hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /usr1/pfam-23.0/Pfam_fs
Sequence file: 91795073.fa
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Query sequence: gi|91795073|ref|YP_564724.1|
Accession: [none]
Description: cadherin [Shewanella denitrificans OS217]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
JmjC JmjC domain 29.5 3.4e-08 4
He_PIG Putative Ig domain 21.0 3.6e-05 2
Fil_haemagg Haemagluttinin repeat 17.9 0.0002 3
DUF11 Domain of unknown function DUF11 19.1 0.00024 5
OmpA_membrane OmpA-like transmembrane domain 15.4 0.00092 1
LysM LysM domain 13.5 0.0062 4
Chlam_PMP Chlamydia polymorphic membrane protei 14.9 0.009 4
Cadherin Cadherin domain 11.1 0.018 1
DUF237 MG032/MG096/MG288 family 1 9.9 0.039 4
Big_2 Bacterial Ig-like domain (group 2) 9.1 0.058 2
TSP_3 Thrombospondin type 3 repeat 9.4 0.13 2
FG-GAP FG-GAP repeat 8.4 0.19 4
PhoD PhoD-like phosphatase 4.7 0.26 1
RTX RTX N-terminal domain 1.7 0.46 1
Disintegrin Disintegrin 4.6 0.62 1
Secretin_N_2 Secretin N-terminal domain 4.6 0.75 1
Radial_spoke_3 Radial spoke protein 3 2.8 0.84 1
HutP HutP 4.7 0.88 1
Cyc-maltodext_N Cyclomaltodextrinase, N-terminal 3.8 0.94 1
Gag_p30 Gag P30 core shell protein 3.1 0.95 1
Lipoprotein_10 Putative mycoplasma lipoprotein, C-te 4.5 1 4
DUF416 Protein of unknown function, DUF 3.9 1.1 1
Tmemb_170 Putative transmembrane protein 170 5.2 1.2 1
YaeQ YaeQ protein 3.0 1.3 1
Peptidase_A4 Peptidase A4 family 1.9 1.3 1
7TM_GPCR_Sri Serpentine type 7TM GPCR chemorecepto 2.5 1.4 1
Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminu 3.9 1.4 1
HYR HYR domain 4.0 1.5 2
Gp5_C Gp5 C-terminal repeat (3 copies) 5.5 1.5 2
DUF842 Eukaryotic protein of unknown functio 4.0 1.5 1
Autotransporter Autotransporter beta-domain 3.0 1.8 1
NEAT Iron Transport-associated domain 3.9 1.8 1
DUF479 Protein of unknown function, DUF479 3.3 2 1
TPP_enzyme_C Thiamine pyrophosphate enzyme, C-term 2.1 2.3 1
Lum_binding Lumazine binding domain 3.1 2.4 1
Big_1 Bacterial Ig-like domain (group 1) 2.3 2.5 1
DUF2328 Uncharacterized protein conserved in 1.3 2.7 1
Fork_head_N Forkhead N-terminal region -1.5 3.1 1
UBX UBX domain 3.4 3.2 1
NosD Periplasmic copper-binding protein (N 3.8 3.3 2
NAD_binding_4 Male sterility protein -0.1 3.4 1
NRPS Nonribosomal peptide synthase 1.0 3.6 1
Pectate_lyase Pectate lyase 1.0 3.8 1
DUF690 Protein of unknown function (DUF690) -0.0 3.8 1
Fimbrial_CS1 CS1 type fimbrial major subunit 0.8 3.9 1
CheC CheC-like family 4.5 4.1 1
SH2 SH2 domain 1.9 4.3 1
Binary_toxB Clostridial binary toxin B/anthrax to 0.0 4.5 1
Alum_res Aluminium resistance protein -0.1 4.5 1
Calx-beta Calx-beta domain 2.7 4.9 1
Alpha-amyl_C2 Alpha-amylase C-terminal beta-sheet d 3.5 5 1
CopC Copper resistance protein CopC 1.6 5.1 1
MucB_RseB MucB/RseB family 0.6 5.2 1
Arylsulfotrans Arylsulfotransferase (ASST) -0.0 5.2 1
Tet_res_leader Tetracycline resistance leader peptid 3.8 5.5 1
Abi CAAX amino terminal protease family 2.0 5.7 1
DUF2388 Protein of unknown function (DUF2388) 1.9 6.1 1
Tenui_NCP Tenuivirus major non-capsid protein 0.2 6.2 1
RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 0.3 6.3 1
Hom_end_hint Hom_end-associated Hint -0.3 6.5 1
Mog1 Ran-interacting Mog1 protein 0.8 6.6 1
DHC Dihaem cytochrome c 1.1 7.1 1
DUF74 Domain of unknown function DUF74 1.4 7.1 1
MspA MspA 1.1 7.2 1
DUF796 Protein of unknown function (DUF796) 1.6 7.4 1
Hexokinase_1 Hexokinase -0.1 7.4 1
KGK KGK domain 0.7 7.6 1
ADSL_C Adenylosuccinate lyase C-terminus 2.0 7.6 1
Cad Cadmium resistance transporter 0.7 7.8 1
Bac_surface_Ag Surface antigen -0.0 8.3 1
OmpW OmpW family 0.5 8.4 1
Peptidase_S13 D-Ala-D-Ala carboxypeptidase 3 (S13) -0.3 8.4 1
BCSC_C Cellulose synthase operon protein C C -0.2 8.5 1
Chal_sti_synt_C Chalcone and stilbene synthases, C-te 0.6 8.7 1
SMP_2 Bacterial virulence factor haemolysin 0.4 8.7 1
DUF1488 Protein of unknown function (DUF1488) 2.1 8.7 1
Flagellin_N Bacterial flagellin N-terminus 1.4 8.7 1
Matrix Viral matrix protein -0.2 8.9 1
DUF963 Schizosaccharomyces pombe repeat of u 2.8 9 1
FliD_N Flagellar hook-associated protein 2 C 2.3 9.1 1
RibD_C RibD C-terminal domain -0.0 9.2 1
Pox_I6 Poxvirus I6-like family -0.7 9.5 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
Radial_spoke_3 1/1 1 18 [. 276 293 .] 2.8 0.84
Hom_end_hint 1/1 71 2550 .. 176 198 .. -0.3 6.5
DUF842 1/1 76 86 .. 123 133 .] 4.0 1.5
Cad 1/1 111 117 .. 1 7 [. 0.7 7.8
NRPS 1/1 129 138 .. 1 10 [. 1.0 3.6
Gag_p30 1/1 150 175 .. 1 29 [. 3.1 0.95
DUF416 1/1 176 188 .. 100 112 .] 3.9 1.1
Big_1 1/1 181 192 .. 21 32 .. 2.3 2.5
FliD_N 1/1 242 256 .. 85 99 .. 2.3 9.1
Big_2 1/2 247 267 .. 69 90 .] 1.7 8.2
CopC 1/1 248 256 .. 139 147 .] 1.6 5.1
Gp5_C 1/2 249 265 .. 9 24 .] 1.0 35
Pox_I6 1/1 249 257 .. 347 355 .] -0.7 9.5
RNA_pol_Rpb1_3 1/1 332 349 .. 228 246 .] 0.3 6.3
MspA 1/1 357 376 .. 1 20 [. 1.1 7.2
Autotransporter 1/1 447 531 .. 202 296 .] 3.0 1.8
YaeQ 1/1 459 486 .. 149 176 .] 3.0 1.3
ADSL_C 1/1 486 500 .. 1 15 [. 2.0 7.6
Fork_head_N 1/1 556 560 .. 162 166 .] -1.5 3.1
Lum_binding 1/1 793 804 .. 1 12 [. 3.1 2.4
RTX 1/1 804 815 .. 656 667 .] 1.7 0.46
Fil_haemagg 1/3 824 859 .. 1 38 [. 4.7 1.3
Flagellin_N 1/1 830 859 .. 111 141 .] 1.4 8.7
DUF2328 1/1 846 864 .. 170 188 .] 1.3 2.7
Fil_haemagg 2/3 861 962 .. 1 75 [] 3.7 2.4
Fil_haemagg 3/3 969 1016 .. 1 75 [] 9.4 0.055
Chlam_PMP 1/4 975 993 .. 1 19 [] 10.7 0.13
Gp5_C 2/2 975 995 .. 4 24 .] 4.5 3
Arylsulfotrans 1/1 982 997 .. 1 16 [. -0.0 5.2
Hexokinase_1 1/1 995 1005 .. 222 232 .] -0.1 7.4
CheC 1/1 1089 1099 .. 28 38 .] 4.5 4.1
HYR 1/2 1090 1100 .. 1 11 [. 3.2 2.5
DUF11 1/5 1101 1112 .. 69 80 .] 4.2 2.9
JmjC 1/4 1107 1124 .. 109 126 .] 7.9 0.082
Chlam_PMP 2/4 1117 1132 .. 1 16 [. 1.4 43
FG-GAP 1/4 1159 1174 .. 1 16 [. 1.4 20
LysM 1/4 1161 1167 .. 1 7 [. 1.6 18
DUF11 2/5 1180 1215 .. 1 36 [. 0.2 37
Lipoprotein_10 1/4 1182 1201 .. 125 144 .] 0.7 11
DUF237 1/4 1185 1198 .. 1 14 [. 0.6 14
DUF11 3/5 1219 1230 .. 69 80 .] 4.2 2.9
JmjC 2/4 1225 1242 .. 109 126 .] 7.9 0.082
Chlam_PMP 3/4 1235 1250 .. 1 16 [. 1.4 43
FG-GAP 2/4 1277 1291 .. 1 15 [. 0.4 42
LysM 2/4 1279 1285 .. 1 7 [. 4.1 3.3
PhoD 1/1 1279 1296 .. 1 18 [. 4.7 0.26
OmpW 1/1 1285 1315 .. 17 49 .. 0.5 8.4
Lipoprotein_10 2/4 1300 1319 .. 125 144 .] 0.7 11
DUF237 2/4 1303 1316 .. 1 14 [. 0.6 14
DUF11 4/5 1337 1348 .. 69 80 .] 6.4 0.73
JmjC 3/4 1343 1360 .. 109 126 .] 7.9 0.082
Chlam_PMP 4/4 1353 1368 .. 1 16 [. 1.4 43
FG-GAP 3/4 1395 1410 .. 1 16 [. 1.4 21
LysM 3/4 1397 1404 .. 1 8 [. 5.6 1.2
Lipoprotein_10 3/4 1418 1437 .. 125 144 .] 0.7 11
DUF237 3/4 1421 1434 .. 1 14 [. 0.6 14
Pectate_lyase 1/1 1431 1462 .. 1 33 [. 1.0 3.8
DUF11 5/5 1455 1466 .. 69 80 .] 4.2 2.9
JmjC 4/4 1461 1478 .. 109 126 .] 5.8 0.34
FG-GAP 4/4 1513 1528 .. 1 16 [. 5.2 1.6
LysM 4/4 1515 1521 .. 1 7 [. 2.2 11
NosD 1/2 1515 1528 .. 40 53 .. 0.0 36
Lipoprotein_10 4/4 1536 1555 .. 125 144 .] 2.3 4
DUF237 4/4 1539 1552 .. 1 14 [. 8.2 0.12
HYR 2/2 1562 1575 .. 1 14 [. 0.8 13
RibD_C 1/1 1567 1579 .. 1 13 [. -0.0 9.2
Peptidase_A4 1/1 1746 1756 .. 217 228 .] 1.9 1.3
Secretin_N_2 1/1 1836 1853 .. 90 107 .] 4.6 0.75
DUF963 1/1 1843 1859 .. 20 36 .] 2.8 9
DHC 1/1 1863 1871 .. 114 122 .] 1.1 7.1
Tet_res_leader 1/1 1872 1890 .. 1 20 [] 3.8 5.5
He_PIG 1/2 1899 1924 .. 37 61 .] 4.5 1.7
He_PIG 2/2 1929 1972 .. 1 61 [] 16.5 0.00068
Alpha-amyl_C2 1/1 1953 1970 .. 1 18 [. 3.5 5
Alpha-L-AF_C 1/1 1960 1980 .. 201 225 .] 3.9 1.4
Peptidase_S13 1/1 1964 1990 .. 212 240 .. -0.3 8.4
Matrix 1/1 2002 2035 .. 1 37 [. -0.2 8.9
DUF1488 1/1 2006 2026 .. 1 24 [. 2.1 8.7
KGK 1/1 2015 2034 .. 24 45 .. 0.7 7.6
SH2 1/1 2089 2105 .. 29 45 .. 1.9 4.3
TPP_enzyme_C 1/1 2121 2141 .. 1 24 [. 2.1 2.3
NAD_binding_4 1/1 2179 2188 .. 277 286 .] -0.1 3.4
Alum_res 1/1 2191 2206 .. 393 408 .] -0.1 4.5
Calx-beta 1/1 2312 2333 .. 88 109 .] 2.7 4.9
UBX 1/1 2348 2363 .. 77 92 .] 3.4 3.2
Fimbrial_CS1 1/1 2358 2364 .. 144 150 .] 0.8 3.9
Big_2 2/2 2373 2395 .. 68 90 .] 7.4 0.18
NEAT 1/1 2414 2438 .. 1 25 [. 3.9 1.8
Cadherin 1/1 2418 2448 .. 65 107 .] 11.1 0.018
TSP_3 1/2 2457 2469 .. 1 15 [] 2.6 14
Mog1 1/1 2464 2474 .. 26 36 .. 0.8 6.6
Binary_toxB 1/1 2471 2483 .. 1 13 [. 0.0 4.5
NosD 2/2 2471 2481 .. 44 54 .. 3.8 3.4
TSP_3 2/2 2472 2487 .. 1 15 [] 6.8 0.76
MucB_RseB 1/1 2473 2502 .. 195 230 .. 0.6 5.2
Chal_sti_synt_C 1/1 2494 2514 .. 1 21 [. 0.6 8.7
DUF690 1/1 2550 2574 .. 329 353 .. -0.0 3.8
7TM_GPCR_Sri 1/1 2572 2582 .. 299 309 .] 2.5 1.4
Disintegrin 1/1 2600 2611 .. 69 80 .] 4.6 0.62
DUF74 1/1 2701 2707 .. 101 107 .] 1.4 7.1
Abi 1/1 2851 2863 .. 103 115 .] 2.0 5.7
Tmemb_170 1/1 2877 2899 .. 29 53 .. 5.2 1.2
DUF2388 1/1 2888 2904 .. 1 17 [. 1.9 6.1
Bac_surface_Ag 1/1 2908 2966 .. 42 98 .. -0.0 8.3
SMP_2 1/1 2908 2925 .. 207 224 .] 0.4 8.7
Tenui_NCP 1/1 2927 2942 .. 1 16 [. 0.2 6.2
OmpA_membrane 1/1 2940 2970 .. 59 93 .. 15.4 0.00092
BCSC_C 1/1 2942 2955 .. 68 81 .. -0.2 8.5
DUF796 1/1 2966 2984 .. 1 29 [. 1.6 7.4
Cyc-maltodext_N 1/1 3042 3052 .. 1 11 [. 3.8 0.94
DUF479 1/1 3054 3063 .. 1 10 [. 3.3 2
HutP 1/1 3061 3071 .. 139 149 .] 4.7 0.88
Alignments of top-scoring domains:
Radial_spoke_3: domain 1 of 1, from 1 to 18: score 2.8, E = 0.84
*->aiIrevvkqRaeiYaglk<-*
+iI e v +Ra Y +lk
gi|9179507 1 MIIDESVDDRAVFYRDLK 18
Hom_end_hint: domain 1 of 1, from 71 to 2550: score -0.3, E = 6.5
CS -GGC-HHHHHHHT
RF xxxxxxxxxxxxx
*->VLlEsghLaqyLk..................................
VL ++hL+++Lk + +++ + + + ++++++ ++ +
gi|9179507 71 VLQNNPHLFNQLKqnlspradilfygcnlasgekgeallayistald 117
CS
RF
..................................................
+ +++++++ +++ + +++ +++ + + + + + ++ +
gi|9179507 118 advaasntptghaqfggdwvlevstgaiehrlpfsapalanwqhvlptfd 167
CS
RF
..................................................
+++++ ++ + + +++++ + + + ++++ + +++++++++++ +
gi|9179507 168 gdggslsganyieadngdgitmtatfngdtadvadggngggssgnvfygv 217
CS
RF
..................................................
+ + ++ + +++ + ++ + +++ ++++ + + +++++++ ++
gi|9179507 218 gatatsvqvsfsspvnissfvyfeadgtastgnytftvtsgsgstivktq 267
CS
RF
..................................................
+ + ++ + + ++ + ++ ++ + +++ + +++ ++ + +++ +
gi|9179507 268 adftllsglagvtltpvdwtsvstftitsdainfspgldtlaytmgnnap 317
CS
RF
..................................................
++ ++++ + ++ + + +++ + ++ + + ++++++ + + +
gi|9179507 318 vltnlngdsvawagvgnyvsldagtslgvsdveldalnggngnyagaslt 367
CS
RF
..................................................
+ ++ +++ + ++++ + ++ + +++ + + +++++ + +
gi|9179507 368 lqrvgtaittdvfgfdtsgalfsvsganlqsggltfatftntsgvlsinf 417
CS
RF
..................................................
+++ ++ +++ + + +++++ + + + ++++ +++ + + +
gi|9179507 418 nssattatkslvqdvlqriqysnntpaadaalryslsdgtasttadvtvt 467
CS
RF
..................................................
+++ ++++++ + + +++ + ++ +++++ + ++ +++
gi|9179507 468 sdsiyvtsttdtatinlnngvsfseavaialadttgsqtlilssaftssm 517
CS
RF
..................................................
+ ++ + ++ + + + +++ +++ + +++ + + ++ + ++
gi|9179507 518 slagnlsiaenltidasaagssfaiagstltldsgftlslthanqlqiss 567
CS
RF
..................................................
+ ++ ++ ++ + ++ + ++++++++++++ +++ + + +++ ++ +++
gi|9179507 568 ningagnlskagagslrltgtnssrtgstsvlggtldidadtnldgantg 617
CS
RF
..................................................
+ ++++ + +++++ +++ + +++ + + +++ +++++++++
gi|9179507 618 vltldggtlamtvtggstfnpniqtinnpitlgaaggsfnptggggrnii 667
CS
RF
..................................................
+ ++ +++++ ++ + + +++++ ++ ++ + ++ +++++ +++
gi|9179507 668 nlsgvisgsgtltkigasvlqlsgnnsysgattitvgglllshnnglgst 717
CS
RF
..................................................
+++++ + ++ + + ++++ ++++++ + + + + + + ++
gi|9179507 718 sgsttvnagsalriaagvvspeplflngtgrnidavdygalgadayslgt 767
CS
RF
..................................................
++ +++ + +++++ + ++++ ++ +++ + +++++++ + ++++
gi|9179507 768 stvsgnielstgtnisvingsnlilsgivsgtatltktdtgsltlagtnt 817
CS
RF
..................................................
+++ ++ ++++ +++ +++ + ++ + + + +++ + ++ ++
gi|9179507 818 nsgatsvsegtlvldngaamadttavsiasgatlrldasetigvlsgagt 867
CS
RF
..................................................
++ + + + +++++ +++ ++++++ +++++++ + +++++ ++ ++
gi|9179507 868 lamngahltlnqtsdssfsggitgsgsnltksgsskltlsgtstytgvts 917
CS
RF
..................................................
++++ + ++ +++++ + +++++ +++++ ++++++ + +++ +
gi|9179507 918 isggslsltgalsgttgatigsggtlegtgslfatsstntltvqsggils 967
CS
RF
..................................................
++ +++++ + +++ + +++ + +++ +++ ++ +++ + ++
gi|9179507 968 pgisgpgtitingnltiasggaltaqitgtvlgsgydsvavngtvdvssa 1017
CS
RF
..................................................
+ + +++ + + +++ + +++ ++ +++ ++ + +++ + ++++ +
gi|9179507 1018 tlnvnhsytaglgdsyrllvndgvdsitgnfsglpqggtvtaagnstvlt 1067
CS
RF
..................................................
+++++ +++++ + + ++++ ++ + + + + ++ + + +
gi|9179507 1068 ayyaatdgggysggnefmlvapvditpptvssvnvpanatyvsgqnldft 1117
CS
RF
..................................................
+ +++ + +++++++ + + +++ + +++++++ + + +++
gi|9179507 1118 infdenitvntgggtpqlaltigattrqanyqsgsgsssllfrytiqsgd 1167
CS
RF
..................................................
++++ ++ +++++ +++ +++ + + ++ +++++ + ++ ++
gi|9179507 1168 adsdgiaigtlatnggtlrdgagnnanltlnsvgptssvlvdavaptvss 1217
CS
RF
..................................................
+ + + + ++ + + + + +++ + +++++++ + + +++ +
gi|9179507 1218 vnvpanatyvsgqnldftinfdenitvntgggtpqlaltigatgrqasyq 1267
CS
RF
..................................................
+++++++ + + +++ ++++ ++ +++++ +++ +++ + + ++
gi|9179507 1268 sgsgtssllyrytvqsgdadsdgivisslasnggtlrdgagnnanltlns 1317
CS
RF
..................................................
+++ + + ++ ++ + + +++ ++ + + + + +++ + +++++
gi|9179507 1318 vgstasvlvdavtpivssvnvpanttyvsgqnldftinfdenitvntggg 1367
CS
RF
..................................................
++ + +++ + +++++++ + + ++++++++ ++ ++
gi|9179507 1368 tpqlaliigattrqatylsgsgtssllyrytvqngdtdsdgiaigslasn 1417
CS
RF
..................................................
+++ +++ +++ + + ++ +++ + + ++ ++ + + + + ++ +
gi|9179507 1418 ggtlrdgagnnanltlnsvgstasvlvdaaapsissvnvpanatyvsgqn 1467
CS
RF
..................................................
+ + + +++ + ++ ++++ + +++++ +++++++ + +
gi|9179507 1468 ldfsinfdenitvntaggtpqlaltigsttrqaaylsgsgtsslmyrytv 1517
CS
RF
..................................................
+++ ++++ ++ ++++++ ++ +++ + + ++ +++ + + +
gi|9179507 1518 qngdldsdgiaigtlssnggtlrdaignnanltlnsvgstaavlvdatap 1567
CS
RF
..................................................
+ ++ ++++ +++ + ++ ++ + ++++ + ++++ ++ +
gi|9179507 1568 tvtsvtsstldgsyklgdvialqvlfgevvtvtgtpqltletgtidrvvn 1617
CS
RF
..................................................
++++++++ + + ++ +++ + ++ ++++ ++ +++ +
gi|9179507 1618 yssgtgsstlifnytvqvgdvssdldyavttalalnggsikdaagndatl 1667
CS
RF
..................................................
+ +++ ++ + ++ ++ ++ +++++++++ + +++ + +++
gi|9179507 1668 tlvtpgavnslgankalvvdgvaptmisstpsddgsagyndtlqltfsep 1717
CS
RF
..................................................
+ ++ + + ++++ ++ + + ++++ + + ++ ++++
gi|9179507 1718 vlagigsvrlydasddslfetvdvanlvisgssvtvdwvgnlipthsyyv 1767
CS
RF
..................................................
+ + +++ +++ + +++++ + + ++ + ++ +++++++
gi|9179507 1768 qltagvikdsagnpfagindktslnftvthvapvamadsattdedssiai 1817
CS
RF
..................................................
+ +++ +++ ++ + + +++++++ +++++ + +++ ++++ +
gi|9179507 1818 pvlsndvssgfalnpasvlivtapsngstsinnstgvitytpnanhngad 1867
CS
RF
..................................................
+ + + + +++ ++ + + + + ++ + ++ + ++ + + + + +
gi|9179507 1868 sfsykvqdvnggqsnaasvsitinavndapvitgvpatsvnqgatysfvp 1917
CS
RF
..................................................
+ ++ + ++ + + ++++ +++++ ++++++++ +++++ + +
gi|9179507 1918 tasdvdansvlsfsivnkpswaafdtstgaltgtptrsdigstsgigisv 1967
CS
RF
..................................................
+++ + + + + ++++ + ++ + + +++++ + + + ++ +++
gi|9179507 1968 sdgilsaqlpafslevlstnsapvatnasvsldedtslsisftatdaedd 2017
CS
RF
..................................................
+ + + + +++ ++++ +++ + +++++ + ++ + +++++
gi|9179507 2018 vlsfevvtqpasgklvkhgsvwlytpdadfngddsvrfiakdaelsstpg 2067
CS
RF
..................................................
+ + ++ +++++ +++ + + +++++ + +++++ ++++ + ++
gi|9179507 2068 vvsikvnpvndepkavddnisqslstdnsytlavldndtdvdgdtltidg 2117
CS
RF
..................................................
+ ++ ++ + +++ ++ + + +++++++++ + +
gi|9179507 2118 aaadvgsvqivssqlkyqaptgfvgpvalrysisdghkgrsnakvqllit 2167
CS
RF
..................................................
++++ + + + + + + + ++ + + + + + ++++ + +++
gi|9179507 2168 gensadapvitvpaditanatglftqlklgvatavdasgkklavslvntk 2217
CS
RF
..................................................
++++ +++ +++ ++ + + ++ + +++ +++++ +
gi|9179507 2218 qlfapgehvaywqatdsqgrsaiksqkvtvkplisisrnqvvsegseakv 2267
CS
RF
..................................................
+ +++++ + + + + ++++++++++ ++ + +++ + + + +
gi|9179507 2268 svflngpspqypvsvpytvsgssdgndhdlvdgvveitsglsasfsvnvf 2317
CS
RF
..................................................
+++ ++ +++ + +++ + ++ ++++ ++ + + + + +++
gi|9179507 2318 ddgvteadeelvisldpslnlsgqretrlliteaniapqasivvtqsneq 2367
CS
RF
..................................................
++ ++ +++ + ++++ ++ ++ ++ +++ +++ +++ ++++
gi|9179507 2368 rtqvskaegkvyikvksrdvnsqdsltevwstgalvldtdadgsyfdpst 2417
CS
RF
..................................................
+ ++ + + ++++++ +++ + +++ + ++ +++++ +++
gi|9179507 2418 ldagsypislvvtddgtpqlstkvqltllvkdslpvltgadsdgdlipdn 2467
CS
RF
..................................................
++ ++++++ + + ++ + ++ ++ + ++ ++ + +++
gi|9179507 2468 qegfadtdgdgiadyldainecnvlqerassqqtflaesqsgvclrlgnt 2517
CS XXEEEXEEEE
RF xxxxxxxxxx
.......................ReavpfyFeL<-*
++ + +++ ++ ++ +f+FeL
gi|9179507 2518 aqligsqgiqvpdsalikdaladNLGGLFDFEL 2550
DUF842: domain 1 of 1, from 76 to 86: score 4.0, E = 1.5
*->PelvkrmkktL<-*
P+l++++k++L
gi|9179507 76 PHLFNQLKQNL 86
Cad: domain 1 of 1, from 111 to 117: score 0.7, E = 7.8
*->YiatalD<-*
Yi+talD
gi|9179507 111 YISTALD 117
NRPS: domain 1 of 1, from 129 to 138: score 1.0, E = 3.6
*->HravSGVeVl<-*
H+ ++G +Vl
gi|9179507 129 HAQFGGDWVL 138
Gag_p30: domain 1 of 1, from 150 to 175: score 3.1, E = 0.95
*->qYWPFsaaDlYnWKsnnPsFsedPqaLta<-*
PFsa l nW++ P F d L +
gi|9179507 150 ---PFSAPALANWQHVLPTFDGDGGSLSG 175
DUF416: domain 1 of 1, from 176 to 188: score 3.9, E = 1.1
*->aafiEaqageelt<-*
a++iEa +g+ +t
gi|9179507 176 ANYIEADNGDGIT 188
Big_1: domain 1 of 1, from 181 to 192: score 2.3, E = 2.5
CS SSSS--EEEEEE
*->AngndaiTlTAt<-*
A++ d+iT+TAt
gi|9179507 181 ADNGDGITMTAT 192
FliD_N: domain 1 of 1, from 242 to 256: score 2.3, E = 9.1
*->atsgAsaGsysikVe<-*
a+++As+G+y+++V+
gi|9179507 242 ADGTASTGNYTFTVT 256
Big_2: domain 1 of 2, from 247 to 267: score 1.7, E = 8.2
CS SSS-EEEEEEETT.TEEEEEEE
*->akGtatItatsgdgnksasvtv<-*
++G+ t t+tsg+ +++ ++t
gi|9179507 247 STGNYTFTVTSGS-GSTIVKTQ 267
CopC: domain 1 of 1, from 248 to 256: score 1.6, E = 5.1
CS EEEEEEEE-
*->tGsitFsVk<-*
tG++tF+V
gi|9179507 248 TGNYTFTVT 256
Gp5_C: domain 1 of 2, from 249 to 265: score 1.0, E = 35
CS S-EEEEES SEEEEEES
*->GnrtvtVg.GnqTtsVg<-*
Gn+t+tV +G +t V+
gi|9179507 249 GNYTFTVTsGSGSTIVK 265
Pox_I6: domain 1 of 1, from 249 to 257: score -0.7, E = 9.5
*->GkYTYRIie<-*
G+YT++++
gi|9179507 249 GNYTFTVTS 257
RNA_pol_Rpb1_3: domain 1 of 1, from 332 to 349: score 0.3, E = 6.3
CS HHHHHHHCCT.BB--GGGC
*->lgfryltksGGFSiGigDi<-*
+g++ ++ +G S G+ D+
gi|9179507 332 VGNYVSLDAG-TSLGVSDV 349
MspA: domain 1 of 1, from 357 to 376: score 1.1, E = 7.2
*->PDGwevGpglTVgakDEsav<-*
++G +G+ lT+++++++++
gi|9179507 357 GNGNYAGASLTLQRVGTAIT 376
Autotransporter: domain 1 of 1, from 447 to 531: score 3.0, E = 1.8
CS EEEEEEECT.........TEEEEEEEEEEEESS--- ------ ---
*->vrleyrfslggsialgrrslppyaglgvayefsgsr.vpvnsa.lla
+ l+y++s+g + + +a++ v + s+++++++++a+ +
gi|9179507 447 AALRYSLSDG--------TASTTADVTVTSD-SIYVtSTTDTAtINL 484
CS - --.---------EEEEEEEEEEEEECTTEEEEEEEEEE....TTEEEE
a.gslfgvasgtpldrtalslgaGlelklgsnlslflnysaefgsqlsdn
++g +f +a ++ l++t++s ++ l+ +++s +sl +n+s + +
gi|9179507 485 NnGVSFSEAVAIALADTTGSQTLILSSAFTSSMSLAGNLS----IAENLT 530
CS E
g<-*
gi|9179507 531 I 531
YaeQ: domain 1 of 1, from 459 to 486: score 3.0, E = 1.3
*->sMqLqvTIqDGqvwlsdddgsvevtpev<-*
s + vT++ +++++++ ++++ +
gi|9179507 459 STTADVTVTSDSIYVTSTTDTATINLNN 486
ADSL_C: domain 1 of 1, from 486 to 500: score 2.0, E = 7.6
CS TTGGGHHHHHHHHHH
*->gGLifSqrVlLaLae<-*
+G+ fS++V +aLa+
gi|9179507 486 NGVSFSEAVAIALAD 500
Fork_head_N: domain 1 of 1, from 556 to 560: score -1.5, E = 3.1
*->SYTHA<-*
S+THA
gi|9179507 556 SLTHA 560
Lum_binding: domain 1 of 1, from 793 to 804: score 3.1, E = 2.4
*->tGivegvaeIae<-*
+Giv g+a+ +
gi|9179507 793 SGIVSGTATLTK 804
RTX: domain 1 of 1, from 804 to 815: score 1.7, E = 0.46
*->KtdtGaLTIDgt<-*
KtdtG LT gt
gi|9179507 804 KTDTGSLTLAGT 815
Fil_haemagg: domain 1 of 3, from 824 to 859: score 4.7, E = 1.3
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-E
*->vaaGaltlnaaalggldlnnggtlsagggltltaagll<-*
v+ G+l l+ + ++++++++ ++++g++l l+a +++
gi|9179507 824 VSEGTLVLDNG--AAMADTTAVSIASGATLRLDASETI 859
Flagellin_N: domain 1 of 1, from 830 to 859: score 1.4, E = 8.7
CS TTS-...EEEEEE-SSSTT-EEEEEE---ST
*->lLdggttfknvsfqvganagetikvdlgsvs<-*
+Ld+g +++ + +v+ +g t+++d++++
gi|9179507 830 VLDNG-AAMADTTAVSIASGATLRLDASETI 859
DUF2328: domain 1 of 1, from 846 to 864: score 1.3, E = 2.7
*->eaGgtisveiteeavvlsa<-*
++G+t++++++e+ vls+
gi|9179507 846 ASGATLRLDASETIGVLSG 864
Fil_haemagg: domain 2 of 3, from 861 to 962: score 3.7, E = 2.4
CS EEESSEEEETT TT-
*->vaaGaltlnaa.................................alg
v++Ga+tl+ ++ + + +++++++ +++ ++++++ +++++++ +l+
gi|9179507 861 VLSGAGTLAMNgahltlnqtsdssfsggitgsgsnltksgssklTLS 907
CS -EE-SEEEEEE-STT-EEEE-S-EEESSE...................EE
gldlnnggtlsagggltltaagllnnggtliaggdlllaagalrnggdlt
g+++ +g t +gg l+lt+a + g+t+ +gg+l+ +++ +
gi|9179507 908 GTSTYTGVTSISGGSLSLTGALSGTTGATIGSGGTLEGTGSL------FA 951
CS EEESS-EEEEE
ltaaGdLdnsg<-*
+++++L++++
gi|9179507 952 TSSTNTLTVQS 962
Fil_haemagg: domain 3 of 3, from 969 to 1016: score 9.4, E = 0.055
CS EEESSEEEETTTT--EE-SEEEEEE-STT-EEEE-S-EEESSE....
*->vaaGaltlnaaalggldlnnggtlsagggltltaagllnnggtliag
++G +t++++ ++ t+++gg+lt++ +g+ g
gi|9179507 969 GISGPGTITIN--------GNLTIASGGALTAQITGTVLGSGY---- 1003
CS ...............EEEEESS-EEEEE
gdlllaagalrnggdltltaaGdLdnsg<-*
+++ G++d+s+
gi|9179507 1004 ---------------DSVAVNGTVDVSS 1016
Chlam_PMP: domain 1 of 4, from 975 to 993: score 10.7, E = 0.13
*->ditFsgNsaaggGGAiyas<-*
+it++gN++ ++GGA+ a+
gi|9179507 975 TITINGNLTIASGGALTAQ 993
Gp5_C: domain 2 of 2, from 975 to 995: score 4.5, E = 3
CS EEEESS-EEEEESSEEEEEES
*->sltVkGnrtvtVgGnqTtsVg<-*
++t++Gn t+ gG T ++
gi|9179507 975 TITINGNLTIASGGALTAQIT 995
Arylsulfotrans: domain 1 of 1, from 982 to 997: score -0.0, E = 5.2
*->salaiggaagakvtGt<-*
+ +a+gga+ a++tGt
gi|9179507 982 LTIASGGALTAQITGT 997
Hexokinase_1: domain 1 of 1, from 995 to 1005: score -0.1, E = 7.4
CS HHHHHHHHH-T
*->VGTlmacaYtd<-*
+GT ++++Y++
gi|9179507 995 TGTVLGSGYDS 1005
CheC: domain 1 of 1, from 1089 to 1099: score 4.5, E = 4.1
CS -EEE---EEEE
*->kidispPavvi<-*
++di+pP+v++
gi|9179507 1089 PVDITPPTVSS 1099
HYR: domain 1 of 2, from 1090 to 1100: score 3.2, E = 2.5
*->vDttPPtvenC<-*
vD+tPPtv ++
gi|9179507 1090 VDITPPTVSSV 1100
DUF11: domain 1 of 5, from 1101 to 1112: score 4.2, E = 2.9
*->dtPaGltyvsgs<-*
++Pa+ tyvsg+
gi|9179507 1101 NVPANATYVSGQ 1112
JmjC: domain 1 of 4, from 1107 to 1124: score 7.9, E = 0.082
*->ayHavfNlGfniaeavNF<-*
+y +++Nl+f+i++ N+
gi|9179507 1107 TYVSGQNLDFTINFDENI 1124
Chlam_PMP: domain 2 of 4, from 1117 to 1132: score 1.4, E = 43
*->ditFsgNsaaggGGAi<-*
+i F++N++ + GG++
gi|9179507 1117 TINFDENITVNTGGGT 1132
FG-GAP: domain 1 of 4, from 1159 to 1174: score 1.4, E = 20
CS CCSCEEEC-TTSSSSS
*->fgssvaagDlnGDGrp<-*
f +++ gD + DG++
gi|9179507 1159 FRYTIQSGDADSDGIA 1174
LysM: domain 1 of 4, from 1161 to 1167: score 1.6, E = 18
CS EE--TT-
*->YtVkkGD<-*
Yt+++GD
gi|9179507 1161 YTIQSGD 1167
DUF11: domain 2 of 5, from 1180 to 1215: score 0.2, E = 37
*->ttgatddlppnnnanatvtvtpvadlvitktvsnat<-*
t+g t + + nnan+t++ + ++ v++++v +++
gi|9179507 1180 TNGGTLRDGAGNNANLTLNSVGPTSSVLVDAVAPTV 1215
Lipoprotein_10: domain 1 of 4, from 1182 to 1201: score 0.7, E = 11
*->SGKFRdgigsnFNAaVnska<-*
+G+ Rdg+g+n N + ns
gi|9179507 1182 GGTLRDGAGNNANLTLNSVG 1201
DUF237: domain 1 of 4, from 1185 to 1198: score 0.6, E = 14
*->LRweLtsyanikLn<-*
LR+ +++an +Ln
gi|9179507 1185 LRDGAGNNANLTLN 1198
DUF11: domain 3 of 5, from 1219 to 1230: score 4.2, E = 2.9
*->dtPaGltyvsgs<-*
++Pa+ tyvsg+
gi|9179507 1219 NVPANATYVSGQ 1230
JmjC: domain 2 of 4, from 1225 to 1242: score 7.9, E = 0.082
*->ayHavfNlGfniaeavNF<-*
+y +++Nl+f+i++ N+
gi|9179507 1225 TYVSGQNLDFTINFDENI 1242
Chlam_PMP: domain 3 of 4, from 1235 to 1250: score 1.4, E = 43
*->ditFsgNsaaggGGAi<-*
+i F++N++ + GG++
gi|9179507 1235 TINFDENITVNTGGGT 1250
FG-GAP: domain 2 of 4, from 1277 to 1291: score 0.4, E = 42
CS CCSCEEEC-TTSSSS
*->fgssvaagDlnGDGr<-*
+ ++v gD + DG+
gi|9179507 1277 YRYTVQSGDADSDGI 1291
LysM: domain 2 of 4, from 1279 to 1285: score 4.1, E = 3.3
CS EE--TT-
*->YtVkkGD<-*
YtV++GD
gi|9179507 1279 YTVQSGD 1285
PhoD: domain 1 of 1, from 1279 to 1296: score 4.7, E = 0.26
*->lGVaSGDPqpdsvllWTR<-*
+V+SGD ++d+ +++++
gi|9179507 1279 YTVQSGDADSDGIVISSL 1296
OmpW: domain 1 of 1, from 1285 to 1315: score 0.5, E = 8.4
*->nasqnklkvdgiravsgskvaKNGvgndvqPgL<-*
+a+++++ +++ a g++++ G+gn++ ++L
gi|9179507 1285 DADSDGIVISSL-ASNGGTLR-DGAGNNANLTL 1315
Lipoprotein_10: domain 2 of 4, from 1300 to 1319: score 0.7, E = 11
*->SGKFRdgigsnFNAaVnska<-*
+G+ Rdg+g+n N + ns
gi|9179507 1300 GGTLRDGAGNNANLTLNSVG 1319
DUF237: domain 2 of 4, from 1303 to 1316: score 0.6, E = 14
*->LRweLtsyanikLn<-*
LR+ +++an +Ln
gi|9179507 1303 LRDGAGNNANLTLN 1316
DUF11: domain 4 of 5, from 1337 to 1348: score 6.4, E = 0.73
*->dtPaGltyvsgs<-*
++Pa++tyvsg+
gi|9179507 1337 NVPANTTYVSGQ 1348
JmjC: domain 3 of 4, from 1343 to 1360: score 7.9, E = 0.082
*->ayHavfNlGfniaeavNF<-*
+y +++Nl+f+i++ N+
gi|9179507 1343 TYVSGQNLDFTINFDENI 1360
Chlam_PMP: domain 4 of 4, from 1353 to 1368: score 1.4, E = 43
*->ditFsgNsaaggGGAi<-*
+i F++N++ + GG++
gi|9179507 1353 TINFDENITVNTGGGT 1368
FG-GAP: domain 3 of 4, from 1395 to 1410: score 1.4, E = 21
CS CCSCEEEC-TTSSSSS
*->fgssvaagDlnGDGrp<-*
+ ++v gD + DG++
gi|9179507 1395 YRYTVQNGDTDSDGIA 1410
LysM: domain 3 of 4, from 1397 to 1404: score 5.6, E = 1.2
CS EE--TT--
*->YtVkkGDT<-*
YtV+ GDT
gi|9179507 1397 YTVQNGDT 1404
Lipoprotein_10: domain 3 of 4, from 1418 to 1437: score 0.7, E = 11
*->SGKFRdgigsnFNAaVnska<-*
+G+ Rdg+g+n N + ns
gi|9179507 1418 GGTLRDGAGNNANLTLNSVG 1437
DUF237: domain 3 of 4, from 1421 to 1434: score 0.6, E = 14
*->LRweLtsyanikLn<-*
LR+ +++an +Ln
gi|9179507 1421 LRDGAGNNANLTLN 1434
Pectate_lyase: domain 1 of 1, from 1431 to 1462: score 1.0, E = 3.8
CS XXXXXXXXX....XXX--EEESS-EEE-TT-EE
*->assgvtptvPsteaaaaatvvhdtIeVkaGqvf<-*
+++ +++++s + aaa++ +++ V+a++++
gi|9179507 1431 LTLNSVGSTASVLVDAAAPSISSV-NVPANATY 1462
DUF11: domain 5 of 5, from 1455 to 1466: score 4.2, E = 2.9
*->dtPaGltyvsgs<-*
++Pa+ tyvsg+
gi|9179507 1455 NVPANATYVSGQ 1466
JmjC: domain 4 of 4, from 1461 to 1478: score 5.8, E = 0.34
*->ayHavfNlGfniaeavNF<-*
+y +++Nl+f i++ N+
gi|9179507 1461 TYVSGQNLDFSINFDENI 1478
FG-GAP: domain 4 of 4, from 1513 to 1528: score 5.2, E = 1.6
CS CCSCEEEC-TTSSSSS
*->fgssvaagDlnGDGrp<-*
+ ++v gDl+ DG++
gi|9179507 1513 YRYTVQNGDLDSDGIA 1528
LysM: domain 4 of 4, from 1515 to 1521: score 2.2, E = 11
CS EE--TT-
*->YtVkkGD<-*
YtV+ GD
gi|9179507 1515 YTVQNGD 1521
NosD: domain 1 of 2, from 1515 to 1528: score 0.0, E = 36
*->qtcvntDlDgDGIg<-*
+t n DlD+DGI+
gi|9179507 1515 YTVQNGDLDSDGIA 1528
Lipoprotein_10: domain 4 of 4, from 1536 to 1555: score 2.3, E = 4
*->SGKFRdgigsnFNAaVnska<-*
+G+ Rd+ig+n N + ns
gi|9179507 1536 GGTLRDAIGNNANLTLNSVG 1555
DUF237: domain 4 of 4, from 1539 to 1552: score 8.2, E = 0.12
*->LRweLtsyanikLn<-*
LR++++++an +Ln
gi|9179507 1539 LRDAIGNNANLTLN 1552
HYR: domain 2 of 2, from 1562 to 1575: score 0.8, E = 13
*->vDttPPtvenCPnn<-*
vD t Ptv++++++
gi|9179507 1562 VDATAPTVTSVTSS 1575
RibD_C: domain 1 of 1, from 1567 to 1579: score -0.0, E = 9.2
CS -EEEEEEEEETTS
*->PyvilkyamSLDG<-*
P+v++ + +LDG
gi|9179507 1567 PTVTSVTSSTLDG 1579
Peptidase_A4: domain 1 of 1, from 1746 to 1756: score 1.9, E = 1.3
CS EETTE.EEEEE-
*->VSGtTtVTveYV<-*
+SG++ VTv V
gi|9179507 1746 ISGSS-VTVDWV 1756
Secretin_N_2: domain 1 of 1, from 1836 to 1853: score 4.6, E = 0.75
*->amLtaPgdGryslStsta<-*
+++taP+ G+ s+ st+
gi|9179507 1836 LIVTAPSNGSTSINNSTG 1853
DUF963: domain 1 of 1, from 1843 to 1859: score 2.8, E = 9
*->nsSTpItsSsvvnsSTP<-*
n ST+I+ S+ v + TP
gi|9179507 1843 NGSTSINNSTGVITYTP 1859
DHC: domain 1 of 1, from 1863 to 1871: score 1.1, E = 7.1
*->HpgAekGnF<-*
H gA+++++
gi|9179507 1863 HNGADSFSY 1871
Tet_res_leader: domain 1 of 1, from 1872 to 1890: score 3.8, E = 5.5
*->mKCkkmnRvqLKegsvslaL<-*
K +++n q +svs+++
gi|9179507 1872 -KVQDVNGGQSNAASVSITI 1890
He_PIG: domain 1 of 2, from 1899 to 1924: score 4.5, E = 1.7
*->itGtPtptvqpG.sytftvtatdgsg<-*
itG+P+++v +G +y+f ta+d
gi|9179507 1899 ITGVPATSVNQGaTYSFVPTASDVDA 1924
He_PIG: domain 2 of 2, from 1929 to 1972: score 16.5, E = 0.00068
*->tytlTkpsdgslasysttpggggLPsGLtLdsstGritGtPtptvqp
++++ + Ps+ +d stG++tGtPt +
gi|9179507 1929 SFSI-----------------VNKPSWAAFDTSTGALTGTPTRS-DI 1957
G.sytftvtatdgsg<-*
G+++ + ++++dg
gi|9179507 1958 GsTSGIGISVSDGIL 1972
Alpha-amyl_C2: domain 1 of 1, from 1953 to 1970: score 3.5, E = 5
*->kRngIhsrSsvkIlaAda<-*
+R++I s+S + I ++d+
gi|9179507 1953 TRSDIGSTSGIGISVSDG 1970
Alpha-L-AF_C: domain 1 of 1, from 1960 to 1980: score 3.9, E = 1.4
CS SB---EEE.TT...EEEEEE-SSEE
*->ksfggakvaedvsggtltvtLPplS<-*
+s++g++v +d g l++ LP++S
gi|9179507 1960 TSGIGISV-SD---GILSAQLPAFS 1980
Peptidase_S13: domain 1 of 1, from 1964 to 1990: score -0.3, E = 8.4
CS T-EESS-EEE----TT.SSEEEEEEEEEE
*->GitVsgdiglagtpqsaparvLAvhqSaP<-*
Gi+Vs++i++a+ p+ + +++ SaP
gi|9179507 1964 GISVSDGILSAQLPAF--SLEVLSTNSAP 1990
Matrix: domain 1 of 1, from 2002 to 2035: score -0.2, E = 8.9
*->seiidlpkdswsdsgsLepfPivldskgggkgrLvpQ<-*
+ ++++++++ + + f++v+++ +g+Lv++
gi|9179507 2002 DTSLSISFTATDAEDDVLSFEVVTQP---ASGKLVKH 2035
DUF1488: domain 1 of 1, from 2006 to 2026: score 2.1, E = 8.7
*->sIlFpdrpsydaarqavrFpAqvd<-*
sI+F+ + da+++ + F ++ +
gi|9179507 2006 SISFT---ATDAEDDVLSFEVVTQ 2026
KGK: domain 1 of 1, from 2015 to 2034: score 0.7, E = 7.6
*->dDDVlsllvddFnkliiAstfK<-*
+DDVls++v + ++ +++++K
gi|9179507 2015 EDDVLSFEVVT--QPASGKLVK 2034
SH2: domain 1 of 1, from 2089 to 2105: score 1.9, E = 4.3
CS ETSSSTTEEEEEEEETT
*->eSestpGdYtLSVrddg<-*
+S st ++YtL V+d++
gi|9179507 2089 QSLSTDNSYTLAVLDND 2105
TPP_enzyme_C: domain 1 of 1, from 2121 to 2141: score 2.1, E = 2.3
CS ESTHHHHHHHHH.H.SSSSTSEEE
*->DvGqhqmWaaqyqlyrfnrprrfl<-*
DvG+ q+ + q+ +++ p +f+
gi|9179507 2121 DVGSVQIVSSQL---KYQAPTGFV 2141
NAD_binding_4: domain 1 of 1, from 2179 to 2188: score -0.1, E = 3.4
*->vPVDyVanai<-*
vP+D ana+
gi|9179507 2179 VPADITANAT 2188
Alum_res: domain 1 of 1, from 2191 to 2206: score -0.1, E = 4.5
*->yeHVKiAvlaAldall<-*
+++ K++v +A+da +
gi|9179507 2191 FTQLKLGVATAVDASG 2206
Calx-beta: domain 1 of 1, from 2312 to 2333: score 2.7, E = 4.9
*->invtiiDDdvyEgdEnFfvrLs<-*
++v++ DD v E dE ++ L+
gi|9179507 2312 FSVNVFDDGVTEADEELVISLD 2333
UBX: domain 1 of 1, from 2348 to 2363: score 3.4, E = 3.2
CS CHHHTTTTCCEEEEEE
*->Lkeagllpnstlvlep<-*
+ ea++ p++++v+++
gi|9179507 2348 ITEANIAPQASIVVTQ 2363
Fimbrial_CS1: domain 1 of 1, from 2358 to 2364: score 0.8, E = 3.9
*->SIvlTQs<-*
SIv+TQs
gi|9179507 2358 SIVVTQS 2364
Big_2: domain 2 of 2, from 2373 to 2395: score 7.4, E = 0.18
CS -SSS-EEEEEEETT.TEEEEEEE
*->lakGtatItatsgdgnksasvtv<-*
+a+G+++I+++s d+n++ s+t
gi|9179507 2373 KAEGKVYIKVKSRDVNSQDSLTE 2395
NEAT: domain 1 of 1, from 2414 to 2438: score 3.9, E = 1.8
*->asnnLadGtYtIdfkvlKdntdeeS<-*
++++L G+Y+I +v d+t S
gi|9179507 2414 DPSTLDAGSYPISLVVTDDGTPQLS 2438
Cadherin: domain 1 of 1, from 2418 to 2448: score 11.1, E = 0.018
CS --S.....S-B--EEE----.........S---EEEE--EEE-
*->LDREeifngeYeLtveAtDadpllasgggpplsstatvtitVl<-*
LD g Y +++++tD g+p ls+ +++t V
gi|9179507 2418 LDA-----GSYPISLVVTDD-------GTPQLSTKVQLTLLVK 2448
TSP_3: domain 1 of 2, from 2457 to 2469: score 2.6, E = 14
CS --TT-SSS-..GGGS
*->eDsDnDgvgdnDaCd<-*
+DsD+D + D +
gi|9179507 2457 ADSDGDLIP--DNQE 2469
Mog1: domain 1 of 1, from 2464 to 2474: score 0.8, E = 6.6
*->iPDNQEVFlhd<-*
iPDNQE F+ +
gi|9179507 2464 IPDNQEGFADT 2474
Binary_toxB: domain 1 of 1, from 2471 to 2483: score 0.0, E = 4.5
*->dlDtDnDgIPDlw<-*
DtD+DgI D +
gi|9179507 2471 FADTDGDGIADYL 2483
NosD: domain 2 of 2, from 2471 to 2481: score 3.8, E = 3.4
*->ntDlDgDGIgD<-*
+ D+DgDGI+D
gi|9179507 2471 FADTDGDGIAD 2481
TSP_3: domain 2 of 2, from 2472 to 2487: score 6.8, E = 0.76
CS --TT-SSS-.. GGGS
*->eDsDnDgvgdn.DaCd<-*
+D+D+Dg+ d Da +
gi|9179507 2472 ADTDGDGIADYlDAIN 2487
MucB_RseB: domain 1 of 1, from 2473 to 2502: score 0.6, E = 5.2
*->nvndrlaeledyLekvalPpPvsvlkvpkeetkadv<-*
+++ + +++dyL +++++ vl++ + ++++
gi|9179507 2473 DTD--GDGIADYLDAINECN---VLQERASS-QQTF 2502
Chal_sti_synt_C: domain 1 of 1, from 2494 to 2514: score 0.6, E = 8.7
CS EEEEEEEEE-TT-GGGEEEEE
*->elvsaaQtllPdsegaidghl<-*
e s++Qt+l++s++ ++++l
gi|9179507 2494 ERASSQQTFLAESQSGVCLRL 2514
DUF690: domain 1 of 1, from 2550 to 2574: score -0.0, E = 3.8
*->lvaPptvvPdvvvklPvvnrLdvsa<-*
l+a p+++++v v++P+++ +++ a
gi|9179507 2550 LTAIPRLGASVAVVIPQARPVPTNA 2574
7TM_GPCR_Sri: domain 1 of 1, from 2572 to 2582: score 2.5, E = 1.4
*->TtPpYRkfllr<-*
T++ YRkf++
gi|9179507 2572 TNAVYRKFVRG 2582
Disintegrin: domain 1 of 1, from 2600 to 2611: score 4.6, E = 0.62
*->GtSaeCPpdpyv<-*
G+S++CPp++ +
gi|9179507 2600 GNSGYCPPPGAA 2611
DUF74: domain 1 of 1, from 2701 to 2707: score 1.4, E = 7.1
*->GTAVvve<-*
GTAVv+
gi|9179507 2701 GTAVVLD 2707
Abi: domain 1 of 1, from 2851 to 2863: score 2.0, E = 5.7
*->vHalnNligfill<-*
vH+l+ +++++ l
gi|9179507 2851 VHWLWSSMLLLSL 2863
Tmemb_170: domain 1 of 1, from 2877 to 2899: score 5.2, E = 1.2
*->lAfvtLrkHKygRfCfsIfilvMGv<-*
lA++ L HK ++f s ++l++Gv
gi|9179507 2877 LALFKLAQHKNACF--SALVLLLGV 2899
DUF2388: domain 1 of 1, from 2888 to 2904: score 1.9, E = 6.1
*->llaallLllapaasAsA<-*
+++++l ll++++sA+A
gi|9179507 2888 ACFSALVLLLGVGSAQA 2904
Bac_surface_Ag: domain 1 of 1, from 2908 to 2966: score -0.0, E = 8.3
*->gdrlslgtslfaqhfn........assedeydsydikssgfslslgy
+++++l+ +l+++ +++++ + +++ ++ + +d + +g++lslgy
gi|9179507 2908 NSPWYLDANLSVNETDktqmelqqEVTAGTISGFDNSDTGVGLSLGY 2954
rtllllskqpnwtvtvgl<-*
+ ++ p + +g+
gi|9179507 2955 Q----VT--PLLAFELGY 2966
SMP_2: domain 1 of 1, from 2908 to 2925: score 0.4, E = 8.7
*->qspylLtakkpvkeeges<-*
+sp+ L a+ +v e++++
gi|9179507 2908 NSPWYLDANLSVNETDKT 2925
Tenui_NCP: domain 1 of 1, from 2927 to 2942: score 0.2, E = 6.2
*->skrksdVsVGpisGLn<-*
++++ +V G+isG +
gi|9179507 2927 MELQQEVTAGTISGFD 2942
OmpA_membrane: domain 1 of 1, from 2940 to 2970: score 15.4, E = 0.00092
CS --SSSEEEEEEEEEEEEETT....EEEEEEEEEEE
*->gthrnsltaGaFgGYQinnyNklGLalELGYDYlG<-*
g + ++++G+ +GYQ+ + La+ELGY++lG
gi|9179507 2940 GFDNSDTGVGLSLGYQVTPL----LAFELGYLDLG 2970
BCSC_C: domain 1 of 1, from 2942 to 2955: score -0.2, E = 8.5
*->sQsasGValavGye<-*
+ s++GV+l++Gy+
gi|9179507 2942 DNSDTGVGLSLGYQ 2955
DUF796: domain 1 of 1, from 2966 to 2984: score 1.6, E = 7.4
*->YLkIsdGekQGlIkaGCsTDSIGesqdag<-*
YL + Ge+ I+ Ges+dag
gi|9179507 2966 YLDL--GEGSAQIS--------GESLDAG 2984
Cyc-maltodext_N: domain 1 of 1, from 3042 to 3052: score 3.8, E = 0.94
CS EEESS-EETT-
*->KiEPpFWWaGM<-*
K++ ++W+aGM
gi|9179507 3042 KLDDTDWYAGM 3052
DUF479: domain 1 of 1, from 3054 to 3063: score 3.3, E = 2
*->yDHFLArhWn<-*
+D+ LA+hW+
gi|9179507 3054 FDYALAQHWS 3063
HutP: domain 1 of 1, from 3061 to 3071: score 4.7, E = 0.88
CS EEEEEEEEE-X
*->HEriGLGinHi<-*
H +GLGin++
gi|9179507 3061 HWSMGLGINYY 3071
//