A6NDA9  LRIT2_HUMAN

Gene name: LRIT2   Description: Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2

Length: 550    GTS: 2.914e-06   GTS percentile: 0.890     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 5      gnomAD_SAV: 385      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASVFHYFLLVLVFLDTHAAQPFCLPGCTCSEESFGRTLQCTSVSLGKIPGNLSEEFKQVRIENSPLFEMPQGSFINMSTLEYLWLNFNNISVIHLGALE 100
BenignSAV:                                Y                                                                        
gnomAD_SAV:       I R#S  D AS VIRT #SC*##AYPF VG   K   Y  L#SE F   FF GYEPA  KS L S  L AP TDTN   C   D  S    YIEV  
Conservation:  2101000211122200101212072148372252267452932124214513441332447674535374323371111152377767536455414482
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:     HHHHHHHHHHHHHHHHHH          EE      EEE                  EEE                     EEE       EE      
SS_SPIDER3:      HHHHHHHHHH HH HHHH        EEE     EEEEE                EEEE       E    H        EEEE   E  E       
SS_PSSPRED:     HHHHHHHHHHHHHH             EEE     EEEEE                EEEEE                    EEEE    EEEE  HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD                                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                         N                                                

                       10        20        30        40        50        60        70        80        90     
AA:            HLPELRELRLEGNKLCSVPWTAFRATPLLRVLDLKRNKIDALPELALQFLVSLTYLDLSSNRLTVVSKSVFLNWPAYQKCRQPDCGAEILSSLVVALHDN 200
BenignSAV:                                                                                   N                     
gnomAD_SAV:    Q  DV V S   K    E   V HTNA P  W   CD T#TF A TF Y L# I  E  FSTVI IP     KC T *N W A# RPQFF R M      
Conservation:  3711838766575582556855932440735757637258377627643722957885848373656236913642232011010111003335657546
SS_PSIPRED:          EEE          HHHH       EEE            HHH      EEE       EE HHHHH  HHHHH              EEE    
SS_SPIDER3:          EEE    E EE  HHHHH      EEE    EH E   HHHH      EEE    EEEEE HHHH   HHHHH             EEEEE   
SS_PSSPRED:    HHHHHHHHHH         HHHHH       EE         HHHHHHH     EEE       EE HHHH   HHHHHH            EEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PWVCDCRLRGLVQFVKSITLPVILVNSYLICQGPLSKAGQLFHETELSACMKPQISTPSANITIRAGQNVTLRCLAQASPSPSIAWTYPLSMWREFDVLT 300
BenignSAV:                        F                                                                                
gnomAD_SAV:    S IY  S TEPA*  T   FS    KF*QL  #L C  RPVLQG AF DF     *A#C#    QE#K    #    VI# S  SCA L T   VY A S
Conservation:  4817786944543542232373494748827237023244475533522824803532035463127153481824255815251826254136362321
SS_PSIPRED:         EEEHHHHHHHHH    EEE          HHH                EEE     EEE     EEEEEEEEEE   EEEEE        EEE  
SS_SPIDER3:          HHHHHHHHHH     E       EE   HHH   E  H         EEE     EEEE   EEEEEEEE E    EEEEEE   EEEEEE   
SS_PSSPRED:          HHHHHHHHHH     EEEE         HHH     EEE         E      EEEE   EEEEEEEEEE    EEEEEE     E      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                               C                          

                       10        20        30        40        50        60        70        80        90     
AA:            SSTGEDTALSELAIPAAHLVDSGNYTCMASNSIGKSNLVISLHVQPAQALHAPDSLSIPSEGNAYIDLRVVKQTVHGILLEWLAVADTSKEEWFTLYIAS 400
gnomAD_SAV:    F I  E D  QP L PD P  #A  # LV T TVE       Q   TP  R      N#WDDD   # WDI#K A   W V* T   N R*KCI   VVL
Conservation:  1122362307153455321142516371427347333203051502001102121121212123253335246643663557332211415265442321
SS_PSIPRED:        EE    EEEE    HHH EEEEEEEE    EEEEEEEEEE                    EEEEEEEE     EEEEEE        EEEEEEEE 
SS_SPIDER3:        E    EEEEE    HHH EEEEEEEE    EEEEEEEEEE                    EEE  EEEE      EEEE       EEEEEEEEE 
SS_PSSPRED:              EEEEE       EEEEEEEEE    EEEEEEEE                        EEEEEEE     EEE          EEEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                C                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            DEAFRKEVVHIGPGINTYAVDDLLPGTKYEACLSLEGQPPHQGQCVAFVTGRDAGGLEAREHLLHVTVVLCVVLLAVPVGAYAWAAQGPCSCSKWVLRGC 500
BenignSAV:                                                                                                    A    
gnomAD_SAV:     QG     A TRRR SS  A#GF  DK # DY   Q  LA  D SAP     AV  VQTCAY  RIAA MRAL     MVV V  T SA*    *AVC  
Conservation:  1210143132353741232223525347854654531314204474364573202243145234442442233352243523233332221302120001
STMI:                                                                           MMMMMMMMMMMMMMMMMMMMM              
SS_PSIPRED:         EEEEEE     EEEE       EEEEEEE          EEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHH    HH   
SS_SPIDER3:        EEEEEE      EEEEE      EEEEEEEE         EEEEE         HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   E         
SS_PSSPRED:            EE     EEEEE       EEEEEEE          EEEEEE           HHHHHHHHHHHHHHHHHHHHHHHHHH             
DO_DISOPRED3:                                                                                                   DDD
DO_SPOTD:                                                             DDDDDDDDDDDDDD                        DDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50
AA:            LHRRKAPSCTPAAPQSKDGSFREHPAVCDDGEGHIDTEGDKEKGGTEDNS 550
BenignSAV:              P                                        
gnomAD_SAV:      #G GS  PA  LP  NDYYIKYS I G RQEP #A*#   I EM E# 
Conservation:  10011011011000001101222211313311212100102101101101
SS_PSIPRED:                                                      
SS_SPIDER3:                                                      
SS_PSSPRED:                                                      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:              DDDDDD  DDDDD   DDDDDDDDDDDDDDDDDDDDDDD