A6NKG5  RTL1_HUMAN

Gene name: RTL1   Description: Retrotransposon-like protein 1

Length: 1358    GTS: 1.105e-06   GTS percentile: 0.270     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 10      gnomAD_SAV: 643      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MIEPSEDSFETMMEHKNPSSKQMESSEGSSNTTEATSGSGVRGEAGPASGPAQEKKEPPSGPLQEMEELPTDLLQDMEEPSSGPRKEIEDPPNDLLQDLE 100
BenignSAV:                                           R                                                             
gnomAD_SAV:       L  VA  M  D#   LLR     K      KV#LSREGQ  V   NSLT   ED R C  R IK  A   P G       TGTK       PF  RK
Conservation:  9111221311121212111101112011311130312110000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:            HHHHHH     HHH                                        HHHHH   HHHHH                  HHHHHHH
SS_SPIDER3:            HHHHH                                                 HHHH    HHH                     HHHHHH
SS_PSSPRED:            HHHHH                                                    HHH  HHHHH                  HHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            ESCNGSHQARGDPLSGASDRMKEASVNPSGAREEQEAHTDLKESGREETPQEQNQTEHSTAELMAMVRSIISLYFRMQDLKEQQRVAEEILIKGINAGQL 200
gnomAD_SAV:      G S  R   # P A   TL  S   SL  P Q K  AN       K   Q TR GN AT  #T MT   L               K            
Conservation:  0000000000000000000000000000000000000000000000000200000000000000101011120001323200000101131112110001
SS_PSIPRED:    HHHH               HH            HHHH   HHH      HHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         
SS_SPIDER3:    H                                HHH                       HHHHHHHHHHHHH HHH HHHHHHHHHHHHHH         
SS_PSSPRED:    HHH                                                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDD   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D    
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                      

                       10        20        30        40        50        60        70        80        90     
AA:            PAPKHFSGDRREFHEFIVLCQLTLQSYPRMFYNDRLRVGYVINHLSGLALEWAKALLQENSPLIGDFPAFLEAMSEVFEYRQALRVAEEAMFTIRQGGRS 300
gnomAD_SAV:    LT       C   LK LI RH     *     SNH I DCG S   S    R   P    #T VR   V   S PKL  *#   #  K   L     SH 
Conservation:  2042131222101123312211131012003012112312222021110013322211104122122230302211042131111042102126133112
SS_PSIPRED:             HHHHHHHHHHHHHHHHH       HHHHHHHHHHHH  HHHHHHHHHHHH       HHHHHHHHHHH   HHHHHHHHHHHHHH      
SS_SPIDER3:             HHHHHHHHHHHHHHHHH       HHHHHHHHHH    HHHHHHHHHHH        HHHHHHHHHHH   HHHHHHHHHHHHH       
SS_PSSPRED:             HHHHHHHHHHHHHHHHH       HHHHHHHHHHH   HHHHHHHHHHHH       HHHHHHHHHHH   HHHHHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    D  D                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            ATEYIDEFQSLVPILGWPDEVLQAHLCQGLNEEIRHYLFRVPQPDSLDSLIVLILQIEEKLAERRAMLRLPPEARPRNLTWIDSPAPERWMVSSWLPSEV 400
BenignSAV:                                                                                                       K 
gnomAD_SAV:         AK  N   N    G     R      K   L P    E   P         M K  ED T    P#RDTC #DPIG H     M     S ARK 
Conservation:  2021321321532052224103011312251302223210020213313452434135122121021241312203000000000000000000000000
SS_PSIPRED:    HHHHHHHHHHHHHHH   HHHHHHHHH    HHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHH                                
SS_SPIDER3:    HHHHHHHHHHHHHH     HHHHHHHH    HHHHHHH        HHHHHHHHHHHHHHHHHHHH                                  
SS_PSSPRED:    HHHHHHHHHHHHHHH    HHHHHHHHH   HHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHH   HHH                          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                          DDDDDDDDDD                      
DO_IUPRED2A:                                                                                 D                     

                       10        20        30        40        50        60        70        80        90     
AA:            HPDINRAHLFLLLMVRVNPYHSVAVQALVDSGADGNFMDEKFAQEHYVELYEKPYPQPVQSVDGSLIGNEPVWLYTEPLVCIHQNHQESIEFDIVPSPNF 500
BenignSAV:     R                                                                                                   
gnomAD_SAV:    RLE SHT #  M   KAKL R I#I # A     C  ##  L  #  L  *K R A L  YMYS QTD *S  #       T        K     P S 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:       HHHHHHHHHH          EEEEEE          HHHHHHH  EEEE     EEEE          EEEEE  EEEEE  EEEEEEEEEE     
SS_SPIDER3:         HHHHHHHHH         EEEEEE       E  HHHHHH   EEEE    EEEE       E  EEEEEE  EEEEE  EEEEEEEEE      
SS_PSSPRED:        HHHHHHHHHH          EEEEE          HHHHHHH   EE       EE          EEEEEEEEEEEEE   EEEEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SVVLGIRWLRVHAPEVDWIKGRCTFHSPYCLKNCFRPPPPCIALERHGMSLLPGLPHPYSDLADVFNPKEADDETSDQPSSDGSDDLSESEPSELQQAGD 600
gnomAD_SAV:      I  NC     VLK N    C*I N    P    CSTL  T# G  S     #V NT     H LK#  V      H                      
Conservation:  0000000000000000000000000000000000000000000000000000000000000212011230332121012111111010122212202002
SS_PSIPRED:     EEE  HHHHHH  EE     EEEE                   HH                      HH                      HHHHHHHH
SS_SPIDER3:     EEE HHHHHH   EEE    EEEEE      EE        H HE             H  HH      H                 HHHHHHHHHHHH
SS_PSSPRED:    EEEE HHHHHHH   E      EE                  HHHHH             HHH                          HHHHHHHHHHH
DO_DISOPRED3:                                          DDDDDDDDDDD                                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SDHSETFYECPSTAPWEPVGARMQERARLQEEYWDLQDMLTNRQDYIQMIPELFDQLHGAEWFTKLELRGTIVEESVNGHRTEDVWKAAFGLELEEMKSY 700
gnomAD_SAV:       # #  KRS  #L Q L  # * GDK R          I  * HT   L  C L  R Q  R    H  T    M   # K     E      QI N 
Conservation:  2222221133221300000000000000000000000000000000000000000000021102113101121222210002122210110100010001
SS_PSIPRED:    HHHH                      EEEEHHHHHHHHH          HHHHHHHH   EEEEEEHHH  EEEEE          HH EE      EEE
SS_SPIDER3:    H      EE          E      EEEE   HHHHHHH          HHHHHHH   EEE EEHE  EEEEEEE        EEHEEE     EEEE
SS_PSSPRED:    HHHH                     HHHHHHHHHHHHHH         HHHHHHHHHH  EEEEEHHH    EEEE        HHHHHH          
DO_DISOPRED3:  D   DDDDDDDDDDDDDDDDDDDDD                                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDD       DDDDDD                                                  D                          

                       10        20        30        40        50        60        70        80        90     
AA:            QPFALSPDPIIPQNVIHFILKDMLGFFVLSYGQEVLIYSMSQEEHLHHVRQVLVRFRHHNVYCSLDKSQFHRQTVEFLGFVVTPKGVKLNKNVMTIITGY 800
gnomAD_SAV:     L T F  R V  KG      E  R S       I       Q      L    CLC  # H C G        M  M   I HN   Q N I  VVIV 
Conservation:  0222000031012133113414212001223000000000003121100025312000328463235515222243444327222562334255248333
SS_PSIPRED:    E        HHHHHHHHHHHHHHH  EEEEEEEEEEE    HHHHHHHHHHHHHHHHH               EEEEEEEEE    EE  HHHHHHHH  
SS_SPIDER3:     E       HHHHHHHHHHHHHHH  EEEEEE  EEEE   HHHHHHHHHHHHHHHHH   EE     EE   EEEEEEEEEE  EEE  HHHHHHHH  
SS_PSSPRED:               HHHHHHHHHHHHH  EEEEEEEEEEE    HHHHHHHHHHHHHHHHHH EEEE          EEE  EEE    EEE HHHHHHHH  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PTPGSKLSLRNFIEFVFPYRHFVERFSIIAEPLVRQLLSSYQFYWGVEEQEAFECLKRAFRKAPLLHHPKPQNPFYLETGVTGTALHASLIQIDDQTGKR 900
BenignSAV:                                                    Q                                                    
gnomAD_SAV:       R     * YM CIL#HH VM C  T T S  W V    ELS   Q  DT QY  #  C V   # S    #    N   #    T    #NG  S K
Conservation:  4000000000000000000538331450043600048010000000000000011000000000000000000000000000000000000000000000
SS_PSIPRED:         HHHHHHHHHH  HHHHHH  HHHHHHHHHHHH         HHHHHHHHHHHHHHHH            EEEEE      HHHEEEEE      E
SS_SPIDER3:         HHHHHHHHH HHHHHH HHHHHHHHHHHHHHH         HHHHHHHHHHHHHH    EEE       EEEEEE     EEEEEEEEE     E
SS_PSSPRED:         HHHHHHHHHHH      HHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHH           EEEEE   HHHHHHHHH        E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ACCAFYSRNISPIEVEYSQAEMKILPIRAAFMVWCRYLENTEEPIMILLNTEDLASLNNDRLTVLLPGHWVFFFSHFNFDVMELPEQDGGRALPPVRNLR 1000
BenignSAV:                                                                                              S          
gnomAD_SAV:    GY T   CD   V# D T G #    T STLV  RH     K  F     S     P     AI      I  L   K  LV  Q    SQT  SLKKPQ
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:    EEEEEEE    HHHH   HHHHHHHHHHHHHHHHHHHH      EEEEE    HHHHH        HHHHHHHHH   EEEEE             HHHH
SS_SPIDER3:    EEEEEE     HHHH   HHHHHHHHHHHHHHHHHHH       EEEE   H HHHHH      HHHHHHHHHH     EEEE       E       H 
SS_PSSPRED:    EEEEHHHH        HHHHHHHHHHHHHHHHHHHHHHH     EEEEE     HHHH         HHHHHHHHH   EEEE                H
DO_DISOPRED3:                                                                                                DDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            WRRAFQRNTAARQTLLLASRGFPRDPSTESGEEENEEQDELNEQILRQELLAMIPIDQILNSFLAHFSMAQIRAVILHFFRGLLYWKNTLALAAILVLLR 1100
gnomAD_SAV:    R K   MK  T  NQP G KRL SN#LM  R    K    F   L Q         N  FS   TY  IT   TI     #SF  *             #
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
STMI:                                                                                            MMMMMMMMMMMMMMMMM 
SS_PSIPRED:    HHHHHH   HHHHHHHHHH             HHHHHHHHHHHH  HHHHHEE   HHHHHHH     HHH HHHHHHHHHHHHHHHHHHHHHHHHHHH 
SS_SPIDER3:    HHHHH H  HHHHHHHHHH             HHHH HHHHHHHHH  H E E    HHHHH E       HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHH    HHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH 
DO_DISOPRED3:  DDDDDDDDD                    DD                                                                     
DO_SPOTD:                             DDDDDDDDDDDDDDDDDDDD                                                         
DO_IUPRED2A:                            DDDDDDDDDDDDDDD                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            VRQCLSLRPAPAMRVARPQPQRSLRLILDSSLIAGSSITTAITQLLTQMPALVGANTIPAQELAELFLGPGRWQRNALHSQAHRGLQFTPGFWLTLCEFF 1200
BenignSAV:     L            W       C                              I                                               
gnomAD_SAV:    MS S W WL  T#Q  WS A S  P   VL   T    MRTVN   N  ST I    V  *   K    L C* * P RPP #Q  P  S   MM  GL 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
STMI:                                   MMMMMMMMMMMMMMMMMMMMM                                                      
SS_PSIPRED:                          EEEEEE         EEEEEEE               HHHHHHHH    EE                HHHHHHHHHHH
SS_SPIDER3:                           EEEE          EEEEEE       EEEE     HHHHHHHH   EE        E        HHHHHHHHHH 
SS_PSSPRED:    HH                     EEEE          EEEEEE       EEE      HHHHHHHHH    E                HHHHHHHHHHH
DO_DISOPRED3:        DDD  D                                                                                        
DO_SPOTD:             DDDDDDD                                                                                      
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GVRVTPQEGHLPALRQNRYLELHVVGDEDVVLREALQDDLQRYRQCGLHDGLQDTSQDKQDNDVQEAPPSHTAATHPPRPRHLMDPQVLEFLGSRLLHIH 1300
BenignSAV:                   H                                                                                     
gnomAD_SAV:    S   ISPG Y   MC* C     IIC D  I #KTV  V  # HP    NS *  LKN E  NM KT     V  YRTH H        G FANC   M 
Conservation:  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:                      EEEEEEE  HHHHHHHHHHHHHHHHHH           HHHH                         HHHHHHHHHH  EEE
SS_SPIDER3:      EE              EEEEEE   HHHHHHHHHHHHHHHHHH             H                          HHHHHHHH   EEEE
SS_PSSPRED:                       EEEEE  HHHHHHHHHHHHHHHHHHHH                                       HHHHHHHHH   EEE
DO_DISOPRED3:                                                                DDDDDDDDDDDDDDDDD                     
DO_SPOTD:                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDD                     
DO_IUPRED2A:                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD               

                       10        20        30        40        50        
AA:            SADGQLHLLSREQAARALSQFLTLIYRRALPIPAWESQPREQARLEELPDEDEDANLD 1358
gnomAD_SAV:          Q # Q    K PG L IV  GQD   LT  T*  K T  K  S   K    N
Conservation:  0000000000000000000000000000000000000000000000000000000000
SS_PSIPRED:              HHHHHHHHHHHHHHHHH                               
SS_SPIDER3:         E    HHHHHHHHHHHHHHHHH                 HH            
SS_PSSPRED:              HHHHHHHHHHHHHHHHHH                              
DO_DISOPRED3:                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                       DDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:            D                         DDDDDDDDDDDDDDDDDDDDDDD