hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 34495919.fa
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Query sequence: gi|34495919|ref|NP_900134.1|
Accession: [none]
Description: hypothetical protein CV_0464 [Chromobacterium violaceum ATCC 12472]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Flagellin_IN Flagellin hook IN motif 21.4 3.6e-05 6
PKD PKD domain 14.9 0.00049 5
He_PIG Putative Ig domain 16.1 0.00085 1
Invas_SpaK Invasion protein B family 15.4 0.0019 4
HYR HYR domain 13.3 0.0026 2
Rgp1 Rgp1 11.7 0.0056 3
MucBP MucBP domain 12.2 0.015 4
DUF2134 Predicted membrane protein (DUF2134) 8.7 0.048 2
GSPII_IJ Bacterial type II secretion system pr 7.2 0.22 1
GspL General secretion pathway protein L ( 5.2 0.3 1
Cohesin Cohesin domain 5.5 0.55 3
Wzy_C O-Antigen Polymerase 6.2 0.77 3
DUF1527 Protein of unknown function (DUF1527) 2.8 0.86 1
PD-C2-AF1 POU domain, class 2, associating fact 2.1 1.2 1
Cna_B Cna protein B-type domain 3.4 1.7 1
Trypan_glycop Trypanosome variant surface glycoprot 3.3 2 1
Autotransporter Autotransporter beta-domain 2.4 2.7 1
2-Hacid_dh D-isomer specific 2-hydroxyacid dehyd 2.3 3.7 1
CARDB CARDB 3.1 3.7 1
DUF1522 Domain of Unknown Function (DUF1522) 2.2 4 1
DNA_gyraseA_C DNA gyrase C-terminal domain, beta-pr 4.1 4.3 2
Memo Memo-like protein 0.1 5 1
A2M_N Alpha-2-macroglobulin family N-termin 0.5 5.4 1
Glycos_transf_2 Glycosyl transferase family 2 1.1 5.6 1
Glug The GLUG motif 2.7 6 1
DAG1 Dystroglycan (Dystrophin-associated g -1.3 6.4 1
Tenui_N Tenuivirus nucleocapsid protein -0.2 6.8 1
FAD_binding_2 FAD binding domain -0.6 7 1
adh_short short chain dehydrogenase 1.2 7.1 1
DUF2451 Protein of unknown function C-terminu 1.2 7.7 1
Methyltransf_12 Methyltransferase domain 2.1 7.9 1
Galactosyl_T_2 Galactosyltransferase -0.5 9.4 1
FMN_red NADPH-dependent FMN reductase 0.6 9.7 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PD-C2-AF1 1/1 1 18 [. 1 18 [. 2.1 1.2
Glycos_transf_2 1/1 103 130 .. 18 47 .. 1.1 5.6
2-Hacid_dh 1/1 115 138 .. 1 30 [. 2.3 3.7
DUF2451 1/1 130 145 .. 222 240 .. 1.2 7.7
adh_short 1/1 166 213 .. 33 90 .. 1.2 7.1
Methyltransf_12 1/1 167 184 .. 92 109 .] 2.1 7.9
Autotransporter 1/1 330 403 .. 1 87 [. 2.4 2.7
Glug 1/1 363 393 .. 1 38 [] 2.7 6
Invas_SpaK 1/4 479 494 .. 66 81 .] 7.0 0.38
DNA_gyraseA_C 1/2 484 494 .. 1 11 [. 2.0 15
Flagellin_IN 1/6 499 517 .. 43 63 .] 1.6 13
Tenui_N 1/1 519 533 .. 1 15 [. -0.2 6.8
DUF1522 1/1 564 602 .. 71 108 .. 2.2 4
GSPII_IJ 1/1 704 734 .. 52 82 .] 7.2 0.22
PKD 1/5 710 730 .. 71 92 .] 4.6 0.71
Cohesin 1/3 739 767 .. 135 164 .] 2.8 3.1
Trypan_glycop 1/1 741 767 .. 227 259 .] 3.3 2
Invas_SpaK 2/4 784 799 .. 66 81 .] 7.0 0.38
DNA_gyraseA_C 2/2 789 799 .. 1 11 [. 2.0 15
Flagellin_IN 2/6 804 822 .. 43 63 .] 2.1 10
MucBP 1/4 845 878 .. 1 39 [. 0.2 27
PKD 2/5 852 872 .. 71 92 .] 2.5 3.1
Cohesin 2/3 881 911 .. 133 164 .] 0.8 11
Rgp1 1/3 917 931 .. 1 15 [. 4.3 0.52
Flagellin_IN 3/6 949 967 .. 43 63 .] 3.3 4.4
Wzy_C 1/3 965 983 .. 1 19 [. 2.3 8.8
MucBP 2/4 990 1017 .. 1 28 [. 4.3 2.1
PKD 3/5 997 1018 .. 71 92 .] 1.8 5.3
Cohesin 3/3 1025 1055 .. 133 164 .] 1.9 5.5
Rgp1 2/3 1061 1075 .. 1 15 [. 3.7 0.74
Invas_SpaK 3/4 1072 1086 .. 66 81 .] 1.1 16
Flagellin_IN 4/6 1093 1111 .. 43 63 .] 8.8 0.12
Wzy_C 2/3 1109 1126 .. 1 18 [. 2.9 6.1
MucBP 3/4 1134 1161 .. 1 28 [. 5.0 1.3
Flagellin_IN 5/6 1141 1166 .. 1 26 [. 0.6 27
Rgp1 3/3 1203 1217 .. 1 15 [. 3.7 0.74
Invas_SpaK 4/4 1214 1229 .. 66 81 .] 0.3 26
Flagellin_IN 6/6 1235 1253 .. 43 63 .] 4.9 1.5
GspL 1/1 1240 1286 .. 352 401 .] 5.2 0.3
Wzy_C 3/3 1251 1267 .. 1 17 [. 1.0 20
DUF2134 1/2 1325 1342 .. 101 115 .] 3.5 1.8
Cna_B 1/1 1341 1363 .. 1 22 [. 3.4 1.7
DUF2134 2/2 1426 1443 .. 101 115 .] 5.2 0.53
A2M_N 1/1 1439 1481 .. 26 74 .. 0.5 5.4
CARDB 1/1 1441 1460 .. 35 56 .. 3.1 3.7
HYR 1/2 1472 1492 .. 54 75 .. 8.5 0.065
PKD 4/5 1475 1504 .. 61 92 .] 5.6 0.34
MucBP 4/4 1479 1504 .. 83 108 .] 2.8 5.2
Galactosyl_T_2 1/1 1499 1510 .. 270 282 .] -0.5 9.4
HYR 2/2 1504 1555 .. 1 54 [. 4.7 0.89
PKD 5/5 1560 1590 .. 58 92 .] 0.4 14
DUF1527 1/1 1608 1635 .. 1 27 [. 2.8 0.86
FMN_red 1/1 1649 1674 .. 167 193 .] 0.6 9.7
Memo 1/1 1671 1683 .. 1 13 [. 0.1 5
FAD_binding_2 1/1 1681 1689 .. 567 575 .] -0.6 7
DAG1 1/1 1724 1765 .. 39 82 .. -1.3 6.4
He_PIG 1/1 1747 1796 .. 1 61 [] 16.1 0.00085
Alignments of top-scoring domains:
PD-C2-AF1: domain 1 of 1, from 1 to 18: score 2.1, E = 1.2
*->mlWqKssAsEqaPaPpRP<-*
m W Ks+ E a + RP
gi|3449591 1 MAWWKSTGRESAKQAARP 18
Glycos_transf_2: domain 1 of 1, from 103 to 130: score 1.1, E = 5.6
CS HHHHCHSCGGEEEEEEEE-S-SHCHHHHCC
*->eSllnQttyenfEiivVDDgStDgtveiae<-*
+Sl++Q + n+++++ D Dg+++ia+
gi|3449591 103 RSLIAQ-LPSNYQVVILDSSK-DGLAQIAQ 130
2-Hacid_dh: domain 1 of 1, from 115 to 138: score 2.3, E = 3.7
CS EEE-S-......-TTTHHHHHHHHHHH--.
RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
*->vllldnyqnplrrpeelallkewnkdnggv<-*
v++ld + ++la + +w+++++g+
gi|3449591 115 VVILDS------SKDGLAQIAQWARTHHGY 138
DUF2451: domain 1 of 1, from 130 to 145: score 1.2, E = 7.7
*->qWirehparDEYSkKQlts<-*
qW+r+h+ +YS + +s
gi|3449591 130 QWARTHH---GYSAIHIIS 145
adh_short: domain 1 of 1, from 166 to 213: score 1.2, E = 7.1
CS SSH..HHHHHHHH....HHHHHHTTEEEEEEE.TTTHHHHHHHHHHH
*->sRrGpdapgaaeLrriavaeLealGAeVtvaacDVaDrdalaallaa
sR+ + +a ++L+ G ++ + cDVa + aal++a
gi|3449591 166 SRQ----AELATI----GQALR-PGGDILLYGCDVAEGSDGAALVNA 203
CS HH.HHTSCCCE
ipkaaegPLtg<-*
i++ + g++t+
gi|3449591 204 IAR-ESGRVTA 213
Methyltransf_12: domain 1 of 1, from 167 to 184: score 2.1, E = 7.9
*->prevLrnlrrlLkPGGvl<-*
+++ L+ + ++L+PGG +
gi|3449591 167 RQAELATIGQALRPGGDI 184
Autotransporter: domain 1 of 1, from 330 to 403: score 2.4, E = 2.7
CS C CS--SSEEEEEEEEEEEEEE-SS-EEE....EEEEEEEEEEEEEE
*->p.gdngvWarglggrlkytdssggingfrfqtesrsgGlqlGidtkl
+ +n ++ +l++ + + +g++ s+ +G +l + +l
gi|3449591 330 SvKPNDGSLFTLNSISV------VLDGYN----SSFSGGTLVLQGYL 366
CS ..ETTEEEEEEEEEEEEEE......EETTEEEEEEEEEEEE
tdgdglslGlafgygrskskfkndgdsdggsgksnsyglGv<-*
+++l+ G++++++ s+++ + + + +++sns ++G+
gi|3449591 367 --NGSLVSGATLSQSVSDIDNSG--SVVTFNVSSNSNFQGI 403
Glug: domain 1 of 1, from 363 to 393: score 2.7, E = 6
*->gnsavGGLvGgaegggrGeqenpgsienctatgnvtvt<-*
++ G+Lv ga+ + +++++i+n+ + + t +
gi|3449591 363 QGYLNGSLVSGATLS-----QSVSDIDNSGSVV--TFN 393
Invas_SpaK: domain 1 of 4, from 479 to 494: score 7.0, E = 0.38
CS ..TBTTSS-EEEEETT
*->GNFaigelvllfrene<-*
GNF+ ge vl f n+
gi|3449591 479 GNFHSGEDVLAFTNNG 494
DNA_gyraseA_C: domain 1 of 2, from 484 to 494: score 2.0, E = 15
CS TCEEEEEETTS
*->eddlllvTsnG<-*
++d+l +T+nG
gi|3449591 484 GEDVLAFTNNG 494
Flagellin_IN: domain 1 of 6, from 499 to 517: score 1.6, E = 13
*->GVsAsvdadtnggrLvltstt<-*
++s s++ +t g L+lts++
gi|3449591 499 NISGSYNSGT--GVLTLTSAG 517
Tenui_N: domain 1 of 1, from 519 to 533: score -0.2, E = 6.8
*->panladlqkaindIs<-*
a++a +q a++ ++
gi|3449591 519 TATNAQWQAALEAVT 533
DUF1522: domain 1 of 1, from 564 to 602: score 2.2, E = 4
*->VqtAtisnGaA.TiAtsaGsaaSsvaagGaLtLststgA<-*
++t+t+++ aA+ i + +G + a++Ga+ L t+t+A
gi|3449591 564 TKTVTVAADAApVISNLNGDSNTYYAGNGAVHLDTGTAA 602
GSPII_IJ: domain 1 of 1, from 704 to 734: score 7.2, E = 0.22
*->adpnlravdVeVrrdegqasplAslrsyvak<-*
++ r + V+V ++g++s++As+++ v++
gi|3449591 704 PNTSTRTIQVTVNDGRGGTSSAASVTMAVSA 734
PKD: domain 1 of 5, from 710 to 730: score 4.6, E = 0.71
CS EEEEEEEETTCEEEEEEEEEEE
*->tVtLtvsngvgsasattttvtV<-*
t+++tv++g g +s+ ++vt
gi|3449591 710 TIQVTVNDGRGGTSSA-ASVTM 730
Cohesin: domain 1 of 3, from 739 to 767: score 2.8, E = 3.1
CS EECCEEEEECCCTCE-C-EEEE.E-EEES-
*->pvsisslgafddntlteisvvtatnGsvtV<-*
+++ ++ af++++++ ++v+ ++G++tV
gi|3449591 739 ATTSGGSAAFTAGDNATSTPVA-VDGGITV 767
Trypan_glycop: domain 1 of 1, from 741 to 767: score 3.3, E = 2
CS CSS.SS.TTTTSC-SSSSSS.S-EEECCCTEEE
*->fsgqddphstnglvttaatldaalpllgGylti<-*
+sg +++ +t+++++++++ ++G +t+
gi|3449591 741 TSG------GSAAFTAGDNATSTPVAVDGGITV 767
Invas_SpaK: domain 2 of 4, from 784 to 799: score 7.0, E = 0.38
CS ..TBTTSS-EEEEETT
*->GNFaigelvllfrene<-*
GNF+ ge vl f n+
gi|3449591 784 GNFHSGEDVLAFTNNG 799
DNA_gyraseA_C: domain 2 of 2, from 789 to 799: score 2.0, E = 15
CS TCEEEEEETTS
*->eddlllvTsnG<-*
++d+l +T+nG
gi|3449591 789 GEDVLAFTNNG 799
Flagellin_IN: domain 2 of 6, from 804 to 822: score 2.1, E = 10
*->GVsAsvdadtnggrLvltstt<-*
++s s++ +t g L+lts++
gi|3449591 804 NISGSYNSGT--GVLTLTSSG 822
MucBP: domain 1 of 4, from 845 to 878: score 0.2, E = 27
*->ltktvtvTvhYvDedGnela.pdvvQtvtFtRtiyRgtvD<-*
+++t+Tv ++ +dG+ ++ + tvt t+t D
gi|3449591 845 TPNSATRTVSFQVADGSSNTsAALTRTVTVTQT------D 878
PKD: domain 2 of 5, from 852 to 872: score 2.5, E = 3.1
CS EEEEEEEETTCEEEEEEEEEEE
*->tVtLtvsngvgsasattttvtV<-*
tV+ v +g +++sa +t tV
gi|3449591 852 TVSFQVADGSSNTSAA-LTRTV 872
Cohesin: domain 2 of 3, from 881 to 911: score 0.8, E = 11
CS TCEECCEEEEECCCTCE-C-EEEE.E-EEES-
*->ttpvsisslgafddntlteisvvtatnGsvtV<-*
+ ++ +++af+++++t ++v+ ++G++t
gi|3449591 881 PIATASGGSTAFTAGDNTTSTPVA-VDGGITL 911
Rgp1: domain 1 of 3, from 917 to 931: score 4.3, E = 0.52
*->etLlwgYaQihGqfv<-*
+tL++++a i G+f+
gi|3449591 917 TTLASATASITGNFH 931
Flagellin_IN: domain 3 of 6, from 949 to 967: score 3.3, E = 4.4
*->GVsAsvdadtnggrLvltstt<-*
++ As++ +t g L+l+s++
gi|3449591 949 NIVASYNSGT--GVLSLSSSG 967
Wzy_C: domain 1 of 3, from 965 to 983: score 2.3, E = 8.8
*->dssnggRldiWeaalnmik<-*
+s++++ l+ W+aal++ k
gi|3449591 965 SSGATATLAQWQAALRAVK 983
MucBP: domain 2 of 4, from 990 to 1017: score 4.3, E = 2.1
*->ltktvtvTvhYvDedGnelapdvvQtvt<-*
+t+t+Tv +v dG++ + ++ tvt
gi|3449591 990 TPNTATRTVSFVVNDGTKNSAATTKTVT 1017
PKD: domain 3 of 5, from 997 to 1018: score 1.8, E = 5.3
CS EEEEEEEETTCEEEEEEEEEEE
*->tVtLtvsngvgsasattttvtV<-*
tV+ +v++g +++att+tvtV
gi|3449591 997 TVSFVVNDGTKNSAATTKTVTV 1018
Cohesin: domain 3 of 3, from 1025 to 1055: score 1.9, E = 5.5
CS TCEECCEEEEECCCTCE-C-EEEE.E-EEES-
*->ttpvsisslgafddntlteisvvtatnGsvtV<-*
+ ++ ++ af+++++t ++v+ ++G++t
gi|3449591 1025 PIATASGGSAAFTAGNNTASTPVA-VDGGITL 1055
Rgp1: domain 2 of 3, from 1061 to 1075: score 3.7, E = 0.74
*->etLlwgYaQihGqfv<-*
+tL+++++ i G+f+
gi|3449591 1061 TTLASATVSITGNFH 1075
Invas_SpaK: domain 3 of 4, from 1072 to 1086: score 1.1, E = 16
CS ..TBTTSS-EEEEETT
*->GNFaigelvllfrene<-*
GNF+ ge +l f +n+
gi|3449591 1072 GNFHSGEDALAF-SNT 1086
Flagellin_IN: domain 4 of 6, from 1093 to 1111: score 8.8, E = 0.12
*->GVsAsvdadtnggrLvltstt<-*
++sAs++ +t g L+lts++
gi|3449591 1093 NISASYNSGT--GVLTLTSSG 1111
Wzy_C: domain 2 of 3, from 1109 to 1126: score 2.9, E = 6.1
*->dssnggRldiWeaalnmi<-*
+s++++ l+ W+aal++i
gi|3449591 1109 SSGATATLAQWQAALRAI 1126
MucBP: domain 3 of 4, from 1134 to 1161: score 5.0, E = 1.3
*->ltktvtvTvhYvDedGnelapdvvQtvt<-*
+ +t+Tv +v dG++ + + tvt
gi|3449591 1134 TPNNATRTVSFVVNDGTKNSAAATRTVT 1161
Flagellin_IN: domain 5 of 6, from 1141 to 1166: score 0.6, E = 27
*->tltinggggkensvadgvdislsagd<-*
t+++ +++g++ns a + +++++++d
gi|3449591 1141 TVSFVVNDGTKNSAAATRTVTVADTD 1166
Rgp1: domain 3 of 3, from 1203 to 1217: score 3.7, E = 0.74
*->etLlwgYaQihGqfv<-*
+tL+++++ i G+f+
gi|3449591 1203 TTLASATVSITGNFH 1217
Invas_SpaK: domain 4 of 4, from 1214 to 1229: score 0.3, E = 26
CS ..TBTTSS-EEEEETT
*->GNFaigelvllfrene<-*
GNF+ ge vl f
gi|3449591 1214 GNFHSGEDVLAFTNTN 1229
Flagellin_IN: domain 6 of 6, from 1235 to 1253: score 4.9, E = 1.5
*->GVsAsvdadtnggrLvltstt<-*
++ As++ +t g L+lts++
gi|3449591 1235 NIVASYNSGT--GVLTLTSSG 1253
GspL: domain 1 of 1, from 1240 to 1286: score 5.2, E = 0.3
CS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX..X
*->YdgarlelrltleakddadleqlrarlatvGlqveagskqregdllq
Y+++ + l+lt ++ + a l+q++a+l+ v ++ +ags + + +
gi|3449591 1240 YNSGTGVLTLT-SSGATATLAQWQAALQAVTYNDTAGSPNTATR--T 1283
CS XXX
Vrg<-*
V++
gi|3449591 1284 VSF 1286
Wzy_C: domain 3 of 3, from 1251 to 1267: score 1.0, E = 20
*->dssnggRldiWeaalnm<-*
+s++++ l+ W+aal++
gi|3449591 1251 SSGATATLAQWQAALQA 1267
DUF2134: domain 1 of 2, from 1325 to 1342: score 3.5, E = 1.8
*->f.G.l.ppsrtlsAtAtA<-*
++G ++ +++t++ tA+A
gi|3449591 1325 SdGiTdDNTPTVTGTAVA 1342
Cna_B: domain 1 of 1, from 1341 to 1363: score 3.4, E = 1.7
CS -TT-EEEEEETTEEE E--TTSE
*->LeGAeftLldkdgnv.tTdenGk<-*
++G ++t++ ++ v+tT +nG+
gi|3449591 1341 VAGSTVTIYVDGVAVdTTTANGS 1363
DUF2134: domain 2 of 2, from 1426 to 1443: score 5.2, E = 0.53
*->f.G.l.ppsrtlsAtAtA<-*
++G+++++++t++ tA A
gi|3449591 1426 SdGkTsNNQPTVQGTAEA 1443
A2M_N: domain 1 of 1, from 1439 to 1481: score 0.5, E = 5.4
CS CSSEEE-EEEEE............ ....S-SS-EEEEEEE...EES
*->ggpvegvcVqllsrnnqvsdcggk.latgtTDadGevtftvslsldh
g ++++ +V+++ +g+ ++t+t D+ G +t +++ sl++
gi|3449591 1439 GTAEANSTVTVY--------VDGTaVGTATADGSGAWTYNLTSSLSE 1477
CS SS -
pl.r<-*
++++
gi|3449591 1478 GNhS 1481
CARDB: domain 1 of 1, from 1441 to 1460: score 3.1, E = 3.7
*->asgsftvrlYvdGtsvlsgtvt<-*
a ++tv++YvdGt v gt+t
gi|3449591 1441 AEANSTVTVYVDGTAV--GTAT 1460
HYR: domain 1 of 2, from 1472 to 1492: score 8.5, E = 0.065
*->GdfFpvGEettVtYtatDnaGN<-*
++++++G +++++tatD+aGN
gi|3449591 1472 TSSLSEG-NHSIRATATDAAGN 1492
PKD: domain 4 of 5, from 1475 to 1504: score 5.6, E = 0.34
CS SS....SEEEEEEEEEEETTCEEEEEE EEEEE
*->skgsVtpGtYtVtLtvsngvgsasatt..ttvtV<-*
++ +G+++++ t+++++g+ s ++++ ++tV
gi|3449591 1475 LS----EGNHSIRATATDAAGNISGQStgYNITV 1504
MucBP: domain 4 of 4, from 1479 to 1504: score 2.8, E = 5.2
*->gq.vTptlkdtlpvnvtYtfngtiqtV<-*
+++ +t +d +n++++ +g ++tV
gi|3449591 1479 NHsIRATATDA-AGNISGQSTGYNITV 1504
Galactosyl_T_2: domain 1 of 1, from 1499 to 1510: score -0.5, E = 9.4
*->YtnITVdigalpe<-*
++nITVd a+p
gi|3449591 1499 GYNITVDT-AAPQ 1510
HYR: domain 2 of 2, from 1504 to 1555: score 4.7, E = 0.89
*->vDttPPtvenCPnnivrtvelGts....gvnVfftePtAsDnsGgiq
vDt P+v ++v+ ++l+t+ ++ + +V+ft P A ++ +
gi|3449591 1504 VDTAAPQV----QSVVAGAPLDTTasslSYQVTFTKPVAGFAAD--S 1544
ailisrtaqpG<-*
+l++ ++ G
gi|3449591 1545 LSLVTSGSAHG 1555
PKD: domain 5 of 5, from 1560 to 1590: score 0.4, E = 14
CS EEESS....SEEEEEEEEEEETTCEEEEEEEEEEE
*->HtYskgsVtpGtYtVtLtvsngvgsasattttvtV<-*
+t ++ ++tY V+Lt g+gs s+ ++ V
gi|3449591 1560 VTALN----ATTYVVQLTGVGGAGSLSLAIKNSMV 1590
DUF1527: domain 1 of 1, from 1608 to 1635: score 2.8, E = 0.86
*->rlraaialllllaptasaA.lnTaaIva<-*
r++a ++ + +++p asaA+++Ta++++
gi|3449591 1608 RVSAPVVSNNVVPPVASAApTTTASVIQ 1635
FMN_red: domain 1 of 1, from 1649 to 1674: score 0.6, E = 9.7
CS ...........TCCSHHHHHHHHHHHH
*->gptgafqdPalekqdavakellkelle<-*
g+t+a ++ +e+ d +a++ll+e+++
gi|3449591 1649 GGTPAVATG-SEHADNAAQNLLAEATH 1674
Memo: domain 1 of 1, from 1671 to 1683: score 0.1, E = 5
*->ePavAGsfYpedp<-*
e+++AGs+ +++p
gi|3449591 1671 EATHAGSSANANP 1683
FAD_binding_2: domain 1 of 1, from 1681 to 1689: score -0.6, E = 7
CS TS--TTSHH
*->anrlgGnsL<-*
an+lg n+L
gi|3449591 1681 ANPLGANGL 1689
DAG1: domain 1 of 1, from 1724 to 1765: score -1.3, E = 6.4
CS XXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX..X..XXXXXXX
*->vGraFrlhvptellassedqGiikiseadKdgheLkapswLhwd<-*
+G++F + p+ ++ e ++ i + +g L p+wL++d
gi|3449591 1724 SGQSFSIALPPATIITRESSANLSIVARQSNGQPL--PAWLKFD 1765
He_PIG: domain 1 of 1, from 1747 to 1796: score 16.1, E = 0.00085
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGt.Ptptvq
+ + + + g +LP++L +d+ tGr+tG P+
gi|3449591 1747 SIVA------------RQSNGQPLPAWLKFDPGTGRFTGQaPAGWNK 1781
pGsytftvtatdgsg<-*
p s +++v+ +g+
gi|3449591 1782 PVSIDIRVQDKTGHH 1796
//