O15504  NUP42_HUMAN

Gene name: NUP42   Description: Nucleoporin NUP42

Length: 423    GTS: 1.324e-06   GTS percentile: 0.366     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 219      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAICQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQQQPSGNNRRGWNTTSQRYSNVIQPSSFSKSTPWGGSRDQEKPYFSSFDSGASTNRKEGFGLSEN 100
gnomAD_SAV:     #V E  P  WYS RH  S   A V SG   W *LRR A D   H      *SD S     TV RF L#R    E E H CA#G  V ADT AV R T  
Conservation:  1010122235142353123204102242543111112212402322521122213323443243321131344301221313222312223111211122
SS_PSIPRED:          EE                                                                                            
SS_SPIDER3:        E       E                                                                                       
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D      DDDDDDDD DDDDD DDDDD      D  D  DDDD
ZN_FING:       MAICQFFLQGRCRFGDRCWNEHPGA                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            PFASLSPDEQKDEKKLLEGIVKDMEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRVNELKSLNISTK 200
gnomAD_SAV:    T    THY         A T   V*G #     V PI L     L T V  EV  #K S K R         GC    HH  S*#        R KT  E
Conservation:  3423011110122132360511742254255570573530222111438613253564443412122352341622252241124513515661231323
SS_PSIPRED:                HHHHHHHHHHHHHHHHH                          HHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHH  HHHH
SS_SPIDER3:            HHHHHHHHHHH H HHHHHH    EEEE                  HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHH   HHHH
SS_PSSPRED:                HHHHHHHHHH          EEEEE                 HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHH   HHHH
DO_DISOPRED3:  DDDDDDDDDDDDD                                                                                       
DO_SPOTD:      DDDDDDDDDDDDDD                                                        DDD                   DDDDDDDD
DO_IUPRED2A:   DDDDDDDDDD  DDDD                                D                                                   
MODRES_P:           S                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            VALLSDVKDGVNQAAPAFGFGSSQAATFMSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFGSSPAFGAAASTSSGISTSAPAFGFGKPEVTSAAS 300
gnomAD_SAV:        PA N RI    L     N# S I  LL L IS    G   KL V  K  YT    R   SY CCLV    V   *D       VR   A  ILT  
Conservation:  1233112321103123322211011124423494212112011125461112121223112131341030212055231013111221423211124532
SS_PSIPRED:    HHHHHHH                                                                                             
SS_SPIDER3:    HHHHHH                                                                                              
SS_PSSPRED:    HHHHHH                                                                                              
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FSFKSPAASSFGSPGFSGLPASLATGPVRAPVAPAFGGGSSVAGFGSPGSHSHTAFSKPSSDTFGNSSISTSLSASSSIIATDNVLFTPRDKLTVEELEQ 400
BenignSAV:                                                                                               NN        
gnomAD_SAV:      L  TSSF S   E   PA#   SR ISTL   GLE  TAGTS  ILD QF    P L G    S#   IY  G G SV I DM     G*      G 
Conservation:  5342211213243333534213143311113111233101221113121001022221221112401002121211110111020665310233145326
SS_PSIPRED:                                                                                             HHH  HHHHHH
SS_SPIDER3:                                                                                             HHH  HHHHHH
SS_PSSPRED:                                                                                                  HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              
DO_IUPRED2A:                                              D       DD  DDD                                          

                       10        20   
AA:            FQSKKFTLGKIPLKPPPLELLNV 423
gnomAD_SAV:    Y C T I #    TL S  FIK 
Conservation:  51344323427644765136602
SS_PSIPRED:    HH               HHH   
SS_SPIDER3:    H                HHH  E
SS_PSSPRED:    HH               HHH   
DO_DISOPRED3:                         
DO_SPOTD:                             
DO_IUPRED2A: