hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            67922689.fa
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Query sequence: gi|67922689|ref|ZP_00516193.1|
Accession:      [none]
Description:    hypothetical protein CwatDRAFT_3641 [Crocosphaera watsonii WH 8501]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Urm1            Urm1 (Ubiquitin related modifier)         3.4      0.067   1
DUF1108         Protein of unknown function (DUF1108)     1.7       0.53   1
DUF1400         Alpha/beta hydrolase of unknown funct     2.0        4.1   1
DUF976          Caenorhabditis elegans protein of unk     1.4        5.1   1
DUF1888         Domain of unknown function (DUF1888)      1.5        6.3   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
DUF976            1/1      50    82 ..    72   104 ..     1.4      5.1
DUF1400           1/1     125   146 ..    80   101 ..     2.0      4.1
DUF1108           1/1     160   175 ..     1    18 [.     1.7     0.53
Urm1              1/1     189   198 ..   101   110 ..     3.4    0.067
DUF1888           1/1     317   358 ..     1    42 [.     1.5      6.3

Alignments of top-scoring domains:
DUF976: domain 1 of 1, from 50 to 82: score 1.4, E = 5.1
                   *->YekvDeivqkiateeiryaIHLsSHSqKNviqI<-*
                      Y  +D i + + + e   aIHL SH     +qI
  gi|6792268    50    YDEIDNISAFLSQQENLEAIHLYSHGNTDLLQI    82

DUF1400: domain 1 of 1, from 125 to 146: score 2.0, E = 4.1
                   *->GkeiLaqlsqiiqtpsdqngkl<-*
                      G+e+L+q+s+i+ ++  ++++l
  gi|6792268   125    GQEFLQQISDITGADVQVSDDL    146

DUF1108: domain 1 of 1, from 160 to 175: score 1.7, E = 0.53
                   *->MYYkIGeicqKiInvnGF<-*
                        Y+IGei    I vn F
  gi|6792268   160    --YEIGEIETEAIAVNDF    175

Urm1: domain 1 of 1, from 189 to 198: score 3.4, E = 0.067
                CS    TEEEEEEE--
                   *->gDkvvFiSTL<-*
                      gD+v+F+STL
  gi|6792268   189    GDTVTFTSTL    198

DUF1888: domain 1 of 1, from 317 to 358: score 1.5, E = 6.3
                   *->Msntq.gtaqfikVTVtLeAnGePVFsYtdAdGeecsGDVvvT<-*
                       s+ q+g   f  V+Vt + n+   Fs  d + +  +G +++T
  gi|6792268   317    ISVGQsGNLSFTGVNVTVD-NNAELFSHVDTNSQYNPGNITIT    358

//