O00469  PLOD2_HUMAN

Gene name: PLOD2   Description: Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2

Length: 737    GTS: 2.204e-06   GTS percentile: 0.724     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 6      BenignSAV: 8      gnomAD_SAV: 363      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGGCTVKPQLLLLALVLHPWNPCLGADSEKPSSIPTDKLLVITVATKESDGFHRFMQSAKYFNYTVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHY 100
BenignSAV:        S                                                                                                
gnomAD_SAV:    #R S       F  V FYLC    AS L T      G    VIA # Q E   Q I * R  K IM  F  E  C D N  SGS R#R  S I   # R 
Conservation:  2222222222222000000202222222220001003376648596233575065225322555345439243171421110226475644634134113
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSS                                                                           
SS_PSIPRED:           HHHHHHHHHH    HH                EEEEEE    HHHHHHHHHHHH   EEEE                  HHHHHHHHHHHHH 
SS_SPIDER3:           HHHHHHHHHH                  HH EEEEEEE     HHHHHHHHHHH   EEEE                  HHHHHHHHHHHHH 
SS_PSSPRED:           HHHHHHHHHHH                    EEEEEE      HHHHHHHHHHHH  EEEEE                  HHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                   
DO_SPOTD:      DDDD D DDDDDDDD   DDDDDDDDDDDD                                                                      
DO_IUPRED2A:                              D                                                                        
CARBOHYD:                                                                    N                                     

                       10        20        30        40        50        60        70        80        90     
AA:            ADQDDLVVMFTECFDVIFAGGPEEVLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIGKRYLNSGGFIGYAPYVNRIVQQWNLQDNDDDQLFYTKVYI 200
BenignSAV:                                                                                  C                      
gnomAD_SAV:     E G   IL  G INIVC   SGD  EICP   R L#   Y   CLH      CH  RT  H P *  VV C   #SCV  RR    DVV #  CA# D 
Conservation:  2132426653445544555646174717713223345746523458422631367041196768465666943315125521722153476766662465
SS_PSIPRED:         EEEEEE    EEE   HHHHHHHHHH    EEEE        HHHHHH               EEEEHHHHHHHHHH         HHHHHHHHH
SS_SPIDER3:         EEEEEE     EE   HHHHHHHHHH    EEEEE   E   HHHHHH             EEEEEEHHHHHHHHHH          HHEHHHHH
SS_PSSPRED:         EEEEEEE   EEE   HHHHHHHHHHH  EEEEE        HHHHHH              EEEE HHHHHHHHHH           EEEHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DPLKREAINITLDHKCKIFQTLNGAVDEVVLKFENGKARAKNTFYETLPVAINGNGPTKILLNYFGNYVPNSWTQDNGCTLCEFDTVDLSAVDVHPNVSI 300
BenignSAV:                                                                         I            R                  
gnomAD_SAV:    #L  M  TT    QQ  V         DI VT   D D V  A        V# I  IN F D  VSCISSL P  D    R LH IH FVIVAY    V
Conservation:  6212511345487345258747397354525484123584473355578536687446542477778866228422168117103111411101270414
SS_PSIPRED:     HHHHHH   EE     EEEE      EEEEEEE  EEEEEE       EEEE    HHHHHH                                  EEE
SS_SPIDER3:     HHHHHH   EE     EEEE    E EEEEEEE  EEEEEE      EEEEE    HHEHHH                EE         H      EEE
SS_PSSPRED:     HHHHH   EEE     EEE       EEEEEEE   EEEEEE      EEEE     EHHHHHH               E                 EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:              N                                                                                       N   

                       10        20        30        40        50        60        70        80        90     
AA:            GVFIEQPTPFLPRFLDILLTLDYPKEALKLFIHNKEVYHEKDIKVFFDKAKHEIKTIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYFSVDADVVLTNP 400
BenignSAV:                                                                          K     L              L         
gnomAD_SAV:         R S   #Q  YVF   N L    T     T       V  V Y VER    VTR R       VK   T L   L     NH LTL  #I F D 
Conservation:  5476464488422661261141751213144345251372134104212320141132244752141122573352317523118357774634444251
SS_PSIPRED:    EEEEE     HHHHHHHHH     HHHEEEEEE      HHHHHHHHHHH       EEE       HHHHHHHHHHHHHH     EEEEE        H
SS_SPIDER3:    EEEE      HHHHHHHHH      HHEEEEE       HHHHHHHHHH         EE       HHHHHHHHHHHHHH     EEEEE        H
SS_PSSPRED:    EEEEE    HHHHHHHHHHH    HHHHHEEEE     HHHHHHHHHHHHH       EE   H HHHHHHHHH  HHHH      EEEEEE  EEE  H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                         T  Y                                                                             
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            RTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREM 500
PathogenicSAV:                           S                          V                                              
gnomAD_SAV:          V  K   V #F SHR  P  D       G C  G   DMAL     GV  DAS   KM V     F#  V Q    IHGRP  NT H Q     
Conservation:  1343284535524546434502468756784642456777667835653326264787985334555371386135010227011125264436121522
SS_PSIPRED:    HHHHHHHH    EEE                      EE       HH  EEEEEE    EEEEEEEEHHHHHHHH            HHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHH    EEE  E             E     EE  H  EEHH  EEEEEEE   EEEEEEE HHHHHHHH            HHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHH    E                                    EEEEEE    EEEEEEE HHHHHHHHHHH         HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRIS 600
PathogenicSAV:                                                                                                  H  
gnomAD_SAV:    V#L     GYK  K  C     I  H S F RV    M   D              T   T        #   N WE F V T*R     RA  #N HV 
Conservation:  2345554733168546432273425444647455254256443654144313421112338978758874443247444533462361862514241552
SS_PSIPRED:     EEEEEE HHEEE                EEHHHH    HHHH     HHHHHH           EEE    HHHHHHHHHHHHHHHHH           
SS_SPIDER3:      EEEEE   EE EE              EEEEE      HHH     HHHHH           EEEEEEE HHHHHHHHHHHHHHHH            
SS_PSSPRED:      EEEEEE                     HHHHH     HHH     HHHHH             EEEEE  HHHHHHHHHHHHHHHH            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                      D
CARBOHYD:                           N                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            GGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIE 700
PathogenicSAV: V      I                    S                                                                       
BenignSAV:     C                                                                                                   
gnomAD_SAV:    C  K A A H  VE  Y  S     TW L VRA R   GDC M A TP          Q C  H Y    A    ST   L K    D WR    #  V 
Conservation:  7846456655474374245237344622444445425556424341415575565432353252753344443344443223054455634424334141
SS_PSIPRED:                HHH  HHHHHHHHHHHHHHHHHHHH         EEEEEEEEE               EEEEEEE             EE     EEE
SS_SPIDER3:               EH     HHHHHHHHHH  HHHHHHH        EEEEEEEEE            E    EEEEEEE           EEE  E  EEE
SS_PSSPRED:                     HHHHHHHHHHHHHHHHHHHH          EEEEEEE                 EEEEEE            EEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                          H D                                
CARBOHYD:                                                                                                     N    

                       10        20        30       
AA:            SPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP 737
gnomAD_SAV:      Q  #              V IE  A  V#   M  
Conservation:  3653354434643456455656322545653546443
SS_PSIPRED:        EEEEEE     EE         EEEEEEEEE  
SS_SPIDER3:      EEEEEEEE      E         EEEEEEEEE  
SS_PSSPRED:         EEEE                 EEEEEEEEE  
DO_DISOPRED3:                                       
DO_SPOTD:                                           
DO_IUPRED2A:                                        
METAL:                          H                   
ACT_SITE:                                 R         
CARBOHYD:                              N