O14522  PTPRT_HUMAN

Gene name: PTPRT   Description: Receptor-type tyrosine-protein phosphatase T

Length: 1441    GTS: 1.863e-06   GTS percentile: 0.604     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 9      gnomAD_SAV: 621      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASLAALALSLLLRLQLPPLPGARAQSAAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPMLDQAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDT 100
PathogenicSAV:                                                                     A                               
BenignSAV:                                 P                                              V                        
gnomAD_SAV:                                PR  C   D            SR        C R     TA      V  IP G      YF          
Conservation:  3333333333331000000000000000022324222221543333333344266432310432323224233443463335213445353332457575
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSS                                                                           
SS_PSIPRED:     HHHHHHHHHHHHHHH                           EE         EEEE               EEEEE        EEEHH         
SS_SPIDER3:     HHHHHHHHHHHHHHH               E           EEE       EEEEE               EEEEE        EEEEE        E
SS_PSSPRED:    HHHHHHHHHHHHHHHH                                     EEE                 EEEEE       HHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                   N                   N  

                       10        20        30        40        50        60        70        80        90     
AA:            HCIDFHYYFSSRDRSSPGALNVYVKVNGGPQGNPVWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQN 200
gnomAD_SAV:      LN R   T HN     T  I  E D DA         R I GS      T      R    V D I    #    T# KAWF  R          V  
Conservation:  8963824423432331642656753563633626759283231129112987564456336542564433263262544335143485623595554444
SS_PSIPRED:    EEEEEEEEEE        EEEEEEEE        EEEE        HHHEE         EEEEEEEEE      EEEEE  EEEEE             
SS_SPIDER3:    EEEEEEEEEEE    E EEEEEEEEE         EE      HHHHHHEH  E       EEEEEEEEE    EEEEE  EEEEEEE            
SS_PSSPRED:     EEEEEEEE           EEEEEE                  HHHHHHHEEE      EEEEEEEEE      EEEEEEEEEEEE             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                          N                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            VEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTAQRSVSKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAV 300
gnomAD_SAV:    M A MAH      F    RF R E   * LK  H P    H   Y             KQRI#  C   #             FM K  M    QQ    
Conservation:  5557645483638353942113227445322462534324631517563427352553423352555323522556354653634546636656649245
SS_PSIPRED:     EE     EEEEEEEEEEE    EEEEEE         EEE      EEEEEEEE      EEEEEEEEEE          EEEE          EEE  
SS_SPIDER3:    EEE     EEEEEEEEEE     HHEEEEE   E     E EE   EEEEEEEEEE EE  EEEEEEEEEE       EE EEEE           EE  
SS_PSSPRED:            EEEEEEEE      HHHHH              EEEE   EEEEEE         EEEEEEEE         EEEEE          EE   
DO_DISOPRED3:                                                                                     DDDD   DDDDD     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                   D                   
DISULFID:                  C                                                     C                                 
CARBOHYD:             N                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            GATYLWIKPNANSIIGDGPIILKEVEYRTTTGTWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEIVDIRA 400
BenignSAV:                                                                                                    I    
gnomAD_SAV:              G        V M     C  I MGS   TAY# K         I  K Q       DA M L          G  LAY   KAD I L  
Conservation:  8887596578687557786842556485533535262334622365455848766735456845444654538563523444424855564252645657
SS_PSIPRED:      EEEEE            EEEEEEEEE     EEEEEEE   EEEE       EEEEEEEEE             EEEE          EEEEEEE   
SS_SPIDER3:      EEEEE            EEEEEEEEE     EEEEEEE   EEEEE E    EEEEEEEEEE            EEEE           EEEEEEE  
SS_PSSPRED:     EEEE              EEEEEEEEE     EEEEE     EEEE       EEEEEEEEE             EEEE            EEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   DDDDDDDDDDDDDDDDDDDDD               

                       10        20        30        40        50        60        70        80        90     
AA:            RQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQQYEAEEVIQTSSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQTEEDVPGAVPLESIQGGPFEE 500
gnomAD_SAV:    Q    L    S V  C YC #  L  HH S   E K#V #M        QR P  V  W Q S      QTKTK             L   FV  E    
Conservation:  5654638536694679973777853833232124422242131174545449385556364748283992467146136877978626524633334575
SS_PSIPRED:     EEEEEEE         EEEEEEEEEEEE      EEEEE     EEEE       EEEEEEEEE          EEEEE          EEEEE     
SS_SPIDER3:     EEEEEEE     E  E EEEEEEEEEEE     EEEEEE     EEEEE      EEEEEEEEE          EEEEE            EE      
SS_PSSPRED:     EEEEEEE        EEEEEEEEEEE      HHHHHH      EEEE       EEEEEEEEE          EEEEE                    
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDDD        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           DDDDDDD  D      DDD         
CARBOHYD:                          N                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            KIYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPGTTYSFTIKASTAKGFGPPVTTRIATKISAPSMPEYDTDTPL 600
gnomAD_SAV:    E   R  SLKD D FVM  K   EG S    RT  W L# T# EIQ   Y      H   A   NM  N TT C T   IQ    T   T S  N  N  
Conservation:  5515462372445646224663665355464235853838553823999353926939968738555566398583433244474966928628525256
SS_PSIPRED:    EEEEEEE        EEEEEEEEEE              EEEEE    EEEEE       EEEEEEE          EEEEEEE                
SS_SPIDER3:    EEEEEE        EEEEEEEEEEEE              EEEE     EEEEE      EEEEEEEEE        EEEEEEE                
SS_PSSPRED:    EEEEEE         EEEEEEEEE                 E      EEEE        EEEEEEEEE         EEEEEE                
DO_DISOPRED3:                              DDDDDDDDDDDDDDD                                              DDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                          DD                                           DDD D  DDDDDDDDD
CARBOHYD:               N                                    N                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            NETDTTITVMLKPAQSRGAPVSVYQLVVKEERLQKSRRAADIIECFSVPVSYRNASSLDSLHYFAAELKPANLPVTQPFTVGDNKTYNGYWNPPLSPLKS 700
gnomAD_SAV:        MA I I R T  #   # A     E  QV   Q TS FTKF L  G  QSG   #  RH    WR TK    R    V       *    V  V I
Conservation:  5566265633557634455534364468463433423322422255455455375512561674575542214113235436565563674635665266
SS_PSIPRED:         EEEEEE          EEEEEEEE                                 EEEEE  HH       EE     EE  EE        E
SS_SPIDER3:         EEEEEE E        EEEEEEEEE              H                 EEEEEE          EEE     E  EE        E
SS_PSSPRED:         EEEEEE          EEEEEEEEE      HHH                      HHHHHE           EE                   E
DO_DISOPRED3:  DDDD      D                    DDDDDDDDDDDDDDDDDDDDDDDDDDD                                          
DO_SPOTD:                                        DD                                                                
DO_IUPRED2A:    DD DDDD  D                                                                                         
CARBOHYD:      N                                                    N                             N                

                       10        20        30        40        50        60        70        80        90     
AA:            YSIYFQALSKANGETKINCVRLATKGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSYSYYLKLAKKQKETQSGAQREMGP 800
gnomAD_SAV:    HN     I  TS    V   H  K #T  H    L#        MN   MV  F T VV V  M   V K   D  SF#    TR R   H E R  #  
Conservation:  6365578384585334435435334644534543253435474666455366548664554653343356344435556579865957684544658854
STMI:                                                         MMMMMMMMMMMMMMMMMMMMM                                
SS_PSIPRED:    EEEEEEEEE        EEEEEE                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHEEE                   
SS_SPIDER3:    EEEEEEEE          EE                       HHHHHHHH  HHHHHHHHHHHHHHH H      HHHHHHH H               
SS_PSSPRED:    EEEEEEEE                                     EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                    
DO_DISOPRED3:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                              DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                DDDDDDDDDDDDDDDDDDD                                      DDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              DDDDDDDDDDDDDD                                                DDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            VASADKPTTKLSASRNDEGFSSSSQDVNGFTDGSRGELSQPTLTIQTHPYRTCDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQ 900
BenignSAV:                 T                                                                                       
gnomAD_SAV:    MPFTE   I  RT LKE V F RF #I RL VDICR  F   PR   R C#  GAM K N QH    S #        M  R SRS R     K    V 
Conservation:  6233453345454344542443435336531333312145445435342332441363475454458665668995668668554788986666463566
SS_PSIPRED:                                                                          HHHHHHHHHH         EEEEE      
SS_SPIDER3:              EE                                                         EHHHHHHHHHH         EE H       
SS_PSSPRED:                                                                         HHHHHHHHHHHH        HHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D    D DDD                 D            DDDDD     DD

                       10        20        30        40        50        60        70        80        90     
AA:            TASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRY 1000
BenignSAV:                                     L                                                                A  
gnomAD_SAV:      L N    N  H   Q V V P   CW    L   HLQ         G  RQLP     PSLT   A            S  IV  D M       AQ 
Conservation:  5556726845454386857557445558757213353235664434453667454556654454446315564456555643443543754444544658
SS_PSIPRED:                                   EE                       EEEE    HHHHHHHHHHHHHH   EEEE    EE         
SS_SPIDER3:       HHHH                     EEEEE         EE HH         EEEE    HHHHHHHHHHHHH   EEEEEEEEEEE  EE E EE
SS_PSSPRED:                                EE                          EEE       HHHHHHHHHHHH   EEEEEE EEE  EEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDD D DDDDD                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            WPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTM 1100
gnomAD_SAV:      G AQF R      TG GS    I C L   N    A Q  H  #LIT  H SI  H        C    PKTL          GA       V  EA 
Conservation:  7775455448557474553454546476444456436788964789987666988655566556655486454532465445887779999784565645
SS_PSIPRED:          EE  EEEEEEEEEE   EEEEEEEEEE      EEEEEEEE           HHHHHHHHHHHH         EEEE         EEEHHHHH
SS_SPIDER3:        EEEE  EEEEEEEEEE   EEEEEEEEEE     EEEEEEEEE            HHHHHHHHHH        E EEEEE      HHHHHHHHHH
SS_PSSPRED:              EEEEEEEEEE  EEEEEEEEEEE     HHHHHH              HHHHHHHHHHH          EEEEE        EHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                          D                                                
REGION:                                                                                           CSAGAGR          
ACT_SITE:                                                                                         C                

                       10        20        30        40        50        60        70        80        90     
AA:            LDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLP 1200
gnomAD_SAV:        KY EM      MC  Q  S S I R   SE   N  R  Y RDK  TLL   C  CN    REA A    V    L F    TH W#K  NT   L
Conservation:  6686657777766776777656756685657997567765799979978444345566445455446866566746666746434673434445644548
SS_PSIPRED:    HHHHHHH    HHHHHHHHHH        HHHHHHHHHHHHHHHHH   EEEHHHHHHHHHHHH          HHHHHHHH        HHH       
SS_SPIDER3:    HHHHHH   E HHHHHHHHHH        HHHHHHHHHHHHHHHH    EEEHHHHHHHHHHHH         HHHHHHHHHH       HHH H     
SS_PSSPRED:    HHHHHH    EHHHHHHHHHHH H  EE HHHHHHHHHHHHHHHHH      HHHHHHHHHHHH         HHHHHHHHH                  
DO_DISOPRED3:                                                                                                  D D 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                  Q                                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            RNHDKNRSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDTAQFCMQYWPEKTSGCYGPIQ 1300
BenignSAV:                                       T             A                                                   
gnomAD_SAV:    Q R   QG  M  V C P       R        T TG      T M A       M     V#SN  YC      DL          S  I VG  L  
Conservation:  6676576344466455677875736964688688655666567667466676677743999967477496646688657449343668884334535546
SS_PSIPRED:                                     HH          EEEE      HHHHHHHHHHH    EEEE                    EEE EE
SS_SPIDER3:                      E            EEEEE        EEEEE      HHHHHHHHHHH    EEEE           EE     EEEE  EE
SS_PSSPRED:                                   H HH         EEEEE      HHHHHHHHHHH    EEEE     HHH                EE
DO_DISOPRED3:  DD                                                                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:             S                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            VEFVSADIDEDIIHRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQ 1400
gnomAD_SAV:     D I TH N     G  C     Q RG FH      S    V W M H  H   R  Q#   #     RK  HS IQ     AH      V         
Conservation:  5343444444455444353332345444343423223435522543523365453333334433333434434433232345435624343254344534
SS_PSIPRED:    EEEEE      EEEEEEEEEE       EEEEEEEEE            HHHHHHHHHHHHHHHHHH      EEEEE     HHHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEEE    EEEEEEEEEE      EEEEEEEEEE            HHHHHHHHHHHHHHHHH       EEEEE       HHHHHHHHHHHHHHH
SS_PSSPRED:    EEEE       HHHHHHHHH        EEEEEEE              HHHHHHHHHHHHHHHHH       EEEE       HHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                                                                   C                      

                       10        20        30        40 
AA:            QNIIDVFHIVKTLRNNKSNMVETLEQYKFVYEVALEYLSSF 1441
BenignSAV:                  C                           
gnomAD_SAV:     YNM MLRVM   #   F    S      L  ME     P 
Conservation:  43233455344235435444543523233323322323222
SS_PSIPRED:        HHHHHHHHHHH        HHHHHHHHHHHHHHHH  
SS_SPIDER3:       E HHHHHHHHHH   H    HHHHHHHHHHHHHHHH  
SS_PSSPRED:    H HHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHH 
DO_DISOPRED3:                                           
DO_SPOTD:                                               
DO_IUPRED2A: