O60260  PRKN_HUMAN

Gene name: PRKN   Description: E3 ubiquitin-protein ligase parkin

Length: 465    GTS: 3.481e-06   GTS percentile: 0.953     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 31      BenignSAV: 14      gnomAD_SAV: 324      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQRPWRKGQEMNATGGDDPRNAAGGCEREPQ 100
PathogenicSAV: #             M                 Q   L    P   P         E                         E         V        
BenignSAV:                                      R           T                                                     H
gnomAD_SAV:    VM   # TA     #  N  NGT *  G DDT*R ILVG FH L S   VWHE* EE     #PN   VG *# K  PQI VA  NNLS TVR#Y L HH
Conservation:  6145433342243345111222312332133121422121525344524513111322554146534665213011110000211110001001002211
SS_PSIPRED:     EEEEEE     EEEEE     HHHHHHHHHHHH   HHHEEEEE         EEEE      EEEEEEE                HHH          
SS_SPIDER3:     EEEEEE     EEEEE     HHHHHHHHHHHH   HHHEEEEEE  E    EEEEE      EEEEEEE                             
SS_PSSPRED:     EEEEEE     EEEEE     HHHHHHHHHHHH   HHHEEEEE   E     EEEE       EEEEEE                             
DO_DISOPRED3:  D                                                                          DDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                               DDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                      S                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SLTRVDLSSSVLPGDSVGLAVILHTDSRKDSPPAGSPAGRSIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGPSCWDDVLIPNRMSGECQSPH 200
PathogenicSAV:                                                             N                                       
BenignSAV:                                                         R             N                        L        
gnomAD_SAV:       Q VVTN     N LRM  N          LVR    S MC R HEHY  R  TM L #FKIHRNISK  P IF#RD PR V#   SDQL D    L 
Conservation:  2533344221132203135312511111001011101201203225454541151142235344471162434437256974556631223418285311
SS_PSIPRED:                       EEE                        EEEE        HHHHEEEE    HHHHHHH     HHEEE        EE   
SS_SPIDER3:       E                EE                         EE       E HHHHHHHHHHHHHHHHHH      HEEE     EEEEEE   
SS_PSSPRED:                        EEE                      EEEE          HHHHHHHHHHHHHHHHHH      EEE              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                            
DO_IUPRED2A:        DDD              DDDDDDDDDDDDDDD                                                               
ZN_FING:                                               SIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGPSCWDDVLIPNRMSGECQSPH

                       10        20        30        40        50        60        70        80        90     
AA:            CPGTSAEFFFKCGAHPTSDKETSVALHLIATNSRNITCITCTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE 300
PathogenicSAV:           NY                           #            Y  C                  W    N   R    G           
BenignSAV:                                                    I                      SI                            
gnomAD_SAV:    *  SNVQ   EY TQ  C R K AS    VK  Q  PW#M INIMR I    WS CQLV   S YSH#  KFSGQ   #NR PR CVH  T # TY T Q
Conservation:  6171045544744344323232543728431624154653743211235323711556566355233221341454432421335433434662345545
SS_PSIPRED:         HHHHHH                         EE          EEEE     EE HHHHHHHHHHHHH    EE                    H
SS_SPIDER3:          HHHHH                         E          HHEEE     HHHHHHHHHHHHHHHH    EE      E E           H
SS_PSSPRED:        HHHHHHHH            HHH            EE       EEEE     E HHHHHHHHHHHHHH                          H
DO_DISOPRED3:                       DDDD  D                                                                        
DO_SPOTD:                       DDDDDDDDDD                                                                         
DO_IUPRED2A:                                                                                                       
METAL:                                              C  C           C   H  C  C                         C   C       
ZN_FING:       CPGTSAEFFFKCGAHPTSDKETSVA            CITCTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGC       

                       10        20        30        40        50        60        70        80        90     
AA:            LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDERAAEQ 400
PathogenicSAV:                            E                      P                                                 
BenignSAV:                                      C    S                          W             L             N      
gnomAD_SAV:    #RY  L  *D C W P CS D  A  T #L  LC  Y VE  L  A     WKEC VPD   #C WG   V   W  G I     AAI D#  GGG TK 
Conservation:  3865635733862685256665468124533451433312323222133508311233543333412433134321301000222011323132205313
SS_PSIPRED:    HHHHH   HHHHHHHHHHHHHHHHHH   EE        EEE                    EE             HHHHHH     HHH   HHHHHH
SS_SPIDER3:    HHHHHH  HHHHHHHHHHHHHHHHHH   EE       EEEEE     EEEEE  E     EEE      E       HHHHH     HHH   HHHHHH
SS_PSSPRED:    HHHHHH  HHHHHHHHHHHHHHHHHH   EE        EEE       EEEE         EEE             HHHHHH     HHHH HHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                              D        
METAL:                                        C    C              C       C    C  C    H   C                       
ZN_FING:                   NRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGEC                       

                       10        20        30        40        50        60     
AA:            ARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV 465
PathogenicSAV:  C            N  R           DF  T  L   R                        
gnomAD_SAV:    GLC   PR  N   N   R# R  A  HED # VT T  RRS Q  R  SRK DHI LE Y   G
Conservation:  44742233114123534481413633424442351531324123442142115331243043211
SS_PSIPRED:    HHHHHHHHHHHHHH          EEE       EE       EEE                   
SS_SPIDER3:    HHHHHHHHHHHHHH  E       EEE   E EEEE       EE                    
SS_PSSPRED:    HHHHHHHHHHHHHH          EEE                HHHHH                 
DO_DISOPRED3:                                                                   
DO_SPOTD:                                                                       
DO_IUPRED2A:      DDDD                                                          
METAL:                          C  C              C    C    C  C       C   H    
ZN_FING:                        CPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNC                
ACT_SITE:                                    C