hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            34499589.fa
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Query sequence: gi|34499589|ref|NP_903804.1|
Accession:      [none]
Description:    hypothetical protein CV_4134 [Chromobacterium violaceum ATCC 12472]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Adeno_52K       Adenoviral protein 52K                    1.3        1.8   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Adeno_52K         1/1     124   132 ..   352   360 .]     1.3      1.8

Alignments of top-scoring domains:
Adeno_52K: domain 1 of 1, from 124 to 132: score 1.3, E = 1.8
                   *->sLrrALesr<-*
                      +Lr+AL++r
  gi|3449958   124    QLRNALTGR    132

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