O60330  PCDGC_HUMAN

Gene name: PCDHGA12   Description: Protocadherin gamma-A12

Length: 932    GTS: 1.893e-06   GTS percentile: 0.616     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 568      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAI 100
gnomAD_SAV:    T   Q  #    FAM  VF R  RD RRIRTH AI K Q      S T  ARRV H K#  PVG    GS MR L# S   DGF #   V P   YT#T 
Conservation:  1100001111111001111001000010213272428731153156443256342111510423542211111431421126151413458971591112
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:              HHHHHHHHHHHHHHHHHHH      HHH        HHHHH    HHHHHH  EEEE     EEEEE     EEEE     HHHHH    
SS_SPIDER3:           H  HHHHHHHHHHHHHHHH     E E         EE  HHHH    HHHHHH   EEE     EEEEE     EEEE   E HHHH     
SS_PSSPRED:       HHH     HHHHHHHHHHHHHHH                 EE HHHHH    HHHHHH   EEE     EEEEE     EEE      HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDBBBDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDD                                                                                            
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KCQLNLDILMEDKVKIYGVEVEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPELVLKRAL 200
gnomAD_SAV:            MT    TT  AD  AG VK  #HC PQ K Q  VGGYS  V  L   QP NL    S VH CQFR       VGE  TECT F#QM   CSV
Conservation:  2924114433423333313152619599629090010113351924116114151170919340535328051030261511011113132246362115
SS_PSIPRED:     EEEEEEEEEE   EEEEEEEEEE          HHHEEEEEE                         EEE      EEEEEEE       EEEHH    
SS_SPIDER3:    EEEEEEEEEEE    EEEEEEEEEE       E   EEEEEEEEE     E E               EEE      EEEEEEE     EEEEEEE    
SS_PSSPRED:     EEEE EEEEE  EEEEEEEEEEEE            EEEEEEE                                 EEEEEEE       HHHHHH HH
DO_DISOPRED3:                                                               D                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   D   D                               

                       10        20        30        40        50        60        70        80        90     
AA:            DREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
gnomAD_SAV:    G#   VVY   FR  EV NRM#P  #LN LLI VVKHKTTS    AHH N##Q PTW A  #IIIG   EKR IE  K F W* YG V ## E N   E 
Conservation:  8481110205252618571614452306061628377517171312823140953113304315291919041431518041201110002505400181
SS_PSIPRED:       HHHHEEEEEEEEE       EEEEEEEEEE            EEEEE         EEEEEEEE       EEEEEEEE   HHHHH EEE     E
SS_SPIDER3:          EEEEEEEEEE     EEEEEEEEEEEE            EEEEEE        EEEEEE         EEEEEEEE   HHHHHHEEE     E
SS_PSSPRED:    HHHHHHHHHHHHHHE         EEEEEEEEEE           EEEEEE       EEEEEEE         EEEEEEEE   HHHHHHH        
DO_DISOPRED3:                                             D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:            DDDDDD D                         DDDD                                                      
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGN 400
gnomAD_SAV:      ITRKW     # H R G  K       #       V L  KTSD         AA     W   T  S    V  KK RM  L  RD T         
Conservation:  5140204858101032406152912321313242525192897191403242111517321133244443619184216313041411113715123113
SS_PSIPRED:    EEE          EEEEEEEEE     EEEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE    
SS_SPIDER3:    EEEE         EEEEEEEEE     EEEEEEEEEEEE       EEEEE             EEEEEEEE        EEEEEE     EEEEE    
SS_PSSPRED:    EEE           EEEEEEEE      EEEEEEEEEEEEE    EEEEEE           HHHHHHHH           EEEEE      EEEE    
DO_DISOPRED3:                                           D  DDDDD  D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                   D DDDD            DDDDD                             

                       10        20        30        40        50        60        70        80        90     
AA:            YYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGAS 500
gnomAD_SAV:     *  F GV#   KHIL#CSVR     G#     #VPRT R  TEA H LLFLH#GCF       SS E FPLCG SR LNFG*SD FA P  K  M A  
Conservation:  4525241105798003144444242808152422110405163839762915010160314097613513422417091812145252524110011202
SS_PSIPRED:     EEEEE            EEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE        EEEEEEE        
SS_SPIDER3:    EEEEEE      H      EEEEEEE        EEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEEE EE  EE
SS_PSSPRED:    EEEEE              EEEEEE         EEEEEEEEE             EEEEE        EEEEEEE         EEEEEEE        
DO_DISOPRED3:                                                DDD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                      DDDDDDDDDD DDDDDDDDDDD DDDD      DDDDDD           DDDDDDD       DD DD            
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
gnomAD_SAV:      T G#VS E RAR V    NH RV* FE   #   #R  L   KL S  LL     SESK PCSVH    #SV#   S# T  V       #A  YC P
Conservation:  3312444324581513303664511114030514173915342333241406172784162584511212322114335235213345555644817453
SS_PSIPRED:     EEEEEEE     EEEEE    HHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    H
SS_SPIDER3:     EEEEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE         EEEE E        EEEEEEEE     
SS_PSSPRED:      EEEEEE    HHHHHHH  HHHHHHHHEEEEEEE        EEEEEEEEEE                    E           EEEEEEEEE     
DO_DISOPRED3:                                            D                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 D D  DD                         DDDD       DDDDD                      
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAV 700
gnomAD_SAV:    # R   HQF# R   H A  Q    LCMEG  M G P  *NF E  HNQSL    T LM   S P#I  E  E  S F   VDPKNP  AV   IV STI
Conservation:  7577551423245324714414485524151314362236363424243613345342252434231323222221211010111121342364465325
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:    HHHHHHH         EEE       EEHHHHHHHHH   EEEEEEEE      EEEEEEEEEEE  HHHHHHH               HHHHHHHHHHH
SS_SPIDER3:    HHHHHHHH H      EEE      EEEEEH         EEEEEEEE  E   EEEEEEEEEEE  HHHHH               HHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHH      EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE  HHHHHHHH              HHHHHHHHHHH
DO_DISOPRED3:                                                                         DDDDDDDDDDD D                
DO_SPOTD:                                                                                    DD                    
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SCVFLAFVILLLALRLRRWHKSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLLLSGDSVFS 800
gnomAD_SAV:     #F MS   V  EH QWL    G     E #  EVQE Q  DA#RMRTV K  F  FFVA EL QIRP #   ICE I I   T   # L      *   
Conservation:  5223324322332243222112111112100111122323243232154231324423242452133222122101223010110100110100100010
STMI:          MMMMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH  HHHHH                          EEEEEEE        EE                               
SS_SPIDER3:    HHHHHHHHHHHHHH   H   HHHHH             E            EEEEEEE        EE        HHH           E        
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH   HHHHHHH                          EEEE                                          
DO_DISOPRED3:                                                                               DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                        DDDDDDDDD  DDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
gnomAD_SAV:        R T*K L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH H     LD 
Conservation:  0011111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:                                                HHHHHHHHHHHHHHHHH                                       
SS_SPIDER3:                                                HHHHHHHHHHHHHHH                  E                 E    
SS_PSSPRED:                                                HHHHHHHHHHHHHH                                          
DO_DISOPRED3:  DDDDDDDD      D  DDDDDDDDDDDDDDDDD                                                                  
DO_SPOTD:      DDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDD     DDDDDDD        DDDDDDDDD                                  
DO_IUPRED2A:      DD    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     D    DD   DDDDDDDDDDDDDDDD DDDDDDDDDDD D DDDDDDDDDDD

                       10        20        30  
AA:            NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
gnomAD_SAV:    S     TV  Q A   E   S    L     *
Conservation:  11111111111111111111111111111111
SS_PSIPRED:                                    
SS_SPIDER3:      H                             
SS_PSSPRED:     HHH                            
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:       DD DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD