hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 78189201.fa
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Query sequence: gi|78189201|ref|YP_379539.1|
Accession: [none]
Description: hypothetical protein Cag_1235 [Chlorobium chlorochromatii CaD3]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Fimbrial_CS1 CS1 type fimbrial major subunit 45.7 9.3e-16 12
DUF1021 Protein of unknown function (DUF1021) 23.2 1.1e-05 9
Big_4 Bacterial Ig-like domain (group 4) 16.0 0.0017 7
Dockerin_1 Dockerin type I repeat 13.2 0.0064 1
Big_2 Bacterial Ig-like domain (group 2) 12.1 0.008 6
He_PIG Putative Ig domain 10.5 0.034 2
DUF1586 Protein of unknown function (DUF1586) 8.8 0.15 4
Flocculin Flocculin repeat 9.3 0.19 6
CW_binding_2 Putative cell wall binding repeat 2 6.1 0.36 1
NPCBM_assoc NPCBM-associated, NEW3 domain of alph 6.6 0.39 9
Maf_N Maf N-terminal region 6.5 0.39 2
CBM_6 Carbohydrate binding module (family 6 4.7 0.43 1
Polyoma_coat2 Polyomavirus coat protein 3.9 0.57 1
DUF2501 Protein of unknown function (DUF2501) 1.7 0.83 1
DUF88 Protein of unknown function DUF88 4.5 1.1 1
DUF1174 Repeat of unknown function (DUF1174) 6.3 1.2 2
DUF2210 Uncharacterized conserved protein (DU 2.5 1.5 1
Clp_N Clp amino terminal domain 4.9 1.5 1
DUF297 TM1410 hypothetical-related protein 2.4 1.8 1
DUF775 Protein of unknown function (DUF775) 1.0 2.2 1
DUF1921 Domain of unknown function (DUF1921) 2.1 2.4 1
TBP Transcription factor TFIID (or TATA-b 3.8 2.6 1
IWS1_C IWS1 C-terminus 2.2 2.6 1
DUF1122 Protein of unknown function (DUF1122) 1.5 2.6 1
Phi_1 Phosphate-induced protein 1 conserved 1.1 2.7 1
Glyco_hydro_26 Glycosyl hydrolase family 26 1.5 2.9 1
DUF2074 Predicted permease (DUF2074) 0.7 3.1 1
Wzz Chain length determinant protein 2.5 3.1 1
PilS PilS N terminal 2.1 3.2 1
Methyltrans_Typ Typoviral methyltransferase 2.5 3.2 1
Glyco_hydro_43 Glycosyl hydrolases family 43 -0.0 3.3 1
Cna_B Cna protein B-type domain 2.3 3.7 1
SoxZ Sulphur oxidation protein SoxZ 2.3 3.8 1
GAD GAD domain 2.4 3.9 1
Ribosomal_L31e Ribosomal protein L31e 2.0 4.2 1
CARDB CARDB 2.8 4.4 2
Germane Sporulation and spore germination 2.7 4.6 1
FeoA FeoA domain 3.2 4.6 1
IolB Myo-inositol catabolism protein IolB 1.4 5.3 1
Fels1 Fels-1 Prophage Protein-like 2.5 5.7 2
Amino_oxidase Flavin containing amine oxidoreductas 0.1 5.9 1
Gemini_AC4_5 Geminivirus AC4/5 conserved region 3.1 6.3 1
Bse634I Cfr10I/Bse634I restriction endonuclea 0.3 6.5 1
Noggin Noggin -3.4 7.3 1
Porin_2 Porin subfamily 0.0 7.4 1
DUF1359 Protein of unknown function (DUF1359) 1.4 7.7 1
DUF336 Domain of unknown function (DUF336) 1.6 7.7 1
DUF1554 Protein of unknown function (DUF1554) 0.7 8.5 2
Death Death domain 1.7 8.8 1
CVNH CVNH domain 1.3 8.9 1
Cutinase Cutinase 0.6 9 1
MucBP MucBP domain 1.9 9.1 3
IFP_35_N Interferon-induced 35 kDa protein (IF 0.7 9.4 1
DUF2308 Predicted domain in sensory proteins -0.3 9.9 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Phi_1 1/1 110 121 .. 313 324 .] 1.1 2.7
Methyltrans_Typ 1/1 148 172 .. 206 230 .. 2.5 3.2
DUF2210 1/1 170 179 .. 246 255 .] 2.5 1.5
DUF2074 1/1 240 256 .. 1 17 [. 0.7 3.1
Cutinase 1/1 305 323 .. 205 225 .] 0.6 9
He_PIG 1/2 308 326 .. 42 61 .] 1.4 13
He_PIG 2/2 350 387 .. 26 61 .] 9.1 0.083
DUF775 1/1 361 377 .. 49 65 .. 1.0 2.2
DUF1554 1/2 443 466 .. 147 172 .] 0.5 9.6
CARDB 1/2 455 509 .. 6 62 .. 1.9 7.8
DUF1021 1/9 463 474 .. 13 24 .. 4.3 2.1
Fimbrial_CS1 1/12 466 474 .. 1 9 [. 4.7 0.17
NPCBM_assoc 1/9 470 479 .. 77 86 .] 1.4 12
MucBP 1/3 534 569 .. 70 100 .. 1.1 15
Glyco_hydro_43 1/1 535 542 .. 327 334 .] -0.0 3.3
Fels1 1/2 550 561 .. 45 56 .] 1.3 13
DUF1021 2/9 555 566 .. 13 24 .. 3.1 4.6
Fimbrial_CS1 2/12 558 566 .. 1 9 [. 4.7 0.17
NPCBM_assoc 2/9 562 571 .. 77 86 .] 0.5 22
Big_2 1/6 563 579 .. 74 90 .] 1.9 7
Big_4 1/7 563 578 .. 20 37 .. 3.4 4.8
MucBP 2/3 626 661 .. 70 100 .. 0.2 25
Fels1 2/2 642 653 .. 45 56 .] 1.3 13
DUF1021 3/9 647 658 .. 13 24 .. 3.1 4.6
Fimbrial_CS1 3/12 650 658 .. 1 9 [. 4.7 0.17
NPCBM_assoc 3/9 654 663 .. 77 86 .] 1.4 12
TBP 1/1 686 704 .. 60 78 .. 3.8 2.6
Glyco_hydro_26 1/1 715 743 .. 325 359 .] 1.5 2.9
NPCBM_assoc 4/9 748 757 .. 77 86 .] 1.0 15
Ribosomal_L31e 1/1 748 772 .. 71 97 .] 2.0 4.2
SoxZ 1/1 749 770 .. 83 104 .] 2.3 3.8
DUF1586 1/4 768 782 .. 1 15 [. 1.4 21
DUF336 1/1 781 793 .. 114 126 .. 1.6 7.7
DUF2308 1/1 820 829 .. 196 205 .] -0.3 9.9
CARDB 2/2 825 845 .. 6 27 .. 0.9 14
DUF1021 4/9 833 844 .. 13 24 .. 3.1 4.6
Fimbrial_CS1 4/12 836 844 .. 1 9 [. 4.7 0.17
NPCBM_assoc 5/9 840 849 .. 77 86 .] 0.5 22
Big_2 2/6 841 857 .. 74 90 .] 3.1 3.2
Big_4 2/7 841 880 .. 20 58 .. 1.9 13
Flocculin 1/6 843 863 .. 26 46 .] 4.1 4.4
Wzz 1/1 904 956 .. 159 242 .] 2.5 3.1
Fimbrial_CS1 5/12 928 936 .. 1 9 [. 4.7 0.17
NPCBM_assoc 6/9 932 941 .. 77 86 .] 0.5 22
Porin_2 1/1 932 966 .. 464 505 .] 0.0 7.4
Big_2 3/6 933 949 .. 74 90 .] 1.9 7
Big_4 3/7 933 972 .. 20 58 .. 1.0 23
DUF1554 2/2 997 1020 .. 147 172 .] 0.2 12
Fimbrial_CS1 6/12 1020 1028 .. 1 9 [. 4.4 0.23
MucBP 3/3 1020 1045 .. 1 28 [. 0.6 20
DUF1174 1/2 1021 1047 .. 1 26 [] 2.7 10
Big_4 4/7 1025 1040 .. 20 37 .. 2.8 7.2
Amino_oxidase 1/1 1030 1052 .. 458 482 .] 0.1 5.9
Flocculin 2/6 1031 1047 .. 30 46 .] 2.6 12
DUF1586 2/4 1044 1057 .. 1 14 [. 4.9 2.1
DUF1021 5/9 1109 1120 .. 13 24 .. 3.1 4.6
Fimbrial_CS1 7/12 1112 1120 .. 1 9 [. 4.7 0.17
NPCBM_assoc 7/9 1116 1125 .. 77 86 .] 0.5 22
Big_2 4/6 1117 1133 .. 74 90 .] 1.9 7
Big_4 5/7 1117 1161 .. 20 62 .] 0.5 30
Flocculin 3/6 1119 1139 .. 26 46 .] 0.2 48
Maf_N 1/2 1167 1190 .. 1 24 [. 3.9 2.4
PilS 1/1 1190 1207 .. 82 101 .. 2.1 3.2
Fimbrial_CS1 8/12 1204 1212 .. 1 9 [. 4.4 0.23
DUF1174 2/2 1205 1231 .. 1 26 [] 3.5 6.5
Big_4 6/7 1209 1224 .. 20 37 .. 2.8 7.1
Flocculin 4/6 1215 1231 .. 30 46 .] 1.5 22
Noggin 1/1 1288 1300 .. 111 123 .. -3.4 7.3
FeoA 1/1 1289 1303 .. 1 15 [. 3.2 4.6
DUF1021 6/9 1293 1304 .. 13 24 .. 0.0 34
Fimbrial_CS1 9/12 1296 1305 .. 1 10 [. 0.8 4
Flocculin 5/6 1308 1323 .. 31 46 .] 0.7 37
DUF1586 3/4 1321 1333 .. 1 14 [. 1.3 22
DUF1359 1/1 1382 1400 .. 1 21 [. 1.4 7.7
DUF1021 7/9 1385 1396 .. 13 24 .. 0.5 24
Fimbrial_CS1 10/12 1388 1396 .. 1 9 [. 2.5 1
NPCBM_assoc 8/9 1392 1401 .. 77 86 .] 0.5 22
Big_2 5/6 1393 1409 .. 74 90 .] 1.2 11
Big_4 7/7 1393 1408 .. 20 37 .. 3.5 4.6
DUF1021 8/9 1477 1488 .. 13 24 .. 3.1 4.6
Fimbrial_CS1 11/12 1480 1488 .. 1 9 [. 4.7 0.17
NPCBM_assoc 9/9 1484 1493 .. 77 86 .] 0.5 22
Big_2 6/6 1485 1501 .. 74 90 .] 1.9 7
Flocculin 6/6 1487 1507 .. 26 46 .] 0.2 48
DUF1586 4/4 1505 1517 .. 1 14 [. 1.3 22
DUF1021 9/9 1569 1580 .. 13 24 .. 2.8 5.6
Fimbrial_CS1 12/12 1572 1581 .. 1 10 [. 0.8 4
DUF88 1/1 1573 1603 .. 138 162 .] 4.5 1.1
CW_binding_2 1/1 1589 1623 .. 67 102 .] 6.1 0.36
Cna_B 1/1 1609 1631 .. 49 77 .] 2.3 3.7
Germane 1/1 1617 1677 .. 61 124 .] 2.7 4.6
DUF1921 1/1 1632 1647 .. 36 51 .] 2.1 2.4
GAD 1/1 1632 1644 .. 1 12 [. 2.4 3.9
CBM_6 1/1 1637 1661 .. 59 84 .. 4.7 0.43
Bse634I 1/1 1661 1679 .. 1 21 [. 0.3 6.5
IWS1_C 1/1 1664 1673 .. 276 285 .] 2.2 2.6
DUF2501 1/1 1681 1689 .. 164 172 .] 1.7 0.83
DUF297 1/1 1735 1755 .. 1 25 [. 2.4 1.8
IFP_35_N 1/1 1784 1794 .. 78 88 .] 0.7 9.4
Gemini_AC4_5 1/1 1806 1813 .. 26 33 .] 3.1 6.3
CVNH 1/1 1815 1822 .. 105 112 .] 1.3 8.9
DUF1122 1/1 1839 1853 .. 1 16 [. 1.5 2.6
Death 1/1 1885 1910 .. 62 87 .] 1.7 8.8
Clp_N 1/1 1889 1924 .. 17 53 .] 4.9 1.5
Maf_N 2/2 1889 1922 .. 1 37 [] 2.6 6
Dockerin_1 1/1 1943 1963 .. 1 21 [] 13.2 0.0064
IolB 1/1 1969 1976 .. 250 257 .] 1.4 5.3
Polyoma_coat2 1/1 1991 2006 .. 138 153 .. 3.9 0.57
Alignments of top-scoring domains:
Phi_1: domain 1 of 1, from 110 to 121: score 1.1, E = 2.7
*->wDPktssCsTlv<-*
++ ++s+CsTlv
gi|7818920 110 FNTVVSACSTLV 121
Methyltrans_Typ: domain 1 of 1, from 148 to 172: score 2.5, E = 3.2
*->rggsYeQPlsalyWLktgkIqlpdg<-*
++++Y++ l+a ++L+++ + l +g
gi|7818920 148 KAAAYQHTLDASSLLRVNAVALDNG 172
DUF2210: domain 1 of 1, from 170 to 179: score 2.5, E = 1.5
*->arGLpMqIvy<-*
++GL+++I++
gi|7818920 170 DNGLKVEIWI 179
DUF2074: domain 1 of 1, from 240 to 256: score 0.7, E = 3.1
*->niklsvllqsimFtffg<-*
n + vllqsi+Ftf++
gi|7818920 240 NRTTEVLLQSISFTFAA 256
Cutinase: domain 1 of 1, from 305 to 323: score 0.6, E = 9
CS C-HHHHH.HHHHHHHHHHHHH
*->lsYgsdgmttqAaaFvasklg<-*
lsY + tt+A++F++++ +
gi|7818920 305 LSYTAG--TTAALDFAVQATD 323
He_PIG: domain 1 of 2, from 308 to 326: score 1.4, E = 13
*->tptvqpGsytftvtatdgsg<-*
t ++++ + +f v+atd+ g
gi|7818920 308 TAGTTA-ALDFAVQATDANG 326
He_PIG: domain 2 of 2, from 350 to 387: score 9.1, E = 0.083
*->sGLtLdsstGritGt..PtptvqpGsytftvtatdgsg<-*
s +tL ss+G++tG+ + t ++G+y f++ a d+ +
gi|7818920 350 STITLTSSNGHLTGSvvLPRTFSAGVYLFRLYADDKTT 387
DUF775: domain 1 of 1, from 361 to 377: score 1.0, E = 2.2
*->LLptvplPpgtaAaVYF<-*
L++ v+lP ++A+VY+
gi|7818920 361 LTGSVVLPRTFSAGVYL 377
DUF1554: domain 1 of 2, from 443 to 466: score 0.5, E = 9.6
*->nSqPWtsgagnnlGqfGsant.tssni<-*
+ W+ + ++++G++G++ + t ++
gi|7818920 443 Q---WNADGTAITGAIGNSLMlTEAHV 466
CARDB: domain 1 of 2, from 455 to 509: score 1.9, E = 7.8
*->vessslspsepyageentitvt.VkNqGtaasgsftvr...lYvdGt
+ +sl +e+++g+ +t+t+t N Gt s +t+++ + +++
gi|7818920 455 I-GNSLMLTEAHVGKKITVTATyTDNRGTLESVVSTATsavVNINDA 500
svlsgtvtVGdips<-*
+ g+v++ ++
gi|7818920 501 PT--GSVSI---SG 509
DUF1021: domain 1 of 9, from 463 to 474: score 4.3, E = 2.1
*->dahvGekvtlkA<-*
+ahvG+k+t++A
gi|7818920 463 EAHVGKKITVTA 474
Fimbrial_CS1: domain 1 of 12, from 466 to 474: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 466 VGKKITVTA 474
NPCBM_assoc: domain 1 of 9, from 470 to 479: score 1.4, E = 12
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 470 ITVTATYTDN 479
MucBP: domain 1 of 3, from 534 to 569: score 1.1, E = 15
*->Y...adktkvag.itVv.gq.vTptlkdtlpvnvtYt<-*
Y+ +ad t+++g i++ + T+ k++ +v++tYt
gi|7818920 534 YqwnADGTVITGaIGNSfTLtETHVGKKI-TVTATYT 569
Glyco_hydro_43: domain 1 of 1, from 535 to 542: score -0.0, E = 3.3
CS EEETTTEE
*->eWkaDGWP<-*
+W+aDG+
gi|7818920 535 QWNADGTV 542
Fels1: domain 1 of 2, from 550 to 561: score 1.3, E = 13
*->SraLTekYLGkk<-*
S++LTe Gkk
gi|7818920 550 SFTLTETHVGKK 561
DUF1021: domain 2 of 9, from 555 to 566: score 3.1, E = 4.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 555 ETHVGKKITVTA 566
Fimbrial_CS1: domain 2 of 12, from 558 to 566: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 558 VGKKITVTA 566
NPCBM_assoc: domain 2 of 9, from 562 to 571: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 562 ITVTATYTDG 571
Big_2: domain 1 of 6, from 563 to 579: score 1.9, E = 7
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+ + + v
gi|7818920 563 TVTATYTDGHGTTESVV 579
Big_4: domain 1 of 7, from 563 to 578: score 3.4, E = 4.8
*->tVtvyysdGtvsteelkV<-*
tVt++y+dG + +++V
gi|7818920 563 TVTATYTDG--HGTTESV 578
MucBP: domain 2 of 3, from 626 to 661: score 0.2, E = 25
*->Y...adktkvag.itVv.gq.vTptlkdtlpvnvtYt<-*
Y+ +ad t ++g i++ + T+ k++ +v++tYt
gi|7818920 626 YqwnADGTAITGaIGNSfTLtETHVGKKI-TVTATYT 661
Fels1: domain 2 of 2, from 642 to 653: score 1.3, E = 13
*->SraLTekYLGkk<-*
S++LTe Gkk
gi|7818920 642 SFTLTETHVGKK 653
DUF1021: domain 3 of 9, from 647 to 658: score 3.1, E = 4.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 647 ETHVGKKITVTA 658
Fimbrial_CS1: domain 3 of 12, from 650 to 658: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 650 VGKKITVTA 658
NPCBM_assoc: domain 3 of 9, from 654 to 663: score 1.4, E = 12
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 654 ITVTATYTDN 663
TBP: domain 1 of 1, from 686 to 704: score 3.8, E = 2.6
CS TSEEEEEEESSHHHHHHHH
*->SGKiviTGAkSeeeakrAa<-*
+G+i+iTGA++++ + +++
gi|7818920 686 TGSIYITGAATKGQILTVN 704
Glyco_hydro_26: domain 1 of 1, from 715 to 743: score 1.5, E = 2.9
CS TT.....---TTHHHHHHH HHHH..........ST
*->ngnfvmtlfdnqwsphens..glkalynsswVlnkDE<-*
ng +f +qw ++e+ +g+++ ss++l+ D
gi|7818920 715 NG-----EFTYQWQANEIDitGATS---SSYTLTNDD 743
NPCBM_assoc: domain 4 of 9, from 748 to 757: score 1.0, E = 15
*->ltasAsYtvs<-*
++++AsYt++
gi|7818920 748 IRVVASYTDN 757
Ribosomal_L31e: domain 1 of 1, from 748 to 772: score 2.0, E = 4.2
CS EEEEEEETTT.....TEEEEEE----X
*->vRVrisRkrNedEDAkeelyvlvtvAe<-*
+RV++s N ke ++ +tvA
gi|7818920 748 IRVVASYTDN--HGTKESVVSTATVAV 772
SoxZ: domain 1 of 1, from 749 to 770: score 2.3, E = 3.8
CS .EEEEEEETTS-EEEEEEEE--
*->elkfsWtDnkGssetaeakItv<-*
++ s+tDn G++e+ +++ tv
gi|7818920 749 RVVASYTDNHGTKESVVSTATV 770
DUF1586: domain 1 of 4, from 768 to 782: score 1.4, E = 21
*->sRtALAAvsqtPtgA<-*
+ A+A v+ PtgA
gi|7818920 768 ATVAVANVNDVPTGA 782
DUF336: domain 1 of 1, from 781 to 793: score 1.6, E = 7.7
*->GaiGVSGgPsgeq<-*
Ga+++SG P++ q
gi|7818920 781 GAVTISGTPTQNQ 793
DUF2308: domain 1 of 1, from 820 to 829: score -0.3, E = 9.9
*->sistAirrSL<-*
+i+ Ai +SL
gi|7818920 820 TITGAISNSL 829
CARDB: domain 2 of 2, from 825 to 845: score 0.9, E = 14
*->vessslspsepyageentitvt<-*
+ s+sl +e+++g+ +t+t+t
gi|7818920 825 I-SNSLVLGETHVGKKITVTAT 845
DUF1021: domain 4 of 9, from 833 to 844: score 3.1, E = 4.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 833 ETHVGKKITVTA 844
Fimbrial_CS1: domain 4 of 12, from 836 to 844: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 836 VGKKITVTA 844
NPCBM_assoc: domain 5 of 9, from 840 to 849: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 840 ITVTATYTDG 849
Big_2: domain 2 of 6, from 841 to 857: score 3.1, E = 3.2
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+++ + v
gi|7818920 841 TVTATYTDGHSTTESVV 857
Big_4: domain 2 of 7, from 841 to 880: score 1.9, E = 13
*->tVtvyysdGtvsteelkVtWdavdvdqy..akaGtfeVtGt<-*
tVt++y+dG st e V+ +++ v+++++a+ Gt+++ Gt
gi|7818920 841 TVTATYTDGH-STTESVVSAQTTSVANVndAPTGTVTISGT 880
Flocculin: domain 1 of 6, from 843 to 863: score 4.1, E = 4.4
*->TvtGTnGlpTtETiivvrTPt<-*
T t T+G +TtE ++ T+
gi|7818920 843 TATYTDGHSTTESVVSAQTTS 863
Wzz: domain 1 of 1, from 904 to 956: score 2.5, E = 3.1
*->Y.le.dgf.inGkVGq.lek.givtllvlisAkpgtefaesksrLka
Y+ + dg i+G+ G++l+ +
gi|7818920 904 YqWNaDGTaITGVIGEnLTLtE------------------------- 925
ikeLqkkitVaengkdtgiltvsvtgedpeeaakiansiaev<-*
+ kkitV t ++t+ + + + ++ + v
gi|7818920 926 -ALVGKKITV----------TATYTDGHGTTESVVSTATVAV 956
Fimbrial_CS1: domain 5 of 12, from 928 to 936: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 928 VGKKITVTA 936
NPCBM_assoc: domain 6 of 9, from 932 to 941: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 932 ITVTATYTDG 941
Porin_2: domain 1 of 1, from 932 to 966: score 0.0, E = 7.4
*->itaevnYtdldqkystvasvrgsdakpgteyeakkqDsvsGi<-*
it++++Ytd ++ + s+ +++t + a+ +D+ +G
gi|7818920 932 ITVTATYTD-GHGTT------ESVVSTATVAVANVNDAPTGT 966
Big_2: domain 3 of 6, from 933 to 949: score 1.9, E = 7
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+ + + v
gi|7818920 933 TVTATYTDGHGTTESVV 949
Big_4: domain 3 of 7, from 933 to 972: score 1.0, E = 23
*->tVtvyysdGtvsteelkVtWdavdvdqy..akaGtfeVtGt<-*
tVt++y+dG t e V+ +v+v+++++a+ Gt++++Gt
gi|7818920 933 TVTATYTDGH-GTTESVVSTATVAVANVndAPTGTVTINGT 972
DUF1554: domain 2 of 2, from 997 to 1020: score 0.2, E = 12
*->nSqPWtsgagnnlGqfGsant.tssni<-*
+ W+ + ++++G++G++ t t ++
gi|7818920 997 Q---WNADGTAITGAIGNSFTlTEAHV 1020
Fimbrial_CS1: domain 6 of 12, from 1020 to 1028: score 4.4, E = 0.23
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 1020 VSKKITVTA 1028
MucBP: domain 3 of 3, from 1020 to 1045: score 0.6, E = 20
*->ltktvtvTvhYvDedGnelapdvvQtvt<-*
+k++tvT Y D G++ ++vv ++t
gi|7818920 1020 VSKKITVTAIYTDGHGTT--ESVVSAAT 1045
DUF1174: domain 1 of 2, from 1021 to 1047: score 2.7, E = 10
*->ssEetttsAvtEasg.EEtttsAvtEa<-*
s t t+ t++ g+ E+++sA+t a
gi|7818920 1021 SKKITVTAIYTDGHGtTESVVSAATTA 1047
Big_4: domain 4 of 7, from 1025 to 1040: score 2.8, E = 7.2
*->tVtvyysdGtvsteelkV<-*
tVt+ y+dG + +++V
gi|7818920 1025 TVTAIYTDG--HGTTESV 1040
Amino_oxidase: domain 1 of 1, from 1030 to 1052: score 0.1, E = 5.9
CS CSSTTTTTSHHHHHHHHHHHHHHHH
*->htsggypgtveGAveSGlrAAaril<-*
+t+g+ gt e v ++ +A+a ++
gi|7818920 1030 YTDGH--GTTESVVSAATTAVANVN 1052
Flocculin: domain 2 of 6, from 1031 to 1047: score 2.6, E = 12
*->TnGlpTtETiivvrTPt<-*
T+G TtE ++ T++
gi|7818920 1031 TDGHGTTESVVSAATTA 1047
DUF1586: domain 2 of 4, from 1044 to 1057: score 4.9, E = 2.1
*->sRtALAAvsqtPtg<-*
+ tA+A v+ tPtg
gi|7818920 1044 ATTAVANVNDTPTG 1057
DUF1021: domain 5 of 9, from 1109 to 1120: score 3.1, E = 4.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 1109 ETHVGKKITVTA 1120
Fimbrial_CS1: domain 7 of 12, from 1112 to 1120: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 1112 VGKKITVTA 1120
NPCBM_assoc: domain 7 of 9, from 1116 to 1125: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 1116 ITVTATYTDG 1125
Big_2: domain 4 of 6, from 1117 to 1133: score 1.9, E = 7
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+ + + v
gi|7818920 1117 TVTATYTDGHGTTESVV 1133
Big_4: domain 5 of 7, from 1117 to 1161: score 0.5, E = 30
*->tVtvyysdGtvsteelkVtWdavdvdqy..akaGtfeVtGtVe.Gt<
tVt++y+dG t e V+ +++ v+++++a+ Gt+++tG + +G
gi|7818920 1117 TVTATYTDGH-GTTESVVSAQTTSVANVndAPTGTVTITGSATqGQ 1161
-*
gi|7818920 - -
Flocculin: domain 3 of 6, from 1119 to 1139: score 0.2, E = 48
*->TvtGTnGlpTtETiivvrTPt<-*
T t T+G TtE ++ T+
gi|7818920 1119 TATYTDGHGTTESVVSAQTTS 1139
Maf_N: domain 1 of 2, from 1167 to 1190: score 3.9, E = 2.4
*->phLEdLYWmatGayqQqlgpeaLn<-*
+ LEdL m + ayq q+++ a n
gi|7818920 1167 NTLEDLDGMGSVAYQWQADGMAIN 1190
PilS: domain 1 of 1, from 1190 to 1207: score 2.1, E = 3.2
*->gGSgagnssFtiTyanVPqd<-*
+G ++gn sFt+T+a V+++
gi|7818920 1190 NG-ATGN-SFTLTEAHVSKK 1207
Fimbrial_CS1: domain 8 of 12, from 1204 to 1212: score 4.4, E = 0.23
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 1204 VSKKITVTA 1212
DUF1174: domain 2 of 2, from 1205 to 1231: score 3.5, E = 6.5
*->ssEetttsAvtEasg.EEtttsAvtEa<-*
s t t+ t++ g+ E ++sA+t a
gi|7818920 1205 SKKITVTAIYTDGHGtTENVVSAATSA 1231
Big_4: domain 6 of 7, from 1209 to 1224: score 2.8, E = 7.1
*->tVtvyysdGtvsteelkV<-*
tVt+ y+dG + +++V
gi|7818920 1209 TVTAIYTDG--HGTTENV 1224
Flocculin: domain 4 of 6, from 1215 to 1231: score 1.5, E = 22
*->TnGlpTtETiivvrTPt<-*
T+G TtE ++ T++
gi|7818920 1215 TDGHGTTENVVSAATSA 1231
Noggin: domain 1 of 1, from 1288 to 1300: score -3.4, E = 7.3
*->nLdltdaenGkkh<-*
nL+lt+a+ Gkk+
gi|7818920 1288 NLTLTEAQVGKKI 1300
FeoA: domain 1 of 1, from 1289 to 1303: score 3.2, E = 4.6
CS EEHHHHCCSS-EEEE
*->mtLselkeGqkgrvv<-*
+tL+e+++G+k +vv
gi|7818920 1289 LTLTEAQVGKKITVV 1303
DUF1021: domain 6 of 9, from 1293 to 1304: score 0.0, E = 34
*->dahvGekvtlkA<-*
+a vG+k+t++A
gi|7818920 1293 EAQVGKKITVVA 1304
Fimbrial_CS1: domain 9 of 12, from 1296 to 1305: score 0.8, E = 4
*->VEKdITVTAs<-*
V K+ITV As
gi|7818920 1296 VGKKITVVAS 1305
Flocculin: domain 5 of 6, from 1308 to 1323: score 0.7, E = 37
*->nGlpTtETiivvrTPt<-*
+G +TtE ++ T+
gi|7818920 1308 DGHSTTENVVSAQTTS 1323
DUF1586: domain 3 of 4, from 1321 to 1333: score 1.3, E = 22
*->sRtALAAvsqtPtg<-*
t +A v+ tPtg
gi|7818920 1321 -TTSVANVNDTPTG 1333
DUF1359: domain 1 of 1, from 1382 to 1400: score 1.4, E = 7.7
*->MlsEikvDFrrnIekietKid<-*
Ml E+ v ++I + t +d
gi|7818920 1382 MLTETHV--GKQITVTATYTD 1400
DUF1021: domain 7 of 9, from 1385 to 1396: score 0.5, E = 24
*->dahvGekvtlkA<-*
++hvG+ +t++A
gi|7818920 1385 ETHVGKQITVTA 1396
Fimbrial_CS1: domain 10 of 12, from 1388 to 1396: score 2.5, E = 1
*->VEKdITVTA<-*
V K ITVTA
gi|7818920 1388 VGKQITVTA 1396
NPCBM_assoc: domain 8 of 9, from 1392 to 1401: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 1392 ITVTATYTDG 1401
Big_2: domain 5 of 6, from 1393 to 1409: score 1.2, E = 11
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+ + + v
gi|7818920 1393 TVTATYTDGHGTTENVV 1409
Big_4: domain 7 of 7, from 1393 to 1408: score 3.5, E = 4.6
*->tVtvyysdGtvsteelkV<-*
tVt++y+dG + +++V
gi|7818920 1393 TVTATYTDG--HGTTENV 1408
DUF1021: domain 8 of 9, from 1477 to 1488: score 3.1, E = 4.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 1477 ETHVGKKITVTA 1488
Fimbrial_CS1: domain 11 of 12, from 1480 to 1488: score 4.7, E = 0.17
*->VEKdITVTA<-*
V K+ITVTA
gi|7818920 1480 VGKKITVTA 1488
NPCBM_assoc: domain 9 of 9, from 1484 to 1493: score 0.5, E = 22
*->ltasAsYtvs<-*
+t++A+Yt++
gi|7818920 1484 ITVTATYTDG 1493
Big_2: domain 6 of 6, from 1485 to 1501: score 1.9, E = 7
CS EEEEEETT.TEEEEEEE
*->tItatsgdgnksasvtv<-*
t+tat+ dg+ + + v
gi|7818920 1485 TVTATYTDGHGTTESVV 1501
Flocculin: domain 6 of 6, from 1487 to 1507: score 0.2, E = 48
*->TvtGTnGlpTtETiivvrTPt<-*
T t T+G TtE ++ T+
gi|7818920 1487 TATYTDGHGTTESVVSAQTTS 1507
DUF1586: domain 4 of 4, from 1505 to 1517: score 1.3, E = 22
*->sRtALAAvsqtPtg<-*
t +A v+ tPtg
gi|7818920 1505 -TTSVANVNDTPTG 1517
DUF1021: domain 9 of 9, from 1569 to 1580: score 2.8, E = 5.6
*->dahvGekvtlkA<-*
++hvG+k+t++A
gi|7818920 1569 ETHVGKKITVVA 1580
Fimbrial_CS1: domain 12 of 12, from 1572 to 1581: score 0.8, E = 4
*->VEKdITVTAs<-*
V K+ITV As
gi|7818920 1572 VGKKITVVAS 1581
DUF88: domain 1 of 1, from 1573 to 1603: score 4.5, E = 1.1
*->GkrVevig......ltsdeLrnaaDrFidle<-*
Gk+++v+++ ++++t ++ ++aa+ i+l+
gi|7818920 1573 GKKITVVAsyidghSTTESVVSAATDIISLD 1603
CW_binding_2: domain 1 of 1, from 1589 to 1623: score 6.1, E = 0.36
*->gsnlvpaarkvikskntksviiIGgtesisnevens<-*
++++v+aa+++i++ +t ++I +t++i+n+++ s
gi|7818920 1589 TESVVSAATDIISLDDTTPPYLI-STTPINNSIGIS 1623
Cna_B: domain 1 of 1, from 1609 to 1631: score 2.3, E = 3.7
CS EEEEEEESSS-............EEEEEE
*->Ytltttpveftitensdgeeekivtvtit<-*
Y ++ttp++++i+ ++ + +t+t
gi|7818920 1609 YLISTTPINNSIGISTN------SNITLT 1631
Germane: domain 1 of 1, from 1617 to 1677: score 2.7, E = 4.6
*->llsvsvk.dgtatVDlSkeflnlhpggsgseealllasiVnTL.tqf
++s+ + ++ +t+ +S+++ + g g+ + l l+s + TL +
gi|7818920 1617 NNSIGIStNSNITLTFSEAINK----GNGTIA-LYLNSPTKTLvENY 1658
pgvdkVqilveGkplellg<-*
+ d V +++eG++l++ +
gi|7818920 1659 NVADNVNLSIEGNKLTINP 1677
DUF1921: domain 1 of 1, from 1632 to 1647: score 2.1, E = 2.4
CS -EEEEEETTTTEEEEE
*->fseAvnednGriRiWR<-*
fseA+n+ nG i ++
gi|7818920 1632 FSEAINKGNGTIALYL 1647
GAD: domain 1 of 1, from 1632 to 1644: score 2.4, E = 3.9
CS HHHCHHS TCEEE
*->Fsealkk.GGsVk<-*
Fsea++k++G+++
gi|7818920 1632 FSEAINKgNGTIA 1644
CBM_6: domain 1 of 1, from 1637 to 1661: score 4.7, E = 0.43
CS SSE..EEEEEEESSTTSSEEEEEEE-
*->ggggggsieirldsptGtlvGtvsVp<-*
+ g +g+i ++l+spt tlv +++V+
gi|7818920 1637 NKG-NGTIALYLNSPTKTLVENYNVA 1661
Bse634I: domain 1 of 1, from 1661 to 1679: score 0.3, E = 6.5
CS -SSEEEECCTTCEEEEE-HHH
*->snviekfaEngkgKfrINsan<-*
+++ + E++ K +IN+ +
gi|7818920 1661 ADNVNLSIEGN--KLTINPTA 1679
IWS1_C: domain 1 of 1, from 1664 to 1673: score 2.2, E = 2.6
*->vkvSiEGRkM<-*
v +SiEG+k+
gi|7818920 1664 VNLSIEGNKL 1673
DUF2501: domain 1 of 1, from 1681 to 1689: score 1.7, E = 0.83
*->LkQGkSFLl<-*
L+QGk++Ll
gi|7818920 1681 LEQGKNYLL 1689
DUF297: domain 1 of 1, from 1735 to 1755: score 2.4, E = 1.8
CS EEE-....SS--HHHHHT.SS-SEE
*->ayqLtgylQgadlneiaalspfdlv<-*
a++L Q++ + +++a++++dl+
gi|7818920 1735 ATPL----QDVSIVATSAMQTPDLL 1755
IFP_35_N: domain 1 of 1, from 1784 to 1794: score 0.7, E = 9.4
*->LkvlcpLqeGs<-*
++v +LqeGs
gi|7818920 1784 IQVELELQEGS 1794
Gemini_AC4_5: domain 1 of 1, from 1806 to 1813: score 3.1, E = 6.3
*->sirsTVtn<-*
s+++TVt+
gi|7818920 1806 SNWTTVTH 1813
CVNH: domain 1 of 1, from 1815 to 1822: score 1.3, E = 8.9
CS EETTEEEE
RF xxxxxxxx
*->NndGeLef<-*
Nn+G+++
gi|7818920 1815 NNNGHFVL 1822
DUF1122: domain 1 of 1, from 1839 to 1853: score 1.5, E = 2.6
CS TEEEEE.EEE.EE-SS
*->iGkvrLEskdIsQgrf<-*
G+++L s+ I Q rf
gi|7818920 1839 LGELTL-SAPIDQERF 1853
Death: domain 1 of 1, from 1885 to 1910: score 1.7, E = 8.8
CS HCHHHHHHHHHHCTHHHHHHHHHHHC
*->atvgtLleaLrklgrrdaaellesal<-*
++ +L+e L l+ + aa++l +a+
gi|7818920 1885 YSFTHLMESLYYLEANKAADALADAV 1910
Clp_N: domain 1 of 1, from 1889 to 1924: score 4.9, E = 1.5
CS HHHHHHTTSCTSHHHHHHHCTTS-HHHHHHHHHHHHH
*->HLLLALleeddGiaarlLkkaGvdldalreaiekllg<-*
HL+ L + + aa++L++a v+++++r+a++ ++g
gi|7818920 1889 HLMESLYYLEANKAADALADA-VTIEDARAALMIAVG 1924
Maf_N: domain 2 of 2, from 1889 to 1922: score 2.6, E = 6
*->phLEdLYWmatGayqQqlgpeaLnLtpEDAvEaLign<-*
+E LY + + + +++ a t EDA+ aL+ +
gi|7818920 1889 HLMESLYYLEA---NKAADALADAVTIEDARAALMIA 1922
Dockerin_1: domain 1 of 1, from 1943 to 1963: score 13.2, E = 0.0064
CS -TT-SS--SHHHHHHHHHHH-
*->DvNgDGkVnalDlallkkyll<-*
DvN+DGk+ a D++ + k+
gi|7818920 1943 DVNRDGKIRASDALTILKMAI 1963
IolB: domain 1 of 1, from 1969 to 1976: score 1.4, E = 5.3
*->paHeWlLe<-*
p+H+W++
gi|7818920 1969 PEHAWIFA 1976
Polyoma_coat2: domain 1 of 1, from 1991 to 2006: score 3.9, E = 0.57
*->dWdheVPvVgLyqqnN<-*
dW+h VP+V L+q++N
gi|7818920 1991 DWSHTVPTVLLNQESN 2006
//