hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 83310238.fa
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Query sequence: gi|83310238|ref|YP_420502.1|
Accession: [none]
Description: autotransporter adhesin [Magnetospirillum magneticum AMB-1]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
He_PIG Putative Ig domain 72.9 6.4e-20 5
PKD PKD domain 20.3 1.1e-05 6
SCPU Spore Coat Protein U domain 17.1 0.00044 4
PriCT_2 Primase C terminal 2 (PriCT-2) 9.7 0.028 4
Big_2 Bacterial Ig-like domain (group 2) 9.1 0.06 2
PARP Poly(ADP-ribose) polymerase catalytic 7.5 0.088 1
DAG1 Dystroglycan (Dystrophin-associated g 5.4 0.098 1
PLRV_ORF5 Potato leaf roll virus readthrough pr 5.8 0.11 1
LysM LysM domain 7.3 0.38 1
Collagen_bind Collagen binding domain 4.8 1 1
Miro Miro-like protein 4.3 1.1 3
AXH Ataxin-1 and HBP1 module (AXH) 3.4 1.2 1
tRNA-synt_2c tRNA synthetases class II (A) 2.2 1.4 2
PPC Bacterial pre-peptidase C-terminal do 4.4 1.5 1
Tir_receptor_N Translocated intimin receptor (Tir) N 2.6 1.6 1
Exonuc_X-T Exonuclease 2.5 1.9 1
DUF1247 Protein of unknown function (DUF1247) 1.8 2.2 1
DUF198 Uncharacterized ACR, COG1469 0.3 2.5 1
Gmad2 Immunoglobulin-like domain of bacteri 2.8 2.5 1
HYR HYR domain 3.0 2.9 2
A2M_N_2 Alpha-2-macroglobulin family N-termin 2.5 4.2 1
Pox_E6 Pox virus E6 protein -1.5 4.2 1
SoxZ Sulphur oxidation protein SoxZ 2.1 4.4 2
Glug The GLUG motif 3.0 4.7 2
DUF2124 Uncharacterized protein conserved in 1.6 4.9 1
S-AdoMet_synt_C S-adenosylmethionine synthetase, C-te 0.7 5 1
Chitin_synth_2 Chitin synthase -0.3 5.2 1
ALS_ss_C Small subunit of acetolactate synthas 3.3 5.2 2
QCR10 Ubiquinol-cytochrome-c reductase comp 3.4 5.3 2
STT3 Oligosaccharyl transferase STT3 subun -0.4 5.5 1
Drf_FH1 Formin Homology Region 1 1.1 5.5 1
DUF895 Eukaryotic protein of unknown functio 2.0 5.8 1
Ribosomal_S7 Ribosomal protein S7p/S5e 1.6 6.1 1
FliX Class II flagellar assembly regulator 0.2 6.7 1
DUF1356 Protein of unknown function (DUF1356) -0.9 7.2 1
DUF1504 Protein of unknown function (DUF1504) -1.3 7.5 1
Filamin Filamin/ABP280 repeat 1.8 7.5 1
DUF2267 Uncharacterized conserved protein (DU 1.3 7.9 1
Cadherin Cadherin domain 1.8 8.6 1
Ribophorin_II Ribophorin II (RPN2) -1.9 8.7 1
RNA_pol_Rpb5_C RNA polymerase Rpb5, C-terminal domai 1.5 9.2 1
Tellurium_res Tellurium resistance protein 0.4 9.2 1
DUF2016 Domain of unknown function (DUF2016) 1.5 9.4 1
CarD_TRCF CarD-like/TRCF domain 1.2 9.4 3
Mer2 Mer2 0.4 9.7 1
CcdA Post-segregation antitoxin CcdA 1.5 9.8 1
DUF689 Anamorsin family -0.0 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Pox_E6 1/1 1 8 [. 1 8 [. -1.5 4.2
DUF2016 1/1 37 51 .. 1 15 [. 1.5 9.4
DUF2267 1/1 173 187 .. 1 15 [. 1.3 7.9
Filamin 1/1 287 303 .. 76 92 .. 1.8 7.5
DUF895 1/1 360 372 .. 1 14 [. 2.0 5.8
PARP 1/1 404 433 .. 160 188 .. 7.5 0.088
tRNA-synt_2c 1/2 422 435 .. 596 609 .] 0.5 4.3
Chitin_synth_2 1/1 430 451 .. 527 548 .] -0.3 5.2
He_PIG 1/5 486 496 .. 51 61 .] 0.8 19
PKD 1/6 486 508 .. 71 92 .] 5.8 0.31
Miro 1/3 519 529 .. 1 11 [. 1.3 7.5
CarD_TRCF 1/3 531 538 .. 1 8 [. 0.5 16
DUF689 1/1 531 540 .. 358 367 .] -0.0 9.8
PKD 2/6 595 617 .. 71 92 .] 3.2 1.9
Ribosomal_S7 1/1 618 636 .. 79 97 .. 1.6 6.1
Miro 2/3 629 639 .. 1 11 [. 1.5 6.6
tRNA-synt_2c 2/2 640 655 .. 593 609 .] 1.7 2
CarD_TRCF 2/3 641 648 .. 1 8 [. 0.5 16
He_PIG 2/5 707 717 .. 51 61 .] 0.1 31
PKD 3/6 707 723 .. 71 88 .. 0.2 16
HYR 1/2 730 738 .. 1 10 [. 0.2 19
Miro 3/3 741 751 .. 1 11 [. 1.5 6.7
CarD_TRCF 3/3 753 760 .. 1 8 [. 0.3 18
DUF1247 1/1 771 783 .. 139 151 .] 1.8 2.2
A2M_N_2 1/1 851 871 .. 1 21 [. 2.5 4.2
CcdA 1/1 866 881 .. 1 16 [. 1.5 9.8
QCR10 1/2 887 900 .. 1 14 [. 3.3 5.3
LysM 1/1 908 915 .. 1 8 [. 7.3 0.38
He_PIG 3/5 917 1036 .. 36 61 .] 0.2 28
DUF1356 1/1 929 936 .. 238 245 .] -0.9 7.2
FliX 1/1 965 1004 .. 1 44 [. 0.2 6.7
DUF1504 1/1 972 997 .. 369 394 .. -1.3 7.5
RNA_pol_Rpb5_C 1/1 984 995 .. 64 75 .] 1.5 9.2
PPC 1/1 1018 1031 .. 72 85 .] 4.4 1.5
Gmad2 1/1 1019 1039 .. 75 98 .] 2.8 2.5
PKD 4/6 1020 1047 .. 66 92 .] 1.0 9.3
Collagen_bind 1/1 1068 1099 .. 115 152 .] 4.8 1
PriCT_2 1/4 1081 1092 .. 76 87 .] 1.6 7.6
SCPU 1/4 1087 1121 .. 4 48 .. 7.0 0.32
Glug 1/2 1171 1186 .. 22 38 .] 0.5 28
PriCT_2 2/4 1199 1212 .. 74 87 .] 2.8 3.2
SCPU 2/4 1207 1232 .. 4 28 .. 1.8 9.9
ALS_ss_C 1/2 1295 1303 .. 67 75 .] 1.2 20
PriCT_2 3/4 1316 1327 .. 76 87 .] 1.6 7.6
SCPU 3/4 1322 1348 .. 4 36 .. 2.2 7.6
Ribophorin_II 1/1 1361 1368 .. 1 8 [. -1.9 8.7
Tir_receptor_N 1/1 1377 1401 .. 248 272 .] 2.6 1.6
STT3 1/1 1420 1468 .. 823 874 .] -0.4 5.5
ALS_ss_C 2/2 1514 1522 .. 67 75 .] 2.2 11
PriCT_2 4/4 1529 1542 .. 74 87 .] 3.8 1.7
SCPU 4/4 1537 1566 .. 4 32 .. 6.2 0.56
S-AdoMet_synt_C 1/1 1591 1604 .. 1 15 [. 0.7 5
Glug 2/2 1689 1719 .. 1 38 [] 2.6 6.6
He_PIG 4/5 1761 1801 .. 1 61 [] 49.1 3.8e-13
Big_2 1/2 1772 1806 .. 53 90 .] 4.2 1.6
PKD 5/6 1785 1812 .. 66 92 .] 6.5 0.19
SoxZ 1/2 1791 1812 .. 83 104 .] 0.7 12
PLRV_ORF5 1/1 1813 1838 .. 1 29 [. 5.8 0.11
Tellurium_res 1/1 1813 1840 .. 1 25 [. 0.4 9.2
AXH 1/1 1849 1870 .. 44 65 .. 3.4 1.2
QCR10 2/2 1886 1896 .. 1 11 [. 0.0 43
Big_2 2/2 1927 1962 .. 1 42 [. 4.9 0.98
Drf_FH1 1/1 1935 1957 .. 137 159 .] 1.1 5.5
DAG1 1/1 1967 2024 .. 32 92 .. 5.4 0.098
DUF2124 1/1 1972 1981 .. 148 158 .] 1.6 4.9
DUF198 1/1 1982 1987 .. 299 304 .] 0.3 2.5
Exonuc_X-T 1/1 1983 1996 .. 175 188 .] 2.5 1.9
He_PIG 5/5 1994 2043 .. 1 61 [] 22.7 1.2e-05
Cadherin 1/1 2030 2055 .. 73 107 .] 1.8 8.6
HYR 2/2 2030 2054 .. 60 86 .] 2.8 3.4
PKD 6/6 2030 2054 .. 68 92 .] 3.6 1.5
SoxZ 2/2 2034 2054 .. 84 104 .] 1.4 7.1
Mer2 1/1 2099 2115 .. 206 226 .] 0.4 9.7
Alignments of top-scoring domains:
Pox_E6: domain 1 of 1, from 1 to 8: score -1.5, E = 4.2
*->MDFIRRKY<-*
M IRRKY
gi|8331023 1 MTVIRRKY 8
DUF2016: domain 1 of 1, from 37 to 51: score 1.5, E = 9.4
*->lDaaLqqsfPvVmVP<-*
+Daa ++ PvV++P
gi|8331023 37 ADAAAKALIPVVTAP 51
DUF2267: domain 1 of 1, from 173 to 187: score 1.3, E = 7.9
*->mdYdaFikqvearAg<-*
+d + Fi++++ar+g
gi|8331023 173 ADGQKFIDDLAARTG 187
Filamin: domain 1 of 1, from 287 to 303: score 1.8, E = 7.5
CS EEEE--SSSSEEEEEEE
*->tVsYtPtepGpYtvnVk<-*
+++++P ++G+Y++ V+
gi|8331023 287 AATFVPSVTGTYSIKVT 303
DUF895: domain 1 of 1, from 360 to 372: score 2.0, E = 5.8
*->LGfgflflFtAfds<-*
G++ ++++tA+ds
gi|8331023 360 -GTSYVVIMTAYDS 372
PARP: domain 1 of 1, from 404 to 433: score 7.5, E = 0.088
CS SS---.-SS--TT--EEEE-EEEEE. ..-
*->tkadysaeklppgkhStkGlGktaPa.wkD<-*
t a++s+++ p+g+ St+++G+t++a+w+D
gi|8331023 404 TDAKISITSTPTGTSSTYKVGDTVTArWDD 433
tRNA-synt_2c: domain 1 of 2, from 422 to 435: score 0.5, E = 4.3
CS XXXXXXXXXXXXXX
*->kvGdtVtavvDedr<-*
kvGdtVta+ D+
gi|8331023 422 KVGDTVTARWDDSA 435
Chitin_synth_2: domain 1 of 1, from 430 to 451: score -0.3, E = 5.2
*->rWeaqtskdtRSelsglsrkek<-*
rW++ +s d S+++g ++
gi|8331023 430 RWDDSASGDNQSGITGVTMDFS 451
He_PIG: domain 1 of 5, from 486 to 496: score 0.8, E = 19
*->tftvtatdgsg<-*
++ vtat+gsg
gi|8331023 486 NVSVTATNGSG 496
PKD: domain 1 of 6, from 486 to 508: score 5.8, E = 0.31
CS EEEEEEEETTCEEEEEE EEEEE
*->tVtLtvsngvgsasatt.ttvtV<-*
+V++t++ng gs+++ ++t+++V
gi|8331023 486 NVSVTATNGSGSTTTADtTNLKV 508
Miro: domain 1 of 3, from 519 to 529: score 1.3, E = 7.5
*->KvvviGdkgvG<-*
K+++ G +g+G
gi|8331023 519 KISISGATGTG 529
CarD_TRCF: domain 1 of 3, from 531 to 538: score 0.5, E = 16
*->eLkvGDyV<-*
++kvGD+V
gi|8331023 531 AFKVGDTV 538
DUF689: domain 1 of 1, from 531 to 540: score -0.0, E = 9.8
*->AFKPGEkVkL<-*
AFK+G++V+
gi|8331023 531 AFKVGDTVSA 540
PKD: domain 2 of 6, from 595 to 617: score 3.2, E = 1.9
CS EEEEEEEETTCEEEEEE EEEEE
*->tVtLtvsngvgsasatt.ttvtV<-*
+V++t ++++g++++ t+t+ ++
gi|8331023 595 NVSVTGTDDAGNSTSFTgTNNKI 617
Ribosomal_S7: domain 1 of 1, from 618 to 636: score 1.6, E = 6.1
CS HHHS-SEEEEEECSSSSEE
*->ieNvkPrvEVrsrRvGGat<-*
++N+kP v + ++ v+Gat
gi|8331023 618 VDNIKPTVTTAKISVSGAT 636
Miro: domain 2 of 3, from 629 to 639: score 1.5, E = 6.6
*->KvvviGdkgvG<-*
K++v G +g+G
gi|8331023 629 KISVSGATGTG 639
tRNA-synt_2c: domain 2 of 2, from 640 to 655: score 1.7, E = 2
CS XXXXXXXXXXXXXXXXX
*->GslkvGdtVtavvDedr<-*
G +kvGdtVta+ D
gi|8331023 640 GAFKVGDTVTASWD-NS 655
CarD_TRCF: domain 2 of 3, from 641 to 648: score 0.5, E = 16
*->eLkvGDyV<-*
++kvGD+V
gi|8331023 641 AFKVGDTV 648
He_PIG: domain 2 of 5, from 707 to 717: score 0.1, E = 31
*->tftvtatdgsg<-*
++ vtatd +g
gi|8331023 707 NVSVTATDNAG 717
PKD: domain 3 of 6, from 707 to 723: score 0.2, E = 16
CS EEEEEEEETTCEEEEEEE
*->tVtLtvsngvgsasattt<-*
+V++t+++++g+a++t +
gi|8331023 707 NVSVTATDNAGNATTT-A 723
HYR: domain 1 of 2, from 730 to 738: score 0.2, E = 19
*->vDttPPtven<-*
vD +PPtv +
gi|8331023 730 VDNQPPTV-T 738
Miro: domain 3 of 3, from 741 to 751: score 1.5, E = 6.7
*->KvvviGdkgvG<-*
K++v G +g+G
gi|8331023 741 KIAVSGASGTG 751
CarD_TRCF: domain 3 of 3, from 753 to 760: score 0.3, E = 18
*->eLkvGDyV<-*
++k+GD+V
gi|8331023 753 AFKIGDTV 760
DUF1247: domain 1 of 1, from 771 to 783: score 1.8, E = 2.2
*->aeDaDtvpyElMD<-*
+++aDt++ +MD
gi|8331023 771 DNNADTISGVTMD 783
A2M_N_2: domain 1 of 1, from 851 to 871: score 2.5, E = 4.2
*->LklsldkkeykvGetakvtvt<-*
++l++++yk+G+t+++t+t
gi|8331023 851 TSVALNTSTYKIGDTVTATIT 871
CcdA: domain 1 of 1, from 866 to 881: score 1.5, E = 9.8
*->tkQrvTVTVDrdlvnl<-*
+ +TV D+d++ l
gi|8331023 866 VTATITVSSDSDSYTL 881
QCR10: domain 1 of 2, from 887 to 900: score 3.3, E = 5.3
*->hfggitlktltkyg<-*
++g+t+ +ltk++
gi|8331023 887 TIAGFTFGNLTKTA 900
LysM: domain 1 of 1, from 908 to 915: score 7.3, E = 0.38
CS EE--TT--
*->YtVkkGDT<-*
YtV++GDT
gi|8331023 908 YTVQSGDT 915
He_PIG: domain 3 of 5, from 917 to 1036: score 0.2, E = 28
*->ritGtPtptvqp...................................
+i+G+Pt++v+ +++++ ++ +++ ++ + + + + +++ +++
gi|8331023 917 LISGSPTVNVVLvdgrgnassaytttvsnapitinahaptdvalsns 963
..................................................
+ +++++++ ++ ++++ +++++ + + +++++ + + ++++ +
gi|8331023 964 svsttggtnavvgnlsstdattgetfsyalvagagstdnasfnissgnlr 1013
.........Gsytftvtatdgsg<-*
++++ + G+y+++v td++g
gi|8331023 1014 andpnalgaGTYSVRVRSTDAAG 1036
DUF1356: domain 1 of 1, from 929 to 936: score -0.9, E = 7.2
*->VDCggNat<-*
VD +gNa+
gi|8331023 929 VDGRGNAS 936
FliX: domain 1 of 1, from 965 to 1004: score 0.2, E = 6.7
*->MrisGprgttaasggkakksrasGgksaFalplvaaagsaseta<-*
+s ++gt a+ g + + a+ g ++F+ +lva+ags++ ++
gi|8331023 965 --VSTTGGTNAVVGNLSST-DATTG-ETFSYALVAGAGSTDNAS 1004
DUF1504: domain 1 of 1, from 972 to 997: score -1.3, E = 7.5
*->NAlltYLvsllpglsdcykyllvaGa<-*
NA++ L s + + + y+lvaGa
gi|8331023 972 NAVVGNLSSTDATTGETFSYALVAGA 997
RNA_pol_Rpb5_C: domain 1 of 1, from 984 to 995: score 1.5, E = 9.2
CS SSSEEEEEEEE-
*->TaGesvyYRLVi<-*
T+Ge+ +Y LV+
gi|8331023 984 TTGETFSYALVA 995
PPC: domain 1 of 1, from 1018 to 1031: score 4.4, E = 1.5
CS CC.-SEEEEEEEEE
*->tapeaGtYyirVyg<-*
+a+ aGtY +rV++
gi|8331023 1018 NALGAGTYSVRVRS 1031
Gmad2: domain 1 of 1, from 1019 to 1039: score 2.8, E = 2.5
*->apaapgtgtleVfetSpsDGsgse<-*
a+ +gt+ ++V +t++ + + +
gi|8331023 1019 ALG-AGTYSVRVRSTDAAGNT--F 1039
PKD: domain 4 of 6, from 1020 to 1047: score 1.0, E = 9.3
CS . SEEEEEEEEEEETTCEEEEEE EEEEE
*->t.pGtYtVtLtvsngvgsasatt.ttvtV<-*
++GtY+V+++ ++++g ++ + ++vt
gi|8331023 1020 LgAGTYSVRVRSTDAAG-NTFDKvLSVTA 1047
Collagen_bind: domain 1 of 1, from 1068 to 1099: score 4.8, E = 1
CS EES-TT--......EEEEEEEEEE-BTTS--EEEEE--
*->tITdggkkqnesevsykNtAKIwyqtLngdnidgvenn<-*
+IT g++++ +yk+t+ I+ tL++d++ ++ +n
gi|8331023 1068 SITKGNAET-----YYKITG-ITGGTLYSDAAYTQAIN 1099
PriCT_2: domain 1 of 4, from 1081 to 1092: score 1.6, E = 7.6
*->ngiTiaTLfylA<-*
+giT++TL+ A
gi|8331023 1081 TGITGGTLYSDA 1092
SCPU: domain 1 of 4, from 1087 to 1121: score 7.0, E = 0.32
*->qLYqDsgrtevwgsGqkdvgsatlldtlglgtaqtnttqlpiYgr<-
+LY+D+++t++++ +g++++ + g+g+++t +Y r
gi|8331023 1087 TLYSDAAYTQAIN-----NGDFVAQGG-GGGNGTT----TNVYFR 1121
*
gi|8331023 - -
Glug: domain 1 of 2, from 1171 to 1186: score 0.5, E = 28
*->npgsienctatgnvtvt<-*
np++ e+ t+ + +t+t
gi|8331023 1171 NPTIAEDATSQA-ITIT 1186
PriCT_2: domain 2 of 4, from 1199 to 1212: score 2.8, E = 3.2
*->rpngiTiaTLfylA<-*
+ +giT++TL+ A
gi|8331023 1199 KVTGITGGTLYSDA 1212
SCPU: domain 2 of 4, from 1207 to 1232: score 1.8, E = 9.9
*->qLYqDsgrtevwgsGq.kdvgsatll<-*
+LY+D+g+t++++s + g+at++
gi|8331023 1207 TLYSDAGLTTQINSNDfVASGGATTT 1232
ALS_ss_C: domain 1 of 2, from 1295 to 1303: score 1.2, E = 20
*->TGvvAlaRG<-*
TG++A++R
gi|8331023 1295 TGAIAITRA 1303
PriCT_2: domain 3 of 4, from 1316 to 1327: score 1.6, E = 7.6
*->ngiTiaTLfylA<-*
+giT++TL+ A
gi|8331023 1316 TGITGGTLYSDA 1327
SCPU: domain 3 of 4, from 1322 to 1348: score 2.2, E = 7.6
*->qLYqDsgrtevwgsGqkdvgsatlldtlglgta<-*
+LY+D+g+t++++ +g++ + g++++
gi|8331023 1322 TLYSDAGYTTQIN-----NGDFIASAG-GTTNV 1348
Ribophorin_II: domain 1 of 1, from 1361 to 1368: score -1.9, E = 8.7
*->agnvrflV<-*
+gn++f+V
gi|8331023 1361 GGNGSFTV 1368
Tir_receptor_N: domain 1 of 1, from 1377 to 1401: score 2.6, E = 1.6
*->iGlAAtGiaqAlALtPEPDdPtttD<-*
+Gl ++ +ALtP D P t
gi|8331023 1377 AGLGGSTVISTVALTPIADTPSVTN 1401
STT3: domain 1 of 1, from 1420 to 1468: score -0.4, E = 5.5
*->mkdveeinfytstgvqkgpvGeyrldtkeaskkngnsllvkifysgk
++d +e+ ++ tg ++g+ ++++d +++ng++++ + + g
gi|8331023 1420 VVDGTEVTYFKITGITNGN--LFKTDG-TTQINNGDFITFAEGNAGL 1463
levkv<-*
++ +
gi|8331023 1464 KFMPT 1468
ALS_ss_C: domain 2 of 2, from 1514 to 1522: score 2.2, E = 11
*->TGvvAlaRG<-*
TG+vA++ G
gi|8331023 1514 TGAVAITKG 1522
PriCT_2: domain 4 of 4, from 1529 to 1542: score 3.8, E = 1.7
*->rpngiTiaTLfylA<-*
+ +giT++TL++ A
gi|8331023 1529 KVTGITGGTLYRDA 1542
SCPU: domain 4 of 4, from 1537 to 1566: score 6.2, E = 0.56
*->qLYqDsgrtevwgsGq.kdvgsatlldtlg<-*
+LY+D++ t++++sG +++g+ +++t++
gi|8331023 1537 TLYRDAAFTQAINSGDfIAQGGGGGNGTTT 1566
S-AdoMet_synt_C: domain 1 of 1, from 1591 to 1604: score 0.7, E = 5
*->iGGPqGDaGLtGRKi<-*
G DaGLtG +i
gi|8331023 1591 -SGSNADAGLTGNQI 1604
Glug: domain 2 of 2, from 1689 to 1719: score 2.6, E = 6.6
*->gnsavGGLvGgaegggrGeqenpgsienctatgnvtvt<-*
++s G++v++a++++ g + ++t+t+ +++
gi|8331023 1689 NGSTSGSFVAQASTSNAN-----GGLGGSTVTA--NIV 1719
He_PIG: domain 4 of 5, from 1761 to 1801: score 49.1, E = 3.8e-13
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
+y++ +gLP+GLt++++tG+i+G P+ +
gi|8331023 1761 SYSA-----------------SGLPTGLTINATTGAISGNPSAA--- 1787
Gsytftvtatdgsg<-*
G+ ++t+tatd++g
gi|8331023 1788 GTASVTITATDSHG 1801
Big_2: domain 1 of 2, from 1772 to 1806: score 4.2, E = 1.6
CS EEE....TTTEEEEE-SSS-EEEEEEETT.TEEEEEEE
*->tVsntnSgstGlVtalakGtatItatsgdgnksasvtv<-*
t++ t+ ++ + a+Gta +t t+ d +++a++t
gi|8331023 1772 TINATT--GAISGNPSAAGTASVTITATD-SHGATATK 1806
PKD: domain 5 of 6, from 1785 to 1812: score 6.5, E = 0.19
CS . SEEEEEEEEEEETTCEEEEEEEEEEE
*->t.pGtYtVtLtvsngvgsasattttvtV<-*
+ +Gt +Vt t++++ g+++++t ++t+
gi|8331023 1785 SaAGTASVTITATDSHGATATKTGSITI 1812
SoxZ: domain 1 of 2, from 1791 to 1812: score 0.7, E = 12
CS .EEEEEEETTS-EEEEEEEE--
*->elkfsWtDnkGssetaeakItv<-*
+++++ tD+ G + t++ +It+
gi|8331023 1791 SVTITATDSHGATATKTGSITI 1812
PLRV_ORF5: domain 1 of 1, from 1813 to 1838: score 5.8, E = 0.11
*->VDgePgPsPsPsPtPtPtPqPfPkPtPaP<-*
+P+P+P+P+PtP+P+P+ +PtPaP
gi|8331023 1813 ---QAAPAPAPAPAPTPAPTPTVEPTPAP 1838
Tellurium_res: domain 1 of 1, from 1813 to 1840: score 0.4, E = 9.2
*->paapaPaPtPappPappPp...paqppV<-*
+aapaPaP+Pap+Pap+P +++++p+V
gi|8331023 1813 QAAPAPAPAPAPTPAPTPTvepTPAPKV 1840
AXH: domain 1 of 1, from 1849 to 1870: score 3.4, E = 1.2
*->KsYGSdGLKtVerIesssfgps<-*
K+ G dGL+tV+r ++s++g++
gi|8331023 1849 KDKGADGLRTVVRDTGSGTGSG 1870
QCR10: domain 2 of 2, from 1886 to 1896: score 0.0, E = 43
*->hfggitlktlt<-*
f++it++t+t
gi|8331023 1886 SFATITIPTVT 1896
Big_2: domain 2 of 2, from 1927 to 1962: score 4.9, E = 0.98
CS EEEEEEETTT.TEEES--SEEETTSEEEEEEESTT....SBE
*->avtsvtvsptgntaslakGatlqlkatvtpsdasnkdiTkkv<-*
a svt++p+ +++ a+ + q+ + +p++a++ v
gi|8331023 1927 APASVTIIPA--VTTIAAPNAFQVAVASKPAGAGD----ALV 1962
Drf_FH1: domain 1 of 1, from 1935 to 1957: score 1.1, E = 5.5
*->PlgpgipPPpsfgvgvstlPalP<-*
P +i P +f+v+v++ Pa
gi|8331023 1935 PAVTTIAAPNAFQVAVASKPAGA 1957
DAG1: domain 1 of 1, from 1967 to 2024: score 5.4, E = 0.098
CS XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX..X..XXX
*->lpdssavvGraFrlhvptellassedqGiikiseadKdgheLkapsw
l d +v Gr ++vp +++a+ ++ +++ +g L psw
gi|8331023 1967 LKDAFVVDGRI-SVTVPHDAFADTKANATVTLAAQQLNGAAL--PSW 2010
CS XXXXXXXXXXXXXX
LhwdadsrtLqGLP<-*
+ ++ + +t +G P
gi|8331023 2011 MSFNPQTGTFEGTP 2024
DUF2124: domain 1 of 1, from 1972 to 1981: score 1.6, E = 4.9
*->lIDadIePVtV<-*
++D+ I+ VtV
gi|8331023 1972 VVDGRIS-VTV 1981
DUF198: domain 1 of 1, from 1982 to 1987: score 0.3, E = 2.5
*->nHdAvA<-*
+HdA+A
gi|8331023 1982 PHDAFA 1987
Exonuc_X-T: domain 1 of 1, from 1983 to 1996: score 2.5, E = 1.9
CS SSHHHHHHHHHHHH
*->HrAldDArataelf<-*
H+A +D++a+a +
gi|8331023 1983 HDAFADTKANATVT 1996
He_PIG: domain 5 of 5, from 1994 to 2043: score 22.7, E = 1.2e-05
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
t+tl ++ g +LPs+++++++tG++ GtP+p+
gi|8331023 1994 TVTL----------AAQQLNGAALPSWMSFNPQTGTFEGTPPPGFK- 2029
Gsytftvtatdgsg<-*
G+ + v a d g
gi|8331023 2030 GEVVVKVVARDNDG 2043
Cadherin: domain 1 of 1, from 2030 to 2055: score 1.8, E = 8.6
CS S-B--EEE----.........S---EEEE--EEE-
*->geYeLtveAtDadpllasgggpplsstatvtitVl<-*
ge+++ v+A+D+d +++++ t i V
gi|8331023 2030 GEVVVKVVARDND---------GREAVQTFKIVVG 2055
HYR: domain 2 of 2, from 2030 to 2054: score 2.8, E = 3.4
*->GEettVtYtatDnaGNeAdsCtFtVtV<-*
G e +V +a+Dn G eA tF++ V
gi|8331023 2030 G-EVVVKVVARDNDGREA-VQTFKIVV 2054
PKD: domain 6 of 6, from 2030 to 2054: score 3.6, E = 1.5
CS EEEEEEEEEEETTCEEEEEEEEEEE
*->GtYtVtLtvsngvgsasattttvtV<-*
G+ V++++ ++ g +++t ++V
gi|8331023 2030 GEVVVKVVARDNDGREAVQTFKIVV 2054
SoxZ: domain 2 of 2, from 2034 to 2054: score 1.4, E = 7.1
CS EEEEEEETTS-EEEEEEEE--
*->lkfsWtDnkGssetaeakItv<-*
+k++ +Dn+G++ + kI+v
gi|8331023 2034 VKVVARDNDGREAVQTFKIVV 2054
Mer2: domain 1 of 1, from 2099 to 2115: score 0.4, E = 9.7
*->SlskDlhNiDLaLskRQaqlE<-*
Sls++l+ a sk+ + +
gi|8331023 2099 SLSEQLR----AMSKEGRLAK 2115
//