hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 37527201.fa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query sequence: gi|37527201|ref|NP_930545.1|
Accession: [none]
Description: hypothetical protein plu3324 [Photorhabdus luminescens subsp. laumondii TTO1]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
RtxA RtxA repeat 703.4 7e-209 49
HemolysinCabind Hemolysin-type calcium-binding repeat 24.5 3e-06 9
Glyco_hydro_16 Glycosyl hydrolases family 16 12.9 0.0022 2
Ring_hydroxyl_B Ring hydroxylating beta subunit 11.3 0.0078 1
Big_2 Bacterial Ig-like domain (group 2) 8.5 0.086 1
PhageMin_Tail Phage-related minor tail protein 7.8 0.12 2
DUF1022 Protein of unknown function (DUF1022) 4.7 0.27 1
GBS_Bsp-like GBS Bsp-like repeat 6.1 0.29 2
Methyltransf_5 MraW methylase family 3.9 0.38 1
mRNA_cap_enzyme mRNA capping enzyme, catalytic domain 1.4 0.42 1
DUF981 Protein of unknown function (DUF981) 4.3 0.53 2
SPOR Sporulation related domain 5.1 0.73 1
Rep_fac_C Replication factor C 5.4 0.73 1
DUF2331 Uncharacterized protein conserved in 2.6 0.83 1
APG12 Ubiquitin-like autophagy protein Apg1 3.9 0.84 1
SOR Sulphur oxygenase reductase 3.1 0.9 1
HIM Haemagglutinin 6.1 0.98 2
DRP Dam-replacing family 2.1 1.1 1
ApbA Ketopantoate reductase PanE/ApbA 3.6 1.2 1
Corona_NS3b ORF3b coronavirus protein 1.2 1.5 1
FLILHELTA Hypothetical protein FLILHELTA 4.2 1.5 1
DegV Uncharacterised protein, DegV family 3.3 1.5 1
Flavodoxin_2 Flavodoxin-like fold 2.7 1.8 1
Spore_III_AE Stage III sporulation protein AE (spo 2.8 2 1
Adeno_shaft Adenoviral fibre protein (repeat/shaf 5.7 2.1 2
PCMT Protein-L-isoaspartate(D-aspartate) O 2.5 2.2 2
BSP Plant Basic Secretory Protein 1.2 2.3 1
Sec_GG SecD/SecF GG Motif 4.2 2.4 2
DUF904 Protein of unknown function (DUF904) 3.1 2.4 1
AntA AntA/AntB antirepressor 2.6 2.5 1
FbpA Fibronectin-binding protein A N-termi 0.7 3.2 1
K-box K-box region 2.7 3.3 1
FTP Fungalysin/Thermolysin Propeptide Mot 3.8 3.4 1
DUF2051 Double stranded RNA binding protein ( 1.5 3.4 1
H2TH Formamidopyrimidine-DNA glycosylase H 1.6 3.8 1
R_equi_Vir Rhodococcus equi virulence-associated 1.2 4.1 1
DUF1773 Protein of unknown function DUF1773 2.3 4.1 1
Transketolase_C Transketolase, C-terminal domain 2.3 4.5 1
DUF465 Protein of unknown function (DUF465) 3.4 4.9 1
GvpD GvpD gas vesicle protein 0.0 5 1
MSP1_C Merozoite surface protein 1 (MSP1) C- -0.8 5.2 1
DUF1997 Protein of unknown function (DUF1997) 1.4 5.3 1
XLF XLF (XRCC4-like factor) 1.6 5.3 1
SRX SRX 1.1 5.4 1
Glyco_hydro_42C Beta-galactosidase C-terminal domain 2.9 5.4 1
SOR_SNZ SOR/SNZ family -0.1 5.5 1
53-BP1_Tudor Tumour suppressor p53-binding protein 0.5 5.6 1
DUF336 Domain of unknown function (DUF336) 2.1 5.6 1
Flavodoxin_NdrI NrdI Flavodoxin like 1.8 5.7 1
DUF91 Protein of unknown function DUF91 1.1 5.9 1
GDPD Glycerophosphoryl diester phosphodies -0.4 5.9 1
ApbE ApbE family 0.8 5.9 1
DUF752 Protein of unknown function (DUF752) 1.5 5.9 1
CysG_dimeriser Sirohaem synthase dimerisation region 2.7 6 1
Flagellar_rod Paraflagellar rod protein 0.8 6.2 1
SelB-wing_3 Elongation factor SelB, winged helix 2.5 6.2 1
DUF1322 Protein of unknown function (DUF1322) 1.8 6.5 1
DUF2151 Uncharacterized conserved protein (DU -1.9 6.6 1
WHEP-TRS WHEP-TRS domain 1.7 6.7 1
Peptidase_C36 Beet necrotic yellow vein furovirus-t 0.3 6.9 1
Cas_TM1812 CRISPR-associated protein (cas_TM1812 0.6 7 1
DUF2292 Uncharacterized small protein (DUF229 2.4 7 1
Trp_dioxygenase Tryptophan 2,3-dioxygenase -0.4 7.2 1
DNA_mis_repair DNA mismatch repair protein, C-termin 1.5 7.4 1
Hep_Hag Hep_Hag 3.7 7.4 2
SVS_QK Seminal vesicle protein repeat 4.4 7.4 1
Copper-fist Copper fist DNA binding domain 1.7 7.4 1
Lycopene_cycl Lycopene cyclase protein -0.3 7.8 1
FYTT Forty-two-three protein -0.7 8 1
DUF1094 Protein of unknown function (DUF1094) 1.6 8.1 1
WXG100 Proteins of 100 residues with WXG 2.0 8.2 1
Saf-Nte_pilin Saf-pilin pilus formation protein 0.9 8.2 1
Cna_B Cna protein B-type domain 1.1 8.4 1
Enhancin Viral enhancin protein -0.4 8.6 1
DUF1786 Putative pyruvate format-lyase activa -1.0 8.8 1
Glyco_hydro_3 Glycosyl hydrolase family 3 N termina 0.1 8.8 1
TTKRSYEDQ Predicted coiled-coil domain-containi -1.8 8.9 1
Nop25 Nucleolar protein 12 (25kDa) 0.5 8.9 1
GSH-S_ATP Prokaryotic glutathione synthetase, A 0.6 9 1
Mu-transpos_C Mu transposase, C-terminal 2.0 9.1 1
GET2 GET complex subunit GET2 -0.8 9.2 1
CHAD CHAD domain 0.6 9.2 1
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/i -0.6 9.2 1
UPF0020 Putative RNA methylase family UPF0020 0.2 9.3 1
Ribosomal_L28e Ribosomal L28e protein family 0.8 9.4 1
Arrestin_N Arrestin (or S-antigen), N-terminal d 0.8 9.4 1
Filo_VP35 Filoviridae VP35 -0.5 9.4 1
Attacin_N Attacin, N-terminal region 2.1 9.5 1
Legionella_OMP Legionella pneumophila major outer me -0.3 9.5 1
CRM1_C CRM1 C terminal -0.4 9.7 1
PSCyt3 Protein of unknown function (DUF1588) 1.0 9.8 1
Peptidase_S15 X-Pro dipeptidyl-peptidase (S15 famil -1.1 9.8 1
RVP_2 Retroviral aspartyl protease 0.3 9.9 1
Herpes_UL46 Herpesvirus UL46 protein -0.9 9.9 1
DUF2277 Uncharacterized conserved protein (DU 0.8 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
HemolysinCabind 1/9 35 44 .. 9 18 .] 0.4 59
FYTT 1/1 36 47 .. 305 316 .] -0.7 8
Rep_fac_C 1/1 37 53 .. 76 92 .] 5.4 0.73
HemolysinCabind 2/9 54 67 .. 1 14 [. 0.4 58
ApbE 1/1 71 82 .. 153 164 .. 0.8 5.9
RtxA 1/49 82 99 .. 1 19 [] 14.2 0.0049
RtxA 2/49 101 119 .. 1 19 [] 14.7 0.0035
GDPD 1/1 110 117 .. 1 8 [. -0.4 5.9
RtxA 3/49 121 139 .. 1 19 [] 19.7 0.00011
RtxA 4/49 141 159 .. 1 19 [] 16.6 0.00093
R_equi_Vir 1/1 141 150 .. 189 200 .] 1.2 4.1
PSCyt3 1/1 158 179 .. 90 104 .] 1.0 9.8
RtxA 5/49 161 185 .. 1 19 [] 12.6 0.015
HemolysinCabind 3/9 177 194 .. 1 18 [] 4.2 4.3
Lycopene_cycl 1/1 183 192 .. 1 11 [. -0.3 7.8
RtxA 6/49 187 205 .. 1 19 [] 16.0 0.0014
RtxA 7/49 207 225 .. 1 19 [] 19.9 9.9e-05
DRP 1/1 251 262 .. 245 256 .] 2.1 1.1
RtxA 8/49 255 273 .. 1 19 [] 15.4 0.0021
RtxA 9/49 275 293 .. 1 19 [] 15.8 0.0016
Glyco_hydro_42C 1/1 318 335 .. 1 20 [. 2.9 5.4
GvpD 1/1 330 348 .. 203 221 .. 0.0 5
SOR 1/1 337 354 .. 1 18 [. 3.1 0.9
mRNA_cap_enzyme 1/1 405 420 .. 1 17 [. 1.4 0.42
DegV 1/1 469 484 .. 1 16 [. 3.3 1.5
Hep_Hag 1/2 520 535 .. 1 16 [. 0.3 62
RtxA 10/49 579 597 .. 1 19 [] 13.4 0.0083
RtxA 11/49 599 617 .. 1 19 [] 15.6 0.0019
Flavodoxin_NdrI 1/1 606 616 .. 1 11 [. 1.8 5.7
RtxA 12/49 619 637 .. 1 19 [] 20.7 5.6e-05
RtxA 13/49 639 657 .. 1 19 [] 17.2 0.00063
Ring_hydroxyl_B 1/1 643 677 .. 107 146 .. 11.3 0.0078
RtxA 14/49 659 677 .. 1 19 [] 15.8 0.0016
PCMT 1/2 661 674 .. 135 154 .. 1.8 3.4
Mu-transpos_C 1/1 665 678 .. 65 81 .] 2.0 9.1
SelB-wing_3 1/1 665 676 .. 39 50 .] 2.5 6.2
Cas_TM1812 1/1 670 680 .. 239 249 .] 0.6 7
RtxA 15/49 679 695 .. 2 19 .] 0.1 77
RtxA 16/49 697 710 .. 1 14 [. 5.4 2.1
RtxA 17/49 716 734 .. 1 19 [] 16.2 0.0012
Sec_GG 1/2 735 751 .. 18 34 .] 0.6 29
RtxA 18/49 736 752 .. 2 19 .] 6.8 0.79
RtxA 19/49 754 771 .. 1 18 [. 12.8 0.013
RtxA 20/49 777 795 .. 1 19 [] 20.0 8.9e-05
DUF1786 1/1 796 802 .. 1 7 [. -1.0 8.8
RtxA 21/49 796 814 .. 1 19 [] 16.2 0.0012
RtxA 22/49 815 832 .. 1 19 [] 17.8 0.00042
Sec_GG 2/2 817 831 .. 20 34 .] 3.6 3.6
RtxA 23/49 834 852 .. 1 19 [] 19.2 0.00016
RtxA 24/49 853 871 .. 1 19 [] 14.9 0.0031
Spore_III_AE 1/1 868 879 .. 317 328 .] 2.8 2
DUF981 1/2 869 885 .. 222 242 .] 2.7 1.6
RtxA 25/49 872 890 .. 1 19 [] 15.9 0.0015
RtxA 26/49 891 909 .. 1 19 [] 15.4 0.0022
Filo_VP35 1/1 900 911 .. 325 336 .] -0.5 9.4
DUF981 2/2 907 923 .. 222 242 .] 1.6 3.1
RtxA 27/49 910 928 .. 1 19 [] 16.5 0.001
PCMT 2/2 929 943 .. 139 153 .. 0.7 7.1
RtxA 28/49 929 947 .. 1 19 [] 15.7 0.0017
HIM 1/2 930 948 .. 6 24 .] 2.4 14
FbpA 1/1 941 951 .. 1 11 [. 0.7 3.2
RtxA 29/49 948 966 .. 1 19 [] 21.1 4.2e-05
RtxA 30/49 967 983 .. 1 19 [] 15.5 0.002
Transketolase_C 1/1 969 990 .. 1 24 [. 2.3 4.5
Glyco_hydro_3 1/1 976 984 .. 235 243 .] 0.1 8.8
RtxA 31/49 986 1004 .. 1 19 [] 16.1 0.0013
GBS_Bsp-like 1/2 992 1011 .. 76 97 .] 4.1 1.2
PhageMin_Tail 1/2 1002 1026 .. 201 227 .] 3.1 2.3
RtxA 32/49 1006 1023 .. 2 19 .] 12.4 0.017
RtxA 33/49 1024 1041 .. 1 19 [] 10.7 0.056
RtxA 34/49 1043 1060 .. 1 19 [] 15.3 0.0022
RtxA 35/49 1062 1080 .. 1 19 [] 15.9 0.0015
RtxA 36/49 1082 1099 .. 2 19 .] 10.2 0.077
RtxA 37/49 1105 1119 .. 5 19 .] 10.1 0.08
GBS_Bsp-like 2/2 1109 1126 .. 79 97 .] 2.0 4.9
RtxA 38/49 1120 1138 .. 1 19 [] 19.5 0.00012
RtxA 39/49 1139 1157 .. 1 19 [] 16.9 0.00074
RtxA 40/49 1158 1176 .. 1 19 [] 16.5 0.001
ApbA 1/1 1168 1199 .. 138 170 .] 3.6 1.2
RtxA 41/49 1179 1195 .. 3 19 .] 10.4 0.066
Glyco_hydro_16 1/2 1189 1214 .. 1 30 [. 4.9 0.49
RtxA 42/49 1196 1214 .. 1 19 [] 23.4 8.7e-06
DUF2051 1/1 1199 1516 .. 335 409 .. 1.5 3.4
RtxA 43/49 1215 1233 .. 1 19 [] 11.7 0.027
Glyco_hydro_16 2/2 1227 1254 .. 1 34 [. 8.1 0.058
Adeno_shaft 1/2 1237 1270 .. 1 30 [] 4.4 4.7
RtxA 44/49 1237 1252 .. 4 19 .] 7.0 0.7
Big_2 1/1 1253 1273 .. 69 90 .] 8.5 0.086
RtxA 45/49 1253 1271 .. 1 19 [] 14.4 0.0043
Attacin_N 1/1 1266 1273 .. 60 67 .] 2.1 9.5
RtxA 46/49 1274 1290 .. 3 19 .] 4.9 3
HIM 2/2 1278 1291 .. 11 24 .] 3.7 5.2
BSP 1/1 1285 1295 .. 237 249 .] 1.2 2.3
RtxA 47/49 1291 1309 .. 1 19 [] 15.9 0.0016
Adeno_shaft 2/2 1296 1308 .. 18 30 .] 1.3 35
RtxA 48/49 1310 1328 .. 1 19 [] 8.0 0.35
Legionella_OMP 1/1 1321 1345 .. 191 212 .. -0.3 9.5
DUF904 1/1 1347 1369 .. 73 95 .] 3.1 2.4
APG12 1/1 1366 1384 .. 31 49 .. 3.9 0.84
WHEP-TRS 1/1 1466 1478 .. 11 23 .. 1.7 6.7
SOR_SNZ 1/1 1467 1518 .. 157 208 .] -0.1 5.5
K-box 1/1 1477 1506 .. 1 31 [. 2.7 3.3
MSP1_C 1/1 1573 1594 .. 563 582 .] -0.8 5.2
Arrestin_N 1/1 1599 1616 .. 156 173 .] 0.8 9.4
Nop25 1/1 1634 1650 .. 223 239 .] 0.5 8.9
Methyltransf_5 1/1 1818 1833 .. 310 325 .] 3.9 0.38
Flagellar_rod 1/1 1836 1857 .. 1 22 [. 0.8 6.2
SVS_QK 1/1 1938 1949 .. 1 12 [] 4.4 7.4
DUF465 1/1 1959 1973 .. 50 64 .] 3.4 4.9
DUF752 1/1 2048 2060 .. 1 13 [. 1.5 5.9
DUF336 1/1 2077 2096 .. 1 20 [. 2.1 5.6
DUF1997 1/1 2106 2116 .. 179 189 .] 1.4 5.3
FLILHELTA 1/1 2119 2141 .. 65 88 .. 4.2 1.5
DUF1322 1/1 2122 2144 .. 1 24 [. 1.8 6.5
DUF1773 1/1 2173 2184 .. 1 13 [. 2.3 4.1
3Beta_HSD 1/1 2293 2299 .. 1 7 [. -0.6 9.2
Corona_NS3b 1/1 2320 2375 .. 1 57 [. 1.2 1.5
Flavodoxin_2 1/1 2341 2373 .. 195 227 .] 2.7 1.8
CysG_dimeriser 1/1 2366 2377 .. 1 12 [. 2.7 6
SPOR 1/1 2472 2506 .. 17 51 .. 5.1 0.73
FTP 1/1 2485 2506 .. 30 51 .] 3.8 3.4
DUF2292 1/1 2487 2500 .. 25 38 .] 2.4 7
Ribosomal_L28e 1/1 2509 2517 .. 1 9 [. 0.8 9.4
DUF1094 1/1 2533 2549 .. 81 97 .] 1.6 8.1
DUF2331 1/1 2535 2549 .. 371 385 .] 2.6 0.83
Cna_B 1/1 2661 2682 .. 48 77 .] 1.1 8.4
53-BP1_Tudor 1/1 2701 2714 .. 20 33 .. 0.5 5.6
Hep_Hag 2/2 2730 2743 .. 1 14 [. 3.4 9.2
RtxA 49/49 2737 2754 .. 1 19 [] 7.1 0.64
Saf-Nte_pilin 1/1 2756 2763 .. 139 146 .] 0.9 8.2
Enhancin 1/1 2790 2802 .. 1 13 [. -0.4 8.6
DUF1022 1/1 2800 2818 .. 366 389 .] 4.7 0.27
DUF2277 1/1 2836 2852 .. 22 38 .. 0.8 9.9
CHAD 1/1 2838 2881 .. 232 275 .] 0.6 9.2
TTKRSYEDQ 1/1 2876 2892 .. 37 53 .. -1.8 8.9
WXG100 1/1 2904 2913 .. 81 90 .] 2.0 8.2
GSH-S_ATP 1/1 2947 2967 .. 54 74 .. 0.6 9
GET2 1/1 2953 2959 .. 324 330 .] -0.8 9.2
PhageMin_Tail 2/2 2984 3004 .. 205 227 .] 4.6 0.87
UPF0020 1/1 3016 3039 .. 157 181 .. 0.2 9.3
DNA_mis_repair 1/1 3023 3046 .. 1 29 [. 1.5 7.4
CRM1_C 1/1 3034 3039 .. 323 328 .] -0.4 9.7
SRX 1/1 3040 3052 .. 1 15 [. 1.1 5.4
H2TH 1/1 3055 3070 .. 96 111 .] 1.6 3.8
Trp_dioxygenase 1/1 3095 3108 .. 1 15 [. -0.4 7.2
XLF 1/1 3138 3162 .. 167 207 .] 1.6 5.3
DUF91 1/1 3147 3156 .. 225 234 .] 1.1 5.9
HemolysinCabind 4/9 3193 3205 .. 6 18 .] 1.6 25
HemolysinCabind 5/9 3215 3221 .. 1 7 [. 1.8 22
HemolysinCabind 6/9 3233 3240 .. 1 8 [. 2.1 18
Herpes_UL46 1/1 3269 3285 .. 495 511 .] -0.9 9.9
AntA 1/1 3272 3298 .. 31 64 .. 2.6 2.5
HemolysinCabind 7/9 3319 3331 .. 6 18 .] 8.1 0.28
HemolysinCabind 8/9 3340 3349 .. 9 18 .] 4.6 3.2
Peptidase_C36 1/1 3342 3352 .. 94 104 .] 0.3 6.9
HemolysinCabind 9/9 3361 3369 .. 10 18 .] 1.3 33
RVP_2 1/1 3392 3405 .. 1 14 [. 0.3 9.9
Copper-fist 1/1 3406 3414 .. 1 9 [. 1.7 7.4
Peptidase_S15 1/1 3438 3455 .. 79 93 .. -1.1 9.8
DUF2151 1/1 3457 3472 .. 789 804 .] -1.9 6.6
Alignments of top-scoring domains:
HemolysinCabind: domain 1 of 9, from 35 to 44: score 0.4, E = 59
CS EEEESSCGEE
*->LyGgaGnDtl<-*
+y +GnD +
gi|3752720 35 IYAKGGNDHI 44
FYTT: domain 1 of 1, from 36 to 47: score -0.7, E = 8
*->FsKGGsRFvtvG<-*
+ KGG +tvG
gi|3752720 36 YAKGGNDHITVG 47
Rep_fac_C: domain 1 of 1, from 37 to 53: score 5.4, E = 0.73
CS HTTT--HHHHHHHHHHH
*->sdGaseyiQLsaLlaai<-*
++G++++i ++L a+i
gi|3752720 37 AKGGNDHITVGSLGATI 53
HemolysinCabind: domain 2 of 9, from 54 to 67: score 0.4, E = 58
CS E--SSS-EEEEESS
*->yGGaGnDtLyGgaG<-*
y G+ t +GgaG
gi|3752720 54 YASSGDKTVDGGAG 67
ApbE: domain 1 of 1, from 71 to 82: score 0.8, E = 5.9
*->lVeiGGdiralG<-*
+V+iGGd+ ++G
gi|3752720 71 IVNIGGDLKVHG 82
RtxA: domain 1 of 49, from 82 to 99: score 14.2, E = 0.0049
*->GaGgaNvitkvGdggdlaf<-*
Ga+g++ i+k G +g+++f
gi|3752720 82 GAAGYASIDKNG-NGNISF 99
RtxA: domain 2 of 49, from 101 to 119: score 14.7, E = 0.0035
*->GaGgaNvitkvGdggdlaf<-*
Ga+g+ ++++G++g+l+f
gi|3752720 101 GAAGGVSMDHRGSSGNLNF 119
GDPD: domain 1 of 1, from 110 to 117: score -0.4, E = 5.9
CS CTTTTTTS
*->HRGasgsy<-*
HRG+sg++
gi|3752720 110 HRGSSGNL 117
RtxA: domain 3 of 49, from 121 to 139: score 19.7, E = 0.00011
*->GaGgaNvitkvGdggdlaf<-*
Ga+++N++ ++G++g+++f
gi|3752720 121 GAAAYNNLSRRGQSGNVTF 139
RtxA: domain 4 of 49, from 141 to 159: score 16.6, E = 0.00093
*->GaGgaNvitkvGdggdlaf<-*
G+Gg+N +++ ++gdl+f
gi|3752720 141 GIGGYNGLWHETHQGDLNF 159
R_equi_Vir: domain 1 of 1, from 141 to 150: score 1.2, E = 4.1
*->GWHIGGGtGgWh<-*
G IGG +G Wh
gi|3752720 141 G--IGGYNGLWH 150
PSCyt3: domain 1 of 1, from 158 to 179: score 1.0, E = 9.8
*->nFDaiGr.......WRdqedgg<-*
nF+a+G++++ +++W+d+++g+
gi|3752720 158 NFNAAGAgnkidrtWHDRYEGS 179
RtxA: domain 5 of 49, from 161 to 185: score 12.6, E = 0.015
*->GaGgaNvitkv......Gdggdlaf<-*
+aG++N+i+++ +++ +G+ g+++f
gi|3752720 161 AAGAGNKIDRTwhdryeGSKGNVIF 185
HemolysinCabind: domain 3 of 9, from 177 to 194: score 4.2, E = 4.3
CS E--SSS-EEEEESSCGEE
*->yGGaGnDtLyGgaGnDtl<-*
G +Gn + Gg+ ++ +
gi|3752720 177 EGSKGNVIFVGGGAANSI 194
Lycopene_cycl: domain 1 of 1, from 183 to 192: score -0.3, E = 7.8
*->DlvivGaGlAG<-*
+++vG+G+A+
gi|3752720 183 -VIFVGGGAAN 192
RtxA: domain 6 of 49, from 187 to 205: score 16.0, E = 0.0014
*->GaGgaNvitkvGdggdlaf<-*
G+G+aN i +++++g+++f
gi|3752720 187 GGGAANSISSRVESGNIEF 205
RtxA: domain 7 of 49, from 207 to 225: score 19.9, E = 9.9e-05
*->GaGgaNvitkvGdggdlaf<-*
GaG+ N+i ++G++g+++f
gi|3752720 207 GAGVDNHIIRKGKEGNIIF 225
DRP: domain 1 of 1, from 251 to 262: score 2.1, E = 1.1
*->IEFkGRGkYkKl<-*
IEF G G Y K+
gi|3752720 251 IEFEGAGGYNKV 262
RtxA: domain 8 of 49, from 255 to 273: score 15.4, E = 0.0021
*->GaGgaNvitkvGdggdlaf<-*
GaGg+N++++ ++g++ f
gi|3752720 255 GAGGYNKVYSDIAHGNIRF 273
RtxA: domain 9 of 49, from 275 to 293: score 15.8, E = 0.0016
*->GaGgaNvitkvGdggdlaf<-*
G Gg+N i ++G++ d++
gi|3752720 275 GSGGYNEISRIGEDSDSYN 293
Glyco_hydro_42C: domain 1 of 1, from 318 to 335: score 2.9, E = 5.4
CS TEEEEE......ETTEEEEE
*->gvevqrIRvenergrylFvf<-*
v++++ ++ e+++ylF+f
gi|3752720 318 QVTAIK--STTESNTYLFAF 335
GvpD: domain 1 of 1, from 330 to 348: score 0.0, E = 5
*->sYmftLADGqFksitrveL<-*
+Y+f ADG++ i +v+L
gi|3752720 330 TYLFAFADGKYTKISKVQL 348
SOR: domain 1 of 1, from 337 to 354: score 3.1, E = 0.9
*->pkpyvAINmakvkNePkt<-*
+ y I ++++kN+Pkt
gi|3752720 337 DGKYTKISKVQLKNDPKT 354
mRNA_cap_enzyme: domain 1 of 1, from 405 to 420: score 1.4, E = 0.42
CS EEEE--CHCHHCHHHHS
*->qPvSfsraenlklLkqk<-*
qPv++++ +++ L+++
gi|3752720 405 QPVTIQH-TVEEDLREN 420
DegV: domain 1 of 1, from 469 to 484: score 3.3, E = 1.5
CS HHHHHHHTT-SEEEEE
*->eafelleegydhvisi<-*
+++++++e+y++v+++
gi|3752720 469 YVYAKYVESYTKVVVV 484
Hep_Hag: domain 1 of 2, from 520 to 535: score 0.3, E = 62
CS ECSTT-EEESTT-EE-
*->AtganStAiGsnakAs<-*
A+g +S+ +G+++ ++
gi|3752720 520 ANGYSSMEVGGYSLTN 535
RtxA: domain 10 of 49, from 579 to 597: score 13.4, E = 0.0083
*->GaGgaNvitkvGdggdlaf<-*
G+Gg+N i +++ +g+++f
gi|3752720 579 GMGGGNLIKSSVINGNVNF 597
RtxA: domain 11 of 49, from 599 to 617: score 15.6, E = 0.0019
*->GaGgaNvitkvGdggdlaf<-*
G G aNvi +++++g+++f
gi|3752720 599 GDGIANVILHSSRSGNTHF 617
Flavodoxin_NdrI: domain 1 of 1, from 606 to 616: score 1.8, E = 5.7
CS EEE--SSSHHH
*->vyysSisGNTh<-*
+ sS sGNTh
gi|3752720 606 ILHSSRSGNTH 616
RtxA: domain 12 of 49, from 619 to 637: score 20.7, E = 5.6e-05
*->GaGgaNvitkvGdggdlaf<-*
GaG+aN+i k+G +g+l+f
gi|3752720 619 GAGAANIIEKSGIDGNLTF 637
RtxA: domain 13 of 49, from 639 to 657: score 17.2, E = 0.00063
*->GaGgaNvitkvGdggdlaf<-*
GaG aNv+++ +++g++++
gi|3752720 639 GAGLANVLVHQSRNGEMDV 657
Ring_hydroxyl_B: domain 1 of 1, from 643 to 677: score 11.3, E = 0.0078
CS EEEEEEEEETT.TEEEEEEEEEEEEEEE-SST-..EEEEE
*->SnflvyRnRlevrtvdvfaGereDvLRrsgdggsgfrIar<-*
+n+lv+ +R++ + dv+aG++ vL r gdg +ar
gi|3752720 643 ANVLVHQSRNG--EMDVYAGGAANVLVRVGDG---RYLAR 677
RtxA: domain 14 of 49, from 659 to 677: score 15.8, E = 0.0016
*->GaGgaNvitkvGdggdlaf<-*
++G+aNv+++vGdg +la
gi|3752720 659 AGGAANVLVRVGDGRYLAR 677
PCMT: domain 1 of 2, from 661 to 674: score 1.8, E = 3.4
CS CTH.HHHTTSEEEEES-GGG
*->glealLksGnVivvvGDGrq<-*
g++ nV+v+vGDGr+
gi|3752720 661 GAA------NVLVRVGDGRY 674
Mu-transpos_C: domain 1 of 1, from 665 to 678: score 2.0, E = 9.1
*->VlVyrqdGNeerflceA<-*
VlV+ +dG r+l++
gi|3752720 665 VLVRVGDG---RYLARL 678
SelB-wing_3: domain 1 of 1, from 665 to 676: score 2.5, E = 6.2
*->lTRRvGDkRvLR<-*
+++RvGD R L+
gi|3752720 665 VLVRVGDGRYLA 676
Cas_TM1812: domain 1 of 1, from 670 to 680: score 0.6, E = 7
*->GdarplasLlk<-*
Gd+r+la+Ll
gi|3752720 670 GDGRYLARLLA 680
RtxA: domain 15 of 49, from 679 to 695: score 0.1, E = 77
*->aGgaNvitkvGdggdlaf<-*
++ +N+ + G +gd+ +
gi|3752720 679 LAIGNISIHQG-NGDSRV 695
RtxA: domain 16 of 49, from 697 to 710: score 5.4, E = 2.1
*->GaGgaNvitkvGdg<-*
++Gg+N t++G+g
gi|3752720 697 MLGGYNTHTQIGKG 710
RtxA: domain 17 of 49, from 716 to 734: score 16.2, E = 0.0012
*->GaGgaNvitkvGdggdlaf<-*
GaGg Nv+t++G+g +++
gi|3752720 716 GAGGFNVMTQKGKGSISSL 734
Sec_GG: domain 1 of 2, from 735 to 751: score 0.6, E = 29
*->lkGGtrillkvdksvtq<-*
l GG+++l+k+ +
gi|3752720 735 LLGGANVLTKLGGDNLV 751
RtxA: domain 18 of 49, from 736 to 752: score 6.8, E = 0.79
*->aGgaNvitkvGdggdlaf<-*
+GgaNv+tk G g +l
gi|3752720 736 LGGANVLTKLG-GDNLVS 752
RtxA: domain 19 of 49, from 754 to 771: score 12.8, E = 0.013
*->GaGgaNvitkvGdggdla<-*
++GgaN+it+++ +++++
gi|3752720 754 MLGGANIITHISGDNEIS 771
RtxA: domain 20 of 49, from 777 to 795: score 20.0, E = 8.9e-05
*->GaGgaNvitkvGdggdlaf<-*
++GgaN++tk+G+g +a+
gi|3752720 777 ALGGANILTKKGRGDAVAL 795
DUF1786: domain 1 of 1, from 796 to 802: score -1.0, E = 8.8
*->MGGGPvT<-*
MGGG+++
gi|3752720 796 MGGGANV 802
RtxA: domain 21 of 49, from 796 to 814: score 16.2, E = 0.0012
*->GaGgaNvitkvGdggdlaf<-*
++GgaNv+t++G g ++ +
gi|3752720 796 MGGGANVLTHIGYGSTTGV 814
RtxA: domain 22 of 49, from 815 to 832: score 17.8, E = 0.00042
*->GaGgaNvitkvGdggdlaf<-*
++GgaN++tkvG +gd++
gi|3752720 815 MLGGANILTKVG-NGDTTG 832
Sec_GG: domain 2 of 2, from 817 to 831: score 3.6, E = 3.6
*->GGtrillkvdksvtq<-*
GG++il+kv + +t+
gi|3752720 817 GGANILTKVGNGDTT 831
RtxA: domain 23 of 49, from 834 to 852: score 19.2, E = 0.00016
*->GaGgaNvitkvGdggdlaf<-*
++G +Nv+t+vGd+++l +
gi|3752720 834 MLGIGNVLTHVGDDQTLGV 852
RtxA: domain 24 of 49, from 853 to 871: score 14.9, E = 0.0031
*->GaGgaNvitkvGdggdlaf<-*
+++++N+ tkvGdg +a+
gi|3752720 853 MGAAGNIFTKVGDGTAIAA 871
Spore_III_AE: domain 1 of 1, from 868 to 879: score 2.8, E = 2
*->aItIivgaGNit<-*
aI+ ++gaGNi
gi|3752720 868 AIAAMIGAGNIF 879
DUF981: domain 1 of 2, from 869 to 885: score 2.7, E = 1.6
*->lAlliGieAvfgHlnPasgfg<-*
+A+ iG++++f+H+ g g
gi|3752720 869 IAAMIGAGNIFTHV----GKG 885
RtxA: domain 25 of 49, from 872 to 890: score 15.9, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
++G++N+ t+vG+g a+
gi|3752720 872 MIGAGNIFTHVGKGDAWAL 890
RtxA: domain 26 of 49, from 891 to 909: score 15.4, E = 0.0022
*->GaGgaNvitkvGdggdlaf<-*
++G +N+ tkvGdg la+
gi|3752720 891 MGGLGNIFTKVGDGKALAL 909
Filo_VP35: domain 1 of 1, from 900 to 911: score -0.5, E = 9.4
*->qlqdGktlgLKI<-*
++ dGk+l+L I
gi|3752720 900 KVGDGKALALMI 911
DUF981: domain 2 of 2, from 907 to 923: score 1.6, E = 3.1
*->lAlliGieAvfgHlnPasgfg<-*
lAl i++++vf+H+ g g
gi|3752720 907 LALMIAAGNVFTHV----GNG 923
RtxA: domain 27 of 49, from 910 to 928: score 16.5, E = 0.001
*->GaGgaNvitkvGdggdlaf<-*
+++++Nv t+vG+g ++a+
gi|3752720 910 MIAAGNVFTHVGNGMSVAL 928
PCMT: domain 2 of 2, from 929 to 943: score 0.7, E = 7.1
CS HHHTTSEEEEES-GG
*->lLksGnVivvvGDGr<-*
+L Gn +++vGDG+
gi|3752720 929 MLAKGNIATKVGDGT 943
RtxA: domain 28 of 49, from 929 to 947: score 15.7, E = 0.0017
*->GaGgaNvitkvGdggdlaf<-*
+++++N+ tkvGdg +la+
gi|3752720 929 MLAKGNIATKVGDGTTLAA 947
HIM: domain 1 of 2, from 930 to 948: score 2.4, E = 14
CS E--S...-EETT-TT--CC
*->VasGeitvtktDAvnvsQL<-*
+a G+i ++++D+++ +++
gi|3752720 930 LAKGNIATKVGDGTTLAAM 948
FbpA: domain 1 of 1, from 941 to 951: score 0.7, E = 3.2
*->DGlflhAvveE<-*
DG++l+A++ E
gi|3752720 941 DGTTLAAMIGE 951
RtxA: domain 29 of 49, from 948 to 966: score 21.1, E = 4.2e-05
*->GaGgaNvitkvGdggdlaf<-*
++G+aNv+t+vG+g + a+
gi|3752720 948 MIGEANVMTHVGNGSTFAA 966
RtxA: domain 30 of 49, from 967 to 983: score 15.5, E = 0.002
*->GaGgaNvitkvGdggdlaf<-*
++G++N++tk G +dla+
gi|3752720 967 MIGQGNILTKAG--NDLAL 983
Transketolase_C: domain 1 of 1, from 969 to 990: score 2.3, E = 4.5
CS TEEEEE CSSSSEEEEETTCHHHHH
*->Gkaeil.reGdDvtivayGsmvheA<-*
G+++il++ G+D +a G mv eA
gi|3752720 969 GQGNILtKAGND---LALGLMVGEA 990
Glyco_hydro_3: domain 1 of 1, from 976 to 984: score 0.1, E = 8.8
*->nAGlDmeMp<-*
+AG+D++++
gi|3752720 976 KAGNDLALG 984
RtxA: domain 31 of 49, from 986 to 1004: score 16.1, E = 0.0013
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN+ +vGdg ++ +
gi|3752720 986 MVGEANIYSHVGDGTSIGL 1004
GBS_Bsp-like: domain 1 of 2, from 992 to 1011: score 4.1, E = 1.2
*->vYGysytdGkrvGvnlttGtqv<-*
+Y + dG+ +G+ +++ +v
gi|3752720 992 IY-SHVGDGTSIGLLAGK-LNV 1011
PhageMin_Tail: domain 1 of 2, from 1002 to 1026: score 3.1, E = 2.3
*->leelqkklkgltkddaqkaaalktlFG<-*
++ l++kl+ +t + +++++l+++FG
gi|3752720 1002 IGLLAGKLNVMT--KMGDGTTLAAMFG 1026
RtxA: domain 32 of 49, from 1006 to 1023: score 12.4, E = 0.017
*->aGgaNvitkvGdggdlaf<-*
aG+ Nv+tk+Gdg +la+
gi|3752720 1006 AGKLNVMTKMGDGTTLAA 1023
RtxA: domain 33 of 49, from 1024 to 1041: score 10.7, E = 0.056
*->GaGgaNvitkvGdggdlaf<-*
+ G+aN++t+ G +g + +
gi|3752720 1024 MFGEANIMTHYG-DGLTGV 1041
RtxA: domain 34 of 49, from 1043 to 1060: score 15.3, E = 0.0022
*->GaGgaNvitkvGdggdlaf<-*
++G+aN++tkvG g + +
gi|3752720 1043 ALGKANIVTKVG-KGFMGV 1060
RtxA: domain 35 of 49, from 1062 to 1080: score 15.9, E = 0.0015
*->GaGgaNvitkvGdggdlaf<-*
+a++aNv+t++G++ + a+
gi|3752720 1062 AAAEANVVTHMGASTTAAV 1080
RtxA: domain 36 of 49, from 1082 to 1099: score 10.2, E = 0.077
*->aGgaNvitkvGdggdlaf<-*
+G++N++tk G+g ++ +
gi|3752720 1082 LGKGNILTKEGSGTTVGL 1099
RtxA: domain 37 of 49, from 1105 to 1119: score 10.1, E = 0.08
*->aNvitkvGdggdlaf<-*
+N++t++Gdg ++ f
gi|3752720 1105 GNIMTHIGDGTTVGF 1119
GBS_Bsp-like: domain 2 of 2, from 1109 to 1126: score 2.0, E = 4.9
*->ysytdGkrvGvnlttGtqv<-*
++ dG++vG+++++ ++
gi|3752720 1109 THIGDGTTVGFAKGK-ANI 1126
RtxA: domain 38 of 49, from 1120 to 1138: score 19.5, E = 0.00012
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+itkvG+g +++
gi|3752720 1120 AKGKANIITKVGEGTGINA 1138
RtxA: domain 39 of 49, from 1139 to 1157: score 16.9, E = 0.00074
*->GaGgaNvitkvGdggdlaf<-*
+G+aN++t+vG+g +f
gi|3752720 1139 VWGEANILTHVGNGDRYNF 1157
RtxA: domain 40 of 49, from 1158 to 1176: score 16.5, E = 0.001
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+itkvG ++++
gi|3752720 1158 AKGKANIITKVGGMREVTV 1176
ApbA: domain 1 of 1, from 1168 to 1199: score 3.6, E = 1.2
CS EEEEE----EEEETTEEEE-S.---EEEEESSG
*->lgGvtthgatregpGhvhhtGvpGrtviGelpg<-*
+gG+ ++++++ + + + h G +G+ + G++
gi|3752720 1168 VGGMREVTVVQGDANIITHVG-NGDDYTGAWGK 1199
RtxA: domain 41 of 49, from 1179 to 1195: score 10.4, E = 0.066
*->GgaNvitkvGdggdlaf<-*
G aN+it+vG+g d +
gi|3752720 1179 GDANIITHVGNGDDYTG 1195
Glyco_hydro_16: domain 1 of 2, from 1189 to 1214: score 4.9, E = 0.49
CS SBTTBTTEE-GGGEEEE...TT...SEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtL<-*
+g+d++ wg+ nv + dG++++L
gi|3752720 1189 NGDDYTGAWGKANVITK---VG-DGNNVVL 1214
RtxA: domain 42 of 49, from 1196 to 1214: score 23.4, E = 8.7e-06
*->GaGgaNvitkvGdggdlaf<-*
++G+aNvitkvGdg+++ +
gi|3752720 1196 AWGKANVITKVGDGNNVVL 1214
DUF2051: domain 1 of 1, from 1199 to 1516: score 1.5, E = 3.4
*->eaqalksvGeGtLdkaeEvevkee..ivkkvgk..............
+a+++ vG+G + v+ k +iv +vg++++ + ++++
gi|3752720 1199 KANVITKVGDGNNV----VLAKADanIVTQVGNgdsfnalwskgniv 1241
..................................................
++ +++ + + +++ + +++ +++ + + ++++ + +++ +++ + +
gi|3752720 1242 tkvgdgmqvtaakgkanitttvgnglsvtathgdlnvntkvgdgvsvnav 1291
..................................................
++ + +++ +++ + +++++ + + +++ + + + +++ + ++
gi|3752720 1292 wgeynvntkvgnglnvaimkgkgnanihigdglginasyarnnvaikvgn 1341
..................................................
++ + + ++++++++ ++ ++ +++ + +++++ + ++++ +++
gi|3752720 1342 gdfyslsiaesntqsshlsslfenikqtvfnvegsqtinylirgdeants 1391
..................................................
+ +++++ + ++ + ++ + ++ ++ +++ ++ ++ ++ ++++ +
gi|3752720 1392 gvnkgrgainltevsaidgfqmdkidevssdlannlsgaitpvetpdinv 1441
.............................kfEeevqsql..eesslvrlk
+++ + +++ ++ +++ +++ + ++ k ++ q+ l++ e++++
gi|3752720 1442 iqndlqigdnvgsaqdqasphadavvrhaKQNKAAQNALsdKEKAEINHQ 1491
KlaDekqklldqikklkqqleelkq<-*
l ek+k l++i+k + qle +q
gi|3752720 1492 RLQQEKDKQLKTISKSQGQLESTNQ 1516
RtxA: domain 43 of 49, from 1215 to 1233: score 11.7, E = 0.027
*->GaGgaNvitkvGdggdlaf<-*
+++ aN++t+vG+g + ++
gi|3752720 1215 AKADANIVTQVGNGDSFNA 1233
Glyco_hydro_16: domain 2 of 2, from 1227 to 1254: score 8.1, E = 0.058
CS SBTTBTTEE-GGGEEEE...TT...SEEEEEEEE
*->fgedfdvtwgggnvsvsedpndadGggLtLtldk<-*
+g+ f+++w++gn++ + +g++ t++k
gi|3752720 1227 NGDSFNALWSKGNIVTK---VG---DGMQVTAAK 1254
Adeno_shaft: domain 1 of 2, from 1237 to 1270: score 4.4, E = 4.7
CS S--EEE-B-TTEEE-TS- EEE-B-TTEEEE
*->nnsLtlntgpGLtvtnna....LalklGagLtvd<-*
+++ ++g+G++vt +++ ++++ +G+gL+v+
gi|3752720 1237 KGNIVTKVGDGMQVTAAKgkanITTTVGNGLSVT 1270
RtxA: domain 44 of 49, from 1237 to 1252: score 7.0, E = 0.7
*->gaNvitkvGdggdlaf<-*
++N++tkvGdg +++
gi|3752720 1237 KGNIVTKVGDGMQVTA 1252
Big_2: domain 1 of 1, from 1253 to 1273: score 8.5, E = 0.086
CS SSS-EEEEEEETT.TEEEEEEE
*->akGtatItatsgdgnksasvtv<-*
akG+a+It t+g+ + s+++t
gi|3752720 1253 AKGKANITTTVGN-GLSVTATH 1273
RtxA: domain 45 of 49, from 1253 to 1271: score 14.4, E = 0.0043
*->GaGgaNvitkvGdggdlaf<-*
++G+aN+ t vG+g ++++
gi|3752720 1253 AKGKANITTTVGNGLSVTA 1271
Attacin_N: domain 1 of 1, from 1266 to 1273: score 2.1, E = 9.5
*->GlSLtkth<-*
GlS+t th
gi|3752720 1266 GLSVTATH 1273
RtxA: domain 46 of 49, from 1274 to 1290: score 4.9, E = 3
*->GgaNvitkvGdggdlaf<-*
G Nv tkvGdg ++++
gi|3752720 1274 GDLNVNTKVGDGVSVNA 1290
HIM: domain 2 of 2, from 1278 to 1291: score 3.7, E = 5.2
CS ..-EETT-TT--CC
*->itvtktDAvnvsQL<-*
++++++D+v+v++
gi|3752720 1278 VNTKVGDGVSVNAV 1291
BSP: domain 1 of 1, from 1285 to 1295: score 1.2, E = 2.3
*->GkdksVdqLWqdY<-*
G + V+ +W +Y
gi|3752720 1285 GVS--VNAVWGEY 1295
RtxA: domain 47 of 49, from 1291 to 1309: score 15.9, E = 0.0016
*->GaGgaNvitkvGdggdlaf<-*
+G++Nv tkvG+g ++a
gi|3752720 1291 VWGEYNVNTKVGNGLNVAI 1309
Adeno_shaft: domain 2 of 2, from 1296 to 1308: score 1.3, E = 35
CS -EEE-B-TTEEEE
*->aLalklGagLtvd<-*
++++k+G+gL+v
gi|3752720 1296 NVNTKVGNGLNVA 1308
RtxA: domain 48 of 49, from 1310 to 1328: score 8.0, E = 0.35
*->GaGgaNvitkvGdggdlaf<-*
++G++N ++Gdg +++
gi|3752720 1310 MKGKGNANIHIGDGLGINA 1328
Legionella_OMP: domain 1 of 1, from 1321 to 1345: score -0.3, E = 9.5
*->GnGFGv...YAKsAvAiLvGtsdFv<-*
G G G++ +YA+ vAi vG dF+
gi|3752720 1321 GDGLGInasYARNNVAIKVGNGDFY 1345
DUF904: domain 1 of 1, from 1347 to 1369: score 3.1, E = 2.4
*->vqIkEheaWqerLraLLgKidev<-*
+ I E + + ++L++L + i+++
gi|3752720 1347 LSIAESNTQSSHLSSLFENIKQT 1369
APG12: domain 1 of 1, from 1366 to 1384: score 3.9, E = 0.84
CS -S--EEEEETTSBTHHHHH
*->LKkkkfkVnpsqtfakvil<-*
+K+++f V++sqt+ +i+
gi|3752720 1366 IKQTVFNVEGSQTINYLIR 1384
WHEP-TRS: domain 1 of 1, from 1466 to 1478: score 1.7, E = 6.7
CS HHHHHHHTT--HH
*->lVRkLKseKApKe<-*
+VR +K++KA+++
gi|3752720 1466 VVRHAKQNKAAQN 1478
SOR_SNZ: domain 1 of 1, from 1467 to 1518: score -0.1, E = 5.5
*->vrHmrlvneeirklqslsedelytvakelaapyeLvkevakkgkLpv
vrH ++ +++ +l++++++e+ + + + + +L + +g+L++
gi|3752720 1467 VRHAKQNKAAQNALSDKEKAEINHQRLQQEKDKQLKTISKSQGQLES 1513
vnfaa<-*
+n aa
gi|3752720 1514 TNQAA 1518
K-box: domain 1 of 1, from 1477 to 1506: score 2.7, E = 3.3
*->yqkssgnsslwesntqnwqqEaaKLkaqien<-*
+++s++ +e n+q++qqE +K + i +
gi|3752720 1477 QNALSDKE-KAEINHQRLQQEKDKQLKTISK 1506
MSP1_C: domain 1 of 1, from 1573 to 1594: score -0.8, E = 5.2
*->YlenLkkkinnckv..EKkEae<-*
Yl+n ++k+n+ k++ Kk a+
gi|3752720 1573 YLDNIQNKLNDAKLtaQKKLAD 1594
Arrestin_N: domain 1 of 1, from 1599 to 1616: score 0.8, E = 9.4
CS B--CCCEEEEEEEEEEB-
*->fdhkrkkvftVirkldln<-*
f++kr++v+t i+k +
gi|3752720 1599 FIDKRETVITAIKKSEVG 1616
Nop25: domain 1 of 1, from 1634 to 1650: score 0.5, E = 8.9
*->aeRkvnrrKerskkrkk<-*
ae+k+ +rKe++ +k+
gi|3752720 1634 AEKKAEQRKEEALLQKQ 1650
Methyltransf_5: domain 1 of 1, from 1818 to 1833: score 3.9, E = 0.38
*->eNpRSRSAKLRvaEKi<-*
+NpRS+S++L E i
gi|3752720 1818 NNPRSHSSVLKKLELI 1833
Flagellar_rod: domain 1 of 1, from 1836 to 1857: score 0.8, E = 6.2
*->tkeisavidakhrqkeaceeDL<-*
k+++++id +r++ + +DL
gi|3752720 1836 KKDNKRFIDSTKRRLGSINTDL 1857
SVS_QK: domain 1 of 1, from 1938 to 1949: score 4.4, E = 7.4
*->sQlksFgQvKSq<-*
Q+ +FgQ+ S+
gi|3752720 1938 EQVTQFGQQVSF 1949
DUF465: domain 1 of 1, from 1959 to 1973: score 3.4, E = 4.9
CS .......HHHHHHHH
*->KkdvqeeEIekLkrq<-*
K d++++EI++L +
gi|3752720 1959 KGDIAQSEINRLTDL 1973
DUF752: domain 1 of 1, from 2048 to 2060: score 1.5, E = 5.9
*->pelaelaeaLlkq<-*
pel+ la++Ll++
gi|3752720 2048 PELHTLAQQLLTD 2060
DUF336: domain 1 of 1, from 2077 to 2096: score 2.1, E = 5.6
*->pvltledAnklgaaAvakAe<-*
++++ e A++l++ A +A+
gi|3752720 2077 RHFDSELAYELVKTASPEAK 2096
DUF1997: domain 1 of 1, from 2106 to 2116: score 1.4, E = 5.3
*->LleDFhawiae<-*
L+eDF +wi+
gi|3752720 2106 LVEDFERWIGD 2116
FLILHELTA: domain 1 of 1, from 2119 to 2141: score 4.2, E = 1.5
*->PswlgdynsaldkGverfdralek<-*
P+ + +n+a+dk ++ f +a++k
gi|3752720 2119 PEG-EKRNGAIDKKMKSFAEAIDK 2141
DUF1322: domain 1 of 1, from 2122 to 2144: score 1.8, E = 6.5
*->MsKRnRDiDKAiAsLaEiakkYFk<-*
KRn iDK + s aE k F+
gi|3752720 2122 -EKRNGAIDKKMKSFAEAIDKDFR 2144
DUF1773: domain 1 of 1, from 2173 to 2184: score 2.3, E = 4.1
*->RdngYpaipVPFL<-*
d g+++i+VPFL
gi|3752720 2173 -DDGFSVIKVPFL 2184
3Beta_HSD: domain 1 of 1, from 2293 to 2299: score -0.6, E = 9.2
*->lVTGGgG<-*
+VTG++G
gi|3752720 2293 VVTGASG 2299
Corona_NS3b: domain 1 of 1, from 2320 to 2375: score 1.2, E = 1.5
*->miGGLFLntLsFvivsnHsivnntAnvHHiqqervivqqhhvvsart
G +LntLsF + vn v q ++ + ++ + t
gi|3752720 2320 -TGQSYLNTLSFLVFDGGHSVNESLVVYQALQATDEIKRKQILNSYT 2365
qnyypefsia<-*
ny ia
gi|3752720 2366 ANYQDLADIA 2375
Flavodoxin_2: domain 1 of 1, from 2341 to 2373: score 2.7, E = 1.8
CS EEEEETT.CCCSHHHHHHHHHHHHHHHHCCGGH
*->ppfvaygTvhvisdearkemleayrarlkellg<-*
+++v+y ++ +rk++l+ y+a +++l++
gi|3752720 2341 ESLVVYQALQATDEIKRKQILNSYTANYQDLAD 2373
CysG_dimeriser: domain 1 of 1, from 2366 to 2377: score 2.7, E = 6
*->qslGrLAalAgr<-*
+++ +LA++Ag+
gi|3752720 2366 ANYQDLADIAGE 2377
SPOR: domain 1 of 1, from 2472 to 2506: score 5.1, E = 0.73
CS HHHHHHHHHTTT--...EEEEEETTEEEEEESS--
*->AealaakLrakGfaayvavvsgggtlYRVrvGpfa<-*
A ++aa+L++k++++ v+ +++ YRV++G+ a
gi|3752720 2472 AARAAANLAGKHPDSSVVIQLDANGKYRVVYGDLA 2506
FTP: domain 1 of 1, from 2485 to 2506: score 3.8, E = 3.4
*->GgeliVhvskdGkvksvsGdfs<-*
++++++ ++ +Gk + v+Gd+
gi|3752720 2485 DSSVVIQLDANGKYRVVYGDLA 2506
DUF2292: domain 1 of 1, from 2487 to 2500: score 2.4, E = 7
*->GkViQIEknEKiRL<-*
++ViQ+++n K R
gi|3752720 2487 SVVIQLDANGKYRV 2500
Ribosomal_L28e: domain 1 of 1, from 2509 to 2517: score 0.8, E = 9.4
*->StdLiWqvV<-*
S+ L WqvV
gi|3752720 2509 SNKLRWQVV 2517
DUF1094: domain 1 of 1, from 2533 to 2549: score 1.6, E = 8.1
*->GreaeeIaanLteAFde<-*
G +a+e a++L++ +++
gi|3752720 2533 GYSADELATKLKQFYQA 2549
DUF2331: domain 1 of 1, from 2535 to 2549: score 2.6, E = 0.83
*->aqpDLAtrLvqFven<-*
+++ LAt+L qF+
gi|3752720 2535 SADELATKLKQFYQA 2549
Cna_B: domain 1 of 1, from 2661 to 2682: score 1.1, E = 8.4
CS EEEEEEEESSS-............EEEEEE
*->GYtltttpveftitensdgeeekivtvtit<-*
GYt++++ + +i++n++ + i+
gi|3752720 2661 GYTQADSVTKGEIADNTE--------IFIK 2682
53-BP1_Tudor: domain 1 of 1, from 2701 to 2714: score 0.5, E = 5.6
CS EEEEEEEE-SSSEE
*->YsGkitkDaGeGky<-*
YsG i D+GeG +
gi|3752720 2701 YSGNIQVDVGEGEF 2714
Hep_Hag: domain 2 of 2, from 2730 to 2743: score 3.4, E = 9.2
CS ECSTT-EEESTT-E
*->AtganStAiGsnak<-*
+ g++S+A+G+n++
gi|3752720 2730 TGGFKSLAFGDNNV 2743
RtxA: domain 49 of 49, from 2737 to 2754: score 7.1, E = 0.64
*->GaGgaNvitkvGdggdlaf<-*
+ G Nv++++G +gd+ +
gi|3752720 2737 AFGDNNVMVHIG-HGDSKH 2754
Saf-Nte_pilin: domain 1 of 1, from 2756 to 2763: score 0.9, E = 8.2
*->ldvvaYQa<-*
+d+ +YQa
gi|3752720 2756 VDIGGYQA 2763
Enhancin: domain 1 of 1, from 2790 to 2802: score -0.4, E = 8.6
*->msktleipvlplP<-*
m k++++p+l +P
gi|3752720 2790 MDKSIPTPPLVNP 2802
DUF1022: domain 1 of 1, from 2800 to 2818: score 4.7, E = 0.27
*->yePLdeTLWmIervAaeirrrLal<-*
++P+d+T +r+A e+++ +a+
gi|3752720 2800 VNPFDDT----ARIA-EVLKGIAR 2818
DUF2277: domain 1 of 1, from 2836 to 2852: score 0.8, E = 9.9
*->AAAlQfVRKvSGltkps<-*
A A+ fVR +SGl + s
gi|3752720 2836 AGARKFVRDMSGLDQTS 2852
CHAD: domain 1 of 1, from 2838 to 2881: score 0.6, E = 9.2
*->aralLrrladaargageeaafalgllaareaarrrlaraalall<-*
ar ++r+ + ++++ + +++ +l l ++e++ r l+ +a+ +l
gi|3752720 2838 ARKFVRDMSGLDQTSSVDYKTLLDLDSQHERSSRGLQNDAESAL 2881
TTKRSYEDQ: domain 1 of 1, from 2876 to 2892: score -1.8, E = 8.9
*->dtispLnqKFsqYLHEn<-*
d+ s+Ln+KF q+L En
gi|3752720 2876 DAESALNKKFNQWLGEN 2892
WXG100: domain 1 of 1, from 2904 to 2913: score 2.0, E = 8.2
*->AekFeqaDqq<-*
A+kF+qa+q+
gi|3752720 2904 ADKFRQANQK 2913
GSH-S_ATP: domain 1 of 1, from 2947 to 2967: score 0.6, E = 9
CS -TTHHHHHHHHTTTTTS-EEE
*->dpNlnvilEtlTqygtrpvma<-*
d Nl++++ ++Tq++ + ma
gi|3752720 2947 DTNLGSLFGLMTQQYSATGMA 2967
GET2: domain 1 of 1, from 2953 to 2959: score -0.8, E = 9.2
*->lfGLlsy<-*
lfGL+++
gi|3752720 2953 LFGLMTQ 2959
PhageMin_Tail: domain 2 of 2, from 2984 to 3004: score 4.6, E = 0.87
*->qkklkgltkddaqkaaalktlFG<-*
+k l++l+ ++++ ++l+++FG
gi|3752720 2984 NKLLGRLS--EVGADTTLADIFG 3004
UPF0020: domain 1 of 1, from 3016 to 3039: score 0.2, E = 9.3
*->RlgskgalekLYeefldelkrvlrg<-*
R+g+++++e++ +e+l+++k+ + g
gi|3752720 3016 RTGKPVDGEAMLKEMLEVIKE-FSG 3039
DNA_mis_repair: domain 1 of 1, from 3023 to 3046: score 1.5, E = 7.4
CS HHHHHCCE..EEEEEEET...TCCCCCCC
*->GdavaknllPlpiekedgraidfkisgfl<-*
G a +k++ l++ ke++ ++++ +f+
gi|3752720 3023 GEAMLKEM--LEVIKEFS---GDQLAAFT 3046
CRM1_C: domain 1 of 1, from 3034 to 3039: score -0.4, E = 9.7
CS HHTTT-
*->iKEfgG<-*
iKEf+G
gi|3752720 3034 IKEFSG 3039
SRX: domain 1 of 1, from 3040 to 3052: score 1.1, E = 5.4
CS ---EEEEE-TT-BEE
*->MiDQlAvFTPQGqlL<-*
DQlA FT G lL
gi|3752720 3040 --DQLAAFTNPGKLL 3052
H2TH: domain 1 of 1, from 3055 to 3070: score 1.6, E = 3.8
CS HHHHHTTHCHCSSTTS
*->LqeAiemggggirtfs<-*
L+++i++g++g+rtf
gi|3752720 3055 LEAGIKAGEDGVRTFA 3070
Trp_dioxygenase: domain 1 of 1, from 3095 to 3108: score -0.4, E = 7.2
*->dsaqqghndfsksFG<-*
dsaq ++n+++++FG
gi|3752720 3095 DSAQ-ANNKAERAFG 3108
XLF: domain 1 of 1, from 3138 to 3162: score 1.6, E = 5.3
*->qqvieeLidlLneKDaDDDFdDFQFFGiKreidkLqdkled<-*
++ + dlLn+K++ d+L ++++
gi|3752720 3138 KE--NLTADLLNMKQK--------------TFDFLRNSGHL 3162
DUF91: domain 1 of 1, from 3147 to 3156: score 1.1, E = 5.9
*->nvksktldlF<-*
n+k+kt d++
gi|3752720 3147 NMKQKTFDFL 3156
HemolysinCabind: domain 4 of 9, from 3193 to 3205: score 1.6, E = 25
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
n+ Gg G+D++
gi|3752720 3193 NNNFWGGRGDDVY 3205
HemolysinCabind: domain 5 of 9, from 3215 to 3221: score 1.8, E = 22
CS E--SSS-
*->yGGaGnD<-*
+GG+GnD
gi|3752720 3215 TGGEGND 3221
HemolysinCabind: domain 6 of 9, from 3233 to 3240: score 2.1, E = 18
CS E--SSS-E
*->yGGaGnDt<-*
+GG+G+Dt
gi|3752720 3233 FGGDGDDT 3240
Herpes_UL46: domain 1 of 1, from 3269 to 3285: score -0.9, E = 9.9
*->dApPpsavvntfgeyls<-*
dA++++ +v t+g+y
gi|3752720 3269 DAGNGQDYVVTSGNYNR 3285
AntA: domain 1 of 1, from 3272 to 3298: score 2.6, E = 2.5
*->ENqDFisvlkktenPNlekgqGGrRpskDYhLTL<-*
++qD+++++ ++++ G +DY++T+
gi|3752720 3272 NGQDYVVTSGNYNR-----VDTG--AGQDYAVTI 3298
HemolysinCabind: domain 7 of 9, from 3319 to 3331: score 8.1, E = 0.28
CS S-EEEEESSCGEE
*->nDtLyGgaGnDtl<-*
+++++G +GnDt+
gi|3752720 3319 DNRIDGYSGNDTI 3331
HemolysinCabind: domain 8 of 9, from 3340 to 3349: score 4.6, E = 3.2
CS EEEESSCGEE
*->LyGgaGnDtl<-*
++Gg+G+D l
gi|3752720 3340 INGGEGDDHL 3349
Peptidase_C36: domain 1 of 1, from 3342 to 3352: score 0.3, E = 6.9
*->GKEsDGHFvAA<-*
G E D H +AA
gi|3752720 3342 GGEGDDHLIAA 3352
HemolysinCabind: domain 9 of 9, from 3361 to 3369: score 1.3, E = 33
CS EEESSCGEE
*->yGgaGnDtl<-*
+Gg+G D+l
gi|3752720 3361 NGGDGQDLL 3369
RVP_2: domain 1 of 1, from 3392 to 3405: score 0.3, E = 9.9
*->nfsraRVNHVaAEe<-*
+++ RVN + AE+
gi|3752720 3392 EVIDNRVNDINAED 3405
Copper-fist: domain 1 of 1, from 3406 to 3414: score 1.7, E = 7.4
CS -EEETTEEE
*->MvvINGvKy<-*
M+++NGv +
gi|3752720 3406 MILFNGVDW 3414
Peptidase_S15: domain 1 of 1, from 3438 to 3455: score -1.1, E = 9.8
CS S.S. . .. ..HHHHHH
*->kAee.f.hi.sYtLNDYf<-*
+A+e f+ ++s t+NDYf
gi|3752720 3438 TAQEiFeSVgSVTFNDYF 3455
DUF2151: domain 1 of 1, from 3457 to 3472: score -1.9, E = 6.6
*->GnvAkLYpqLaeKded<-*
G +AkL q+++Kd+
gi|3752720 3457 GHRAKLVTQMGDKDKS 3472
//