O14917  PCD17_HUMAN

Gene name: PCDH17   Description: Protocadherin-17

Length: 1159    GTS: 1.269e-06   GTS percentile: 0.340     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 592      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARLQPGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNA 100
gnomAD_SAV:     C YV GY   CT VV  # RD C   D #VS   #H#DMN G  TW L VQG    L #WA  G P   VT  R #  GR   HI  L       G H 
Conservation:  4110102111222111331242233145223333553433642122222222232011122325565557553644342168452455668872484234
STMI:          SSSSSSSSSSSSSSSSS                                                                                   
SS_PSIPRED:     HHHHHHHHHHHHHHHHHH      HHH    EEEEEHHHH                      EEEE       EEE     EEEE     HHHHH    
SS_SPIDER3:     HHHHHHHH    HHHHH   EEEE H      EEE HHHH                     EEEEE      EEEEE     EEE  E  HHHH     
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHH              EEEEE                         EEEEE      EE      EEEE     HHHHHHH  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDD                                                                                   
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:                                      D        DDDDDDDDDDDD DDDDDD                                     
CARBOHYD:                           N                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            KCQLSLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKA 200
gnomAD_SAV:    N  V     VDG D    R   L     S    W HTQI     # ADIG #F N L # SS SA G    ##EN DH # E   G  RA   Q  L   
Conservation:  6926579576654786675676285998591964335546959693668649833939694515656482555253548487593988976579966772
SS_PSIPRED:      EEEEEEEE   EE EEEEEEE          HH EEEEEE                         EEEE       EEEEEEE      EEEEEEE  
SS_SPIDER3:      EEEEEEEE   EEEEEEEEEEE            EEEEEEEE     EEE              E EE E    EEEEEEEEE     EEEEEEEE  
SS_PSSPRED:     EEEEEEEEE HHHHEEEEEEEEE             EEEEE                                      EEEE         HHHHHH 
DO_DISOPRED3:                             DDDDDDDD                       DDD                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDDDD                           DDDDD
MOTIF:                                                                                              RGD            

                       10        20        30        40        50        60        70        80        90     
AA:            LDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT 300
gnomAD_SAV:        K  Q  FL     S DL GY#N#R SAE T     G     SF  M     P  DAG  Y     T    SSV   Y  T M  #A#  V TYT  
Conservation:  9989254563624582888465326433646684969995839424363646397451532644668793998398674966345435443459264425
SS_PSIPRED:           EEEEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEE         EEEEEEE     HHHHHHHEE    
SS_SPIDER3:           EEEEEEEEEE  E  EEEEEEEEEEEE            EEEEEE        EEEEEE         EEEEEE      HHHHHHHEE    
SS_PSSPRED:     HHHHHHHHHHHHHHH        EEEEEEEEEEE           EEEEEEE      EEEEEEE          EEEEEE     HHHHHHH      
DO_DISOPRED3:                                       DDDDDDDDD                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:          D DDDDDDDDD       DDDDDDD            DDD               DDDDD      D                          
CARBOHYD:                                                                       N                                  

                       10        20        30        40        50        60        70        80        90     
AA:            GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGG 400
gnomAD_SAV:         R S     H I    L V# V       #R IR NVVHGYY E   R  FL#P V    SR D  V   P S Q  S K#  H W #RVE A  S
Conservation:  9453515156582212365868648599966959896382626386929273666445746994743558989988593849288643846492222222
SS_PSIPRED:     EEEE          EEEEEEEEE         EEEEEEEEE       EEEEEE              EEEEEEEE        EEEEEEE        
SS_SPIDER3:      EEEE         EEEEEEEEEE      EEEEEEEEEEE        EEEEE              EEEEEEEE     H   EEEEEE        
SS_PSSPRED:      EEEE          EEEEEEEE         EEEEEEEEEEE      EEEEEE            EEEEEEE E         EEEEEE        
DO_DISOPRED3:                                                 DDDDDDDDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                      D DDD                                               DDDDD        DDDDDDDD   D DDD

                       10        20        30        40        50        60        70        80        90     
AA:            GGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPD 500
gnomAD_SAV:     #  R #V  S        K   L  Y##       Q    VLTQ #V AAFS    IST     H    L IR  H FR   D       V      S 
Conservation:  2222222245894857956676965756399992383786963849481649435697286739699838493622923463688498548658492969
SS_PSIPRED:                EEEE     EEEEE          EEEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE   
SS_SPIDER3:               EEEEE    EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEEE       EEEEEEEE   
SS_PSSPRED:                 EE      EEEE             EEEEEEEE         EEEEEEEEE            EEEEEE        EEEEEE    
DO_DISOPRED3:                                                                    DDDD D                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDD              DDD D     DDDDDDDDDDDDD           DDD            DD              D          
CARBOHYD:                                            N             N                                               

                       10        20        30        40        50        60        70        80        90     
AA:            LGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN 600
gnomAD_SAV:     S      FC#M L V#N# V   E     T     P   YL   EV  LQ  V    EAV#FQ  TK      E      # L       S    # HS
Conservation:  4929978483734637344573668464534846864968669377397947396939292455654487737488989494743928597655626865
SS_PSIPRED:         EEEEEE       EE  EEEEE      EEEEE        EEEEEEEEEE        EEEEEEEEEE       EEE         EEE    
SS_SPIDER3:       EE EEEEEE      EE  EEEEE     EEEEEE  E    EEEEEEEEEEE       E EEEEEEEEE       EEEE       EEEEEE  
SS_PSSPRED:         EEEEEE        EEEEEEEE    HHHHHHHH  HHHHHHEEEEEEEEE          EEEEEEEE       EE                 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:         N                                                             N                       N          

                       10        20        30        40        50        60        70        80        90     
AA:            AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQH 700
gnomAD_SAV:     A RF   A HS  R    GRL A  VLNS #H  L          M  H   E# AMM      S N   IPP   QHV H ##*YVLK   #   K Y
Conservation:  4539536546692929387796658343356432594463238664423233522243366574529695558553845454322211225322223323
SS_PSIPRED:          EEEEEEEE    HHEEEEEEEEE      EEE     EEEE   EE     EEEEEEEEEE      EEEEEEEEEEE                
SS_SPIDER3:         EEEEEEEE      EEEEEEEEEE      EEEE     EEEE E       EEEEEEEEEE  E   EEEEEEEEEEEE               
SS_PSSPRED:         EEEEEEEEE        EEEEEE                EE           EEEEEEEEE         EEEEEEEE                 
DO_DISOPRED3:                                                                                          DDDDDDBBBD  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                             DDD D     

                       10        20        30        40        50        60        70        80        90     
AA:            HWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYFDY 800
gnomAD_SAV:    Y  V  S       T VV    L  MVIR  #D R  C    G   N N#   W#N    T#S  GST E N A   SV        R F GAFL   N 
Conservation:  1474897686695477369755955776777556973559675566753533722439766769779799776598955265979996779467746977
STMI:                 MMMMMMMMMMMMMMMMMMMMM                                                                        
SS_PSIPRED:        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH          EE                     EEEE  HH       EEEE            EEE
SS_SPIDER3:       HHHHHHHHHHHHHHHHHHHHHHHHHH             EE                      EEEE          EEEEEE            EE
SS_PSSPRED:        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                E                 E
DO_DISOPRED3:                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                       DDDDDD D      DDDDDDDDDDDDDDDDDDDDDD   DDDDDDDDD      DDDDDDDDDDD  
DO_IUPRED2A:                                                         DDDDD   D    D           DD   DD              

                       10        20        30        40        50        60        70        80        90     
AA:            QTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS 900
gnomAD_SAV:     SSV  TW GL #T I  SCS  P# REYTV  AGC   E  VR NTT        NH LV    T N    G    M   AA V               
Conservation:  7559975467564665663465233324524664383463343472324657656444542645624485564543444554643584669666885689
SS_PSIPRED:    EEEE         EEE                                                     HH          HHH                
SS_SPIDER3:    EEE          EE                                                                    H                
SS_PSSPRED:    EE                                                                               HHH                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:            DDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:             DD  DDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCT 1000
gnomAD_SAV:     E         V   GT R  SALA I T  H LG   K I   G  C   #     L  DS*T  EA #P  S  IIG  I   S#KS       S   
Conservation:  7585564522443334363232231225124322133345245544656656554831212234342432343434234312234134223422454634
SS_PSIPRED:                 HHHHH                 HH    HHHH                           EEE                     EEE 
SS_SPIDER3:               HHHHHHH                 H     HHHH                     HHH H EE                       EEE
SS_PSSPRED:                 HHHH                                                       EEE                     EE  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              DDDDD DDDDDD             DDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDD          DDDDDDDDDDDDDDDD                      D      DDD DDDDDDDD    DDDDDDDD            

                       10        20        30        40        50        60        70        80        90     
AA:            FGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQYLSPSKQPRDPPFMASDQMARVF 1100
gnomAD_SAV:         G L#V TT II NI   #VPR   RD  P       V  K#S    D V D                SA N   LT      #SL# YHR SG  
Conservation:  4774213122034223211333311122133354333622222222222222214213212222431322422222222222222222212221122222
SS_PSIPRED:              EE    HHH       HHHH                                  HHHHH                        HHHHHHH
SS_SPIDER3:            EEEEEE            HHH                                  HHHH                            HHHHH
SS_PSSPRED:               HHH   HHHHHHH                                        HHHHH                         HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DD           DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    
DO_IUPRED2A:                               DDDDD  D   DDDD  D        DD DDD    DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD  

                       10        20        30        40        50        6
AA:            ADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVREIDKLLQDCRGNDPVAVRK 1159
gnomAD_SAV:     H R  G Q F  VDT     E  S     Q M S #    TE      Q  G# PLG 
Conservation:  22122212221222411332122222212231321424325532443622254142233
SS_PSIPRED:    HH        HHHHHHHHHHH             HHHHHHHHHHHHHHHH         
SS_SPIDER3:    HHHH      HHHHHHHHHH              HHHHHHHHHHHHHHH          
SS_PSSPRED:    HH        HHHHHHHHHH              HHHHHHHHHHHHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DD BBBBBDDDDDDDDDDD
DO_SPOTD:        DDDD             DDDDDDDDDDDDD                  DDDDDDDDD
DO_IUPRED2A:   DDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDD   DD DD DDDD