O43175  SERA_HUMAN

Gene name: PHGDH   Description: D-3-phosphoglycerate dehydrogenase

Length: 533    GTS: 2.614e-06   GTS percentile: 0.832     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 13      BenignSAV: 5      gnomAD_SAV: 298      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPN 100
BenignSAV:                                                                                                       R 
gnomAD_SAV:     T  D W L TGGG     G N *    H       G  DR  D H #    F#C#  G TN   T K PHM  KV   LVS    TT       L IR 
Conservation:  3201011223322111212101311132020020211222611122334544444446421353144025445658858565665334322644653563
SS_PSIPRED:           EEEE     HHHHHHHHH   EEEE     HHHHHHHH    EEEE       HHHHHHHH  EEEEE         HHHHHH EEEEEE   
SS_SPIDER3:           EEEEEE   HHHHHHHH    EEEE     HHHHHHHH    EEEE       HHHHHH   EEEEEE      HE HHHHHH  EEEEE   
SS_PSSPRED:           EEEE     HHHHHHHHH    EEEE    HHHHHHHHH   EEEEE      HHHHHHHHH  EEEE         HHHHHHH  EEEE   
DO_DISOPRED3:  DDDD                                                                                                
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                    T                      
MODRES_P:                   S                                                               T                      
MODRES_A:                          K                                    K                                          

                       10        20        30        40        50        60        70        80        90     
AA:            GNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLC 200
PathogenicSAV:                         M         W    R                      Q                                     
BenignSAV:                                                                                                       V 
gnomAD_SAV:         VT        S VSH A VMVLL  S# KQ R  RI #  RA RV  P  N SGI SWI P# LNST   A  A   LT  D#P QS      V 
Conservation:  7866675755645435669355551364427384644548265159665538586544465264455453665689454332533265353264445326
SS_PSIPRED:      HHHHHHHHHHHHHHHHH  HHHHHHHH     HHH EEEE    EEEEE   HHHHHHHHHHHH   EEEEE     HHHHHH   EEEEHHHHHHH 
SS_SPIDER3:      HHHHHHHHHHHHHHHH  HHHHHHHHH     HH    EE   EEEEEE   HHHHHHHHHHHH   EEEEE     HHHHHH   EEE HHHHHHH 
SS_PSSPRED:     HHHHHHHHHHHHHHHHHH  HHHHHHHHH           E    EEEEE    HHHHHHHHHHHH   EEEE     HHHHHHH   E  HHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                  D                                                                    
NP_BIND:                                                             RI                                            
BINDING:                                                                                 D                         

                       10        20        30        40        50        60        70        80        90     
AA:            DFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIA 300
PathogenicSAV:                                                             M   KL                   P              
BenignSAV:                                                    V                                                    
gnomAD_SAV:      F M S   TAM    K IP S  RNRMHMM   CR LMNK T  QD   SRR RTSV   M KL ##QSV EN      S# AVN   S* H V*D#S
Conservation:  5444585764448254554145545737634466655646773652257138345544544512664332185343476449586678069935643476
SS_PSIPRED:     EEEEE    HHH     HHHHHH    EEEEE        HHHHHHHHHH    EEEEEE                EEE       HHHHHHHHHHHHH
SS_SPIDER3:     EEEE     HHH     HHHHH     EEEEE        HHHHHHHHH   E EEEEEEE          H    EEE       HHHHHHHHHHHHH
SS_PSSPRED:     EEEEE            HHHHHH    EEEEEE       HHHHHHHHHH     EE                   EEE       HHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           D                           
NP_BIND:                                        CAR                                              HLGA              
BINDING:             T                                                    D                                        
ACT_SITE:                                         R                            E                 H                 

                       10        20        30        40        50        60        70        80        90     
AA:            VQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEA 400
PathogenicSAV:                                                                         T   S                       
BenignSAV:                                 S                                                                       
gnomAD_SAV:    A  MAL  A #F# FM  H   #   L SR#    G       Q    TL  A K    R A   SE   #LVLM SF  D  R E A         RDS
Conservation:  1745643244143535734253223332444551764447244321211302153623271142132223245322846110221114766851133463
SS_PSIPRED:    HHHHHHH               HHH HH   HHHHHHHHHHHHHHHH     EEEEEEE           HHHHHHHHHHHHH     EEE HHHHHHH 
SS_SPIDER3:    HHHHHHH        EE     HHH HHHHHHHHHHHHHHHHHHHHH     EEEEEEEE       HHHHHHHHHHHHHHH       E  HHHHHHH 
SS_PSSPRED:    HHHHHHHH         EE   HHHHHHH  HHHHHHHHHHHHHHHH     EEEEEEEEE          HHHHHHHHHHHHH     EE HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            GLNVTTSHSPAAPGEQGFGECLLAVALAGAPYQAVGLVQGTTPVLQGLNGAVFRPEVPLRRDLPLLLFRTQTSDPAMLPTMIGLLAEAGVRLLSYQTSLV 500
PathogenicSAV:                         M   V                                                            M          
BenignSAV:       S                                                                                                 
gnomAD_SAV:    D KAS  Y  T LE  D RK    M   R            M   H  SEG  SS    HGY T   CG HA GS T   ILRF T  DMW         
Conservation:  6306111501124210001131325231311213282533217262252352623253703224153412112031263232338321332523432510
SS_PSIPRED:      EEEEEE         EEEEEEEEEE   EEEEEEEEE    EEEEE  EEE           EEEEEE      HHHHHHHHHHH   EEEEEEE   
SS_SPIDER3:      EEEEEE         EEEEEEEEEE  EEEEEEEEE     EEEEE  EE            EEEEEE      HHHHHHHHHHH   EEEEEE EEE
SS_PSSPRED:      EEEEEE          EEEEEEEEE   EEEEEEEEE    EEEEE   EEEE         EEEEEE      HHHHHHHHHHHH  EEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DDDDDD                                                                                         

                       10        20        30   
AA:            SDGETWHVMGISSLLPSLEAWKQHVTEAFQFHF 533
gnomAD_SAV:     NR I* L D A   H V E       V * R 
Conservation:  025424144444226136113221414423403
SS_PSIPRED:        EEEEEEE      HHHHHHHHEEEEE   
SS_SPIDER3:       EEEEEEEE      HHHHHHHH HH     
SS_PSSPRED:        EEEEEEE      HHHHHHHHHHHHHHH 
DO_DISOPRED3:                                   
DO_SPOTD:                                       
DO_IUPRED2A: