O15399  NMDE4_HUMAN

Gene name: GRIN2D   Description: Glutamate receptor ionotropic, NMDA 2D

Length: 1336    GTS: 6.196e-07   GTS percentile: 0.078     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 4      BenignSAV: 7      gnomAD_SAV: 276      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRGAGGPRGPRGPAKMLLLLALACASPFPEEAPGPGGAGGPGGGLGGARPLNVALVFSGPAYAAEAARLGPAVAAAVRSPGLDVRPVALVLNGSDPRSLV 100
BenignSAV:                                       S                                                                 
gnomAD_SAV:                                                                                           G     W      
Conservation:  1111111111111201130011131121212211111112111111111123433523621101112131222312222111123431413424252232
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:               HHHHHHHHHHHHHH                          EEEEEE  HHHHHHHHHHHHHHHHHH      EEEEEEE     HHHHH
SS_SPIDER3:                HHHHHHHHHHHH     H                    EEEEEEE  HHHHHHHHHHHHHHHHH     EEEEEEEEEE    HHHHH
SS_PSSPRED:                HHHHHHHHHHHHH                         EEEEEEE  HHHHHHHHHHHHHHHHHH      EEEEEEEE    HHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                      
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDD                                                        
DO_IUPRED2A:   DDDDDDDD                      DDDDDDDDDDDDDD                                                        
CARBOHYD:                                                                                                 N        

                       10        20        30        40        50        60        70        80        90     
AA:            LQLCDLLSGLRVHGVVFEDDSRAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEEYDWTSFVAVTTRAPGHRAF 200
gnomAD_SAV:        Y   E     A V  N   L      G      W   L             G D I        G R      M         A    L    WD 
Conservation:  2334133221233422343212322233343233232213223214422233032314324442334323531254544555632362343532573215
SS_PSIPRED:    HHHHHHHH   EEEEEE        HHHHHHHHHH     EEEE                EEE    HHHHHHHHHHHHHH    EEEEEEE    HHHH
SS_SPIDER3:    HHHHHHHHH   EEEEE      HHHHHHHHHHHHH    EEEEE                EEE   HHHHHHHHHHHHHH    EEEEEE      HHH
SS_PSSPRED:    HHHHHHHHH  EEEEEE      HHHHHHHHHHHHHH   EEEEE                      HHHHHHHHHHHHHHH    EEEEE     HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:         C                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            LSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLSAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGSGYVWFMVGPQLAGGGGSGAPGEPPLLPGGAPL 300
BenignSAV:                                                                                         F               
gnomAD_SAV:      HL M   CRR         M  S E   M R H L I T V    RVG   #        SD  E   #  V  #  T S  FR S  R V LE    
Conservation:  3224222354533273234343331222212234264533556345466246631570261245535334461143533333223125111111111115
SS_PSIPRED:    HHHHHHH        EEEEEEE      HHHHHHHHH     EEEEE  HHHHHHHHHHHHH        EEEEE HHH                     
SS_SPIDER3:    HHHHHHH     EEEEEEEEEE       HHHHHHH     EEEEE   HHHHHHHHHHHHH       EEEEEE  H                   E  
SS_PSSPRED:    HHHHHHH       EEEEEEE       HHHHHHHHH    EEEEE   HHHHHHHHHHHHHH      EEEEEE                         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                      DDDDDDDDDDD      

                       10        20        30        40        50        60        70        80        90     
AA:            PAGLFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESLHRYFMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTWEV 400
gnomAD_SAV:    S R    CL   W   SQ A G L I      T  C  D     SQ RCS  S LC Q                       PE    #IMF SGN M   
Conservation:  5243434234245324224332656544255133241250241331471110111121342345285542257457413756238243544432341863
SS_PSIPRED:        EEEEE    HHHHHHHHHHHHHHHHHHHHHHHH                       EEEEEEEEEE   EEE     EE  EEEEEEE     EEE
SS_SPIDER3:       HEEEEE   HHHHHHHHHHHHHHHHHHHHHHHHH                       EEEEEEEEE    EEE     EE  EEEEEEEE    EEE
SS_PSSPRED:        EEEE    HHHHHHHHHHHHHHHHHHHHHHHHHH                    HHHHHHH  EEE   EEE     EE  EEEEEEE     EEE
DO_DISOPRED3:                                                  DDDD                                                
DO_SPOTD:                                                      DDDD                                                
DO_IUPRED2A:                                                      D                                                
DISULFID:                                                     C                                                    
CARBOHYD:                                                         N             N                 N                

                       10        20        30        40        50        60        70        80        90     
AA:            VGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIG 500
PathogenicSAV:                                                 N                                                   
gnomAD_SAV:    L   KK     NHQ     DH                          T    AI      S GN   L   HSS T  LV         H       SF 
Conservation:  7724414282434435786412242325226634486783867666144323335444558652324121110111022153566988564765853243
SS_PSIPRED:    EEEEE  EEEEE                   EEEEEEEE  EEEEEE               HHHH              HH    HHHHHHHHHHHHH 
SS_SPIDER3:    EEEE    EEE                   EEEEEEEEE  EEEEEE      EE       HHHHH                   HHHHHHHHHHHHH 
SS_PSSPRED:    EEEEE   EEE                    EEEEEEE    EEEEE               HHH              HHHH   HHHHHHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                           DDD DD                         
DO_IUPRED2A:                                                                    DDDDDDDDDDDDD                      
DISULFID:                                                            C      C                    CC                
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60        70        80        90     
AA:            FSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT 600
gnomAD_SAV:        V         R  N I K         S    M                          L T N               T *  I I     I L 
Conservation:  8555659555745984525265855866212754354665545378635559676446685564456669565966646547856865565455354644
STMI:                                                                                              MMMMMMMMMMMMMMMM
SS_PSIPRED:     EEEEEEE       EE  EE   HHHHHH              HHEEEEE    EEE EEEEEEE                HHHHHHHHHHHHHHHHHH
SS_SPIDER3:     EEEEEEE       E   E     HHHH     EEE  EEE     EEEE     EEEEEEEEEEEE     HHHH     HHHHHHHHHHHHHHHHHH
SS_PSSPRED:     EEEEEEE                HHHHHHH            HHHHHHEE    EEEEEEEEEEEE               HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                               T    R                                                      
REGION:                                              SLT                                                           
CARBOHYD:                                                                          N                               

                       10        20        30        40        50        60        70        80        90     
AA:            VFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQR 700
PathogenicSAV:                                                                   I             I            R      
gnomAD_SAV:         H       GT   S G     L T                  A L        M                   S          A A   C   S
Conservation:  5638874764443437116313586477596657999779999667566757565644876799777999999776777777766659797799744632
STMI:          MMM                           IIIIIIIIIIIIIIIIIIII       MMMMMMMMMMMMMMMM                           
SS_PSIPRED:    HHHHHHH                     HHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EE        HHH  
SS_SPIDER3:    HHHHHHH                     HHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHH HHHHHHHHHH   E          H  
SS_PSSPRED:    HHHHHH                     EHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                 
DO_DISOPRED3:                                                                                               DD     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                      KSIWLLWALVFNNSVPVENP                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            PQEQYPPLKFGTVPNGSTEKNIRSNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWK 800
gnomAD_SAV:       E QS         A  R       Y      H   ALA    IH           Y    D   H N    F    A R         S     G  
Conservation:  5112547456668858665455345523671484446834856751465245554586656676655676697565666784568666784552436354
SS_PSIPRED:            EEE      HHHHHHHH HHHHHHHHHH    HHHHHHHHHH    EEEEEHHHHHHHHH      EEEE            EE        
SS_SPIDER3:            EEEEE     HHHHHH    HHHHHHH     HHHHHHHHH     EEHEEHHHHHHHH       EEEE   EEEE   EEEEE       
SS_PSSPRED:                     HHHHHHH   HHHHHHHHH    HHHHHHHHHH    EEEE HHHHHHHHHH     EEEE    EE    EEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                       D D
DO_IUPRED2A:           DDD         D                                                                               
BINDING:                                                                 D                                         
REGION:                        ST                                                                                  
DISULFID:                                                                              C                           
CARBOHYD:                    N                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            RPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHRMDFLLAFSRGMYSCCSAE 900
BenignSAV:                                                                                       I                 
gnomAD_SAV:    WL      *   N K  #  #Q       D          Y N      C    V C      V  Q   RHR   P  PQ I  P T#           
Conservation:  5335546844344543435443556535335445666559978999899999668664443465657545554732211212322753475755643222
STMI:                                                      MMMMMMMMMMMMMMMMMMMM                                    
SS_PSIPRED:     HHHHHHHHH    HHHHHHHHHHH                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHH    
SS_SPIDER3:     HHHHHHHH      HHHHHHHHH                 HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH H     HHHHHHHHHHH        
SS_PSSPRED:     HHHHHHHHH    HHHHHHHHHH                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHH        
DO_DISOPRED3:                                DDDDDDDDDD                                  DDDDDDDD            DDDDDD
DO_SPOTD:      DD          DDD             DDDDDDDDDDDDDDDDDDD       DDDDDDD              DDDDDDDDD         DDDDDDD
DO_IUPRED2A:                                                                                                      D
DISULFID:                                 C                                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            AAPPPAKPPPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLADGFHRYYGPIEPQGLGLGLGEARAAPRGAAGRPLSPPAAQPP 1000
BenignSAV:                          V                                                           P                  
gnomAD_SAV:     T  L      RR        V       T                                                                      
Conservation:  1111201211111212212131211310112101212223213211110121111011111111111111111111111110011111111112110120
SS_PSIPRED:                                       HHHHHH HH                                HHHHH                   
SS_SPIDER3:                                        HHHHHHH                                   HHH                   
SS_PSSPRED:                                          HHH                                                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDD         D DDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAP 1100
gnomAD_SAV:                      S   D                          L N #                                      AL      
Conservation:  1111111111011110420110101111111001111111203101111121112101000001000111111111111111100111001011111101
SS_PSIPRED:                                                                                                        
SS_SPIDER3:             H                                    E                                                     
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D

                       10        20        30        40        50        60        70        80        90     
AA:            PPCPYLDLEPSPSDSEDSESLGGASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAGSWDYLPPRSGPAAWHCRHCASLELLPPPRHLSCSHD 1200
BenignSAV:           E                                                                                             
gnomAD_SAV:     R    E    S N KN D  VDT   D #   Y       V   R R     #         R     T S        P  T                
Conservation:  1111111111121121021212111111111111111111023112121120011111121211111011212111200011111111110011111200
SS_PSIPRED:                                            HHHH                                         HHH            
SS_SPIDER3:                                    H                                                                   
SS_PSSPRED:                                                                                   HHH                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDD D                       D               D                            D     

                       10        20        30        40        50        60        70        80        90     
AA:            GLDGGWWAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGWDLPPPAPTSRSLEDLSSCPRAAPARRLTGPSRHARRCPHA 1300
gnomAD_SAV:                                            H                                           C V      VL     
Conservation:  1111111111111111111111111110120001111101011121011111111011211111111211000111221111011213101121110200
SS_PSIPRED:                       HHHHH                                               HHHH                         
SS_SPIDER3:                                                                           HHHH                        H
SS_PSSPRED:                       HHH                                                                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:          DDDDDDDD DDDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30      
AA:            AHWGPPLPTASHRRHRGGDLGTRRGSAHFSSLESEV 1336
BenignSAV:                     S                   
gnomAD_SAV:           L G     #S   R S         Q   
Conservation:  010211111111220111111111111111111111
SS_PSIPRED:                                        
SS_SPIDER3:    H          H                       E
SS_PSSPRED:                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MOTIF:                                          SEV
MODRES_P:                               S          
MODRES_M:                     R