O43300  LRRT2_HUMAN

Gene name: LRRTM2   Description: Leucine-rich repeat transmembrane neuronal protein 2

Length: 516    GTS: 1.038e-06   GTS percentile: 0.242     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 190      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGLHFKWPLGAPMLAAIYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTV 100
gnomAD_SAV:         T   RS T     VT # # T      V     H       GN H       TP NSF   F TQ R KD #THEY GCT   R Q  D HL   
Conservation:  2222222211203122222323142233125342235245646324262222226545322352344233353445535443754257044544153114
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                   
SS_PSIPRED:           HH  HHHHHHHHHHHHHHHHHHH        EEE  EEE                  EEE           HH        EEE         
SS_SPIDER3:               HHHHHHHHHHHHHHHHHH         EEE  EEEE      E          EEE       E    H        EEE       EE
SS_PSSPRED:               HHHHHHHHHHHHHH HHH         EE   EEEEE                 E           HHHHH      EEE         
DO_DISOPRED3:  BBBDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_SPOTD:      DDDDD        DDDDDDDDD                                                                              
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                              N                                           

                       10        20        30        40        50        60        70        80        90     
AA:            KEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG 200
gnomAD_SAV:     D V            R  N    TT     Q    D H  L       AG         I   C    #  L       CN   PV  K H *N  H A
Conservation:  2344512532424335233423622572543844325412560242242232311534414222222451113316336422840346646234415423
SS_PSIPRED:                EEE                     EEE                     EEE                     EEE             
SS_SPIDER3:       H        EEE                     EEE    E  E    HH       EEE    E  E             EEE       E     
SS_PSSPRED:                EEE                      EE          HHHHH      EEE          HHHH                    HHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                               N                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            FAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
gnomAD_SAV:          MKD    Q RP   K V   W N   MR  RR   #   R   R        V  A    G H   V M  T  T R GI    # E  T    
Conservation:  2226333224263535425222532255255254325322762445432200100011325405422432222211433243012411343653454333
SS_PSIPRED:            EEE                     EEE                     EEE                     EEE            HHH  
SS_SPIDER3:            EEE            H        EEE    E  E             EEE       EE  HH        EEE       H   HHH   
SS_PSSPRED:    H       EEE          HHHH       EEE           HHHHHHHH  EE                      EEE          HHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                N                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            RSLTTVGLSGNLWECSARICALASWLGSFQGRWEHSILCHSPDHTQGEDILDAVHGFQLCWNLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTT 400
gnomAD_SAV:    K#       D  *  #TQV       SG  DQ  R  P YN  N  E Y                    T    I TIIKH I  R    D       P 
Conservation:  5443442432443545334366545524341333343233244132222233231423331232122232212312331232121432201144642536
SS_PSIPRED:        EEE           HHHHHHHHHH              HHH    HHHH HHHH         EE              EE               
SS_SPIDER3:        EEEE      E   HHHHHHHHHH     EE EEE   HHH   EHHH  H                                             
SS_PSSPRED:        EEE          HHHHHHHHHHHH   EE        HHH    HHH                                                
DO_DISOPRED3:                                                                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                    DDD     DDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                   N                                      

                       10        20        30        40        50        60        70        80        90     
AA:            AGIAVTTEEHFPEPDNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMVQNHRQLRSQTRLHMSNMSDQGPYNEYEPTHEGPFIIING 500
gnomAD_SAV:     S TA SKQ     E  V   Q  M  I   LP   M  L  T  Q   S  K   H  # RH G FQ  IQRR   V H  R    *  N         
Conservation:  3665745525344334735743741242293122222535443144212245225622352244768664556365565547665332555265428432
STMI:                                MMMMMMMMMMMMMMMMMMMMM                                                         
SS_PSIPRED:                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHH HHHHHHHHHHHHHHHH                     EEE  
SS_SPIDER3:                      HHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHH        H   HHH             E         EEE  
SS_PSSPRED:                        HHHHHHHHHHHHHHHHHHHHHHHEE    HHHHHHHHHHHHHHHHHHHHHHHHH                    EEEE  
DO_DISOPRED3:  DDDDDDDDDDDDDDD                                              DDDDDDDDDDDDDDDD                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                    
DO_IUPRED2A:     DDDD                                                                DDDDDD DDDDDDDDD              

                       10      
AA:            YGQCKCQQLPYKECEV 516
gnomAD_SAV:         Y   T      
Conservation:  4542432255523543
SS_PSIPRED:         EEE        
SS_SPIDER3:     E EEEEE   EE   
SS_PSSPRED:       EEE          
DO_DISOPRED3:                 B
DO_SPOTD:                      
DO_IUPRED2A:                   
MOTIF:                     ECEV