O60341  KDM1A_HUMAN

Gene name: KDM1A   Description: Lysine-specific histone demethylase 1A

Length: 852    GTS: 6.976e-07   GTS percentile: 0.103     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 4            gnomAD_SAV: 165      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETG 100
gnomAD_SAV:           VVVTVT   G                            S                  L                    S A L    AT    
Conservation:  3001111110100201110000001444200111244444444444444444314444131452203215201010120011144444444444311103
SS_PSIPRED:       HHHHHHHHHHHHHHHH                                                                                 
SS_SPIDER3:         HH   HH                                                                                        
SS_PSSPRED:       HHHHHHHHHHHHHHHH                                                                                 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                T                                         

                       10        20        30        40        50        60        70        80        90     
AA:            IAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDII 200
gnomAD_SAV:     T                                           DR  Q L        V      S   WD            H           ##T
Conservation:  4222222221221100299999977777777799979757777577345544399755929972797779949579997979777999999975779979
SS_PSIPRED:               HHH  HHHHH   HHHH   HHHH  HHHHH HHHHH                         HHHHHHH         HHHHHH     
SS_SPIDER3:                HH   HH       H    H     HHHHHHHHHH                          HHHHHHH    HHH  HHHH       
SS_PSSPRED:               HHHHHHHHHHH                HHH    HHH                         HHHHHHHH        HHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                        
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
MODRES_P:         T                     S    S   Y S                            S                                  

                       10        20        30        40        50        60        70        80        90     
AA:            SGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSF 300
gnomAD_SAV:    G   H   I  L   H               #        S# GN      I G         V MC    H L     R               H  N 
Conservation:  4757479979779999979799979959977925299975757794577995979999797799979995997947779999799599799779799999
SS_PSIPRED:          HHHHHHHHHHHHHHHHH       HHHHHHH         HHHHHHHHHHHH   EEEEE              EEEE   HHHHHHHHHHHH 
SS_SPIDER3:       HHHHHHHHHHH HHHHHHHH   EEE HHHHHHH        HHHHHHHHHHHHH   EEEEEEE           EEEEEEE HHHHHHHHHHHH 
SS_PSSPRED:          HHHHHHHHHHHHHHHHH       HHHHHHHHH       HHHHHHHHHHHHH                     EEEEE  HHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                               S           

                       10        20        30        40        50        60        70        80        90     
AA:            GMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNV 400
PathogenicSAV:                                                                           G   K                     
gnomAD_SAV:      G     V  #    I          #             V     E ST        S  H  SR                Q      H       S 
Conservation:  9999757957597979999999979979977777799777775955777777797779777757779749999999997777977779997999779774
SS_PSIPRED:       EEEE         EEEE    EEEE   EEEE     HHHHHHHHH   EEE      EE        HHHHHHHHHHHHHHHHHHHHHHHH    H
SS_SPIDER3:       EEEEE       EEEEEEE  EEEEE EEEE      HHHHHHHHH  EEEE      EE     E  HHHHHHHHHHHHHHHHHHHHHHHH    H
SS_PSSPRED:       EEEEE        EE       EE     EEE     HHHHHHHHH            EE        HHHHHHHHHHHHHHHHHHHHHHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                     D   D  D                          
NP_BIND:                                      MV                                                                   
BINDING:              E R     R                                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            LNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAET 500
gnomAD_SAV:     #   G                          M    E    D       W  #M D L      CG     H               S           
Conservation:  9999979799977997777799797997577579979977975495777235575575977499947997977997999797747797557955929372
SS_PSIPRED:    H      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHHHHHHH 
SS_SPIDER3:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHH HHHHHH
SS_PSSPRED:           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                             DDDDDDDDDDDDDDDDDD DDD                                   
DO_SPOTD:                                                                    DDDDD                                 
DO_IUPRED2A:                                                                DD  DD                                 

                       10        20        30        40        50        60        70        80        90     
AA:            QGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC 600
PathogenicSAV:                                                        G                                            
gnomAD_SAV:          N  D  V   G I P              R        *I              I          L   M    S           IC M    
Conservation:  7497997999999997757977999999999997797977777777777999999999999999999999999999999999999999999999997999
SS_PSIPRED:       HHHHHHHHHH         HHHHHHHHHHHHHHHHHH   HHH                          HHHHHHH          EEEEEE     
SS_SPIDER3:       HHHHHHHHHH         HHHHHHHHHHHHHHHHH    HHH                          HHHHHHH         EEEEEEE     
SS_PSSPRED:    HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHH                                HHHHHHHH        EEEEEEE    E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:       DDDDDD    D                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKA 700
gnomAD_SAV:        MS H M   Y    N#              #V#  A     *  #V H               #          W    M     D     I    
Conservation:  9999779995799799999999999999979999599999999999977979999999999979999777777577977779977777997797779977
SS_PSIPRED:    EEEEEE EE    EEEE  EEEE   HHHHH      EE     HHHHHHHHHH      EEEEEE          EEEE        EEEEEEEE    
SS_SPIDER3:    EEEEEEEEE    EEEEE EEEEEEEHHHH      E E     HHHHHHHHH       EEEEEE        EEEEEEE      EEEEEEEEE    
SS_PSSPRED:    EEEEE  E     EEEE  EEEEE  HHHH      EE      HHHHHHHHHH      EEEEE           EEEE      HHHHEE EE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                S                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            PILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAG 800
PathogenicSAV:                                                             H                                       
gnomAD_SAV:          M     A    V  N     *   R     G  L   R       CV         C                V   SL T T *L  #   V 
Conservation:  9595997755755557777777799977777797775759799999997999999999999999999999999977777557777799477577797777
SS_PSIPRED:     EEEEEEHHHHHHHHH   HHHHHHHHHHHHHHHH         EEEE                     HHHHHHH                  EEEEE 
SS_SPIDER3:     EEEEEE  HHHHHH    HHHHHHHHHHHHHHHH         EEEE        H            HHHHHHH                  EEEE  
SS_PSSPRED:     EEEEEEHHHHHHHHHH  HHHHHHHHHHHHHHHH         EEEE                     HHHHHHH                  EEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                   DD DDD              

                       10        20        30        40        50  
AA:            EHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM 852
gnomAD_SAV:        #        P                  V M  # T   F  L   GI
Conservation:  9979777777797775777775555455555435424553432231754322
SS_PSIPRED:            HHHHHHHHHHHHHHHHHHHHH                       
SS_SPIDER3:           HHHHHHHHHHHHHHHHHHHHHH                       
SS_PSSPRED:              HHHHHHHHHHHHHHHHHHHH                      
DO_DISOPRED3:                                      DDDDDDDDDDDDDDDD
DO_SPOTD:                                          DDDDDDDDDDDDDDDD
DO_IUPRED2A:                                          DDDDDDDDDDDDD
NP_BIND:                TV                                         
BINDING:       E                                                   
MODRES_P:                                                      S