O14967  CLGN_HUMAN

Gene name: CLGN   Description: Calmegin

Length: 610    GTS: 1.538e-06   GTS percentile: 0.465     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 3      BenignSAV: 3      gnomAD_SAV: 277      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHFQAFWLCLGLLFISINAEFMDDDVETEDFEENSEEIDVNESELSSEIKYKTPQPIGEVYFAETFDSGRLAGWVLSKAKKDDMDEEISIYDGRWEIEEL 100
gnomAD_SAV:    #  PG R #   ML   K  V G  IDMQ       K #I   D##  V  EAT  T*DAH #A    EM T #F   P  #       # N  R    V
Conservation:  8000011222152111103100511241232110101110101001123162361425344545385140515821834283313122346592715423
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHH                             EE         EEE          EE           HHEEEEEEEE   
SS_SPIDER3:       HHHHHHHHHHHHHHHHHH                     H       E    E EEEEEEEE     HH  EE   E       EEEEEEEEEEEE 
SS_PSSPRED:       HHHHHHHHHHHHHHHH                                       EEEEEEE         EE            E     EEE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                      
DO_IUPRED2A:                            DDDD  DDDDDDD                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            KENQVPGDRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLLADTDDLILENFYDKTSYIIMFGPDKCGEDYKLHFIFRHKHP 200
PathogenicSAV:                             Q                                                                       
BenignSAV:                                                                S                                        
gnomAD_SAV:      K L      L     EY  #YSI*  T V V     D H     VDVN    H  I SNI  FM   L            E   AG *FQ L  L  H
Conservation:  2211227637755361655556420403251712246457887286254586767377541211616218262948458899959943576878776357
SS_PSIPRED:            EEEEE  HHHHHHHHH            EEEEEEEE         EEEEEE       HHHH      EEEE         EEEEEEEE   
SS_SPIDER3:               E   HHHHHHHHH            EEEEEEEE     EEEEEEEEEE       HHH       EEEE  EE     EEEEEEEE   
SS_PSSPRED:             EEE  HHHHHHHHHHH           EEEEEEEEE        EEEEEE                EEEEE         EEEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                        C                                 C               
MODRES_A:                                 K                                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            KTGVFEEKHAKPPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLLEDVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDESEP 300
PathogenicSAV:                                            G                                                        
BenignSAV:                                                                                              I          
gnomAD_SAV:         *G Y T  H  I     NGR  F   MIK   A     G R  DE R   E F  L  S  T  SD RN  K#  T Q      I   E#G    
Conservation:  3550248775424426651474863698769352757475445851454385771542856392255395151681489652474731537925888356
SS_PSIPRED:          HH        HHH       EEEEEEE    EEEEEE  EEEEE                             HHH    HH            
SS_SPIDER3:        EEHH          HH      EEEEEEE     EEEEE  EEEEEE                E         HH        H    H       
SS_PSSPRED:        HHHH                  EEEEEEE     EEEEE  EEEE                                                   
DO_DISOPRED3:                                                                   DDDDD   DDD                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DDDD                                            DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            AQIEDSSVVKPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRIGCGEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDD 400
PathogenicSAV:                    R                                                                                
BenignSAV:                                                        W                                                
gnomAD_SAV:     RT*      HP  FG  #  V   K  R  #R   M  G  S  V  L RQ      R  T     HE  CSRL# N   * R  IHQ VS     AG 
Conservation:  1252812516815975253155264061580894345693975534394291487818129342861558383555437427681838646197266670
SS_PSIPRED:                                                    HHH                                                 
SS_SPIDER3:                                                             E   EE                               HH    
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:              DD DDD DDDDDDD  DDD                                  DDBDDD  DD                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                     
DISULFID:                                                        C   C                                             

                       10        20        30        40        50        60        70        80        90     
AA:            HPFLLTSFSALGLELWSMTSDIYFDNFIICSEKEVADHWAADGWRWKIMIANANKPGVLKQLMAAAEGHPWLWLIYLVTAGVPIALITSFCWPRKVKKKH 500
gnomAD_SAV:     T   PF N VC #  P  P        M L # I Y *  HS SL    V #   A#   S TVT    RF F    S  G  VV  TLF  K     R
Conservation:  2963734519496888645546489764642321353284146822622442633444215421542234889357343345643422473762514100
STMI:                                                                                 MMMMMMMMMMMMMMMMMMMMM        
SS_PSIPRED:     HHH     EEEEEEE     EEEEEEEEE  HHHHHHHHHH  HHHHHHHHH    HHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHH  HHH    
SS_SPIDER3:     H H     EEEEEEEE    EEEEEEEEE  HHHHHHHHHH  HHHHHHHH     HHHHHHHHHHH HHHHHHHHHH HHHHHHHHHHH         
SS_PSSPRED:            EEEEEEE      EEEEEEEE   HHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHH          
DO_DISOPRED3:                                                                                              D       
DO_SPOTD:                                                                                                    DDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KDTEYKKTDICIPQTKGVLEQEEKEEKAALEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEIIEGQEESNQSNKSGSEDEMKEADESTGSGDGPIK 600
gnomAD_SAV:        H   NMY   K R  K  K  K ETV T  Y DKA QR N   P*Q  QG   GE     * TGR  KNH     R#  KT     #  P N L  
Conservation:  1010232030121012110221102010011111111210100100101101101001011221211211111010010011211110321100111111
SS_PSIPRED:                      HHHHHHHHHHHH     HHHHHHH   HHHHHHH        HHHHHHHH  HHHHH      HHHHHHHH           
SS_SPIDER3:      H               HHHHHHHHHHH      HHHHHH       HH          HHHHHH               HHHHHH             
SS_PSSPRED:     HHH              HHHHHHHHHHH      HHHHHH       HHHH         HHHHHH              HHHH               
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                  DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                 S               S  S S         S  S      

                       10
AA:            SVRKRRVRKD 610
gnomAD_SAV:      H    *N 
Conservation:  2231220110
SS_PSIPRED:              
SS_SPIDER3:              
SS_PSSPRED:              
DO_DISOPRED3:  DDDDDDDDBB
DO_SPOTD:      DDDDDDDDDD
DO_IUPRED2A:   DDDDDDDD  
MODRES_P:      S