O60500  NPHN_HUMAN

Gene name: NPHS1   Description: Nephrin

Length: 1241    GTS: 2.117e-06   GTS percentile: 0.694     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 79      BenignSAV: 16      gnomAD_SAV: 715      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MALGTTLRASLLLLGLLTEGLAQLAIPASVPRGFWALPENLTVVEGASVELRCGVSTPGSAVQWAKDGLLLGPDPRIPGFPRYRLEGDPARGEFHLHIEA 100
PathogenicSAV:                                                                S                               V    
gnomAD_SAV:      MEMMR TP P  RV     V  V  P I # #*T  K PMAGD T  # C EL    NVA SD G  I  SN T L  R C#  E# V#   Y LVKT
Conservation:  1223110010011001100121010012112525313825254138414252825123261568485853646221554456635274215954472611
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:          EEEEEEEE    EEEEEEEEEE     EEE    EEEE    EEEE        EEEEEE  EE            EE         EEEEE  
SS_SPIDER3:           EEEEEEE    EEEEEEEEEEE   EEE     EEEE    EEEEEE      EEEEEE  EE            EEEEE      EEEEEE 
SS_PSSPRED:        EEEEEEEEEE    EEEEEEEEEEE    EEE    EEEE   EEEEEEE      EEEEEE                  E        EEEEEE 
DO_DISOPRED3:  D                                                                                                   
DO_SPOTD:      DDD                                                                                                 
DO_IUPRED2A:                                                                                    DD                 
DISULFID:                                                          C                                               
CARBOHYD:                                             N                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            CDLSDDAEYECQVGRSEMGPELVSPRVILSILVPPKLLLLTPEAGTMVTWVAGQEYVVNCVSGDAKPAPDITILLSGQTISDISANVNEGSQQKLFTVEA 200
PathogenicSAV:     N #                                                    S      L   N N             MIK           
BenignSAV:                     K                                                                                   
gnomAD_SAV:      FR YT H    SL QL T  M  GAFP    S R      VT  #      K  A S  T  # SE # N   N RKMT     MIKVY*    S QV
Conservation:  2283965165885544314135481131455568731514133243134966922715292416779263625144401423222122388236723425
SS_PSIPRED:      HHH EEEEEEEE       EEE EEEEEEE     EE       EEEEE   EEEEEEE        EEEEEE  EE              EEEE  E
SS_SPIDER3:      HHH EEEEEEEE       EEE EEEEEEEE  EEE        EEEEE   EEEEEEE        EEEEEE  EEE  EE EE     EEEEEEEE
SS_PSSPRED:          EEEEEEEE       EEEEEEEEEEE              EEEEE   EEEEEEE        EEEEE   EEE             EEEE EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 D                                                                                  DDD
DISULFID:                C                                                C                                        

                       10        20        30        40        50        60        70        80        90     
AA:            TARVTPRSSDNRQLLVCEASSPALEAPIKASFTVNVLFPPGPPVIEWPGLDEGHVRAGQSLELPCVARGGNPLATLQWLKNGQPVSTAWGTEHTQAVARS 300
PathogenicSAV:                                     P                  W        R    C                         T  C 
BenignSAV:                                     A                              R   Q                                
gnomAD_SAV:      SMITW TH  HSRL  VA LT  V      AMSL# L E# ILKC     WQ#WV RG Q RSM * C     QK  RS  L  RV*   RI T  CN
Conservation:  3426443349643363914163630153243347375687439271977511116356318281935169986747594854344442844311111738
SS_PSIPRED:    EEEE    HHH EEEEEEEE   EEEEEEEEEEEEEE      EEE      EEEE    EEEE EEE      EEEEEE  EE       EEEEE   E
SS_SPIDER3:    EEEEE   H    EEEEEEE       EEEEEEEEE       EEE    EEEEEE    EEEEEEEE      EEEEEE  EE       EEEEE   E
SS_PSSPRED:    EEEEE        EEEEEEE      EEEEEEEEEEE      EE       EEE    EEEEEEEEE      EEEEEE  EE       EEEEE  EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDD                                            DDD D        DD                          DDD        D
DISULFID:                      C                                               C                                   

                       10        20        30        40        50        60        70        80        90     
AA:            VLVMTVRPEDHGAQLSCEAHNSVSAGTQEHGITLQVTFPPSAIIILGSASQTENKNVTLSCVSKSSRPRVLLRWWLGWRQLLPMEETVMDGLHGGHISMS 400
PathogenicSAV:          N                             H      E  P               R##       V  W                     
BenignSAV:                                                                                        T       P        
gnomAD_SAV:     PM     KN  V  N K    M S     S  P AA  S         F A    MIV   R  RC QI  #  VSCW    V  I IHEPP S   T 
Conservation:  1716042436626163965171551044102226262539326244841240842242538364585828276999924581242232145248923539
SS_PSIPRED:    EEEEE  HHH   EEEEEEEE    EEEEEEEEEEEE   EEEEE   EEE     EEEEEEE       EEEEEE  EE      EEEE     EEEEE
SS_SPIDER3:    EEEEEE EHH   EEEEEEEE     EEEEEEEEEEEE  EEE E  EEEEE    EEEEEEE      EEEEEEE  EEE     EEEEE    EEEEE
SS_PSSPRED:    EEEEEEEE     EEEEEEEE      EEEEEEEEEE   EEEEE  EEEEE    EEEEEEE      EEEEEEE  EE      EEEE     EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                DDDDDDDD                                    DD                                         
DISULFID:                      C                                           C                                       
CARBOHYD:                                                             N                                            

                       10        20        30        40        50        60        70        80        90     
AA:            NLTFLARREDNGLTLTCEAFSEAFTKETFKKSLILNVKYPAQKLWIEGPPEGQKLRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRLPQESRRVHLG 500
PathogenicSAV:       W    C    F                            N             Q    Y                                   
BenignSAV:            Q                                      K                                                     
gnomAD_SAV:      IL VWW  D#VI IR TV  # I  SVR LF   I   T   C#KR   D  FWVA W S E   VRA  # C K*  #L    KL QS V WSL#  
Conservation:  8573143444556165798972693225322212616278556585535323104358315363945488581628293951415074343534501361
SS_PSIPRED:    EEEEEEE HHH EEEEEEEE     EEEEEEEEE EEE      EEE      EE     EEEEEEEEEEE   EEEEEE  EE           EEEEE
SS_SPIDER3:    EEEEEEEEH   EEEEEEEE     EEEEEEEEEE       EEEEE      EE     EEEEEEEEEEE   EEEEEE  EE           EE E 
SS_PSSPRED:    EEEEEEEEE   EEEEEEEE      HHHHEEEE  EE     EE       EEE    EEEEEEEEE        EEE   EE                
DO_DISOPRED3:                                                                                       DDDDDDD DD  DD 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    D                            D D       DDDDDDDDDD  
MODRES_P:                                     S                                                                    
DISULFID:                      C                                               C                                   
CARBOHYD:      N                                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SVEKSGSTFSRELVLVTGPSDNQAKFTCKAGQLSASTQLAVQFPPTNVTILANASALRPGDALNLTCVSVSSNPPVNLSWDKEGERLEGVAAPPRRAPFK 600
PathogenicSAV:                   S        F  V                          C        S R  N  Q          GR             
gnomAD_SAV:    GLKN #G  CQ  #P   S E    LS  TV P   MH E   L AK             G   F *A   G  #AKV# N K V    G DQ#W #  R
Conservation:  2221533245445142317587261649353134523251845453232623111133273132838153578714242713322361522012125165
SS_PSIPRED:    EEEE    EEEEEEE    HHH EEEEEE   EEEEEEEEEE                    EEEEEEE EE    EEEEEE  EE              
SS_SPIDER3:    EEE    EEEEEEEE        EEEEEE  E EEEEEEEEEE   EE E    EEE     EEEEEE  EEE   EEEEEE  EE              
SS_PSSPRED:    EEEE    EEEEEEE        EEEEEEE  EEEEEEEEEE            EE     EEEEEEEE         EEE    E              
DO_DISOPRED3:                                                                                            DDDD D DDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DD          D             DD                                                  D DDDDD DDDDDDDD      
DISULFID:                                 C                                      C                                 
CARBOHYD:                                                    N     N          N            N                       

                       10        20        30        40        50        60        70        80        90     
AA:            GSAAARSVLLQVSSRDHGQRVTCRAHSAELRETVSSFYRLNVLYRPEFLGEQVLVVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILS 700
PathogenicSAV: R      I Q            F                   P                             K       C                   
gnomAD_SAV:    A T   RI      G RD HL F  N  #F# AMC  C  SLR    L   *   LIS   SK   L  M SK  S    C  C      # S Q L M 
Conservation:  6223132525143614533554925471391633645526476469783235201523293425244435676813235162425326133223542312
SS_PSIPRED:         EEEEEE   HHH EEEEEEEE      EEEEEEEEEEE           EEEEE    EEEEEEEEE     EEEEEE  EE       EEEEE 
SS_SPIDER3:        EEEEEEE   HHH EEEEEEEE     EEEEEEEEEEEEE         E EEEE    EEEEEEE      EEEEEEE  EE       EEEE  
SS_PSSPRED:         EEEEEEE       EEEEEEE HHH   EEEEEEEEEEE           EEEEE  EEEEEEEEE      EEEEEE  EE       EEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                         DDDD                                                                          
DISULFID:                            C                                                                             
CARBOHYD:                                                                                     N                    

                       10        20        30        40        50        60        70        80        90     
AA:            SGALHLWNVTRADDGLYQLHCQNSEGTAEARLRLDVHYAPTIRALQDPTEVNVGGSVDIVCTVDANPILPGMFNWERLGEDEEDQSLDDMEKISRGPTGR 800
PathogenicSAV:         G              C           M  V  TC                                                         
BenignSAV:                                                                          L                              
gnomAD_SAV:    # TVY     CS #    #R R C   S V  Q#E Y     H    T G ##W# M TI I YV STFT      T   NK N   #  D  A   AEC
Conservation:  3137253866625290925192926802241429474745364231454174372255527266768321357273344652342323223103341351
SS_PSIPRED:      EEEE    HHH EEEEEEEEE  EEEEEEEEEEEEE  EEEEE   EEE     EEEEEEEEEE     EEEEEE               EEE    E
SS_SPIDER3:      EEEEE   HHH EEEEEEEE   EEEEEEEEEEEEE  EEE     EEEE    EEEEEEEEE      EEEEEE  EE          EEEE   EE
SS_PSSPRED:      EEEEEE       EEEEEEE     EEEEEEEEEEE  EEEE    EEEE    EEEEEEEEE       EEEE                EEE    E
DO_DISOPRED3:                                                                                   DDDDDDD DD         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                  DDD DDDDDDDDDDDD     
DISULFID:                                                                  C                                       
CARBOHYD:             N                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            LRIHHAKLAQAGAYQCIVDNGVAPPARRLLRLVVRFAPQVEHPTPLTKVAAAGDSTSSATLHCRARGVPNIVFTWTKNGVPLDLQDPRYTEHTYHQGGVH 900
PathogenicSAV:  #   D            V  M        CP F                                                                  
BenignSAV:      Q                                                                                                  
gnomAD_SAV:     W PRD    G T    M   MV   *W  CP F  S RGK A T  TM      N   A   H QD  SVA   A DE   N    T M  A  ESV  
Conservation:  7251062333571749254735243532234976452825257235298743896331615293547693618394853224642468726131333137
SS_PSIPRED:    EEE    HHH EEEEEEEE       EEEEEEEEEE  EE       EEEE       EEEEEEEEEE   EEEEEE  EE        EEEEEEE  EE
SS_SPIDER3:    EEE    HHH EEEEEEEE        EEEEEEEEE  EEE     EEEEEE      EEEEEEE     EEEEEEE  EEE      EEEEEEEE  EE
SS_PSSPRED:    EEEE   HHH  EEEEEEE        EEEEEEEE   EEE      EEEEE      EEEEEEEE    EEEEEEE  EE        EEEEEE    E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                               DDDDDDDD       D                         DDD  D         
DISULFID:                     C                                              C                                     

                       10        20        30        40        50        60        70        80        90     
AA:            SSLLTIANVSAAQDYALFTCTATNALGSDQTNIQLVSISRPDPPSGLKVVSLTPHSVGLEWKPGFDGGLPQRFCIRYEALGTPGFHYVDVVPPQATTFTL 1000
PathogenicSAV:          P T                                            #          C       S                        
BenignSAV:                                                                                               L         
gnomAD_SAV:    NNH     #P T#  TF   A  KT  L# I F   N  # E     N        LE    L  E V L#S  VS   R      SA  L L  AI M 
Conservation:  3836353878533996493847292692713478658653977843642332432444849347969863938366833223263373765821443676
SS_PSIPRED:    EEEEEEE    HHH EEEEEEEEE  EEEEEEEEEEE          EEEEEE  EEEEEEE         EEEEEEEE       EEEEE     EEEE
SS_SPIDER3:    EEEEEEE       EEEEEEEEE   EEEEEEEEEEE          EEEEEE  EEEEEEE          EEEEEEE    E EEEEEE     EEEE
SS_PSSPRED:    EEEEEEEE      EEEEEEEEEE    EEEEEEEEEE         EEEEE   EEEEEEE          EEEEEEE       EEEE     EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                   DDDDDD       DDDDD                                                  
DISULFID:                         C                                                                                
CARBOHYD:             N                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            TGLQPSTRYRVWLLASNALGDSGLADKGTQLPITTPGLHQPSGEPEDQLPTEPPSGPSGLPLLPVLFALGGLLLLSNASCVGGVLWQRRLRRLAEGISEK 1100
PathogenicSAV:                    V                                                                                
BenignSAV:                                                                                 S                       
gnomAD_SAV:    #   S I * I    T T VNT     # *FS A A  Q  YRK  G   A  S  LL      #P TPA      S FS RRF   WGR S   D    
Conservation:  4492318294556482734879233222315255822103551101120211011211123232312343434433423533334132734332211123
STMI:                                                                 MMMMMMMMMMMMMMMMMMMMM                        
SS_PSIPRED:    E   HH  EEEEEEEEE            EEEEE                              EEEEE  EEEE    EEEEEEEHHHHHHH      H
SS_SPIDER3:    E       EEEEEEEEE          EEEEEEE                              EEEEE  EEEE     EE EEEEEEE E    E EE
SS_PSSPRED:           EEEEEEEEEE           EEEEE                               HHHEE  EEEEE   EEEEEEEEEHHHHHHH     
DO_DISOPRED3:                                      DDDDDDDDDDDDDDDDDDDDDDDD                              DDDDDDDDDD
DO_SPOTD:                                               DDDDDDD                                                    
DO_IUPRED2A:                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD                                  DDDDD
MODRES_P:                                                                                                       S  

                       10        20        30        40        50        60        70        80        90     
AA:            TEAGSEEDRVRNEYEESQWTGERDTQSSTVSTTEAEPYYRSLRDFSPQLPPTQEEVSYSRGFTGEDEDMAFPGHLYDEVERTYPPSGAWGPLYDEVQMGP 1200
PathogenicSAV:                             P          C                    V                                       
BenignSAV:                                            S                                                            
gnomAD_SAV:    #   L   *   QN   K   KQN    PFGI    L  SA K L T*  LM   MP  Q     E      VY N   D MSR#  # EA     H A#
Conservation:  1114213121262832431331233355233321133462512241426153272011124114101011211517464532412122122230122101
SS_PSIPRED:    H  EEEEEEEEE   EEEEEEEEEE    EE       EE              EEE                                           
SS_SPIDER3:       EEEEEEEE    EEEEEEEE              EEE HHH                               E  E                     
SS_PSSPRED:         EEEEEE          EEE                                                                            
DO_DISOPRED3:  DD DDD        DDDDDDDDDDDDDDDDDDDDDDD DDDDD  DDDDDDDDDDDDDDDDD                       D   DDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDD DDD DDDDDDDDDDDD    DDDDDDDDDD  DD   DDDDD D D      
MODRES_P:      T   S                                                                                       Y       

                       10        20        30        40 
AA:            WDLHWPEDTYQDPRGIYDQVAGDLDTLEPDSLPFELRGHLV 1241
BenignSAV:                     D                        
gnomAD_SAV:    L  Q    ASEE #R D  M R    V T     K  EL A
Conservation:  01003200122122324416412111011214774548333
SS_PSIPRED:                    EEEE                     
SS_SPIDER3:            EEE    EEEEE              EE    E
SS_PSSPRED:                   EEEE                E     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDBB 
DO_SPOTD:                                               
DO_IUPRED2A:     DDDD  D  DDDDDDDDDDDD D DDD