O00570  SOX1_HUMAN

Gene name: SOX1   Description: Transcription factor SOX-1

Length: 391    GTS: 7.367e-07   GTS percentile: 0.133     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 84      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPF 100
gnomAD_SAV:    V  #L  AH P    S      L  #      # AACSSDC A  G  E  R                   V  N           VA Q L DT#    
Conservation:  1221121023102011111101111120110120111111111110112242694465555558484877576975696999967964763846356567
SS_PSIPRED:                                                   HHH    HHHHHHH HHHHHHHHHH     HHHHHHHHHHHHH   HHHH   
SS_SPIDER3:                                                     H      HEEEE HHHHHHHHHH      HHHHHHHHHHHH   HHHH  H
SS_PSSPRED:                                                   HHH      EEEE  HHHHHHHHHH     HHHHHHHH HHHHH  HHHH HH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      D D  
DNA_BIND:                                                        VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPF

                       10        20        30        40        50        60        70        80        90     
AA:            IDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAYPGSVAAAA 200
gnomAD_SAV:         G H   IRD L         I # F   NCLP SR  # S     TVM V M                                           
Conservation:  6575669685966568966648463263244565426364224253311111134233241234121252333211111111334473234411111111
SS_PSIPRED:    HHHHHHHHHHHHHH                                                                                 HHHHH
SS_SPIDER3:    HHHHHHHHHHHHHH              HH                                                                 HHHHH
SS_PSSPRED:    HHHHHHHHHHHHHH                                                                                 HHHHH
DO_DISOPRED3:                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DDDDDDDD  DDDDDDDDDDDDDDD  DDD                                 DD DDD DDDDDD   D                   
DNA_BIND:      IDEAKRLRALHMKEHPDYK                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            AAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAA 300
gnomAD_SAV:                           L V  TL  SR#L  N   #  V  C        S  T  S   G     R                          
Conservation:  1113234112333444430331111111111111111121112434366432242533333444643534311111111111111111111411211111
SS_PSIPRED:    HHHHHHHHHHHHH                                                                  HHHHHHHH        HHHHH
SS_SPIDER3:    HHHHHHHHHHH                                                                     HHHHHH            HH
SS_PSSPRED:    HHHHHHHHHHH                                                                   HHHHHHHHHH     HHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD            D                              DDD

                       10        20        30        40        50        60        70        80        90 
AA:            AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI 391
gnomAD_SAV:                                                      S                            V   D#      
Conservation:  1111221243133341332331304311121321231333332233436223312111111132233221324331311213243132100
SS_PSIPRED:    HHHHHHHH   HHHH                        HHHHHH          HHHHHHHHH                           
SS_SPIDER3:    HH                                     HHHH            H HHHHHHH                           
SS_PSSPRED:    HHHHHHHH                               HHHHHH          HHHHHHHHHH                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:               DDDDDDDDDDDDDDDDDDDDDDDDD         D          DDDDDDD      D DDDDD DD D