hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /usr1/pfam-23.0/Pfam_fs
Sequence file:            90022875.fa
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Query sequence: gi|90022875|ref|YP_528702.1|
Accession:      [none]
Description:    hypothetical protein Sde_3233 [Saccharophagus degradans 2-40]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
He_PIG          Putative Ig domain                     1028.2          0  30
PA14            PA14 domain                             103.5    3.8e-29   1
PKD             PKD domain                               51.2    3.5e-15  27
Big_2           Bacterial Ig-like domain (group 2)       29.8    5.7e-08  22
DAG1            Dystroglycan (Dystrophin-associated g    19.8    1.1e-05   6
Y_Y_Y           Y_Y_Y domain                             21.0    1.6e-05   4
Flp_Fap         Flp/Fap pilin component                  20.4    0.00017  12
Aegerolysin     Aegerolysin                              10.0      0.027  11
Urm1            Urm1 (Ubiquitin related modifier)         2.7       0.12   1
GatB_Yqey       GatB domain                               8.0       0.13   1
Arch_flagellin  Archaebacterial flagellin                 6.3       0.14   1
Cadherin        Cadherin domain                           7.5       0.19   5
DUF2585         Protein of unknown function (DUF2585)     3.1       0.49   1
FAP             Fibronectin-attachment protein (FAP)      3.1       0.72   1
CARDB           CARDB                                     5.6       0.74   3
NHL             NHL repeat                                7.5       0.78   1
Fuc4NAc_transf  4-alpha-L-fucosyltransferase (Fuc4NAc     2.6       0.93   1
Mpt_N           Methylene-tetrahydromethanopterin deh     7.7       0.97   6
DUF1929         Domain of unknown function (DUF1929)      3.1        1.1   1
Sec3            Exocyst complex component Sec3            1.4        1.4   1
DUF566          Family of unknown function (DUF566)       2.7        1.4   1
Glyco_hydro_35  Glycosyl hydrolases family 35             2.2        1.4   1
Sarcoglycan_2   Sarcoglycan alpha/epsilon                 1.9        1.5   6
MIF             Macrophage migration inhibitory facto     3.3        1.5   1
Pro_Al_protease Alpha-lytic protease prodomain            4.9        1.6   1
GTP_cyclohydroI GTP cyclohydrolase I                      3.0        1.9   1
Wzz             Chain length determinant protein          3.2        1.9   1
F5_F8_type_C    F5/8 type C domain                        3.2          2   1
Erg28           Erg28 like protein                        3.6        2.1   2
NPV_P10         Nucleopolyhedrovirus P10 protein          3.8        2.5   1
Alliinase_C     Allinase                                  1.6        2.8   1
Gly_transf_sug  Glycosyltransferase sugar-binding reg     2.9        2.8   2
DUF2590         Protein of unknown function (DUF2590)     2.0        2.9   2
ExbD            Biopolymer transport protein ExbD/Tol     2.6          3   1
PadR            Transcriptional regulator PadR-like f     2.9        3.1   1
Radial_spoke    Radial spokehead-like protein             0.4        3.4   1
V-ATPase_H      V-ATPase subunit H                        0.5        3.8   1
PPC             Bacterial pre-peptidase C-terminal do     2.9          4   1
FG-GAP          FG-GAP repeat                             3.8          4   1
SoxZ            Sulphur oxidation protein SoxZ            2.2        4.1   1
DCP1            Dcp1-like decapping family                2.3        4.5   1
DUF2604         Protein of Unknown function (DUF2604)     1.8        4.6   1
EFP             Elongation factor P (EF-P) OB domain      3.1        4.8   1
Rib             Rib/alpha-like repeat                     3.3          5   1
Crinivirus_P26  Crinivirus P26 protein                   -0.4        5.1   1
DnaJ_C          DnaJ C terminal region                    2.3        5.2   1
FliD_C          Flagellar hook-associated protein 2 C     1.6        5.2   1
Phospholip_A2_3 Prokaryotic phospholipase A2              1.1        5.3   1
TAF             TATA box binding protein associated f     2.4        5.3   1
ICE2            ICE2                                     -0.3        5.7   1
ClpB_D2-small   C-terminal, D2-small domain, of ClpB      1.4        5.8   1
Phage_X         Phage X family                            1.8        5.9   2
DUF1975         Domain of unknown function (DUF1975)      1.3          6   1
DPPIV_N         Dipeptidyl peptidase IV (DPP IV) N-te    -0.1          6   1
EMG1            EMG1/NEP1 methyltransferase               0.3          6   1
5_nucleotid_C   5'-nucleotidase, C-terminal domain        1.0        6.1   1
DisA_N          DisA bacterial checkpoint controller      1.9        6.2   1
DUF159          Uncharacterised ACR, COG2135             -0.6        6.4   1
PSI_PsaF        Photosystem I reaction centre subunit     0.5          7   1
DUF62           Protein of unknown function DUF62         0.1          7   1
Asp_decarbox    Aspartate decarboxylase                   2.2        7.2   1
Peptidase_C26   Peptidase C26                            -2.9        7.5   1
DUF1533         Protein of unknown function (DUF1533)     2.4        7.8   1
SWIRM           SWIRM domain                              1.9        7.9   1
Lipoprotein_10  Putative mycoplasma lipoprotein, C-te     1.2          8   1
Ribosomal_S5    Ribosomal protein S5, N-terminal doma     2.1        8.6   1
4_1_CTD         4.1 protein C-terminal domain (CTD)       0.8        8.9   1
4HBT            Thioesterase superfamily                  2.2        8.9   1
RepA_C          Plasmid encoded RepA protein              0.0        9.1   1
DUF1869         Domain of unknown function (DUF1869)     -0.8        9.2   1
HYR             HYR domain                                1.3        9.2   2
DUF469          Protein with unknown function (DUF469    -0.5        9.2   1
Sre             C. elegans Sre G protein-coupled chem    -0.2        9.7   1
DUF2436         Domain of unknown function (DUF2436)      0.5        9.8   1
PilP            Pilus assembly protein, PilP              0.6        9.9   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
DUF2585           1/1     178   186 ..   157   165 .]     3.1     0.49
Fuc4NAc_transf    1/1     180   191 ..   348   363 .]     2.6     0.93
Sec3              1/1     189   216 ..     1    31 [.     1.4      1.4
DCP1              1/1     202   233 ..     1    35 [.     2.3      4.5
DnaJ_C            1/1     203   214 ..   112   123 .]     2.3      5.2
PadR              1/1     203   213 ..    79    89 .]     2.9      3.1
V-ATPase_H        1/1     208   226 ..   408   431 ..     0.5      3.8
DUF469            1/1     264   269 ..   100   105 .]    -0.5      9.2
5_nucleotid_C     1/1     268   282 ..   181   195 .]     1.0      6.1
HYR               1/2     287   304 ..    68    86 .]     0.6       15
Gly_transf_sug    1/2     300   336 ..     1    46 [.     2.4      3.9
PPC               1/1     312   372 ..     8    85 .]     2.9        4
Sre               1/1     323   329 ..   378   384 .]    -0.2      9.7
EFP               1/1     326   333 ..    51    58 .]     3.1      4.8
MIF               1/1     327   334 ..   108   115 .]     3.3      1.5
DUF1533           1/1     342   355 ..    57    70 .]     2.4      7.8
Crinivirus_P26    1/1     348   365 ..   210   227 .]    -0.4      5.1
Phage_X           1/2     423   439 ..    86   102 .]     0.8       12
Urm1              1/1     457   465 ..     1     9 [.     2.7     0.12
He_PIG            1/30    470   503 ..    27    61 .]     8.2     0.16
FG-GAP            1/1     511   528 ..    17    36 .]     3.8        4
DUF2604           1/1     512   527 ..     1    14 [.     1.8      4.6
Pro_Al_protease   1/1     522   537 ..    26    41 ..     4.9      1.6
F5_F8_type_C      1/1     709   751 ..   105   162 .]     3.2        2
DUF2436           1/1     714   721 ..   158   165 .]     0.5      9.8
HYR               2/2     765   783 ..    67    86 .]     0.7       14
Asp_decarbox      1/1     780   792 ..   104   116 .]     2.2      7.2
DUF1929           1/1     789   821 ..     1    34 [.     3.1      1.1
DAG1              1/6     790   867 ..    21   106 ..     8.5    0.014
He_PIG            2/30    825   872 ..     1    61 []    42.4  3.1e-11
CARDB             1/3     846   871 ..    70    97 ..     0.9       14
Cadherin          1/5     850   866 ..    91   107 .]     0.6       18
Y_Y_Y             1/4     860   885 ..    44    69 .]     5.3     0.76
He_PIG            3/30    927   974 ..     1    61 []    37.9  5.6e-10
ICE2              1/1     928   935 ..   547   554 .]    -0.3      5.7
Glyco_hydro_35    1/1     935   949 ..    94   108 ..     2.2      1.4
CARDB             2/3     948   970 ..    70    94 ..     1.8        8
Cadherin          2/5     952   968 ..    91   107 .]     3.2      3.3
Aegerolysin       1/11    955   970 ..   122   140 .]     2.3      3.9
Arch_flagellin    1/1     958   990 ..   175   211 ..     6.3     0.14
PKD               1/27    960   986 ..    67    92 .]     0.9      9.5
DUF2590           1/2     961   969 ..    95   105 .]     0.7      8.5
Y_Y_Y             2/4     962   987 ..    44    69 .]     2.7      4.4
PA14              1/1    1013  1154 ..     1   178 []   103.5  3.8e-29
NHL               1/1    1063  1081 ..    11    30 .]     7.5     0.78
DisA_N            1/1    1086  1095 ..   125   134 .]     1.9      6.2
DUF62             1/1    1172  1185 ..   266   279 .]     0.1        7
Rib               1/1    1179  1189 ..    60    70 .]     3.3        5
Radial_spoke      1/1    1218  1229 ..     1    12 [.     0.4      3.4
TAF               1/1    1218  1227 ..    56    66 .]     2.4      5.3
ExbD              1/1    1230  1288 ..    30    91 ..     2.6        3
ClpB_D2-small     1/1    1255  1279 ..    71    95 .]     1.4      5.8
DUF159            1/1    1269  1277 ..   273   281 .]    -0.6      6.4
4_1_CTD           1/1    1311  1336 ..    18    44 ..     0.8      8.9
He_PIG            4/30   1313  1360 ..     1    61 []    34.3  6.1e-09
Erg28             1/2    1321  1337 ..     1    17 [.     3.5      2.3
DAG1              2/6    1324  1372 ..    73   127 ..     0.8      1.8
Cadherin          3/5    1338  1354 ..    91   107 .]     0.8       17
DUF2590           2/2    1347  1355 ..    95   105 .]     1.3        5
PKD               2/27   1353  1372 ..    74    92 .]     4.7     0.67
GatB_Yqey         1/1    1366  1385 ..     1    24 [.     8.0     0.13
He_PIG            5/30   1414  1461 ..     1    61 []    45.9    3e-12
Gly_transf_sug    2/2    1424  1443 ..    70    94 .]     0.5       15
DUF1975           1/1    1429  1440 ..   206   217 .]     1.3        6
4HBT              1/1    1447  1463 ..    61    77 .]     2.2      8.9
Big_2             1/22   1451  1468 ..    72    90 .]     2.3      5.5
PKD               3/27   1451  1472 ..    71    92 .]     2.7      2.7
He_PIG            6/30   1514  1561 ..     1    61 []    37.7  6.6e-10
DAG1              3/6    1528  1573 ..   525   569 ..     4.0     0.23
PKD               4/27   1551  1573 ..    71    92 .]     2.1      4.1
Wzz               1/1    1563  1593 ..   212   242 .]     3.2      1.9
PKD               5/27   1605  1672 ..    40    92 .]     1.2      8.1
He_PIG            7/30   1615  1662 ..     1    61 []    19.4   0.0001
RepA_C            1/1    1623  1634 ..   133   146 ..     0.0      9.1
CARDB             3/3    1636  1661 ..    70    97 ..     2.8      4.3
Big_2             2/22   1648  1668 ..    70    90 .]     1.4       10
Phage_X           2/2    1683  1699 ..    86   102 .]     1.0       10
He_PIG            8/30   1717  1764 ..     1    61 []    35.3  3.2e-09
DAG1              4/6    1731  1778 ..   525   571 ..     2.1     0.74
Aegerolysin       2/11   1745  1760 ..   122   140 .]     1.1      8.7
Flp_Fap           1/12   1750  1780 ..    17    50 .]     2.4       13
PKD               6/27   1750  1776 ..    67    92 .]     1.5      6.2
He_PIG            9/30   1819  1866 ..     1    61 []    34.6  4.8e-09
Flp_Fap           2/12   1852  1882 ..    17    50 .]     0.9       31
Big_2             3/22   1856  1874 ..    72    90 .]     1.5      9.5
PKD               7/27   1861  1878 ..    76    92 .]     0.6       12
He_PIG           10/30   1921  1968 ..     1    61 []    34.6    5e-09
Flp_Fap           3/12   1954  1984 ..    17    50 .]     0.4       42
PKD               8/27   1954  1980 ..    67    92 .]     0.9      9.8
Big_2             4/22   1958  1976 ..    72    90 .]     1.4      9.9
Mpt_N             1/6    1975  1981 ..     1     7 [.     1.3       31
Sarcoglycan_2     1/6    2016  2065 ..    57   112 ..     0.2      4.3
He_PIG           11/30   2023  2070 ..     1    61 []    35.0  3.8e-09
Aegerolysin       3/11   2050  2066 ..   117   140 .]     0.4       14
Flp_Fap           4/12   2056  2086 ..    17    50 .]     3.6      5.9
PKD               9/27   2056  2082 ..    67    92 .]     0.9      9.8
Big_2             5/22   2060  2078 ..    72    90 .]     1.4      9.9
DPPIV_N           1/1    2095  2120 ..   384   416 ..    -0.1        6
He_PIG           12/30   2125  2172 ..     1    61 []    36.5  1.4e-09
PKD              10/27   2158  2184 ..    67    92 .]     2.3      3.5
Big_2             6/22   2162  2180 ..    72    90 .]     1.4      9.9
Sarcoglycan_2     2/6    2220  2269 ..    57   112 ..     0.2      4.3
He_PIG           13/30   2227  2274 ..     1    61 []    35.0  3.8e-09
Aegerolysin       4/11   2254  2270 ..   117   140 .]     0.4       14
Flp_Fap           5/12   2260  2290 ..    17    50 .]     3.6      5.9
PKD              11/27   2260  2286 ..    67    92 .]     0.9      9.8
Big_2             7/22   2264  2282 ..    72    90 .]     1.4      9.9
Sarcoglycan_2     3/6    2322  2371 ..    57   112 ..     0.3        4
He_PIG           14/30   2329  2376 ..     1    61 []    35.0  3.8e-09
Aegerolysin       5/11   2356  2372 ..   117   140 .]     0.4       14
Flp_Fap           6/12   2362  2392 ..    17    50 .]     3.6      5.9
PKD              12/27   2362  2388 ..    67    92 .]     0.9      9.8
Big_2             8/22   2366  2384 ..    72    90 .]     1.4      9.9
He_PIG           15/30   2431  2478 ..     1    61 []    36.3  1.6e-09
Flp_Fap           7/12   2464  2494 ..    17    50 .]     0.1       53
PKD              13/27   2464  2490 ..    67    92 .]     0.9      9.8
Big_2             9/22   2468  2486 ..    72    90 .]     1.4      9.9
Mpt_N             2/6    2485  2491 ..     1     7 [.     1.3       31
He_PIG           16/30   2533  2580 ..     1    61 []    36.5  1.4e-09
PKD              14/27   2566  2592 ..    67    92 .]     2.3      3.5
Big_2            10/22   2570  2588 ..    72    90 .]     1.4      9.9
Sarcoglycan_2     4/6    2628  2677 ..    57   112 ..     0.5      3.6
He_PIG           17/30   2635  2682 ..     1    61 []    36.0    2e-09
Aegerolysin       6/11   2662  2678 ..   117   140 .]     1.8      5.6
PKD              15/27   2668  2694 ..    67    92 .]     3.4      1.6
Big_2            11/22   2672  2690 ..    72    90 .]     1.4      9.9
Mpt_N             3/6    2689  2695 ..     1     7 [.     1.3       31
He_PIG           18/30   2737  2784 ..     1    61 []    35.2  3.3e-09
Aegerolysin       7/11   2764  2780 ..   117   140 .]     0.4       14
PKD              16/27   2770  2796 ..    67    92 .]     1.4      6.7
Big_2            12/22   2774  2792 ..    72    90 .]     1.8      7.8
He_PIG           19/30   2839  2886 ..     1    61 []    34.4  5.7e-09
PKD              17/27   2872  2898 ..    67    92 .]     2.3      3.5
Big_2            13/22   2876  2894 ..    72    90 .]     1.4      9.9
He_PIG           20/30   2941  2988 ..     1    61 []    36.5  1.4e-09
PKD              18/27   2974  3000 ..    67    92 .]     2.3      3.5
Big_2            14/22   2978  2996 ..    72    90 .]     1.4      9.9
Sarcoglycan_2     5/6    3036  3085 ..    57   112 ..     0.5      3.6
He_PIG           21/30   3043  3090 ..     1    61 []    36.0    2e-09
Aegerolysin       8/11   3070  3086 ..   117   140 .]     1.8      5.6
Flp_Fap           8/12   3076  3106 ..    17    50 .]     0.3       47
PKD              19/27   3076  3102 ..    67    92 .]     4.4     0.84
Big_2            15/22   3080  3098 ..    72    90 .]     1.4      9.9
He_PIG           22/30   3145  3192 ..     1    61 []    35.9  2.2e-09
Erg28             2/2    3153  3170 ..     1    18 [.     0.2       19
Flp_Fap           9/12   3178  3208 ..    17    50 .]     0.4       42
PKD              20/27   3178  3204 ..    67    92 .]     0.9      9.8
Big_2            16/22   3182  3200 ..    72    90 .]     1.4      9.9
Mpt_N             4/6    3199  3205 ..     1     7 [.     1.3       31
Sarcoglycan_2     6/6    3244  3289 ..    62   112 ..     0.0      4.9
He_PIG           23/30   3247  3294 ..     1    61 []    36.0    2e-09
Aegerolysin       9/11   3274  3290 ..   117   140 .]     0.4       14
PKD              21/27   3280  3306 ..    67    92 .]     2.8      2.5
Big_2            17/22   3284  3302 ..    72    90 .]     0.7       16
He_PIG           24/30   3349  3396 ..     1    61 []    31.5  3.6e-08
Aegerolysin      10/11   3379  3392 ..   124   140 .]     0.5       13
PKD              22/27   3382  3408 ..    67    92 .]     1.5      6.2
Mpt_N             5/6    3403  3409 ..     1     7 [.     1.3       31
He_PIG           25/30   3451  3498 ..     1    61 []    37.3  8.4e-10
Cadherin          4/5    3476  3492 ..    91   107 .]     2.5      5.2
Flp_Fap          10/12   3484  3514 ..    17    50 .]     0.4       42
Big_2            18/22   3488  3506 ..    72    90 .]     1.4      9.9
Mpt_N             6/6    3505  3511 ..     1     7 [.     1.3       31
He_PIG           26/30   3553  3600 ..     1    61 []    35.5  2.7e-09
PKD              23/27   3586  3612 ..    67    92 .]     2.8      2.5
Big_2            19/22   3590  3608 ..    72    90 .]     0.7       16
He_PIG           27/30   3655  3702 ..     1    61 []    36.9  1.1e-09
Aegerolysin      11/11   3682  3698 ..   117   140 .]     0.4       14
Flp_Fap          11/12   3688  3718 ..    17    50 .]     1.0       29
PKD              24/27   3688  3714 ..    67    92 .]     2.0      4.6
Big_2            20/22   3692  3710 ..    72    90 .]     1.4      9.9
He_PIG           28/30   3757  3804 ..     1    61 []    36.2  1.7e-09
DAG1              5/6    3771  3818 ..   525   571 ..     2.3     0.66
Flp_Fap          12/12   3790  3820 ..    17    50 .]     3.7      5.6
PKD              25/27   3790  3816 ..    67    92 .]     1.6        6
Big_2            21/22   3794  3812 ..    72    90 .]     0.9       14
He_PIG           29/30   3859  3906 ..     1    61 []    36.2  1.7e-09
PKD              26/27   3892  3918 ..    67    92 .]     1.5      6.1
Peptidase_C26     1/1    3898  3910 ..   211   224 ..    -2.9      7.5
DAG1              6/6    3931  4001 ..    32   104 ..     2.1     0.77
Alliinase_C       1/1    3952  3962 ..     1    11 [.     1.6      2.8
He_PIG           30/30   3961  4008 ..     1    61 []    20.3  5.6e-05
Phospholip_A2_3   1/1    3963  3977 ..     1    15 [.     1.1      5.3
EMG1              1/1    3967  3986 ..   214   233 .]     0.3        6
PKD              27/27   3995  4017 ..    68    92 .]     1.3      7.4
Y_Y_Y             3/4    3998  4021 ..    46    69 .]     2.6      4.8
DUF566            1/1    4022  4040 ..   358   376 .]     2.7      1.4
Lipoprotein_10    1/1    4108  4121 ..   131   144 .]     1.2        8
GTP_cyclohydroI   1/1    4134  4149 ..    90   105 .]     3.0      1.9
DUF1869           1/1    4156  4169 ..     1    15 [.    -0.8      9.2
Cadherin          5/5    4160  4184 ..     1    29 [.     0.4       21
FliD_C            1/1    4184  4208 ..    32    56 ..     1.6      5.2
Big_2            22/22   4195  4213 ..    71    90 .]     0.7       17
Y_Y_Y             4/4    4199  4220 ..    45    69 .]    10.4    0.022
SoxZ              1/1    4204  4219 ..    89   104 .]     2.2      4.1
PilP              1/1    4208  4220 ..   136   148 .]     0.6      9.9
NPV_P10           1/1    4219  4245 ..    62    89 .]     3.8      2.5
SWIRM             1/1    4281  4305 ..     1    25 [.     1.9      7.9
Ribosomal_S5      1/1    4354  4367 ..    54    67 .]     2.1      8.6
FAP               1/1    4362  4392 ..     1    31 [.     3.1     0.72
PSI_PsaF          1/1    4397  4420 ..     1    26 [.     0.5        7

Alignments of top-scoring domains:
DUF2585: domain 1 of 1, from 178 to 186: score 3.1, E = 0.49
                   *->EAIkeWQaG<-*
                      +AI +WQ++
  gi|9002287   178    DAITQWQQA    186

Fuc4NAc_transf: domain 1 of 1, from 180 to 191: score 2.6, E = 0.93
                   *->lkgWqqaLaiAagEva<-*
                      +++WqqaL    gE a
  gi|9002287   180    ITQWQQAL----GEDA    191

Sec3: domain 1 of 1, from 189 to 216: score 1.4, E = 1.4
                   *->kdaekLeadidreigdAeafaerLldELqaL<-*
                       da++L++++d +  dA      Ll++L +L
  gi|9002287   189    EDADILIYGCDIAATDAGR---ELLKQLAEL    216

DCP1: domain 1 of 1, from 202 to 233: score 2.3, E = 4.5
                   *->vkkarreiAAknLaaLkriDPyIeeIldvssfVAv<-*
                      +  a+re+  k La+L ++D+++++  d+++++++
  gi|9002287   202    ATDAGREL-LKQLAELTQADIAASD--DLTGHASL    233

DnaJ_C: domain 1 of 1, from 203 to 214: score 2.3, E = 5.2
                   *->seeQkeLLeela<-*
                      ++  +eLL++la
  gi|9002287   203    TDAGRELLKQLA    214

PadR: domain 1 of 1, from 203 to 213: score 2.9, E = 3.1
                   *->TdaGrreLaer<-*
                      TdaGr+ L+++
  gi|9002287   203    TDAGRELLKQL    213

V-ATPase_H: domain 1 of 1, from 208 to 226: score 0.5, E = 3.8
                CS    HHHHHHHHHHHHHHHTT---SHHH
                   *->eLLKiLikLLekKVRNGDVNAshD<-*
                      eLLK+L +L ++     D+ As+D
  gi|9002287   208    ELLKQLAELTQA-----DIAASDD    226

DUF469: domain 1 of 1, from 264 to 269: score -0.5, E = 9.2
                   *->LvDaWy<-*
                      LvD++y
  gi|9002287   264    LVDVNY    269

5_nucleotid_C: domain 1 of 1, from 268 to 282: score 1.0, E = 6.1
                   *->sYragGGdgfpmlke<-*
                      +Y+ +GG+ f+ + +
  gi|9002287   268    NYINTGGGDFTETVS    282

HYR: domain 1 of 2, from 287 to 304: score 0.6, E = 15
                   *->tatDnaGNeAdsCtFtVtV<-*
                      + +D ++N++ s+t tV+
  gi|9002287   287    VGQDFSYNSG-SGTYTVNE    304

Gly_transf_sug: domain 1 of 2, from 300 to 336: score 2.4, E = 3.9
                   *->ydvilvtpdleslfkdtpaypwfqeafssardPGrwpKyynaaasD<
                      y v +++++l ++  +++  +++ + ++      +w+    ++asD
  gi|9002287   300    YTVNEISLNLARYATAES-QTITVQLRD------AWN--GTVLASD  336

                   -*

  gi|9002287     -    -

PPC: domain 1 of 1, from 312 to 372: score 2.9, E = 4
                CS    EESTTCE EEEEEECTSSS...S...CCEEEEEEECCCSESSSSTTC
                   *->tvpaggt.lsisldggsslrslsgnGdadtlLywlldgdpslsayda
                      +++a+++++++ l + +         + +     +l +d+++s+ +
  gi|9002287   312    YATAESQtITVQLRDAW---------NGT-----VLASDTVASSEIS 344

                CS E-.....ECCTTEEEEEECC.-SEEEEEEEEE
                   ystTrdvdnggsdelisftapeaGtYyirVyg<-*
                    ++        s  ++++++++  tY++rV++
  gi|9002287   345 ADG----FEWHSFGFGDVSLTDGATYFVRVSS    372

Sre: domain 1 of 1, from 323 to 329: score -0.2, E = 9.7
                   *->QLndSWi<-*
                      QL+d+W+
  gi|9002287   323    QLRDAWN    329

EFP: domain 1 of 1, from 326 to 333: score 3.1, E = 4.8
                   *->DtwngevL<-*
                      D+wng+vL
  gi|9002287   326    DAWNGTVL    333

MIF: domain 1 of 1, from 327 to 334: score 3.3, E = 1.5
                CS    ETTEEGGG
                   *->GfnGstla<-*
                      ++nG++la
  gi|9002287   327    AWNGTVLA    334

DUF1533: domain 1 of 1, from 342 to 355: score 2.4, E = 7.8
                   *->kIkakGYeDaeiti<-*
                      +I+a+G+e+ ++ +
  gi|9002287   342    EISADGFEWHSFGF    355

Crinivirus_P26: domain 1 of 1, from 348 to 365: score -0.4, E = 5.1
                   *->FRWKGvGFGGLsLnDiKi<-*
                      F W   GFG +sL D
  gi|9002287   348    FEWHSFGFGDVSLTDGAT    365

Phage_X: domain 1 of 2, from 423 to 439: score 0.8, E = 12
                   *->kpaqiPdWYvepvlstn<-*
                      +++++Pd++   ++++n
  gi|9002287   423    VDNAVPDQAATEDVAFN    439

Urm1: domain 1 of 1, from 457 to 465: score 2.7, E = 0.12
                CS    EEEEEEESS
                   *->kitvEFlGG<-*
                      +i+vE++GG
  gi|9002287   457    RIRVELSGG    465

He_PIG: domain 1 of 30, from 470 to 503: score 8.2, E = 0.16
                   *->GLtLdsstGritGtPtptvqpGsytftvtatdgsg<-*
                      +L  + st  ++GtP ++   G+ +++v atd +g
  gi|9002287   470    WLQYNESTRQFSGTPRTA-DVGTMSIDVIATDNHG    503

FG-GAP: domain 1 of 1, from 511 to 528: score 3.8, E = 4
                CS    EEEE EETCCCSCC TSEEEEE
                   *->Dlvv.gaPgadggt.dgsvyll<-*
                      D+v++g+P     + d+s+ ++
  gi|9002287   511    DIVInGVP----TAvDDSANVW    528

DUF2604: domain 1 of 1, from 512 to 527: score 1.8, E = 4.6
                   *->VVVNGqPvdVE..ANv<-*
                      +V+NG P+ V ++ANv
  gi|9002287   512    IVINGVPTAVDdsANV    527

Pro_Al_protease: domain 1 of 1, from 522 to 537: score 4.9, E = 1.6
                CS    GCCEEEEEEECCCTEE
                   *->adfatsWyVDpttNrV<-*
                      +d+a++Wy+++ t+ V
  gi|9002287   522    DDSANVWYTESVTGNV    537

F5_F8_type_C: domain 1 of 1, from 709 to 751: score 3.2, E = 2
                CS    EEEEEE.....S.TTC--EEE SSS SEEEEEEEEEEEEEEEEEEEE
                   *->ttvkdgedylsdsggpkvFgn.dnd.pvknlfdppikARYvRivpts
                      t v++              g +d+++  +n+   + + RY+ +++t
  gi|9002287   709    TLVGT--------------GSgDSTdLSTNYEVVSGDFRYLVFTAT- 740

                CS ETTCSS-EEEEEE
                   wnggggiasraEl<-*
                   +  g + ++++El
  gi|9002287   741 T--GTDSYRVYEL    751

DUF2436: domain 1 of 1, from 714 to 721: score 0.5, E = 9.8
                   *->GsGDGTdl<-*
                      GsGD Tdl
  gi|9002287   714    GSGDSTDL    721

HYR: domain 2 of 2, from 765 to 783: score 0.7, E = 14
                   *->YtatDnaGNeAdsCtFtVtV<-*
                      Y+++D++G ++ ++ +tV+
  gi|9002287   765    YVVEDSNGDQD-TGLLTVAF    783

Asp_decarbox: domain 1 of 1, from 780 to 792: score 2.2, E = 7.2
                CS    EEEEE-TTS-EEE
                   *->kvVfvDedNrike<-*
                      +v fv+++Nr++
  gi|9002287   780    TVAFVNDNNRPTV    792

DUF1929: domain 1 of 1, from 789 to 821: score 3.1, E = 1.1
                CS    ---EEE.ES-SEEETT-E.EEEEESS--......
                   *->RPtItstvaPssikYGgsyftvtvsvpisvvakg<-*
                      RPt+ +  +P++++   ++f +t+++ ++++a+g
  gi|9002287   789    RPTVAN-AIPDQVAPDNEPFSFTFAANTFNDADG    821

DAG1: domain 1 of 6, from 790 to 867: score 8.5, E = 0.014
                CS    XXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXX
                   *->avvaavsqpsglpdssavvGraFrlhvptellassedqGiikisead
                      ++va       +pd  a    +F ++   +++ +++   ++  s+
  gi|9002287   790    PTVA-----NAIPDQVAPDNEPFSFTFAANTFNDADG-ETLTYSAEL 830

                CS XXX..X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                   KdgheLkapswLhwdadsrtLqGLPLdtDKGVhyIsVSr<-*
                   K+g  L  pswL +da+ rt  G P   D G  +I V +
  gi|9002287   831 KNGGAL--PSWLSFDANTRTFSGTPATSDVGTIEIRVTA    867

He_PIG: domain 2 of 30, from 825 to 872: score 42.4, E = 3.1e-11
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++             ++ gg+LPs+L++d+ t +++GtP+++
  gi|9002287   825    TYSA------------ELKNGGALPSWLSFDANTRTFSGTPATS-DV 858

                   Gsytftvtatdgsg<-*
                   G+ +++vta dg
  gi|9002287   859 GTIEIRVTADDGNW    872

CARDB: domain 1 of 3, from 846 to 871: score 0.9, E = 14
                   *->tvsfswtpersiteGnyttlkvvvDpeN<-*
                      t++fs tp+ ++ +G+ + ++v++D +N
  gi|9002287   846    TRTFSGTPA-TSDVGTIE-IRVTADDGN    871

Cadherin: domain 1 of 5, from 850 to 866: score 0.6, E = 18
                CS    ...S---EEEE--EEE-
                   *->gggpplsstatvtitVl<-*
                      +g+p+ s+++t+ i V+
  gi|9002287   850    SGTPATSDVGTIEIRVT    866

Y_Y_Y: domain 1 of 4, from 860 to 885: score 5.3, E = 0.76
                   *->tikvkakdkdgnwsyddiasltftvl<-*
                      ti+++++ +dgnw+ ++  ++++ v+
  gi|9002287   860    TIEIRVTADDGNWGTPAQDIFEIDVN    885

He_PIG: domain 3 of 30, from 927 to 974: score 37.9, E = 5.6e-10
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+             ++ggggLP++Lt+ + t +++GtP+++
  gi|9002287   927    TYTA------------ELSGGGGLPAWLTFTPGTRTFSGTPASG-DV 960

                   Gsytftvtatdgsg<-*
                   G+ t+ vta d+ g
  gi|9002287   961 GTITIEVTADDSNG    974

ICE2: domain 1 of 1, from 928 to 935: score -0.3, E = 5.7
                   *->YAvELigs<-*
                      Y++EL+g+
  gi|9002287   928    YTAELSGG    935

Glyco_hydro_35: domain 1 of 1, from 935 to 949: score 2.2, E = 1.4
                   *->fGGLPaWLltvpgir<-*
                      +GGLPaWL+ +pg+r
  gi|9002287   935    GGGLPAWLTFTPGTR    949

CARDB: domain 2 of 3, from 948 to 970: score 1.8, E = 8
                   *->tvsfswtpersiteGnyttlkvvvD<-*
                      t++fs tp+ s+ +G+ t ++v++D
  gi|9002287   948    TRTFSGTPA-SGDVGTIT-IEVTAD    970

Cadherin: domain 2 of 5, from 952 to 968: score 3.2, E = 3.3
                CS    ...S---EEEE--EEE-
                   *->gggpplsstatvtitVl<-*
                      +g+p+  +++t+ti+V+
  gi|9002287   952    SGTPASGDVGTITIEVT    968

Aegerolysin: domain 1 of 11, from 955 to 970: score 2.3, E = 3.9
                   *->sesGalGtVtvtvQtssrk<-*
                      ++sG+ Gt+t++v    +
  gi|9002287   955    PASGDVGTITIEV---TAD    970

Arch_flagellin: domain 1 of 1, from 958 to 990: score 6.3, E = 0.14
                   *->gdkvaItvtlnlpintdstf..vginpstkvrgeVvpen<-*
                      gd+++It      i+++++++++g ++++++ ++V p+n
  gi|9002287   958    GDVGTIT------IEVTADDsnGGTPATDTFDIVVAPPN    990

PKD: domain 1 of 27, from 960 to 986: score 0.9, E = 9.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt t+ +t+ +++g + at++  ++V
  gi|9002287   960    VGTITIEVTADDSNGGTPATDtFDIVV    986

DUF2590: domain 1 of 2, from 961 to 969: score 0.7, E = 8.5
                   *->GlqeisleVtl<-*
                      G  +i++eVt+
  gi|9002287   961    G--TITIEVTA    969

Y_Y_Y: domain 2 of 4, from 962 to 987: score 2.7, E = 4.4
                   *->tikvkakdkdgnwsyddiasltftvl<-*
                      ti+++++ +d+n + ++  +++++v+
  gi|9002287   962    TITIEVTADDSNGGTPATDTFDIVVA    987

PA14: domain 1 of 1, from 1013 to 1154: score 103.5, E = 3.8e-29
                CS    ---SE.EEEEESSTTS-SEEEEE.............EESSSB--B-G
                   *->gkpGlstgyyfengkfsgdpeltrlapgindwdfdyedtdpvntfys
                      +++G   g+yf+n+++ g+ +                ++d++++ y+
  gi|9002287  1013    QGNGI-IGSYFNNTTLTGPAVD--------------TNVDYTINYYW 1044

                CS GGGTTS  -GGGGC--EEEEEEEEEBSS-EEEEEEETTGGGEEEEETTEE
                   dsdkpg..fgeapdnfsvrwtGylkppesGtYtFaiasddgarlwvDGkl
                      + ++ +g+++dnfsvrw+G l++ e+G++ F+ +sddg r+++DG l
  gi|9002287  1045 TGAPDNgvTGINADNFSVRWEGQLLVTETGNHQFQTMSDDGIRVYIDGDL 1094

                CS EEESS.......................XX---EEE-CT-EEEEEEEEE-
                   vidnwgagkheeestiipigksfakarpstsstlyllaGgtYpirieYfe
                   vidnw  + h              +++ +tss + l+aG+tY++ ++++e
  gi|9002287  1095 VIDNW--ASHP-------------SGTIDTSSNIALVAGRTYDVVVDFYE 1129

                CS S---SSCB--.....BEEEE-TTS-EEE--TTT
                   aggggsllpekihgtslsWtspdgakeaidedv<-*
                    +  +          +l W +p  ++  i++++
  gi|9002287  1130 NNVEAEA--------KLFWQTPSSGGFNIIAAG    1154

NHL: domain 1 of 1, from 1063 to 1081: score 7.5, E = 0.78
                CS    TTTS-EEEEE-GGGTEEEEE
                   *->psdGrvyVaDgsgNhrvqvf<-*
                      ++ G+++V++ +gNh+ q
  gi|9002287  1063    RWEGQLLVTE-TGNHQFQTM    1081

DisA_N: domain 1 of 1, from 1086 to 1095: score 1.9, E = 6.2
                   *->iSvakdGklv<-*
                      i+v++dG+lv
  gi|9002287  1086    IRVYIDGDLV    1095

DUF62: domain 1 of 1, from 1172 to 1185: score 0.1, E = 7
                CS    HT--TT-.EEEEEE
                   *->lnvKeGddeievil<-*
                      + v+ G+de+ev +
  gi|9002287  1172    FDVDAGADELEVTI    1185

Rib: domain 1 of 1, from 1179 to 1189: score 3.3, E = 5
                   *->DeVpVtVtVtd<-*
                      De++Vt+ V++
  gi|9002287  1179    DELEVTISVNS    1189

Radial_spoke: domain 1 of 1, from 1218 to 1229: score 0.4, E = 3.4
                   *->ieeavqnAkAYL<-*
                      ++++++ A+A+L
  gi|9002287  1218    TADDINSALAFL    1229

TAF: domain 1 of 1, from 1218 to 1227: score 2.4, E = 5.3
                CS    -HHHHHHH.H-
                   *->TvdDidsALLR<-*
                      T+dDi+sA L
  gi|9002287  1218    TADDINSA-LA    1227

ExbD: domain 1 of 1, from 1230 to 1288: score 2.6, E = 3
                   *->tfikesvle.kveLPkasssek......lvaekevliisvde.gaad
                      +f+++++ +++v+L  +++++ +++ ++++++++v++i+v++++++d
  gi|9002287  1230    SFTPTANFSgDVSLTFTTNDQGnnglggPLSDTDVVTITVNStDNDD 1276

                   klgsvlgkiyldgepgvevdlee<-*
                            +ld+   v  d+++
  gi|9002287  1277 --------PQLDNAL-V--DQNA    1288

ClpB_D2-small: domain 1 of 1, from 1255 to 1279: score 1.4, E = 5.8
                CS    HHSSS-TT-EEEEEE-  .....SSSE
                   *->LsGelkeGdtvrvdvd..dgeggelvf<-*
                      L G l++ d+v+++v+++d+  ++ ++
  gi|9002287  1255    LGGPLSDTDVVTITVNstDN--DDPQL    1279

DUF159: domain 1 of 1, from 1269 to 1277: score -0.6, E = 6.4
                CS    ........E
                   *->VNnprNdgp<-*
                      VN++ Nd+p
  gi|9002287  1269    VNSTDNDDP    1277

4_1_CTD: domain 1 of 1, from 1311 to 1336: score 0.8, E = 8.9
                   *->TiTYEsaqvDdgadldpGvLltAqtiT<-*
                      TiTY saq+ +g  l +   +tA t T
  gi|9002287  1311    TITY-SAQISGGGALPSWLTFTAGTRT    1336

He_PIG: domain 4 of 30, from 1313 to 1360: score 34.3, E = 6.1e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            + +ggg+LPs+Lt+ + t +++GtPt
  gi|9002287  1313    TYSA------------QISGGGALPSWLTFTAGTRTFSGTPTND-DV 1346

                   Gsytftvtatdgsg<-*
                   G+ ++ vta dg g
  gi|9002287  1347 GTISIEVTADDGNG    1360

Erg28: domain 1 of 2, from 1321 to 1337: score 3.5, E = 2.3
                   *->mglLpyWLlfVSvvslf<-*
                       g+Lp+WL f + +++f
  gi|9002287  1321    GGALPSWLTFTAGTRTF    1337

DAG1: domain 2 of 6, from 1324 to 1372: score 0.8, E = 1.8
                CS    X..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                   *->LkapswLhwdadsrtLqGLPLdtDKGVhyIsVSrlrlrlngsdvpqt
                      L  pswL + a  rt  G P ++D G   I V +      g     +
  gi|9002287  1324    L--PSWLTFTAGTRTFSGTPTNDDVGTISIEVTA----DDGNGGTTA 1364

                CS XXXXXXXX
                   sdvfsvEv<-*
                   +dvf + v
  gi|9002287  1365 TDVFDITV    1372

Cadherin: domain 3 of 5, from 1338 to 1354: score 0.8, E = 17
                CS    ...S---EEEE--EEE-
                   *->gggpplsstatvtitVl<-*
                      +g+p  ++++t+ i+V+
  gi|9002287  1338    SGTPTNDDVGTISIEVT    1354

DUF2590: domain 2 of 2, from 1347 to 1355: score 1.3, E = 5
                   *->GlqeisleVtl<-*
                      G  +is+eVt+
  gi|9002287  1347    G--TISIEVTA    1355

PKD: domain 2 of 27, from 1353 to 1372: score 4.7, E = 0.67
                CS    EEEEETTCEEEEEE EEEEE
                   *->Ltvsngvgsasatt.ttvtV<-*
                      +t+ +g+g ++at+   +tV
  gi|9002287  1353    VTADDGNGGTTATDvFDITV    1372

GatB_Yqey: domain 1 of 1, from 1366 to 1385: score 8.0, E = 0.13
                   *->dyFEeavkagaddpsvpklaaNWl<-*
                      d F+ +v++ +d    p+++aN +
  gi|9002287  1366    DVFDITVANTND----PPTVANQI    1385

He_PIG: domain 5 of 30, from 1414 to 1461: score 45.9, E = 3e-12
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            ++++g +LP +L++d ++ r++GtP ++ +
  gi|9002287  1414    TYTA------------RLSTGDPLPPWLNFDGANRRFYGTPGEADSI 1448

                   Gsytftvtatdgsg<-*
                    ++t+ vta dg g
  gi|9002287  1449 -TWTVEVTADDGNG    1461

Gly_transf_sug: domain 2 of 2, from 1424 to 1443: score 0.5, E = 15
                   *->sldnliniegsQtfld.ersperlnn<-*
                      +l++++      +f++ +r +++ ++
  gi|9002287  1424    PLPPWL------NFDGaNRRFYGTPG    1443

DUF1975: domain 1 of 1, from 1429 to 1440: score 1.3, E = 6
                   *->vNyhgkdyfFnn<-*
                      +N++g++++F++
  gi|9002287  1429    LNFDGANRRFYG    1440

4HBT: domain 1 of 1, from 1447 to 1463: score 2.2, E = 8.9
                CS    EEEEEEEEEETTSTEEE
                   *->savvevevrdedgrlva<-*
                      s+++ vev+++dg  ++
  gi|9002287  1447    SITWTVEVTADDGNGET    1463

Big_2: domain 1 of 22, from 1451 to 1468: score 2.3, E = 5.5
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      t+ +ta+ g+ + +++ t+
  gi|9002287  1451    TVEVTADDGN-GETVTDTF    1468

PKD: domain 3 of 27, from 1451 to 1472: score 2.7, E = 2.7
                CS    EEEEEEEETTCEEEEEEEEEEE
                   *->tVtLtvsngvgsasattttvtV<-*
                      tV +t+ +g+g +++ t  + +
  gi|9002287  1451    TVEVTADDGNGETVTDTFDIAI    1472

He_PIG: domain 6 of 30, from 1514 to 1561: score 37.7, E = 6.6e-10
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+             + +gg+LP++L++d+ + +++GtP+++
  gi|9002287  1514    TYTA------------ELFTGGALPAWLNFDANARTFSGTPSTS-DI 1547

                   Gsytftvtatdgsg<-*
                   G++ +++ a dg g
  gi|9002287  1548 GTTHVRLIADDGNG    1561

DAG1: domain 3 of 6, from 1528 to 1573: score 4.0, E = 0.23
                CS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX
                   *->WvqfnSksqllYGlPdsehiGkhEYflkAtD.kGGlsAvDAlevvV<
                      W+ f+ +   + G P  ++iG     l A D+ GG  A D + + V
  gi|9002287  1528    WLNFDANARTFSGTPSTSDIGTTHVRLIADDgNGGTPAEDSFNITV  1573

                CS
                   -*

  gi|9002287     -    -

PKD: domain 4 of 27, from 1551 to 1573: score 2.1, E = 4.1
                CS    EEEEEEEETTCEEEEEE EEEEE
                   *->tVtLtvsngvgsasatt.ttvtV<-*
                      +V+L + +g+g + a ++ ++tV
  gi|9002287  1551    HVRLIADDGNGGTPAEDsFNITV    1573

Wzz: domain 1 of 1, from 1563 to 1593: score 3.2, E = 1.9
                   *->engkdtgiltvsvtgedpeeaakiansiaev<-*
                      ++ +d+  +tv+ t +dp  a++ia++ a++
  gi|9002287  1563    TPAEDSFNITVTDTNDDPYIANAIADQAATE    1593

PKD: domain 5 of 27, from 1605 to 1672: score 1.2, E = 8.1
                CS    E-SS.SSSEEEECSSEEEEEESS.
                   *->dFGDggspgttstepnvtHtYskg.......................
                      +FGD         + + t+t   +++   ++  + ++++++ +++++
  gi|9002287  1605    TFGD-------YDGDTLTYTAQLSggalwpgwltftpgtrtfsgtpd 1644

                CS ...SEEEEEEEEEEETTCEEEEEEEEEEE
                   sVtpGtYtVtLtvsngvgsasattttvtV<-*
                   ++ +Gt t+ Lt+ +g+g + at  t+ +
  gi|9002287  1645 NGDVGTITIELTADDGNGGTPAT-ETFDI    1672

He_PIG: domain 7 of 30, from 1615 to 1662: score 19.4, E = 0.0001
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++gg   P +Lt+ + t +++GtP+ +
  gi|9002287  1615    TYTA------------QLSGGALWPGWLTFTPGTRTFSGTPDNG-DV 1648

                   Gsytftvtatdgsg<-*
                   G+ t+ +ta dg g
  gi|9002287  1649 GTITIELTADDGNG    1662

RepA_C: domain 1 of 1, from 1623 to 1634: score 0.0, E = 9.1
                   *->rgLweEHstVtLSe<-*
                      ++Lw+  +++t+++
  gi|9002287  1623    GALWP--GWLTFTP    1634

CARDB: domain 3 of 3, from 1636 to 1661: score 2.8, E = 4.3
                   *->tvsfswtpersiteGnyttlkvvvDpeN<-*
                      t++fs tp+ ++ +G+ t +++++D +N
  gi|9002287  1636    TRTFSGTPD-NGDVGTIT-IELTADDGN    1661

Big_2: domain 2 of 22, from 1648 to 1668: score 1.4, E = 10
                CS    SS-EEEEEEETT.TEEEEEEE
                   *->kGtatItatsgdgnksasvtv<-*
                      +Gt tI+ t++dgn + ++t
  gi|9002287  1648    VGTITIELTADDGNGGTPATE    1668

Phage_X: domain 2 of 2, from 1683 to 1699: score 1.0, E = 10
                   *->kpaqiPdWYvepvlstn<-*
                      ++++iPd++   +++++
  gi|9002287  1683    VDNAIPDQAATEDSPFS    1699

He_PIG: domain 8 of 30, from 1717 to 1764: score 35.3, E = 3.2e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  1717    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 1750

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  1751 GTISVEVVATDNDG    1764

DAG1: domain 4 of 6, from 1731 to 1778: score 2.1, E = 0.74
                CS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX
                   *->WvqfnSksqllYGlPdsehiGkhEYflkAtDk.GGlsAvDAlevvVs
                      W+ f      + G P  +++G      +AtD +GG +A D + +vVs
  gi|9002287  1731    WLTFTPATRTFSGTPANGDVGTISVEVVATDNdGGTTASDVFDIVVS 1777

                CS X
                   p<-*
                   +
  gi|9002287  1778 N    1778

Aegerolysin: domain 2 of 11, from 1745 to 1760: score 1.1, E = 8.7
                   *->sesGalGtVtvtvQtssrk<-*
                      +++G+ Gt+ v+v   +++
  gi|9002287  1745    PANGDVGTISVEV---VAT    1760

Flp_Fap: domain 1 of 12, from 1750 to 1780: score 2.4, E = 13
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v ++  a+ +++g t+ +++F  ++++++
  gi|9002287  1750    VGTISVEVV--ATDNDGG-TTASDVFDIVVSNTD    1780

PKD: domain 6 of 27, from 1750 to 1776: score 1.5, E = 6.2
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V ++++++ g ++a++   ++V
  gi|9002287  1750    VGTISVEVVATDNDGGTTASDvFDIVV    1776

He_PIG: domain 9 of 30, from 1819 to 1866: score 34.6, E = 4.8e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  1819    TYSA------------QLSGGGSLPTWLTFTPATRTFSGTPANG-DV 1852

                   Gsytftvtatdgsg<-*
                   G+ ++ + atd  g
  gi|9002287  1853 GTISVEIIATDDDG    1866

Flp_Fap: domain 2 of 12, from 1852 to 1882: score 0.9, E = 31
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v ii  a+ +++g t+ +++F   +++++
  gi|9002287  1852    VGTISVEII--ATDDDGG-TTASDVFDITVSNTD    1882

Big_2: domain 3 of 22, from 1856 to 1874: score 1.5, E = 9.5
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ I at +dg+++as  +
  gi|9002287  1856    SVEIIATDDDGGTTASDVF    1874

PKD: domain 7 of 27, from 1861 to 1878: score 0.6, E = 12
                CS    EEETTCEEEEEE EEEEE
                   *->vsngvgsasatt.ttvtV<-*
                      ++++ g ++a++   +tV
  gi|9002287  1861    ATDDDGGTTASDvFDITV    1878

He_PIG: domain 10 of 30, from 1921 to 1968: score 34.6, E = 5e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  1921    TYSA------------QLSGGGSLPTWLTFTPATRTFSGTPANG-DV 1954

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  1955 GTISVEVIATDNDG    1968

Flp_Fap: domain 3 of 12, from 1954 to 1984: score 0.4, E = 42
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++ +
  gi|9002287  1954    VGTISVEVI--ATDNDGG-TTASDVFDIVVANAD    1984

PKD: domain 8 of 27, from 1954 to 1980: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  1954    VGTISVEVIATDNDGGTTASDvFDIVV    1980

Big_2: domain 4 of 22, from 1958 to 1976: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  1958    SVEVIATDNDGGTTASDVF    1976

Mpt_N: domain 1 of 6, from 1975 to 1981: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  1975    VFDIVVA    1981

Sarcoglycan_2: domain 1 of 6, from 2016 to 2065: score 0.2, E = 4.3
                   *->stVksdqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvG
                      s V  d +ty a L g  +LP WL +++ +        GTPt  +vG
  gi|9002287  2016    SDVG-DTLTYTAQLSGGGALPTWLTFTPATRTFS----GTPTNGDVG 2057

                   kdlvleVtA<-*
                      + eV+A
  gi|9002287  2058 TI-SVEVIA    2065

He_PIG: domain 11 of 30, from 2023 to 2070: score 35.0, E = 3.8e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  2023    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPTNG-DV 2056

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2057 GTISVEVIATDNDG    2070

Aegerolysin: domain 3 of 11, from 2050 to 2066: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  2050    TPTN----GDVGTISVEV---IAT    2066

Flp_Fap: domain 4 of 12, from 2056 to 2086: score 3.6, E = 5.9
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++++
  gi|9002287  2056    VGTISVEVI--ATDNDGG-TTASDVFDIVVSNTD    2086

PKD: domain 9 of 27, from 2056 to 2082: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2056    VGTISVEVIATDNDGGTTASDvFDIVV    2082

Big_2: domain 5 of 22, from 2060 to 2078: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2060    SVEVIATDNDGGTTASDVF    2078

DPPIV_N: domain 1 of 1, from 2095 to 2120: score -0.1, E = 6
                CS    SSTTSSSS.----EEEE-TTSSEEEEE--SSSS
                   *->LTdnsgdhrCqyysasFSpngkyyvltysgPdt<-*
                      L d++ ++     +a+FS  ++++++++s+Pd+
  gi|9002287  2095    LVDQAATE-----DAAFS--YQFAANSFSDPDV    2120

He_PIG: domain 12 of 30, from 2125 to 2172: score 36.5, E = 1.4e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  2125    TYSA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 2158

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2159 GTISVEVIATDNDG    2172

PKD: domain 10 of 27, from 2158 to 2184: score 2.3, E = 3.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  2158    VGTISVEVIATDNDGGTTASDvFDITV    2184

Big_2: domain 6 of 22, from 2162 to 2180: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2162    SVEVIATDNDGGTTASDVF    2180

Sarcoglycan_2: domain 2 of 6, from 2220 to 2269: score 0.2, E = 4.3
                   *->stVksdqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvG
                      s V  d +ty a L g  +LP WL +++ +        GTPt  +vG
  gi|9002287  2220    SDVG-DTLTYTAQLSGGGALPTWLTFTPATRTFS----GTPTNGDVG 2261

                   kdlvleVtA<-*
                      + eV+A
  gi|9002287  2262 TI-SVEVIA    2269

He_PIG: domain 13 of 30, from 2227 to 2274: score 35.0, E = 3.8e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  2227    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPTNG-DV 2260

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2261 GTISVEVIATDNDG    2274

Aegerolysin: domain 4 of 11, from 2254 to 2270: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  2254    TPTN----GDVGTISVEV---IAT    2270

Flp_Fap: domain 5 of 12, from 2260 to 2290: score 3.6, E = 5.9
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++++
  gi|9002287  2260    VGTISVEVI--ATDNDGG-TTASDVFDIVVSNTD    2290

PKD: domain 11 of 27, from 2260 to 2286: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2260    VGTISVEVIATDNDGGTTASDvFDIVV    2286

Big_2: domain 7 of 22, from 2264 to 2282: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2264    SVEVIATDNDGGTTASDVF    2282

Sarcoglycan_2: domain 3 of 6, from 2322 to 2371: score 0.3, E = 4
                   *->stVksdqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvG
                      + V  d +ty a L g  +LP WL +++ +        GTPt  +vG
  gi|9002287  2322    PDVG-DTLTYTAQLSGGGALPTWLTFTPATRTFS----GTPTNGDVG 2363

                   kdlvleVtA<-*
                      + eV+A
  gi|9002287  2364 TI-SVEVIA    2371

He_PIG: domain 14 of 30, from 2329 to 2376: score 35.0, E = 3.8e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  2329    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPTNG-DV 2362

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2363 GTISVEVIATDNDG    2376

Aegerolysin: domain 5 of 11, from 2356 to 2372: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  2356    TPTN----GDVGTISVEV---IAT    2372

Flp_Fap: domain 6 of 12, from 2362 to 2392: score 3.6, E = 5.9
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++++
  gi|9002287  2362    VGTISVEVI--ATDNDGG-TTASDVFDIVVSNTD    2392

PKD: domain 12 of 27, from 2362 to 2388: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2362    VGTISVEVIATDNDGGTTASDvFDIVV    2388

Big_2: domain 8 of 22, from 2366 to 2384: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2366    SVEVIATDNDGGTTASDVF    2384

He_PIG: domain 15 of 30, from 2431 to 2478: score 36.3, E = 1.6e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  2431    TYTA------------QLSGGGALPAWLTFTPATRTFSGTPANG-DV 2464

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2465 GTISVEVIATDNDG    2478

Flp_Fap: domain 7 of 12, from 2464 to 2494: score 0.1, E = 53
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++ +
  gi|9002287  2464    VGTISVEVI--ATDNDGG-TTASDVFDIVVANSD    2494

PKD: domain 13 of 27, from 2464 to 2490: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2464    VGTISVEVIATDNDGGTTASDvFDIVV    2490

Big_2: domain 9 of 22, from 2468 to 2486: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2468    SVEVIATDNDGGTTASDVF    2486

Mpt_N: domain 2 of 6, from 2485 to 2491: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  2485    VFDIVVA    2491

He_PIG: domain 16 of 30, from 2533 to 2580: score 36.5, E = 1.4e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  2533    TYSA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 2566

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2567 GTISVEVIATDNDG    2580

PKD: domain 14 of 27, from 2566 to 2592: score 2.3, E = 3.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  2566    VGTISVEVIATDNDGGTTASDvFDITV    2592

Big_2: domain 10 of 22, from 2570 to 2588: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2570    SVEVIATDNDGGTTASDVF    2588

Sarcoglycan_2: domain 4 of 6, from 2628 to 2677: score 0.5, E = 3.6
                   *->stVksdqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvG
                      + V  d +ty a L g   LP WL +++ +        GTPt  +vG
  gi|9002287  2628    PDVG-DTLTYTAQLSGGGSLPAWLTFTPATRTFS----GTPTNGDVG 2669

                   kdlvleVtA<-*
                    + + eV+A
  gi|9002287  2670 TV-SVEVIA    2677

He_PIG: domain 17 of 30, from 2635 to 2682: score 36.0, E = 2e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  2635    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPTNG-DV 2668

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2669 GTVSVEVIATDNDG    2682

Aegerolysin: domain 6 of 11, from 2662 to 2678: score 1.8, E = 5.6
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ GtV v+v    ++
  gi|9002287  2662    TPTN----GDVGTVSVEV---IAT    2678

PKD: domain 15 of 27, from 2668 to 2694: score 3.4, E = 1.6
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2668    VGTVSVEVIATDNDGGTTASDvFDIVV    2694

Big_2: domain 11 of 22, from 2672 to 2690: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2672    SVEVIATDNDGGTTASDVF    2690

Mpt_N: domain 3 of 6, from 2689 to 2695: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  2689    VFDIVVA    2695

He_PIG: domain 18 of 30, from 2737 to 2784: score 35.2, E = 3.3e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  2737    TYSA------------QLSGGGSLPTWLTFTPATRTFSGTPTNG-DV 2770

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2771 GTISVEVIATDNDG    2784

Aegerolysin: domain 7 of 11, from 2764 to 2780: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  2764    TPTN----GDVGTISVEV---IAT    2780

PKD: domain 16 of 27, from 2770 to 2796: score 1.4, E = 6.7
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  2770    VGTISVEVIATDNDGGTTASDiFDIVV    2796

Big_2: domain 12 of 22, from 2774 to 2792: score 1.8, E = 7.8
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2774    SVEVIATDNDGGTTASDIF    2792

He_PIG: domain 19 of 30, from 2839 to 2886: score 34.4, E = 5.7e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  2839    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPANG-DV 2872

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2873 GTISVEVIATDNDG    2886

PKD: domain 17 of 27, from 2872 to 2898: score 2.3, E = 3.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  2872    VGTISVEVIATDNDGGTTASDvFDITV    2898

Big_2: domain 13 of 22, from 2876 to 2894: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2876    SVEVIATDNDGGTTASDVF    2894

He_PIG: domain 20 of 30, from 2941 to 2988: score 36.5, E = 1.4e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  2941    TYSA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 2974

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  2975 GTISVEVIATDNDG    2988

PKD: domain 18 of 27, from 2974 to 3000: score 2.3, E = 3.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  2974    VGTISVEVIATDNDGGTTASDvFDITV    3000

Big_2: domain 14 of 22, from 2978 to 2996: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  2978    SVEVIATDNDGGTTASDVF    2996

Sarcoglycan_2: domain 5 of 6, from 3036 to 3085: score 0.5, E = 3.6
                   *->stVksdqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvG
                      + V  d +ty a L g   LP WL +++ +        GTPt  +vG
  gi|9002287  3036    PDVG-DTLTYTAQLSGGGSLPAWLTFTPATRTFS----GTPTNGDVG 3077

                   kdlvleVtA<-*
                    + + eV+A
  gi|9002287  3078 TV-SVEVIA    3085

He_PIG: domain 21 of 30, from 3043 to 3090: score 36.0, E = 2e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  3043    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPTNG-DV 3076

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3077 GTVSVEVIATDNDG    3090

Aegerolysin: domain 8 of 11, from 3070 to 3086: score 1.8, E = 5.6
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ GtV v+v    ++
  gi|9002287  3070    TPTN----GDVGTVSVEV---IAT    3086

Flp_Fap: domain 8 of 12, from 3076 to 3106: score 0.3, E = 47
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ ++v +i  a+ +++g t+ +++F+ ++++ +
  gi|9002287  3076    VGTVSVEVI--ATDNDGG-TTASDVFNIVVANSD    3106

PKD: domain 19 of 27, from 3076 to 3102: score 4.4, E = 0.84
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++  +++V
  gi|9002287  3076    VGTVSVEVIATDNDGGTTASDvFNIVV    3102

Big_2: domain 15 of 22, from 3080 to 3098: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3080    SVEVIATDNDGGTTASDVF    3098

He_PIG: domain 22 of 30, from 3145 to 3192: score 35.9, E = 2.2e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  3145    TYSA------------QLSGGGSLPAWLTFTPATRTFNGTPANG-DV 3178

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3179 GTISVEVIATDNDG    3192

Erg28: domain 2 of 2, from 3153 to 3170: score 0.2, E = 19
                   *->mglLpyWLlfVSvvslfN<-*
                       g Lp WL f   +++fN
  gi|9002287  3153    GGSLPAWLTFTPATRTFN    3170

Flp_Fap: domain 9 of 12, from 3178 to 3208: score 0.4, E = 42
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++ +
  gi|9002287  3178    VGTISVEVI--ATDNDGG-TTASDVFDIVVANAD    3208

PKD: domain 20 of 27, from 3178 to 3204: score 0.9, E = 9.8
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  3178    VGTISVEVIATDNDGGTTASDvFDIVV    3204

Big_2: domain 16 of 22, from 3182 to 3200: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3182    SVEVIATDNDGGTTASDVF    3200

Mpt_N: domain 4 of 6, from 3199 to 3205: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  3199    VFDIVVA    3205

Sarcoglycan_2: domain 6 of 6, from 3244 to 3289: score 0.0, E = 4.9
                   *->dqvtyeasLkgyPDLPsWLRYlqsrpYsaGfLYGTPtaenvGkdlvl
                      d +ty a L g  +LP WL +++ +        GTPt  +vG   +
  gi|9002287  3244    DTLTYTAQLSGGGALPTWLTFTPATRTFS----GTPTNGDVGTI-SV 3285

                   eVtA<-*
                   eV+A
  gi|9002287  3286 EVIA    3289

He_PIG: domain 23 of 30, from 3247 to 3294: score 36.0, E = 2e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  3247    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPTNG-DV 3280

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3281 GTISVEVIATDDDG    3294

Aegerolysin: domain 9 of 11, from 3274 to 3290: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  3274    TPTN----GDVGTISVEV---IAT    3290

PKD: domain 21 of 27, from 3280 to 3306: score 2.8, E = 2.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  3280    VGTISVEVIATDDDGGTTASDvFDITV    3306

Big_2: domain 17 of 22, from 3284 to 3302: score 0.7, E = 16
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3284    SVEVIATDDDGGTTASDVF    3302

He_PIG: domain 24 of 30, from 3349 to 3396: score 31.5, E = 3.6e-08
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP  +
  gi|9002287  3349    TYTA------------QLSGGGALPTWLTFTPATRTFSGTPVNG-DV 3382

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3383 GTISVEVVATDNDG    3396

Aegerolysin: domain 10 of 11, from 3379 to 3392: score 0.5, E = 13
                   *->sGalGtVtvtvQtssrk<-*
                      +G+ Gt+ v+v   +++
  gi|9002287  3379    NGDVGTISVEV---VAT    3392

PKD: domain 22 of 27, from 3382 to 3408: score 1.5, E = 6.2
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V ++++++ g ++a++   ++V
  gi|9002287  3382    VGTISVEVVATDNDGGTTASDvFDIVV    3408

Mpt_N: domain 5 of 6, from 3403 to 3409: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  3403    VFDIVVA    3409

He_PIG: domain 25 of 30, from 3451 to 3498: score 37.3, E = 8.4e-10
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  3451    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPANS-DV 3484

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3485 GTISVEVIATDNDG    3498

Cadherin: domain 4 of 5, from 3476 to 3492: score 2.5, E = 5.2
                CS    ...S---EEEE--EEE-
                   *->gggpplsstatvtitVl<-*
                      +g+p+ s+++t+ ++V+
  gi|9002287  3476    SGTPANSDVGTISVEVI    3492

Flp_Fap: domain 10 of 12, from 3484 to 3514: score 0.4, E = 42
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++ +
  gi|9002287  3484    VGTISVEVI--ATDNDGG-TTASDVFDIVVANAD    3514

Big_2: domain 18 of 22, from 3488 to 3506: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3488    SVEVIATDNDGGTTASDVF    3506

Mpt_N: domain 6 of 6, from 3505 to 3511: score 1.3, E = 31
                   *->pFDvnmA<-*
                      +FD+++A
  gi|9002287  3505    VFDIVVA    3511

He_PIG: domain 26 of 30, from 3553 to 3600: score 35.5, E = 2.7e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      ty++            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  3553    TYSA------------QLSGGGSLPTWLTFTPATRTFSGTPANG-DV 3586

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3587 GTISVEVIATDDDG    3600

PKD: domain 23 of 27, from 3586 to 3612: score 2.8, E = 2.5
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   +tV
  gi|9002287  3586    VGTISVEVIATDDDGGTTASDvFDITV    3612

Big_2: domain 19 of 22, from 3590 to 3608: score 0.7, E = 16
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3590    SVEVIATDDDGGTTASDVF    3608

He_PIG: domain 27 of 30, from 3655 to 3702: score 36.9, E = 1.1e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtPt +
  gi|9002287  3655    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPTNG-DV 3688

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3689 GTISVEVIATDNDG    3702

Aegerolysin: domain 11 of 11, from 3682 to 3698: score 0.4, E = 14
                   *->ggwnisesGalGtVtvtvQtssrk<-*
                      +++n    G+ Gt+ v+v    ++
  gi|9002287  3682    TPTN----GDVGTISVEV---IAT    3698

Flp_Fap: domain 11 of 12, from 3688 to 3718: score 1.0, E = 29
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++++
  gi|9002287  3688    VGTISVEVI--ATDNDGG-TTASDVFYIVVSNTD    3718

PKD: domain 24 of 27, from 3688 to 3714: score 2.0, E = 4.6
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++  +++V
  gi|9002287  3688    VGTISVEVIATDNDGGTTASDvFYIVV    3714

Big_2: domain 20 of 22, from 3692 to 3710: score 1.4, E = 9.9
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3692    SVEVIATDNDGGTTASDVF    3710

He_PIG: domain 28 of 30, from 3757 to 3804: score 36.2, E = 1.7e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  3757    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 3790

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3791 GTISVEVIATDNDG    3804

DAG1: domain 5 of 6, from 3771 to 3818: score 2.3, E = 0.66
                CS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX
                   *->WvqfnSksqllYGlPdsehiGkhEYflkAtDk.GGlsAvDAlevvVs
                      W+ f      + G P  +++G       AtD +GG +A DA+ +vV
  gi|9002287  3771    WLTFTPATRTFSGTPANGDVGTISVEVIATDNdGGTTASDAFDIVVA 3817

                CS X
                   p<-*
                   +
  gi|9002287  3818 N    3818

Flp_Fap: domain 12 of 12, from 3790 to 3820: score 3.7, E = 5.6
                   *->AalIAvaiiAVayvttlgitaLktkFtkigtalt<-*
                      ++ I+v +i  a+ +++g t+ +++F  ++++++
  gi|9002287  3790    VGTISVEVI--ATDNDGG-TTASDAFDIVVANTD    3820

PKD: domain 25 of 27, from 3790 to 3816: score 1.6, E = 6
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g ++a++   ++V
  gi|9002287  3790    VGTISVEVIATDNDGGTTASDaFDIVV    3816

Big_2: domain 21 of 22, from 3794 to 3812: score 0.9, E = 14
                CS    -EEEEEEETT.TEEEEEEE
                   *->tatItatsgdgnksasvtv<-*
                      ++ + at +dg+++as  +
  gi|9002287  3794    SVEVIATDNDGGTTASDAF    3812

He_PIG: domain 29 of 30, from 3859 to 3906: score 36.2, E = 1.7e-09
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                      tyt+            +++ggg+LP++Lt+ ++t +++GtP+ +
  gi|9002287  3859    TYTA------------QLSGGGSLPAWLTFTPATRTFSGTPANG-DV 3892

                   Gsytftvtatdgsg<-*
                   G+ ++ v atd  g
  gi|9002287  3893 GTISVEVIATDNDG    3906

PKD: domain 26 of 27, from 3892 to 3918: score 1.5, E = 6.1
                CS    SEEEEEEEEEEETTCEEEEEE EEEEE
                   *->pGtYtVtLtvsngvgsasatt.ttvtV<-*
                      +Gt +V + ++++ g  +a+++ ++ V
  gi|9002287  3892    VGTISVEVIATDNDGGITASDsFNINV    3918

Peptidase_C26: domain 1 of 1, from 3898 to 3910: score -2.9, E = 7.5
                CS    EEEEEEE.SSS-EE
                   *->rVeArapdDGviEA<-*
                      +V+A++  DG+i A
  gi|9002287  3898    EVIATDN-DGGITA    3910

DAG1: domain 6 of 6, from 3931 to 4001: score 2.1, E = 0.77
                CS    XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXX..X..XXX
                   *->lpdssavvGraFrlhvptellassedqGiikiseadKdgheLkapsw
                      +pd  +v Gr F ++ p+ ++ + +    +  ++    g  L  p+w
  gi|9002287  3931    IPDQQVVAGRDFSMQLPPSTFIDVDVGDSLVYTANLISGAPL--PAW 3975

                CS XXXXXXXXXXXXXXXXXXXXXXXXXX
                   LhwdadsrtLqGLPLdtDKGVhyIsV<-*
                   L +d   +   G P   D G + + V
  gi|9002287  3976 LVFDEVAQSFSGRPVTSDIGSYTVEV    4001

Alliinase_C: domain 1 of 1, from 3952 to 3962: score 1.6, E = 2.8
                   *->adldsGDPlfL<-*
                      +d+d GD+l++
  gi|9002287  3952    IDVDVGDSLVY    3962

He_PIG: domain 30 of 30, from 3961 to 4008: score 20.3, E = 5.6e-05
                   *->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
                       yt+             + +g +LP++L +d  + +++G+P ++
  gi|9002287  3961    VYTA------------NLISGAPLPAWLVFDEVAQSFSGRPVTS-DI 3994

                   Gsytftvtatdgsg<-*
                   Gsyt+ v a dg g
  gi|9002287  3995 GSYTVEVIANDGNG    4008

Phospholip_A2_3: domain 1 of 1, from 3963 to 3977: score 1.1, E = 5.3
                   *->TdtlLfsvplptFta<-*
                      T++l++ +plp++++
  gi|9002287  3963    TANLISGAPLPAWLV    3977

EMG1: domain 1 of 1, from 3967 to 3986: score 0.3, E = 6
                   *->IsnypLsAatVcsricsafE<-*
                      Is+ pL A+ V  ++  +f
  gi|9002287  3967    ISGAPLPAWLVFDEVAQSFS    3986

PKD: domain 27 of 27, from 3995 to 4017: score 1.3, E = 7.4
                CS    EEEEEEEEEEETTCEEEEEEEEEEE
                   *->GtYtVtLtvsngvgsasattttvtV<-*
                      G+YtV + +++g+g   a  ++  V
  gi|9002287  3995    GSYTVEVIANDGNGGIPA--RESFV    4017

Y_Y_Y: domain 3 of 4, from 3998 to 4021: score 2.6, E = 4.8
                   *->kvkakdkdgnwsyddiasltftvl<-*
                      +v+++ +dgn +++++ s+ ++v+
  gi|9002287  3998    TVEVIANDGNGGIPARESFVLVVH    4021

DUF566: domain 1 of 1, from 4022 to 4040: score 2.7, E = 1.4
                   *->ssLvsELarvaaqEkalLd<-*
                      s+++ +La++a+qE a  d
  gi|9002287  4022    SPTAVQLANIATQEDAAND    4040

Lipoprotein_10: domain 1 of 1, from 4108 to 4121: score 1.2, E = 8
                   *->gigsnFNAaVnska<-*
                      ++ s+FN++V+s
  gi|9002287  4108    TLESTFNVTVSSVN    4121

GTP_cyclohydroI: domain 1 of 1, from 4134 to 4149: score 3.0, E = 1.9
                   *->GgiktgsetvTsaagg<-*
                      G+i ++s t+T +++g
  gi|9002287  4134    GVIEPDSLTRTVSVMG    4149

DUF1869: domain 1 of 1, from 4156 to 4169: score -0.8, E = 9.2
                   *->nnkatyllTVTNNsN<-*
                      n+    + TVT NsN
  gi|9002287  4156    NGED-LVYTVTENSN    4169

Cadherin: domain 5 of 5, from 4160 to 4184: score 0.4, E = 21
                CS    --EEE-SS...S---EEEEE---S..-TT
                   *->ysasvpEnapvGtevltvtAtDaDdPlgp<-*
                       + +v En+  ++ +++v A+D+   +g+
  gi|9002287  4160    LVYTVTENS--NPAIAQVVAVDSE--RGT    4184

FliD_C: domain 1 of 1, from 4184 to 4208: score 1.6, E = 5.2
                   *->tlnLKkkateggetatlsv.sqDtek<-*
                      t+++ ++a+ +g ta+++v+++D+++
  gi|9002287  4184    TFTI-NRAGAEGGTANITVrATDNDG    4208

Big_2: domain 22 of 22, from 4195 to 4213: score 0.7, E = 17
                CS    S-EEEEEEETT.TEEEEEEE
                   *->GtatItatsgdgnksasvtv<-*
                      Gta+It+ + d n++ +v+
  gi|9002287  4195    GTANITVRATD-NDGGWVER    4213

Y_Y_Y: domain 4 of 4, from 4199 to 4220: score 10.4, E = 0.022
                   *->ikvkakdkdgnwsyddiasltftvl<-*
                      i+v+a+d+dg w     +++++t++
  gi|9002287  4199    ITVRATDNDGGWVE---RTVQITIQ    4220

SoxZ: domain 1 of 1, from 4204 to 4219: score 2.2, E = 4.1
                CS    EETTS-EEEEEEEE--
                   *->tDnkGssetaeakItv<-*
                      tDn+G+ ++ ++ It+
  gi|9002287  4204    TDNDGGWVERTVQITI    4219

PilP: domain 1 of 1, from 4208 to 4220: score 0.6, E = 9.9
                   *->GcWleRpvkLaLk<-*
                      G+W eR v  +
  gi|9002287  4208    GGWVERTVQITIQ    4220

NPV_P10: domain 1 of 1, from 4219 to 4245: score 3.8, E = 2.5
                   *->IqdiLngdevePEPeaeapeppvPeiPd<-*
                      Iq+ L+   +ePEP++e+ ++p+Pe P+
  gi|9002287  4219    IQEKLT-SPLEPEPQPEPQPEPEPETPE    4245

SWIRM: domain 1 of 1, from 4281 to 4305: score 1.9, E = 7.9
                   *->lkeaaraswldlsalppiEllsepE<-*
                      ++++a a++l++ +++++++  e E
  gi|9002287  4281    IVVEAVAPPLPPASVFEFYEEVERE    4305

Ribosomal_S5: domain 1 of 1, from 4354 to 4367: score 2.1, E = 8.6
                CS    HHHHHTTS-EE---
                   *->AiedAKknlieVpr<-*
                      Ai+dA+k++ eV
  gi|9002287  4354    AIDDARKHMEEVYA    4367

FAP: domain 1 of 1, from 4362 to 4392: score 3.1, E = 0.72
                   *->mdqvdvnstrRkGlsttlaiaavagasaval<-*
                      m++v +++++R+G+++t++++  +g  + al
  gi|9002287  4362    MEEVYAEQKQREGMLATVTLSLTTGLIIWAL    4392

PSI_PsaF: domain 1 of 1, from 4397 to 4420: score 0.5, E = 7
                CS    --------------..--------.G
                   *->rllallllstlllssdfAPpaaaADv<-*
                       l al++   l+ + d  P+++ ADv
  gi|9002287  4397    LLVALFSMMPLWRGVD--PLPVLADV    4420

//