O60294  TYW4_HUMAN

Gene name: LCMT2   Description: tRNA wybutosine-synthesizing protein 4

Length: 686    GTS: 2.601e-06   GTS percentile: 0.829     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 508      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGPRSRERRAGAVQNTNDSSALSKRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVRHCVRAFLEQIGAPQAALRAQILSLGAGFDSLYFRLK 100
BenignSAV:                                                                       L                                 
gnomAD_SAV:    #S Q C  P RPL# I  G SFN  F P   *M#N#L S#V #AVV GPQPT GS #LP GVLSNYL#TI DPVSVH# V CP#SS#FDSALH*P   * 
Conservation:  4111110111113312222222331212113221313210221201322322126433333221314115200202111111234656858444336542
SS_PSIPRED:         HHHHHHHHH HHHHHHHHHHHHHH      HHHHHH          HHHHHHHHHHHHHHHHHHHHHHH   HHH  EEEEEE     HHHHHHH
SS_SPIDER3:         HHHHHHHHH   HHHHHHHHHHHH      HHHHH          HH HHHHHHHHHHHHHHHHHHHHH    H  EEEEEE        EEEEE
SS_PSSPRED:         HHHHHHHHHH  HHHHHHHHHHHHH     HHHHHH          HHHHHHHHHHHHHHHHHHHHHHH        EEEEE       HHHHHH
DO_DISOPRED3:  DDDDDDD D                                                                                           
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:   DDDDDDDDDDDDDDDDD                                                                                   
BINDING:                                                                 R                             G           

                       10        20        30        40        50        60        70        80        90     
AA:            TAGRLARAAVWEVDFPDVARRKAERIGETPELCALTGPFERGEPASALCFESADYCILGLDLRQLQRVEEALGAAGLDAASPTLLLAEAVLTYLEPESAA 200
BenignSAV:                                             S       Y                                                   
gnomAD_SAV:       HV G  F G G R MV   T  T  MAK GT###TV#SRD#  V  V  TYS      VGR  Q  ASMS  E EGP    IV   M  S K#A T#
Conservation:  2040501323466665373126324511000611122101001100231303038277738532202521460165411116744556569375321272
SS_PSIPRED:           EEEEE   HHHHHHHHHHHH  HHHHHH             EEE   EEEEEE    HHHHHHHHHH        EEEEEEEEEE   HHHHH
SS_SPIDER3:           EEEEEE  HHHHHHHHHHHH  HHHH               E E   EEEEEE    HHHHHHHHHH        EEEEEEEEEEE  HHHHH
SS_PSSPRED:    H      EEEEEE HHHHHHHHHHHHH  HHHHHH                    EEEE     HHHHHHHHHHH       HHHHHHHHHHH  HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                    D                                                                         E            
REGION:                                                                    DL                                      

                       10        20        30        40        50        60        70        80        90     
AA:            ALIAWAAQRFPNALFVVYEQMRPQDAFGQFMLQHFRQLNSPLHGLERFPDVEAQRRRFLQAGWTACGAVDMNEFYHCFLPAEERRRVENIEPFDEFEEWH 300
gnomAD_SAV:     R #   RH SSSP   C *L L V  SEL#        #L R   #L EM V#WC#LP#TRRSTY  LALY*#C   FAG  GQGG  # R   Y  *N
Conservation:  4461956227314185488931817588248328814435373551158311562186411892161337661751245311941444169599669656
SS_PSIPRED:    HHHHHHHHH   EEEEEE       HHHHHHHHHHHH       HHH   HHHHHHHHHHH     EEEEHHHHHHH   HHHHHHHH      HHHHHH
SS_SPIDER3:    HHHHHHHHH   EEEEEEEE     HHHHHHHHHHHH       HH    HHHHHHHHHH    EEEEEEHHHHHH    HHHHHHHH      HHHHHH
SS_PSSPRED:    HHHHHHHHH   EEEEEEE      HHHHHHHHHHHHH            HHHHHHHHHHH   EEEE  HHHHHHHH  HHHHHHHHH      HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LKCAHYFILAASRGDTLSHTLVFPSSEAFPRVNPASPSGVFPASVVSSEGQVPNLKRYGHASVFLSPDVILSAGGFGEQEGRHCRVSQFHLLSRDCDSEW 400
gnomAD_SAV:      YS   T V  GE#SF #   L F   LSH SLD S R   TI  IRK      R*C QV L  N  I  GV # E # #W  *MTH D      GAK 
Conservation:  3564585643642610011220231012210002000011325133100100214434663632314215544989943154349210223625101119
SS_PSIPRED:    HHHHHHHEEEEE                              EEEEE         EEE EEEEE   EEEEEE             EEEEEE      E
SS_SPIDER3:    HHHH HEEEHEE                              EEEEE          EEEEEEE    EEEEEEE        EEEEEEEEEE      E
SS_PSSPRED:    HHHHHHHHHHEE                              EEEEE              EEE    EEEEE             EEEEEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KGSQIGSCGTGVQWDGRLYHTMTRLSESRVLVLGGRLSPVSPALGVLQLHFFKSEDNNTEDLKVTITKAGRKDDSTLCCWRHSTTEVSCQNQEYLFVYGG 500
gnomAD_SAV:     R #VST   V K   SF    AG  ANWI#FM RI   # #     E      D#D IAN# #S AN   R  #I*SS #R #R    R    VC   C
Conservation:  2101311102100243544663424232145438973993242122225110101101100104121220112011125653344130213415555678
SS_PSIPRED:    E               EEEEEEEEE   EEEEE             EEEEE           EEEEE  EE           EEEEEEE    EEEEE  
SS_SPIDER3:    E EEEE          EEEEEEEEE   EEEEEEE           EEEEEE          EEEEEE EE            EEEEE     EEEEEE 
SS_PSSPRED:                      EEEEE     EEEEE            EEEEEE           EEEE                 EEEEEE    EEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DDDD                                  

                       10        20        30        40        50        60        70        80        90     
AA:            RSVVEPVLSDWHFLHVGTMAWVRIPVEGEVPEARHSHSACTWQGGALIAGGLGASEEPLNSVLFLRPISCGFLWESVDIQPPITPRYSHTAHVLNGKLLL 600
BenignSAV:                      A                                                                                  
gnomAD_SAV:    * #M#  V      R  AVP   #LL EKELKSQ    S I  E  VT R#PR A  S   L   T V    #CKP A#*S#   G A      #    M
Conservation:  4421215516119823211132143419128237566557232464643685210516635313624111680931413274436655645842243745
SS_PSIPRED:              EEEEE    EEEE              EEEEE  EEEEE            EEEEEEE   EEEEEEE           EEEEE  EEEE
SS_SPIDER3:          EE  EEEEE    EEEEEE E       EEEEEEEE  EEEEE  E     E   EEEEEEE    EEEEEEE       EEEEEEEE  EEEE
SS_PSSPRED:             EEEEEE    EEEEEEE           EEEEE   EEEE            EEEEEEE    EEEEEE          EEEEEE  EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80      
AA:            VGGIWIHSSSFPGVTVINLTTGLSSEYQIDTTYVPWPLMLHNHTSILLPEEQQLLLLGGGGNCFSFGTYFNPHTVTLDLSSLSAGQ 686
gnomAD_SAV:    A E   L P  LE #L S S  MN    TN A     V   KRAC  IR   #    R  R       #Y# NR   NF FV V E
Conservation:  58764423124855445361430316305431145586656354744413212344369876876758538113504251131000
SS_PSIPRED:    EE EE         EEEE     EEEEE          EEE  EEEEE    EEEEEE         EE    EEEEE HH     
SS_SPIDER3:    EE E          EEEE    EEEEEE         EEEE  EEEEE    EEEEEE               EEEEE HH     
SS_PSSPRED:    EE           EEEEE     EEEEE          EEEE          EEEEEE   EE          EEEEE        
DO_DISOPRED3:                                                                                     DDD
DO_SPOTD:                                                                                         DDD
DO_IUPRED2A: