hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 83645945.fa
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Query sequence: gi|83645945|ref|YP_434380.1|
Accession: [none]
Description: outer membrane protein domain-containing protein [Hahella chejuensis KCTC 2396]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Fil_haemagg Haemagluttinin repeat 26.4 7.1e-07 6
He_PIG Putative Ig domain 13.1 0.0063 4
BiPBP_C Penicillin-Binding Protein C-terminus 7.8 0.12 2
DUF2158 Uncharacterized small protein (DUF215 7.0 0.43 2
ApbA Ketopantoate reductase PanE/ApbA 4.9 0.51 1
Mog1 Ran-interacting Mog1 protein 4.2 0.66 1
PKD PKD domain 4.2 0.92 1
Fim-adh_lectin Fimbrial adhesin F17-AG, lectin domai 1.9 1.3 1
DUF2530 Protein of unknown function (DUF2530) 3.4 1.3 1
LpxD UDP-3-O-[3-hydroxymyristoyl] glucosam 4.2 1.6 1
DUF1775 Domain of unkown function (DUF1775) 2.9 1.6 1
CAP160 CAP160 repeat 5.4 1.8 1
Neocarzinostat Neocarzinostatin family 2.6 1.9 2
PhoD PhoD-like phosphatase 1.2 2.5 1
Big_2 Bacterial Ig-like domain (group 2) 3.3 2.8 1
Enolase_N Enolase, N-terminal domain 2.2 2.9 1
YSIRK_signal YSIRK type signal peptide 4.7 3.1 1
LysM LysM domain 4.1 3.3 1
DUF1889 Domain of unknown function (DUF1889) 1.4 3.5 1
PA14 PA14 domain 2.1 3.7 1
HYR HYR domain 2.6 3.8 2
Haemagg_act haemagglutination activity domain 2.2 3.8 2
Gp5_C Gp5 C-terminal repeat (3 copies) 4.1 3.9 1
IgG_binding_B B domain 2.8 4.3 1
DUF2003 Eukaryotic protein of unknown functio -1.4 4.3 1
GDPD Glycerophosphoryl diester phosphodies -0.1 4.7 1
DUF1261 Protein of unknown function (DUF1261) 2.0 4.7 1
Pertussis_S2S3 Pertussis toxin, subunit 2 and 3, C-t 0.9 5 1
DUF2169 Uncharacterized protein conserved in 0.5 5.4 1
VMA21 VMA21-like domain 2.6 5.6 1
RTX_C RTX C-terminal domain 1.6 5.6 1
Xin Xin repeat 4.5 6.2 3
Cytochrom_NNT NapC/NirT cytochrome c family, N-term 1.5 6.3 1
DUF481 Protein of unknown function, DUF481 2.8 6.3 1
META META domain 2.6 6.6 1
Linker_histone linker histone H1 and H5 family 2.9 6.7 2
ETX_MTX2 Clostridium epsilon toxin ETX/Bacillu 0.7 6.7 1
DUF1240 Protein of unknown function (DUF1240) 0.7 6.8 1
HEM4 Uroporphyrinogen-III synthase HemD 1.0 7.2 1
DUF1857 Domain of unknown function (DUF1857) 0.8 7.3 1
DUF276 DUF276 0.1 7.3 1
BNIP3 BNIP3 1.0 7.5 1
SseC Secretion system effector C (SseC) li -1.0 7.5 1
ArabFuran-catal Alpha-L-arabinofuranosidase B, cataly -1.4 7.6 1
A2M_N_2 Alpha-2-macroglobulin family N-termin 1.5 7.7 1
GntP_permease GntP family permease -0.2 7.8 1
CheC CheC-like family 3.4 8 1
DUF291 Domain of unknown function 2.5 8.1 1
Cleaved_Adhesin Cleaved Adhesin Domain 0.6 8.4 1
Cloacin Cloacin -0.2 8.6 1
Pectate_lyase Pectate lyase -0.1 8.7 1
DUF630 Protein of unknown function (DUF630) 1.3 8.9 1
Semialdhyde_dh Semialdehyde dehydrogenase, NAD bindi 0.7 9 1
Peptidase_S6 Immunoglobulin A1 protease -1.2 9.1 1
YbbR YbbR-like protein 1.5 9.1 1
Triadin Triadin -0.7 9.2 1
Pollen_allerg_1 Pollen allergen 1.3 9.3 1
Fasciclin Fasciclin domain 0.5 9.6 1
DnaJ DnaJ domain 1.5 9.8 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF2530 1/1 35 46 .. 68 78 .] 3.4 1.3
HEM4 1/1 83 108 .. 235 260 .] 1.0 7.2
DnaJ 1/1 97 104 .. 68 75 .] 1.5 9.8
DUF2003 1/1 112 121 .. 440 449 .] -1.4 4.3
DUF630 1/1 137 146 .. 51 60 .] 1.3 8.9
LpxD 1/1 161 174 .. 1 14 [. 4.2 1.6
GDPD 1/1 166 182 .. 16 32 .. -0.1 4.7
PhoD 1/1 172 209 .. 541 586 .] 1.2 2.5
DUF1261 1/1 176 190 .. 119 137 .] 2.0 4.7
DUF1775 1/1 225 233 .. 70 78 .] 2.9 1.6
BNIP3 1/1 302 315 .. 208 222 .] 1.0 7.5
Enolase_N 1/1 322 363 .. 1 41 [. 2.2 2.9
Cleaved_Adhesin 1/1 390 399 .. 185 194 .] 0.6 8.4
DUF2169 1/1 468 477 .. 307 316 .] 0.5 5.4
Big_2 1/1 493 520 .. 1 30 [. 3.3 2.8
DUF1240 1/1 495 501 .. 1 7 [. 0.7 6.8
CAP160 1/1 551 577 .. 1 27 [] 5.4 1.8
Xin 1/3 567 581 .. 2 16 .] 1.0 62
Neocarzinostat 1/2 656 667 .. 7 18 .. 1.6 4.1
ArabFuran-catal 1/1 660 680 .. 311 331 .] -1.4 7.6
Xin 2/3 669 684 .. 1 16 [] 2.2 28
Mog1 1/1 714 726 .. 135 147 .] 4.2 0.66
Neocarzinostat 2/2 749 757 .. 1 9 [. 1.0 6.3
PA14 1/1 920 950 .. 140 178 .] 2.1 3.7
Haemagg_act 1/2 942 975 .. 1 37 [. 1.9 4.8
DUF276 1/1 948 970 .. 270 292 .] 0.1 7.3
META 1/1 1019 1036 .. 88 105 .] 2.6 6.6
Fil_haemagg 1/6 1084 1139 .. 1 60 [. 7.2 0.24
Pertussis_S2S3 1/1 1116 1145 .. 1 27 [. 0.9 5
Fil_haemagg 2/6 1140 1214 .. 1 75 [] 4.9 1.1
Fil_haemagg 3/6 1231 1318 .. 1 75 [] 1.8 8.6
Peptidase_S6 1/1 1277 1292 .. 902 919 .] -1.2 9.1
GntP_permease 1/1 1286 1301 .. 449 465 .] -0.2 7.8
VMA21 1/1 1296 1321 .. 32 57 .. 2.6 5.6
Fil_haemagg 4/6 1319 1405 .. 1 75 [] 9.6 0.049
Cloacin 1/1 1325 1337 .. 1 13 [. -0.2 8.6
Haemagg_act 2/2 1337 1358 .. 118 139 .] 0.4 14
He_PIG 1/4 1404 1430 .. 34 61 .] 0.7 21
Fil_haemagg 5/6 1406 1480 .. 1 75 [] 1.7 9.4
Cytochrom_NNT 1/1 1430 1458 .. 1 30 [. 1.5 6.3
ApbA 1/1 1442 1483 .. 125 170 .] 4.9 0.51
YSIRK_signal 1/1 1448 1460 .. 15 27 .] 4.7 3.1
Gp5_C 1/1 1546 1569 .. 1 24 [] 4.1 3.9
YbbR 1/1 1571 1607 .. 1 38 [. 1.5 9.1
Fim-adh_lectin 1/1 1575 1585 .. 1 11 [. 1.9 1.3
DUF291 1/1 1580 1589 .. 81 92 .] 2.5 8.1
Linker_histone 1/2 1602 1615 .. 66 78 .] 1.4 17
DUF2158 1/2 1611 1618 .. 1 8 [. 4.1 2.8
Xin 3/3 1614 1621 .. 1 8 [. 1.4 47
He_PIG 2/4 1664 1686 .. 40 61 .] 6.1 0.61
ETX_MTX2 1/1 1669 1693 .. 254 278 .] 0.7 6.7
Pectate_lyase 1/1 1684 1709 .. 1 30 [. -0.1 8.7
DUF2158 2/2 1723 1730 .. 1 8 [. 2.9 5.8
SseC 1/1 1741 1767 .. 1 28 [. -1.0 7.5
He_PIG 3/4 1776 1797 .. 36 61 .] 5.3 1
Fasciclin 1/1 1785 1810 .. 1 29 [. 0.5 9.6
Pollen_allerg_1 1/1 1801 1815 .. 71 86 .] 1.3 9.3
Semialdhyde_dh 1/1 1821 1833 .. 1 13 [. 0.7 9
A2M_N_2 1/1 1822 1852 .. 1 29 [. 1.5 7.7
Linker_histone 2/2 1825 1838 .. 66 78 .] 1.5 16
DUF481 1/1 1840 1867 .. 205 232 .] 2.8 6.3
He_PIG 4/4 1889 1910 .. 36 61 .] 1.1 16
HYR 1/2 1904 1913 .. 68 77 .. 0.9 12
DUF1889 1/1 1923 1943 .. 35 55 .. 1.4 3.5
HYR 2/2 1923 1936 .. 1 14 [. 1.7 6.9
Fil_haemagg 6/6 1959 2015 .. 1 75 [] 1.2 13
DUF1857 1/1 1989 1995 .. 1 7 [. 0.8 7.3
LysM 1/1 1992 1998 .. 1 7 [. 4.1 3.3
BiPBP_C 1/2 2017 2030 .. 80 94 .] 5.4 0.57
RTX_C 1/1 2072 2109 .. 155 194 .] 1.6 5.6
Triadin 1/1 2093 2110 .. 1 18 [. -0.7 9.2
IgG_binding_B 1/1 2111 2130 .. 37 56 .] 2.8 4.3
BiPBP_C 2/2 2123 2139 .. 78 94 .] 2.4 4.4
PKD 1/1 2123 2141 .. 73 92 .] 4.2 0.92
CheC 1/1 2131 2153 .. 15 38 .] 3.4 8
Alignments of top-scoring domains:
DUF2530: domain 1 of 1, from 35 to 46: score 3.4, E = 1.3
*->RRG.sRGAQsGL<-*
RRG+sRGA sGL
gi|8364594 35 RRGsSRGADSGL 46
HEM4: domain 1 of 1, from 83 to 108: score 1.0, E = 7.2
*->akeLqeekgiksvipeeytlkgllea<-*
a +++e +i++ +pe++++ ++le+
gi|8364594 83 AAAIRELVIIDDAVPEKRRIYEKLEP 108
DnaJ: domain 1 of 1, from 97 to 104: score 1.5, E = 9.8
CS HHHHHHHH
*->pekRaiYD<-*
pekR+iY
gi|8364594 97 PEKRRIYE 104
DUF2003: domain 1 of 1, from 112 to 121: score -1.4, E = 4.3
*->FasLKPGsKG<-*
Fa+L+PG G
gi|8364594 112 FATLRPGEDG 121
DUF630: domain 1 of 1, from 137 to 146: score 1.3, E = 8.9
*->ALrrFaegEt<-*
AL+ F+++E+
gi|8364594 137 ALHVFSHAED 146
LpxD: domain 1 of 1, from 161 to 174: score 4.2, E = 1.6
*->gdleIsglApLeeA<-*
++eI+ lA+L++A
gi|8364594 161 LSREINTLASLDQA 174
GDPD: domain 1 of 1, from 166 to 182: score -0.1, E = 4.7
CS TSHHHHHHHHHTT-SEE
*->NTllafrkAveaGADyi<-*
NTl+++++A +GAD++
gi|8364594 166 NTLASLDQAMQDGADVM 182
PhoD: domain 1 of 1, from 172 to 209: score 1.2, E = 2.5
*->daimtanPelKFinAPlvQNlsPfaGnskrGyVtieltsgaatsdL<
d+ m+ + ++F+ l+Q s +G++++el s +a++d
gi|8364594 172 DQAMQDGADVMFYGCNLAQ--------SEKGEALLELVSAKARVDV 209
-*
gi|8364594 - -
DUF1261: domain 1 of 1, from 176 to 190: score 2.0, E = 4.7
*->aCgpVksneagwwgCEyaR<-*
++g +++++gC+ a
gi|8364594 176 QDGA----DVMFYGCNLAQ 190
DUF1775: domain 1 of 1, from 225 to 233: score 2.9, E = 1.6
*->WkveiqKgk<-*
W++ei+Kg+
gi|8364594 225 WDLEIKKGD 233
BNIP3: domain 1 of 1, from 302 to 315: score 1.0, E = 7.5
*->IYIGrRLtTPsaSTy<-*
IYIG R +T ++S+
gi|8364594 302 IYIGTRDST-QTSSS 315
Enolase_N: domain 1 of 1, from 322 to 363: score 2.2, E = 2.9
CS EEEEEEEEEE-TTS-EEEEEEEEETTEE EEEE--B-SSS-T
*->aivkihaRqilDsRGnPtvEvdlttekG.lfraavPsGAstG<-*
+ ++ + +++ G Pt + +t +kG+ + + P AstG
gi|8364594 322 ETFSLNSLYVYHGFGAPTKTIRITSSKGgTQDSTGPVAASTG 363
Cleaved_Adhesin: domain 1 of 1, from 390 to 399: score 0.6, E = 8.4
*->EfLkLDDVtv<-*
++LkLD +++
gi|8364594 390 DWLKLDNISI 399
DUF2169: domain 1 of 1, from 468 to 477: score 0.5, E = 5.4
*->darrvsLvWR<-*
d++r+ ++WR
gi|8364594 468 DTERGNIIWR 477
Big_2: domain 1 of 1, from 493 to 520: score 3.3, E = 2.8
CS EEEEEEETTT.TEEES--SEEETTSEEEEE
*->avtsvtvsptgntaslakGatlqlkatvtp<-*
+ +++t+s+ ++s+a + ++++++ + +
gi|8364594 493 VSDTITFSSL--SISVADNTSETYTVSGYY 520
DUF1240: domain 1 of 1, from 495 to 501: score 0.7, E = 6.8
*->DkIiFSw<-*
D+I+FS+
gi|8364594 495 DTITFSS 501
CAP160: domain 1 of 1, from 551 to 577: score 5.4, E = 1.8
*->lssatavvadkavaAknvvaskLGygg<-*
++s ++v++ a +v askL ++
gi|8364594 551 MASGQSAVTNGSGATLDVTASKLTFST 577
Xin: domain 1 of 3, from 567 to 581: score 1.0, E = 62
*->DVkttrwlFETqpLd<-*
DV +++ F Tqp
gi|8364594 567 DVTASKLTFSTQPAG 581
Neocarzinostat: domain 1 of 2, from 656 to 667: score 1.6, E = 4.1
CS -SSB-TTEEEEE
*->AsGLSDGqtVtV<-*
AsGLSDG++ tV
gi|8364594 656 ASGLSDGTSNTV 667
ArabFuran-catal: domain 1 of 1, from 660 to 680: score -1.4, E = 7.6
*->SDAtensVQanvVAakYatgs<-*
SD t n V +vVA + +
gi|8364594 660 SDGTSNTVTSDVVATQLRFST 680
Xin: domain 2 of 3, from 669 to 684: score 2.2, E = 28
*->GDVkttrwlFETqpLd<-*
DV +t+ F Tqp
gi|8364594 669 SDVVATQLRFSTQPAP 684
Mog1: domain 1 of 1, from 714 to 726: score 4.2, E = 0.66
*->yqTDLlltfNqPl<-*
y TD++l++ +P
gi|8364594 714 YSTDIVLSVTDPN 726
Neocarzinostat: domain 2 of 2, from 749 to 757: score 1.0, E = 6.3
CS EEEEES-SS
*->avsVsPAsG<-*
+v+ +P+sG
gi|8364594 749 TVTLTPSSG 757
PA14: domain 1 of 1, from 920 to 950: score 2.1, E = 3.7
CS EEEEE-S---SSCB--.....BEEEE-TTS-EEE--TTT
*->rieYfeaggggsllpekihgtslsWtspdgakeaidedv<-*
ri Y + +gg s+++t +dg+k++ ++++
gi|8364594 920 RITYRNDTPGGDA--------SVRFTLSDGSKSTTADAS 950
Haemagg_act: domain 1 of 2, from 942 to 975: score 1.9, E = 4.8
CS X---EE-TT-EEE-...-TTS--EEE-----TTSEEE
*->aqslpdgglvtngtvtiqatgvpitggtipqtsgnlf<-*
+ s+ + ++v+ ++i++t ++++i+ t+g++f
gi|8364594 942 SKSTTADASVQSDSIYITNT---TDTASIDRTDGVSF 975
DUF276: domain 1 of 1, from 948 to 970: score 0.1, E = 7.3
*->DisikdDtillFNttkRLLIdrd<-*
D s++ D i + Ntt+ Idr
gi|8364594 948 DASVQSDSIYITNTTDTASIDRT 970
META: domain 1 of 1, from 1019 to 1036: score 2.6, E = 6.6
*->LsavtsysveggtLtLtn<-*
L +++ ++++ggtLtL +
gi|8364594 1019 LDSASGATISGGTLTLGG 1036
Fil_haemagg: domain 1 of 6, from 1084 to 1139: score 7.2, E = 0.24
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++aGal+++ + ++ + g ++ +gg+lt+t+ ++nn+ +a
gi|8364594 1084 ISAGALSIASD----SNVGSGQLVLNGGTLTVTGSTTINNAIHVAAD 1126
CS .............
gdlllaagalrng<-*
++ ++++ ++g
gi|8364594 1127 STFSVSSNVTASG 1139
Pertussis_S2S3: domain 1 of 1, from 1116 to 1145: score 0.9, E = 5
CS SEEE--S---EEEE CCEEEEEEEEETT
*->tirktGqPAaDHYY...skvtAtRLLastn<-*
ti + AaD ++ +s+vtA LL+ n
gi|8364594 1116 TINNAIHVAADSTFsvsSNVTASGLLSGSN 1145
Fil_haemagg: domain 2 of 6, from 1140 to 1214: score 4.9, E = 1.1
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE-S-EEESSE...
*->vaaGaltlnaa.alggldlnnggtlsagggltltaagllnnggtlia
++G++ l+ ++a++ + +n+g + s +g+ t++a+ l ++ ++
gi|8364594 1140 LLSGSNPLTKTgASTLTLSNTGNAASFSGAMTVSAGTLAVSSDANLS 1186
CS ................EEEEESS-EEEEE
ggdlllaagalrnggdltltaaGdLdnsg<-*
+g ++l++g l+ +g +t t ++++ +++
gi|8364594 1187 SGVITLDSGVLNLTG-ATFTVDNAIVLGA 1214
Fil_haemagg: domain 3 of 6, from 1231 to 1318: score 1.8, E = 8.6
CS EEESSEEEETT TT--EE-SEEEEEE-STT-EEEE
*->vaaGaltlnaa.............alggldlnnggtlsagggltlta
v++G+++ + ++++ + + +++ ++g++ ++++g++ ++ + ++
gi|8364594 1231 VVSGSGSFSKTggpaltlsatntyTGGTSINGTNGLIITDSANLGSG 1277
CS -S-EE ESSE...................EEEEESS-EEEEE
aglln.nggtliaggdlllaagalrnggdltltaaGdLdnsg<-*
+ +l n g+++++a++ + g+ +tl++a+d+++sg
gi|8364594 1278 NVTLKvNSLLSVTGSGVTIANNLVMEGD-ATLSNANDITWSG 1318
Peptidase_S6: domain 1 of 1, from 1277 to 1292: score -1.2, E = 9.1
*->gnvsvtlkahslftlsgs<-*
gn vtlk +sl++ +gs
gi|8364594 1277 GN--VTLKVNSLLSVTGS 1292
GntP_permease: domain 1 of 1, from 1286 to 1301: score -0.2, E = 7.8
*->IlSvvGLifvLiLlsLv<-*
+lSv+G ++++ + +Lv
gi|8364594 1286 LLSVTGSGVTI-ANNLV 1301
VMA21: domain 1 of 1, from 1296 to 1321: score 2.6, E = 5.6
*->ilknyvleglfglsrsdattySGilA<-*
i +n+v+eg ++ls+++ t+SG+++
gi|8364594 1296 IANNLVMEGDATLSNANDITWSGVIS 1321
Fil_haemagg: domain 4 of 6, from 1319 to 1405: score 9.6, E = 0.049
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
v++G++ l+ + g+++l+ +g+ +ggl++t +++ +g++ +++
gi|8364594 1319 VISGSGALAKS--GAGTLTLSGSQTQTGGLSITTGSVSIAGDSNLGS 1363
CS .............. .EEEEESS-EEEEE
gdlllaagalrngg..............dltltaaGdLdnsg<-*
g+l+l++g+l+ +g++ + ++ + +++++t+++a L++sg
gi|8364594 1364 GTLTLDGGSLIVTGsgitvdnalslggsNGTISNASSLTWSG 1405
Cloacin: domain 1 of 1, from 1325 to 1337: score -0.2, E = 8.6
*->aLatpgagglavS<-*
aLa+ gag+l +S
gi|8364594 1325 ALAKSGAGTLTLS 1337
Haemagg_act: domain 2 of 2, from 1337 to 1358: score 0.4, E = 14
CS EEEEESEEEEEEE-SEEEEETT
*->ggAfiNvgglfvtTgaisikff<-*
+g+++ +ggl tTg++si
gi|8364594 1337 SGSQTQTGGLSITTGSVSIAGD 1358
He_PIG: domain 1 of 4, from 1404 to 1430: score 0.7, E = 21
*->tGritGt..PtptvqpGsytftvtatdgsg<-*
+G i+G+++ t+t G+ t t++at++ +
gi|8364594 1404 SGVISGSggLTKT---GAGTLTLSATNTNT 1430
Fil_haemagg: domain 5 of 6, from 1406 to 1480: score 1.7, E = 9.4
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
v++G++ l+ + g+++l+ ++t ++g+++l+a+ l+ g++ g
gi|8364594 1406 VISGSGGLTKT--GAGTLTLSATNTNTGTIALSAGTLDVSGAV---G 1447
CS .............. .EEEEESS-EEEEE
gdlllaagalrngg.....dltltaaGdLdnsg<-*
g++ +a+g+ +gg++ ++ +t++++G+L+ ++
gi|8364594 1448 GAVSVASGTTLQGGgsiggLVTVSSGGTLQIGS 1480
Cytochrom_NNT: domain 1 of 1, from 1430 to 1458: score 1.5, E = 6.3
*->rpslrksllaLllvGiviGivfwggfntgl<-*
+ +s+++L + G+v+G+v ++++ t+l
gi|8364594 1430 TGTIALSAGTLDVSGAVGGAV-SVASGTTL 1458
ApbA: domain 1 of 1, from 1442 to 1483: score 4.9, E = 0.51
CS HTTTS...-GG GEEEEEE----EEEETTEEEE-S.---EEEEESSG
*->lrealfnepre.rvlgGvtthgatregpGhvhhtGvpGrtviGelpg
++ a+ +++ v+ G+t g++ g G v + G++ iG+ pg
gi|8364594 1442 VSGAV---GGAvSVASGTTLQGGGSIG-GLVTVSS-GGTLQIGSSPG 1483
CS
<-*
gi|8364594 - -
YSIRK_signal: domain 1 of 1, from 1448 to 1460: score 4.7, E = 3.1
*->GvaSVliGtllll<-*
G++SV+ Gt+l +
gi|8364594 1448 GAVSVASGTTLQG 1460
Gp5_C: domain 1 of 1, from 1546 to 1569: score 4.1, E = 3.9
CS S-EEEEESS-EEEEESSEEEEEES
*->GnesltVkGnrtvtVgGnqTtsVg<-*
++s+ V+G ++ + +G+++t+++
gi|8364594 1546 NDASDAVSGIFNGLSEGDKSTTLN 1569
YbbR: domain 1 of 1, from 1571 to 1607: score 1.5, E = 9.1
*->vPvePvtvkgtgelaegyvvssvtp..dpvkVtvtGpesv<-*
vP+ tv +g+ +++++++ v p+ ++++++G++++
gi|8364594 1571 VPL---TVSYLGSSGNDVTLTVVPPtvTDARISISGASGT 1607
Fim-adh_lectin: domain 1 of 1, from 1575 to 1585: score 1.9, E = 1.3
*->vsFiGstEnDv<-*
vs++Gs nDv
gi|8364594 1575 VSYLGSSGNDV 1585
DUF291: domain 1 of 1, from 1580 to 1589: score 2.5, E = 8.1
*->saGaTadpvLtv<-*
s+G+ d +Ltv
gi|8364594 1580 SSGN--DVTLTV 1589
Linker_histone: domain 1 of 2, from 1602 to 1615: score 1.4, E = 17
CS . ..TTTTEEEEST
*->s.GtGASGSFKLak<-*
s+++G SG FK ++
gi|8364594 1602 SgASGTSGAFKIGD 1615
DUF2158: domain 1 of 2, from 1611 to 1618: score 4.1, E = 2.8
*->FsvGDvVk<-*
F++GDvV+
gi|8364594 1611 FKIGDVVT 1618
Xin: domain 3 of 3, from 1614 to 1621: score 1.4, E = 47
*->GDVkttrw<-*
GDV tt+w
gi|8364594 1614 GDVVTTTW 1621
He_PIG: domain 2 of 4, from 1664 to 1686: score 6.1, E = 0.61
*->tPtptvqpG.sytftvtatdgsg<-*
t+t +v+ G++ ++ +tatd++g
gi|8364594 1664 TITAGVVDGtNLNVSITATDSGG 1686
ETX_MTX2: domain 1 of 1, from 1669 to 1693: score 0.7, E = 6.7
CS EEEEEEEEEEEEETTT-EEEEEEE-
*->lvaGvnftvkvtetplsnvsgesie<-*
+v+G+n++v +t t++ +vs+++ +
gi|8364594 1669 VVDGTNLNVSITATDSGGVSKTTAD 1693
Pectate_lyase: domain 1 of 1, from 1684 to 1709: score -0.1, E = 8.7
CS XXXXXXXXX....XXX--EEESS-EEE-TT
*->assgvtptvPsteaaaaatvvhdtIeVkaG<-*
s+gv++t++ +++atv + +++V aG
gi|8364594 1684 -SGGVSKTTA---DSTNATVDNIAPTVTAG 1709
DUF2158: domain 2 of 2, from 1723 to 1730: score 2.9, E = 5.8
*->FsvGDvVk<-*
+++GD+V+
gi|8364594 1723 YKIGDIVT 1730
SseC: domain 1 of 1, from 1741 to 1767: score -1.0, E = 7.5
*->mNsDitsersGlpyHHLsnvsvaasGtl<-*
+NsD+ s++s + + + svaas ++
gi|8364594 1741 SNSDTISGVS-VDFSAFGGSSVAASNSS 1767
He_PIG: domain 3 of 4, from 1776 to 1797: score 5.3, E = 1
*->ritGtPtptvqpGsytftvtatdgsg<-*
+++G +++t + ++ vtatd +g
gi|8364594 1776 ILSGAVDST----NLNVLVTATDNAG 1797
Fasciclin: domain 1 of 1, from 1785 to 1810: score 0.5, E = 9.6
CS CCHHHHHHHHTTCHHHHHHTSSSS.EEEE
*->gfstfvallkaagLvdtLneasgpGpfTv<-*
+++ +v++ + ag ++t sg+ ++Tv
gi|8364594 1785 NLNVLVTATDNAGNAKTT---SGSNNVTV 1810
Pollen_allerg_1: domain 1 of 1, from 1801 to 1815: score 1.3, E = 9.3
CS EETTS-.EEEEEEEE-
*->TsesdgrtlvaknViP<-*
T+ s+ ++ +n++P
gi|8364594 1801 TT-SGSNNVTVDNIAP 1815
Semialdhyde_dh: domain 1 of 1, from 1821 to 1833: score 0.7, E = 9
CS EEEEETTTSHHHH
*->kVaIvGAtGyvGq<-*
k+ I GAtG G+
gi|8364594 1821 KISIAGATGTSGA 1833
A2M_N_2: domain 1 of 1, from 1822 to 1852: score 1.5, E = 7.7
*->Lkl...sldkkeykvGetakvtvtgspfpagk<-*
+ + + + ++yk+G+t+++t + +++ g+
gi|8364594 1822 ISIagaTGTSGAYKIGDTVTATWN-DTAATGD 1852
Linker_histone: domain 2 of 2, from 1825 to 1838: score 1.5, E = 16
CS . ..TTTTEEEEST
*->s.GtGASGSFKLak<-*
+++tG SG +K ++
gi|8364594 1825 AgATGTSGAYKIGD 1838
DUF481: domain 1 of 1, from 1840 to 1867: score 2.8, E = 6.3
*->ynvrYnsdvpdgkkkTDTeTsvtLvYsF<-*
+++++n+ +++g ++ DT ++v++ ++
gi|8364594 1840 VTATWNDTAATGDNNSDTISAVSVNFTA 1867
He_PIG: domain 4 of 4, from 1889 to 1910: score 1.1, E = 16
*->ritGtPtptvqpGsytftvtatdgsg<-*
+++G ++++ + ++ vtatd +g
gi|8364594 1889 LVAGAIDSS----NLNVSVTATDNAG 1910
HYR: domain 1 of 2, from 1904 to 1913: score 0.9, E = 12
*->tatDnaGNeA<-*
tatDnaGN+A
gi|8364594 1904 TATDNAGNTA 1913
DUF1889: domain 1 of 1, from 1923 to 1943: score 1.4, E = 3.5
*->mDvsAPtPssmnEstAKGiFK<-*
+D APt ss+ stA G +K
gi|8364594 1923 VDTQAPTVSSVTSSTANGSYK 1943
HYR: domain 2 of 2, from 1923 to 1936: score 1.7, E = 6.9
*->vDttPPtvenCPnn<-*
vDt+ Ptv +++++
gi|8364594 1923 VDTQAPTVSSVTSS 1936
Fil_haemagg: domain 6 of 6, from 1959 to 2015: score 1.2, E = 13
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEE E-S-EEESSE...
*->vaaGaltlnaaalggldlnnggtlsagggltlt.aagllnnggtlia
v++G+ +l+ +g++++n s +gg tl+ a + +++ +
gi|8364594 1959 VVSGTPQLQLE--TGITDRNVDYASGSGGSTLNfAYTVQSGDASAD- 2002
CS ................EEEEESS-EEEEE
ggdlllaagalrnggdltltaaGdLdnsg<-*
l t +G+L ++g
gi|8364594 2003 ----------------LDYTGTGALGLNG 2015
DUF1857: domain 1 of 1, from 1989 to 1995: score 0.8, E = 7.3
*->Nfehtvp<-*
Nf++tv+
gi|8364594 1989 NFAYTVQ 1995
LysM: domain 1 of 1, from 1992 to 1998: score 4.1, E = 3.3
CS EE--TT-
*->YtVkkGD<-*
YtV++GD
gi|8364594 1992 YTVQSGD 1998
BiPBP_C: domain 1 of 2, from 2017 to 2030: score 5.4, E = 0.57
*->tVvDadGrsdrvVrf<-*
t+vD++G++++ +
gi|8364594 2017 TIVDDAGNAATL-TL 2030
RTX_C: domain 1 of 1, from 2072 to 2109: score 1.6, E = 5.6
*->sFtssnGkamdsrnsllglvssnalnnvastnsiqLArAA<-*
+F++++ + + +++s ++ s++++ ++ +si+L+++
gi|8364594 2072 TFSTDEVGTLSMGGSCGTSSSTTISS--TGNHSITLTQTD 2109
Triadin: domain 1 of 1, from 2093 to 2110: score -0.7, E = 9.2
*->tEitAEGnAsitttviDs<-*
t i Gn sit t D+
gi|8364594 2093 TTISSTGNHSITLTQTDN 2110
IgG_binding_B: domain 1 of 1, from 2111 to 2130: score 2.8, E = 4.3
*->ngVdGewlydtatktftvte<-*
++ G+ +y+++t t t++
gi|8364594 2111 SSALGDGTYSDCTVTVTDAV 2130
BiPBP_C: domain 2 of 2, from 2123 to 2139: score 2.4, E = 4.4
*->tLtVvDadGrsdrvVrf<-*
t+tV+Da G++ + +++
gi|8364594 2123 TVTVTDAVGNASTALAI 2139
PKD: domain 1 of 1, from 2123 to 2141: score 4.2, E = 0.92
CS EEEEEETTCEEEEEEEEEEE
*->tLtvsngvgsasattttvtV<-*
t+tv+++vg+as+ + +t
gi|8364594 2123 TVTVTDAVGNASTA-LAITA 2141
CheC: domain 1 of 1, from 2131 to 2153: score 3.4, E = 8
CS HHHHHHHHCTT.--EEE---EEEE
*->GsaataLsellgfkidispPavvi<-*
G+a+taL+ f++d + P+ ++
gi|8364594 2131 GNASTALAITA-FTVDTTAPSGHS 2153
//