O60663  LMX1B_HUMAN

Gene name: LMX1B   Description: LIM homeobox transcription factor 1-beta

Length: 402    GTS: 1.08e-06   GTS percentile: 0.259     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 43      BenignSAV: 5      gnomAD_SAV: 169      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRK 100
PathogenicSAV:                                                           #                G#  RW #  #              
BenignSAV:           A                                                                   F                         
gnomAD_SAV:    V   R AK   S      KN* E   CVNI   V  L#L#      AC Y  AV   S   T F        Q F   K    V#               
Conservation:  1111111111111111111111111111110000111111111111111011002122101111221221101111010110211100120012102101
SS_PSIPRED:          HHHHHHH      HHHHHH    HHH                                          EE HH    HH       EEEEE  E
SS_SPIDER3:          HHHHH          HHH     HHH                      EE     E HHHHEEEE     HHH HEHHH   E  EEEEEE  E
SS_PSSPRED:           HHHHH        HHHHHH                                     HHHHHHHHH HHHHHHHHHHHHHH      EEEE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                    
DO_IUPRED2A:   DD                                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            LYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAK 200
PathogenicSAV:  CW  G           #                  Y  Y  S  #                  W                                   
BenignSAV:                                                                                   M                     
gnomAD_SAV:       R  H  I VVM NS  K  TS K  IQV   M        WM  Q  #   K L    H       K # E PT MN #KAN M GK    NR L  
Conservation:  1001011106623271461426243536434221454427836348223733963576435586631472242243112321142433432331112113
SS_PSIPRED:    EE HHHHHHHH HH      EE HHHHHHH    EEEE   EEE          EEEEE  EEEE   HHHHHHHH                        
SS_SPIDER3:    EE HHHHHHHH HH         HHHEEEEE    EEE EEE      E     EEEEE  EEEE     HHH                           
SS_PSSPRED:    H HHHHHHHHHHHHH        HHHHHHHH   EEEE   EEE         EEEEE    EE     HHHH                           
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                              D   DDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSS 300
PathogenicSAV:                       Q            PP   P    #  #  PV       CM  ##  K                               
BenignSAV:              R                                                                                          
gnomAD_SAV:     PDR N S R     LQ A        #          #I T      *         G H                      H #     LRCH    N
Conservation:  1100022311221262456998889865276945555454535356755524333245334555366454344542333543232335122233132232
SS_PSIPRED:                               HHHHHHHHHHHH      HHHHHHHHHHH   HHHHHEEE   HHHHHHHHHHHHHHHHH HHHH        
SS_SPIDER3:                               HHHHHHHHHHHH      HHHHHHHHHHH     HEHHHHHH HHHHHHHHHHHHHHHHHH  H         
SS_PSSPRED:                               HHHHHHHHHHH       HHHHHHHHHHH     EEEEEE    HHHHHHHHHHHHHHHHHHHH         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDD       D       DDD DDDD                    DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:                        PKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLA                      

                       10        20        30        40        50        60        70        80        90     
AA:            RMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYF 400
BenignSAV:                                                                N                                        
gnomAD_SAV:    #  #V   CML   #H   MTV H   D GN  HH  ML     GYI H    FV #  N N      R   VS# YM    DHM  A NW    KN#  
Conservation:  2242421332231221233314431122113354335697554556445220223314252212221223442121313233232445453745563553
SS_PSIPRED:                   HHH                                                                                  
SS_SPIDER3:                        H                                                                   HHHHH       
SS_PSSPRED:                    HHHH H                                                                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDD   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D     D  D             D                

                 
AA:            AS 402
gnomAD_SAV:    T 
Conservation:  22
SS_PSIPRED:      
SS_SPIDER3:      
SS_PSSPRED:      
DO_DISOPRED3:   D
DO_SPOTD:      DD
DO_IUPRED2A: