockerin_1: domain 5 of 7, from 1630 to 1639: score 0.5, E = 53
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 1630 DIDGDGDLDA 1639
DUF2385: domain 1 of 1, from 1643 to 1652: score 2.3, E = 2.9
*->NrGYRaFasv<-*
NrGYR+F ++
gi|3386551 1643 NRGYRTFGDT 1652
FG-GAP: domain 8 of 10, from 1682 to 1711: score 17.7, E = 0.00035
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
++ ++ ++D++GDG D + g++dg+++++
gi|3386551 1682 YYVAPEFVDIDGDGDLDAFI-------GNnDGNTVFF 1711
MutS_V: domain 1 of 1, from 1683 to 1698: score 0.8, E = 5.9
CS EB--EESS..S...EE
*->YvRPeftesdaegelh<-*
Yv Pef++ d++g+l+
gi|3386551 1683 YVAPEFVDIDGDGDLD 1698
Methyltrans_SAM: domain 1 of 1, from 1686 to 1703: score -1.2, E = 9.3
*->PEFvDVDseaaLKvLlFr<-*
PEFvD+D + L +
gi|3386551 1686 PEFVDIDGDGDLDAFIGN 1703
Dockerin_1: domain 6 of 7, from 1690 to 1699: score 0.5, E = 53
CS -TT-SS--SH
*->DvNgDGkVna<-*
D++gDG +a
gi|3386551 1690 DIDGDGDLDA 1699
FG-GAP: domain 9 of 10, from 1738 to 1767: score 11.8, E = 0.019
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
s++ ++D++GDG D ++ g+ g ++++
gi|3386551 1738 DRSNPDFADIDGDGDLDALI-------GDiRGLTVFF 1767
Dockerin_1: domain 7 of 7, from 1746 to 1756: score 2.4, E = 13
CS -TT-SS--SHH
*->DvNgDGkVnal<-*
D++gDG +al
gi|3386551 1746 DIDGDGDLDAL 1756
PEPcase: domain 1 of 1, from 1754 to 1771: score -1.7, E = 4.4
*->DtLiLtmKGiAAGmqntG<-*
D Li ++G+ qntG
gi|3386551 1754 DALIGDIRGLTVFFQNTG 1771
FG-GAP: domain 10 of 10, from 1794 to 1823: score 15.4, E = 0.0017
CS CCSCEEEC-TTSSSSSEEEEEETCCCSCC TSEEEEE
*->fgssvaagDlnGDGrpDlvvgaPgadggt.dgsvyll<-*
s++ ++D++ DG D + g++dg+++++
gi|3386551 1794 SRSAPDFADIDADGDLDAFI-------GNnDGNTVYF 1823
Fil_haemagg: domain 1 of 1, from 1839 to 1903: score 1.7, E = 9.2
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE-S-EEESS
*->vaaGaltlnaa.....alggldlnnggtlsagggltltaagllnngg
+ +G + +a++ + +++g++++ ++tls + ++t++ + ++nn
gi|3386551 1839 AGSGPDRADAStvdvsTNGNTTDISAATLSLSTAVTVQVTDDDNNNE 1885
CS E...................EEEEESS-EEEEE
tliaggdlllaagalrnggdltltaaGdLdnsg<-*
t+ + lt++aa+d+ +
gi|3386551 1886 TQVIS---------------LTVNAADDIVADS 1903
PKD: domain 1 of 2, from 1873 to 1893: score 2.4, E = 3.4
CS EEEEEEETTCEEEEEEEEEEE
*->VtLtvsngvgsasattttvtV<-*
Vt+ v+++ +++ ++ +++tV
gi|3386551 1873 VTVQVTDDDNNNETQVISLTV 1893
Y_Y_Y: domain 1 of 2, from 1873 to 1894: score 0.7, E = 18
*->ikvkakdkdgnwsyddiasltftvl<-*
++v+++d+d+n++ + +++tv+
gi|3386551 1873 VTVQVTDDDNNNET---QVISLTVN 1894
Big_3: domain 1 of 2, from 1966 to 1980: score 1.9, E = 12
*->TytYkGqpvtatftVtV<-*
T+t G vt+t+tV V
gi|3386551 1966 TVTSGG--VTETATVSV 1980
Sarcoglycan_1: domain 1 of 1, from 2008 to 2026: score -0.1, E = 6
*->pLtieSDAGDGESnrnVtVn<-*
+L+++ DA DG+S+ n+tV+
gi|3386551 2008 TLSFT-DAADGDSTPNFTVS 2026
Redoxin: domain 1 of 1, from 2015 to 2053: score 1.6, E = 6.5
CS -TTSB--...--EE....EEEHH HHTT----S- --- HHSTT
*->kvGdkaPagtdfsliPssvdldg.kevtlcggPq.fdl.sdfkG<-*
+ Gd+ P +f+ ss ++ g+++++++ g+ ++++++df G
gi|3386551 2015 ADGDSTP---NFTV--SSAATSGtASINATTGAWtYTPnADFNG 2053
Big_3: domain 2 of 2, from 2044 to 2061: score 2.7, E = 7.7
*->TytYkGq.pvtatftVtV<-*
Tyt+ + + + +ftV+V
gi|3386551 2044 TYTPNADfNGSDSFTVEV 2061
SoxZ: domain 1 of 1, from 2055 to 2075: score 1.4, E = 7
CS E.EEEEEEETTS-EEEEEEEE--
*->delkfsWtDnkGssetaeakItv<-*
d+++++ tD +G++et + I++
gi|3386551 2055 DSFTVEVTDGDGNKETQT--ISL 2075
Y_Y_Y: domain 2 of 2, from 2057 to 2078: score 2.7, E = 4.3
*->ikvkakdkdgnwsyddiasltftvl<-*
++v+++d dgn++ +++++t+
gi|3386551 2057 FTVEVTDGDGNKET---QTISLTID 2078
DUF348: domain 1 of 1, from 2058 to 2084: score 6.3, E = 0.86
*->pVtvvvDGkektvwTtAtTVaelLeel<-*
+V+v+++ k+ T ++T++e++e +
gi|3386551 2058 TVEVTDGDGNKETQTISLTIDEAVEDE 2084
PKD: domain 2 of 2, from 2058 to 2077: score 4.1, E = 1
CS EEEEEETTCEEEEEEEEEEE
*->tLtvsngvgsasattttvtV<-*
t+ v++g g+ ++t+++t+
gi|3386551 2058 TVEVTDGDGNKETQTISLTI 2077
FlaG: domain 1 of 1, from 2136 to 2176: score 1.8, E = 9.2
*->stsksleqtiqqqkrsaaksvkeaaeenaaeeqkiskedle<-*
++++ + i+ + +++a+s++ea+e+ ++++q+++ e+++
gi|3386551 2136 TVTLPPGVSITSEGSADAQSSEEAQESLTESIQQLNSETET 2176
Prefoldin: domain 1 of 1, from 2156 to 2199: score 5.4, E = 0.8
CS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT...-TT-EEEE
*->lkqeiesLqaelaaLreaieeleksletlktlkkkeedegkevlv<-
++ esL+ ++ +L+++ e+ ++++ +++++++ +++++ v v
gi|3386551 2156 SEEAQESLTESIQQLNSETETTDDLIGNVNNFIN-QLPDSTQVDV 2199
CS
*
gi|3386551 - -
Snf7: domain 1 of 1, from 2158 to 2186: score 0.8, E = 8.8
*->eailsLrkaireLdkkqeslekkikklea<-*
ea+ sL++ i++L+ + e + +i ++++
gi|3386551 2158 EAQESLTESIQQLNSETETTDDLIGNVNN 2186
//