hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            83648179.fa
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Query sequence: gi|83648179|ref|YP_436614.1|
Accession:      [none]
Description:    hypothetical protein HCH_05527 [Hahella chejuensis KCTC 2396]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
DHH             DHH family                                0.6        7.8   1
Lipoprotein_7   Adhesin lipoprotein                      -2.4        9.4   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
DHH               1/1      56    70 ..     1    17 [.     0.6      7.8
Lipoprotein_7     1/1      96   116 ..     1    21 [.    -2.4      9.4

Alignments of top-scoring domains:
DHH: domain 1 of 1, from 56 to 70: score 0.6, E = 7.8
                CS    HHHTT-EEEEE--S..S
                   *->aikegekIlIvgHynPD<-*
                      a+ e+ +I IvgH   D
  gi|8364817    56    ALTENSRIQIVGHG--D    70

Lipoprotein_7: domain 1 of 1, from 96 to 116: score -2.4, E = 9.4
                   *->mKKsKkiFitLCGiAatAiLP<-*
                      +K+ Kki +t+C  A  A  P
  gi|8364817    96    LKQIKKISLTVCYAAGNATQP    116

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