O15259  NPHP1_HUMAN

Gene name: NPHP1   Description: Nephrocystin-1

Length: 732    GTS: 1.676e-06   GTS percentile: 0.526     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 2      BenignSAV: 8      gnomAD_SAV: 376      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLARRQRDPLQALRRRNQELKQQVDSLLSESQLKEALEPNKRQHIYQRCIQLKQAIDENKNALQKLSKADESAPVANYNQRKEEEHTLLDKLTQQLQGLA 100
BenignSAV:         L                                 T     L                                                       
gnomAD_SAV:    I   L ##AFHV QLCS *RN   G W F     AT  TS    L #K M    S G#   D  R  Q#     LG H  KR   R P  #  RRQ  F 
Conservation:  5112201121201121021321243162011200112101011011185026302323310261272745725877582549146103811411361061
SS_PSIPRED:            HHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:            HHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHH HHHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHH  
SS_PSSPRED:            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDD                     DDDDDDDDDBBB  DD D  D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DD DDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDD  DD  DD          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        
MODRES_P:                                                   Y                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            VTISRENITEVGAPTEEEEESESEDSEDSGGEEEDAEEEEEEKEENESHKWSTGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEG 200
gnomAD_SAV:      T   DV Q E RP   GGR N  N       *GT K A DEK  KP   *AS   VTI   AT    E I #  K    T QNTG   M    R S D
Conservation:  0032111112101002133212122223211333221122231121000001000043554370546258954335548173242299892635329138
SS_PSIPRED:    HHH            HH                   HHHHHHHHH          EEEEEE                EEEEEEE     EEEE     EE
SS_SPIDER3:                   HHHH                  HHHHHHHH H        EEEEEE         E E    EEEEEEE   E EEEEE    EE
SS_PSSPRED:    HH                                   HHH               EEEEEE               EEEEEEEE      EEE       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                   
DO_IUPRED2A:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             D D     
MODRES_P:                          S S  S                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            LVPRTYLEPYSEEEEGQESSEEGSEEDVEAVDETADGAEVKQRTDPHWSAVQKAISEAGIFCLVNHVSFCYLIVLMRNRMETVEDTNGSETGFRAWNVQS 300
BenignSAV:                                  V                                  Y           Q                       
gnomAD_SAV:    FLA# FV ACG   #   PR     D IQVM K   RS  TR  N    VI *V   VD    L   L F    PT*  K  M   T   R#  V*TIHT
Conservation:  5697877210012221121131215411311232201111202013332333443151111111111111111111111111111111111111111111
SS_PSIPRED:    EEE                        HHH                 HHHHHHHHHH             HHEEE                         
SS_SPIDER3:    EEE  E  E                    H         H     HHHHHHHHH      E       HHHHHHHH  H              E E    
SS_PSSPRED:                                                   HHHHHHHHHH        HHHHHHHHHHHHH                      
DO_DISOPRED3:            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD    DDDDD DDDDDDDDDDDDDDDDDDDDDDDD           
DO_IUPRED2A:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                        DDD   DD        

                       10        20        30        40        50        60        70        80        90     
AA:            RGRIFLVSKPVLQINTVDVLTTMGAIPAGFRPSTLSQLLEEGNQFRANYFLQPELMPSQLAFRDLMWDATEGTIRSRPSRISLILTLWSCKMIPLPGMSI 400
PathogenicSAV:                                          R                                                          
BenignSAV:                                      M                                                                  
gnomAD_SAV:    *ESV  I QA F*R  IN   MKRTV TE    M   V  KR R *V *  PS F   EV  G R  YG  DI SP L CS FT I     L RF  I V
Conservation:  1111111111111244242832374572776262512732260164222545826316354847514523133622113332223554386168285244
SS_PSIPRED:       EEEE           HHHH           HHHHHHHH       EEE     HH        EE     EEE    EEEEEEEEE           
SS_SPIDER3:      EEEEE                            HHHHH       EEEE  E        E EEE     EEEEEE EEEEEEEEEEE          
SS_PSSPRED:                                     HHHHHHHH    HHHHH          HHHH         EEE   EEEEEEEEEEE          
DO_DISOPRED3:   D DDDDDDDD D DDDD D                                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                                                      Y                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            QVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPKTWTFSPQVTRILPCLLDGDCFIRSNSASPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASG 500
gnomAD_SAV:      PCK IH     V     H YI  TA*         #P#  AG   RF H     S      EPRV L   V C##D  D   KI SVC  V     N 
Conservation:  5468866436456513566855466523223124383866453536824559549467331243565878597672533955667698683664834228
SS_PSIPRED:      EEEEEEEEEE   EEEEEEEEEEEEE      EEEE               EEEE       EEEEEEEEEEEEE     EEEEEEEEEEEEEE    
SS_SPIDER3:    EEEEEEEEEEEE   EEEEEEEEEEEEE      EEEE               EEEEE      EEEEEEEEEEEEE       EEEEEEEEEEEE    
SS_PSSPRED:    EEEEEEEEEEE    EEEEEEEEEEEEE       EEE               EEEE       EEEEEEEEEEEEE      EEEEEEEEEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VPIPAKTYELFLNGGTPYEKGIEVDPSISRRAHGSVFYQIMTMRRQPQLLVKLRSLNRRSRNVLSLLPETLIGNMCSIHLLIFYRQILGDVLLKDRMSLQ 600
gnomAD_SAV:    IAM #  *       S #*E#F L# LV * VRV I   L  # W     L   C T  P SG     G     # F   F  CQ  I       KL  E
Conservation:  1435163355053687745223234332245302424263311652436246354231223118438844444225323472378647463753461421
SS_PSIPRED:         EEEEEE              HHHH      HHHHHHH     EEEEE     HHHHHHHH  HHHHHH HHHHHHHHHHHHHHHHHHH       
SS_SPIDER3:     E E EEEEEEE             H H       HHHHHHH     EEEEE     H  HHHHH   HHHHHHHHHHHHHHHHHHHHHHHHH       
SS_PSSPRED:         EEEEEE                        HHHHHHHH     EEEEE    HHHHHHHHH HHHHH  HHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:                           D DDD                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            STDLISHPMLATFPMLLEQPDVMDALRSSWAGKESTLKRSEKRDKEFLKSTFLLVYHDCVLPLLHSTRLPPFRWAEEETETARWKVITDFLKQNQENQGA 700
PathogenicSAV:                                                                                                   R 
BenignSAV:                                                                                                 R       
gnomAD_SAV:        TG R VT  LV    T  I     L T E NI Q#   KV    Q M     YNSM  F QY H  T    Q Q    # RI#A    KKK   RT
Conservation:  4554555438567504355364566553272333214343264401142104114422132464331144012644313511442141223004301122
SS_PSIPRED:     HHH   HHHHHHHHHH  HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHH             HHHHHHHHHHHHHHHHH HH   H
SS_SPIDER3:       H   HHHH HHHH   HHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHH             HHHHHHHHHHHHHHHHH     HH
SS_PSSPRED:           HHHHHHHHHHH HHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHH              HHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30  
AA:            LQALLSPDGVHEPFDLSEQTYDFLGEMRKNAV 732
gnomAD_SAV:    F G   S RI DH E  K  C      K    
Conservation:  21144312105048543624586501110010
SS_PSIPRED:    HHHHH        EEHHHHEEE  HHHHH   
SS_SPIDER3:    HHHH      E  E HEEEEEE        HH
SS_PSSPRED:    HHHHH            HHHHHHHHHH     
DO_DISOPRED3:                             DDDDD
DO_SPOTD:                                 DDDDD
DO_IUPRED2A:    DDD                            
MODRES_P:                          Y